Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031592.t1 | XP_003607607.1 | 99.2 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.00E+00 | 1731.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031592.t1 | Q9LMI0 | 78.0 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0e+00 | 1383.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031592.t1 | G7JCN5 | 99.2 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0e+00 | 1731.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75183 | MS.gene031592 | PPI |
| MS.gene95835 | MS.gene031592 | PPI |
| MS.gene012447 | MS.gene031592 | PPI |
| MS.gene71778 | MS.gene031592 | PPI |
| MS.gene62674 | MS.gene031592 | PPI |
| MS.gene035660 | MS.gene031592 | PPI |
| MS.gene018379 | MS.gene031592 | PPI |
| MS.gene038603 | MS.gene031592 | PPI |
| MS.gene83030 | MS.gene031592 | PPI |
| MS.gene57938 | MS.gene031592 | PPI |
| MS.gene026499 | MS.gene031592 | PPI |
| MS.gene009143 | MS.gene031592 | PPI |
| MS.gene029463 | MS.gene031592 | PPI |
| MS.gene95324 | MS.gene031592 | PPI |
| MS.gene015639 | MS.gene031592 | PPI |
| MS.gene040931 | MS.gene031592 | PPI |
| MS.gene71003 | MS.gene031592 | PPI |
| MS.gene73417 | MS.gene031592 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031592.t1 | MTR_4g080160 | 99.187 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1776 |
| MS.gene031592.t1 | MTR_1g109620 | 65.299 | 853 | 285 | 3 | 1 | 851 | 1 | 844 | 0.0 | 1210 |
| MS.gene031592.t1 | MTR_1g032730 | 64.610 | 859 | 285 | 9 | 1 | 849 | 1 | 850 | 0.0 | 1164 |
| MS.gene031592.t1 | MTR_8g105740 | 63.944 | 857 | 292 | 7 | 1 | 849 | 1 | 848 | 0.0 | 1162 |
| MS.gene031592.t1 | MTR_8g063790 | 64.277 | 823 | 286 | 2 | 32 | 852 | 25 | 841 | 0.0 | 1137 |
| MS.gene031592.t1 | MTR_4g129270 | 58.756 | 788 | 313 | 6 | 67 | 848 | 57 | 838 | 0.0 | 978 |
| MS.gene031592.t1 | MTR_4g129270 | 59.227 | 699 | 277 | 5 | 67 | 759 | 57 | 753 | 0.0 | 881 |
| MS.gene031592.t1 | MTR_3g078210 | 54.860 | 751 | 336 | 2 | 90 | 838 | 3 | 752 | 0.0 | 853 |
| MS.gene031592.t1 | MTR_3g467030 | 48.744 | 597 | 278 | 3 | 68 | 664 | 1 | 569 | 0.0 | 570 |
| MS.gene031592.t1 | MTR_2g073260 | 33.865 | 753 | 438 | 19 | 67 | 799 | 124 | 836 | 8.75e-142 | 444 |
| MS.gene031592.t1 | MTR_0034s0170 | 33.822 | 751 | 438 | 19 | 67 | 797 | 85 | 796 | 1.44e-134 | 424 |
| MS.gene031592.t1 | MTR_8g087910 | 34.746 | 354 | 200 | 8 | 43 | 387 | 53 | 384 | 7.14e-68 | 231 |
| MS.gene031592.t1 | MTR_8g087930 | 30.332 | 422 | 247 | 12 | 395 | 799 | 11 | 402 | 2.45e-52 | 192 |
| MS.gene031592.t1 | MTR_3g076810 | 51.880 | 133 | 63 | 1 | 67 | 199 | 39 | 170 | 8.17e-42 | 150 |
| MS.gene031592.t1 | MTR_3g467040 | 49.558 | 113 | 57 | 0 | 488 | 600 | 110 | 222 | 2.75e-30 | 120 |
| MS.gene031592.t1 | MTR_3g467040 | 33.793 | 145 | 91 | 2 | 315 | 456 | 1 | 143 | 1.08e-20 | 92.4 |
| MS.gene031592.t1 | MTR_3g008500 | 28.521 | 284 | 158 | 12 | 588 | 844 | 114 | 379 | 2.05e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031592.t1 | AT1G06410 | 78.026 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0 | 1382 |
| MS.gene031592.t1 | AT1G06410 | 78.026 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0 | 1382 |
| MS.gene031592.t1 | AT1G06410 | 78.026 | 851 | 176 | 3 | 1 | 851 | 1 | 840 | 0.0 | 1382 |
| MS.gene031592.t1 | AT4G17770 | 62.818 | 866 | 304 | 6 | 1 | 861 | 1 | 853 | 0.0 | 1171 |
| MS.gene031592.t1 | AT4G17770 | 62.818 | 866 | 304 | 6 | 1 | 861 | 1 | 853 | 0.0 | 1171 |
| MS.gene031592.t1 | AT1G68020 | 62.673 | 868 | 292 | 6 | 1 | 849 | 1 | 855 | 0.0 | 1145 |
| MS.gene031592.t1 | AT1G68020 | 62.673 | 868 | 292 | 6 | 1 | 849 | 1 | 855 | 0.0 | 1145 |
| MS.gene031592.t1 | AT1G70290 | 60.660 | 849 | 318 | 4 | 1 | 846 | 1 | 836 | 0.0 | 1098 |
| MS.gene031592.t1 | AT1G23870 | 59.696 | 856 | 330 | 3 | 1 | 851 | 1 | 846 | 0.0 | 1094 |
| MS.gene031592.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene031592.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene031592.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene031592.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene031592.t1 | AT1G60140 | 60.539 | 854 | 328 | 2 | 1 | 852 | 1 | 847 | 0.0 | 1086 |
| MS.gene031592.t1 | AT2G18700 | 58.561 | 806 | 322 | 6 | 55 | 851 | 36 | 838 | 0.0 | 1010 |
| MS.gene031592.t1 | AT1G70290 | 57.008 | 849 | 311 | 5 | 1 | 846 | 1 | 798 | 0.0 | 1008 |
| MS.gene031592.t1 | AT1G60140 | 61.367 | 761 | 285 | 2 | 1 | 759 | 1 | 754 | 0.0 | 983 |
| MS.gene031592.t1 | AT1G68020 | 62.990 | 689 | 223 | 6 | 1 | 670 | 1 | 676 | 0.0 | 919 |
| MS.gene031592.t1 | AT1G16980 | 33.499 | 806 | 475 | 23 | 67 | 851 | 13 | 778 | 8.12e-143 | 443 |
| MS.gene031592.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene031592.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene031592.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene031592.t1 | AT1G78580 | 33.686 | 757 | 432 | 22 | 67 | 797 | 93 | 805 | 1.22e-136 | 430 |
| MS.gene031592.t1 | AT4G27550 | 31.598 | 826 | 479 | 22 | 67 | 850 | 5 | 786 | 2.38e-135 | 422 |
| MS.gene031592.t1 | AT4G27550 | 32.005 | 828 | 482 | 23 | 67 | 850 | 5 | 795 | 3.45e-135 | 422 |
| MS.gene031592.t1 | AT1G16980 | 35.105 | 621 | 353 | 18 | 67 | 677 | 13 | 593 | 1.53e-118 | 375 |
Find 221 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCGGAGGATGATTATATT+TGG | 0.168883 | 4.3:+29039618 | MS.gene031592:CDS |
| TGTGGTAATTGCTCTGATTT+TGG | 0.190443 | 4.3:+29041613 | MS.gene031592:CDS |
| AGGTATAAATTTGAAGATTC+TGG | 0.215594 | 4.3:+29040072 | MS.gene031592:CDS |
| CAAAGAGGTCATATCTCTTT+TGG | 0.226862 | 4.3:+29040864 | MS.gene031592:CDS |
| TTTGCTTGGACTCTTATTAA+TGG | 0.243265 | 4.3:-29040845 | None:intergenic |
| CCCGACCCCGATCCCATTGC+TGG | 0.248765 | 4.3:-29039062 | None:intergenic |
| ATTACAAGCATGCTCTTCTT+TGG | 0.251977 | 4.3:-29040436 | None:intergenic |
| AATAAATATGCTAGAATCTT+TGG | 0.258899 | 4.3:+29043113 | MS.gene031592:CDS |
| TCTGTATATAGTTTCATTAC+AGG | 0.258995 | 4.3:-29041655 | None:intergenic |
| AGGGATGCCGACCTTGGTTT+TGG | 0.277265 | 4.3:+29041733 | MS.gene031592:CDS |
| TTTGCTTGGTATTGACGATA+TGG | 0.281634 | 4.3:+29040039 | MS.gene031592:CDS |
| TTCGCATTGGAACTTGATTC+AGG | 0.291144 | 4.3:-29040409 | None:intergenic |
| ACAGCTCTTCCTTGCCATTT+GGG | 0.295677 | 4.3:-29040121 | None:intergenic |
| TCCCAGAAGCCAAATCTAAA+AGG | 0.296805 | 4.3:-29039034 | None:intergenic |
| CCAGCAATGGGATCGGGGTC+GGG | 0.301443 | 4.3:+29039062 | MS.gene031592:CDS |
| CAGCAATGGGATCGGGGTCG+GGG | 0.303867 | 4.3:+29039063 | MS.gene031592:CDS |
| AGATAATACTTTGCTTTACT+TGG | 0.315020 | 4.3:-29043072 | None:intergenic |
| GACGAGCATAATCGAAAGTA+TGG | 0.320887 | 4.3:-29039811 | None:intergenic |
| CTCTAGCAGGGTTAACTATC+TGG | 0.321636 | 4.3:-29040150 | None:intergenic |
| TTCTTTGCTATTACAGCTTA+AGG | 0.321784 | 4.3:+29039295 | MS.gene031592:CDS |
| GCTTCTGCAAAAGGCAATTA+TGG | 0.326836 | 4.3:+29039474 | MS.gene031592:CDS |
| AACAGCTCTTCCTTGCCATT+TGG | 0.326987 | 4.3:-29040122 | None:intergenic |
| TTGTAATATCAGAATTTATT+GGG | 0.327538 | 4.3:+29040452 | MS.gene031592:CDS |
| TTTAGTATCTCCTCCCTAAC+AGG | 0.334244 | 4.3:-29039758 | None:intergenic |
| CAATATATTCATAAGGAGTT+AGG | 0.335793 | 4.3:-29040363 | None:intergenic |
| CTTGTAATATCAGAATTTAT+TGG | 0.336765 | 4.3:+29040451 | MS.gene031592:CDS |
| TTACTAAATTCTGATATCAT+TGG | 0.338425 | 4.3:+29039785 | MS.gene031592:CDS |
| TATCTAGGATTGGAATATTA+CGG | 0.338808 | 4.3:+29039890 | MS.gene031592:CDS |
| CCCGGAGGATGATTATATTT+GGG | 0.339590 | 4.3:+29039619 | MS.gene031592:CDS |
| TGACCACTCTTTGCGGCAAC+AGG | 0.344178 | 4.3:-29041811 | None:intergenic |
| TATATAGGACTCTTCCTGTT+AGG | 0.344777 | 4.3:+29039744 | MS.gene031592:CDS |
| GCACTCATGACGTGGCTTAC+TGG | 0.351395 | 4.3:+29040611 | MS.gene031592:CDS |
| ACACTCAGCAAGGCTGTAAT+AGG | 0.352058 | 4.3:-29040308 | None:intergenic |
| GTGCTTTGGTTTGGCAATAC+AGG | 0.355182 | 4.3:+29041713 | MS.gene031592:CDS |
| ACTTTCCTTTCGTTCAATAC+TGG | 0.357028 | 4.3:-29041692 | None:intergenic |
| TTACAAGCATGCTCTTCTTT+GGG | 0.358274 | 4.3:-29040435 | None:intergenic |
| GTTTGTAGACAGGGAATATC+TGG | 0.365870 | 4.3:+29040385 | MS.gene031592:CDS |
| AAGTAAAGCAAAGTATTATC+TGG | 0.370428 | 4.3:+29043074 | MS.gene031592:CDS |
| TCACCATGCATAGAAGAATC+TGG | 0.371337 | 4.3:+29043153 | MS.gene031592:CDS |
| CTCTCCATCACTCATTGAAA+TGG | 0.371727 | 4.3:-29040551 | None:intergenic |
| GGATGGATTTCCAGAAGATA+TGG | 0.376566 | 4.3:+29039316 | MS.gene031592:CDS |
| TCCTGCTGCAGTCGTATGTT+GGG | 0.381549 | 4.3:+29039842 | MS.gene031592:CDS |
| AGATCATCTAGAAAGTGTTT+TGG | 0.381754 | 4.3:+29041780 | MS.gene031592:CDS |
| GGTTCATGATTACCATTTGA+TGG | 0.383452 | 4.3:+29039640 | MS.gene031592:CDS |
| TACAGAACCTCCATATCTTC+TGG | 0.384072 | 4.3:-29039326 | None:intergenic |
| AATTTCCCAGCAATGGGATC+GGG | 0.387783 | 4.3:+29039056 | MS.gene031592:CDS |
| TTCCATCATCGGAGATATAT+AGG | 0.388493 | 4.3:+29039729 | MS.gene031592:CDS |
| ATCTAGGATTGGAATATTAC+GGG | 0.399527 | 4.3:+29039891 | MS.gene031592:CDS |
| AGTTTCCCATTCACCGTCTT+GGG | 0.399757 | 4.3:-29041590 | None:intergenic |
| ACCATCATAGTCCAACAAAA+TGG | 0.400346 | 4.3:-29040803 | None:intergenic |
| TGAATATATTGTTTGTAGAC+AGG | 0.403035 | 4.3:+29040375 | MS.gene031592:CDS |
| CTTTGCGGCAACAGGCTCAT+TGG | 0.407919 | 4.3:-29041803 | None:intergenic |
| CAATGGGATCGGGGTCGGGG+AGG | 0.407950 | 4.3:+29039066 | MS.gene031592:CDS |
| TTCCTGCTGCAGTCGTATGT+TGG | 0.414477 | 4.3:+29039841 | MS.gene031592:CDS |
| TGAACGAAAGGAAAGTGCTT+TGG | 0.417964 | 4.3:+29041699 | MS.gene031592:CDS |
| AGCAGGATCAACAGAGTGTT+TGG | 0.419750 | 4.3:+29040223 | MS.gene031592:CDS |
| CTTCTTTGGGCTATTCGCAT+TGG | 0.422173 | 4.3:-29040422 | None:intergenic |
| GAAAGGAAAGTGCTTTGGTT+TGG | 0.425700 | 4.3:+29041704 | MS.gene031592:CDS |
| ATCGTCAATACCAAGCAAAA+TGG | 0.428223 | 4.3:-29040035 | None:intergenic |
| TAAAAGTTTGCCAAAACATC+AGG | 0.429012 | 4.3:-29039446 | None:intergenic |
| TTTATGATGGCTTCTGCAAA+AGG | 0.429950 | 4.3:+29039465 | MS.gene031592:CDS |
| CTCAGAGGTGGATGATGATC+AGG | 0.430895 | 4.3:+29039142 | MS.gene031592:CDS |
| GGTGGTCCCAAGACGGTGAA+TGG | 0.434178 | 4.3:+29041584 | MS.gene031592:intron |
| AAAGCTCTCAATTGATGCTA+TGG | 0.434592 | 4.3:+29040750 | MS.gene031592:CDS |
| AAACGCCTTCTTAGAAAAGT+TGG | 0.435169 | 4.3:-29039668 | None:intergenic |
| TTCTGGGAATTTCCCAGCAA+TGG | 0.440101 | 4.3:+29039049 | MS.gene031592:CDS |
| TCTGTATTTGCTTGCACGGT+TGG | 0.440122 | 4.3:+29043042 | MS.gene031592:CDS |
| GGTGTTCTCCATCGCTTAGT+GGG | 0.441085 | 4.3:+29040473 | MS.gene031592:CDS |
| TGGGGAATAGGTCTTAGCTT+TGG | 0.442950 | 4.3:+29040694 | MS.gene031592:CDS |
| GTTAACCCTGCTAGAGGTAA+AGG | 0.443791 | 4.3:+29040157 | MS.gene031592:CDS |
| GGGTGTTCTCCATCGCTTAG+TGG | 0.443816 | 4.3:+29040472 | MS.gene031592:CDS |
| GATCTGTCAATAAACACAAT+AGG | 0.448371 | 4.3:-29040262 | None:intergenic |
| TGATGTATCACAGTATTTGC+TGG | 0.449009 | 4.3:+29039391 | MS.gene031592:CDS |
| TGTATCCCTTTACCTCTAGC+AGG | 0.449011 | 4.3:-29040163 | None:intergenic |
| TGCGGCATGAAAAGCATTAT+CGG | 0.451086 | 4.3:+29040581 | MS.gene031592:CDS |
| GTGTTATTGTCACAGCTGTA+AGG | 0.453106 | 4.3:+29040329 | MS.gene031592:CDS |
| CTTGGAATTGCTGCAGAACA+TGG | 0.454255 | 4.3:+29040979 | MS.gene031592:CDS |
| GTATTAAGATCATGCCTGTT+GGG | 0.456048 | 4.3:+29039924 | MS.gene031592:CDS |
| GAACATAGGCTTCCCACAAA+TGG | 0.459768 | 4.3:-29039553 | None:intergenic |
| CCCAGCAATGGGATCGGGGT+CGG | 0.460165 | 4.3:+29039061 | MS.gene031592:CDS |
| TCTGGGAATTTCCCAGCAAT+GGG | 0.460266 | 4.3:+29039050 | MS.gene031592:CDS |
| GATAAACTGACCACTCTTTG+CGG | 0.461574 | 4.3:-29041818 | None:intergenic |
| TCAGGCAGTAAGTGTTTCTT+CGG | 0.462017 | 4.3:+29039160 | MS.gene031592:CDS |
| CATTGTTAGTGGACGGGGTA+GGG | 0.464339 | 4.3:+29040921 | MS.gene031592:CDS |
| TGCTGAAACAACACCCCAAA+TGG | 0.466478 | 4.3:+29040107 | MS.gene031592:CDS |
| TAAAAGGTTTGTATACGATC+TGG | 0.467408 | 4.3:-29039018 | None:intergenic |
| AAATTTGAAGATTCTGGCTA+TGG | 0.469132 | 4.3:+29040078 | MS.gene031592:CDS |
| CAGTCAAAGAGGGGTTATCT+AGG | 0.470100 | 4.3:+29039875 | MS.gene031592:CDS |
| GCAGTTGCTTCAACATTCCA+TGG | 0.470653 | 4.3:-29040511 | None:intergenic |
| CACCATGCATAGAAGAATCT+GGG | 0.476735 | 4.3:+29043154 | MS.gene031592:CDS |
| AATGGGATCGGGGTCGGGGA+GGG | 0.477370 | 4.3:+29039067 | MS.gene031592:CDS |
| ACCGCTTTGATCGCCATTTG+TGG | 0.477691 | 4.3:+29039540 | MS.gene031592:CDS |
| ACCCAAATATAATCATCCTC+CGG | 0.481751 | 4.3:-29039620 | None:intergenic |
| CGATCAGAAGAAATAGTTGA+CGG | 0.482348 | 4.3:-29039188 | None:intergenic |
| TGCTTCTGTATTTGCTTGCA+CGG | 0.482357 | 4.3:+29043038 | MS.gene031592:CDS |
| AAGTTTCCCATTCACCGTCT+TGG | 0.485112 | 4.3:-29041591 | None:intergenic |
| ATATAGGACTCTTCCTGTTA+GGG | 0.485478 | 4.3:+29039745 | MS.gene031592:CDS |
| CAGCTTGTTTGCCAGAACAT+AGG | 0.487233 | 4.3:-29039567 | None:intergenic |
| CCGAGGGTTATGAGTGTCCC+GGG | 0.488412 | 4.3:+29039113 | MS.gene031592:CDS |
| AGCAAATACAGAAGCATTGG+AGG | 0.488464 | 4.3:-29043031 | None:intergenic |
| TATATCTCCGATGATGGAAA+GGG | 0.489420 | 4.3:-29039725 | None:intergenic |
| CGACCCATGTGAATCCCAAC+AGG | 0.490514 | 4.3:-29039938 | None:intergenic |
| ACCCAACATACGACTGCAGC+AGG | 0.490840 | 4.3:-29039843 | None:intergenic |
| AATGACTGAAAGTGACAAAC+AGG | 0.491293 | 4.3:+29042921 | MS.gene031592:CDS |
| CCGCTTTGATCGCCATTTGT+GGG | 0.494408 | 4.3:+29039541 | MS.gene031592:CDS |
| GTCCTATATATCTCCGATGA+TGG | 0.496938 | 4.3:-29039731 | None:intergenic |
| GCCGAGGGTTATGAGTGTCC+CGG | 0.498721 | 4.3:+29039112 | MS.gene031592:CDS |
| AACTTTCTTCTATTTCAGAA+TGG | 0.500344 | 4.3:-29040198 | None:intergenic |
| TTTGTGGGAAGCCTATGTTC+TGG | 0.500908 | 4.3:+29039556 | MS.gene031592:CDS |
| CTACAAACAATATATTCATA+AGG | 0.502334 | 4.3:-29040370 | None:intergenic |
| GATATGGAGGTTCTGTATGT+TGG | 0.504909 | 4.3:+29039332 | MS.gene031592:CDS |
| GTAGGGATAGCTTAAGTGAA+TGG | 0.505507 | 4.3:+29040938 | MS.gene031592:CDS |
| TCCACCTCTGAGACAATCCC+CGG | 0.508028 | 4.3:-29039131 | None:intergenic |
| CCCAAATATAATCATCCTCC+GGG | 0.508556 | 4.3:-29039619 | None:intergenic |
| GCATAGCCCCTTTCCATCAT+CGG | 0.508587 | 4.3:+29039718 | MS.gene031592:CDS |
| GCTGACTTTGTCCTGTGTGT+TGG | 0.508603 | 4.3:+29042943 | MS.gene031592:CDS |
| AAAGAGGGGTTATCTAGGAT+TGG | 0.508611 | 4.3:+29039880 | MS.gene031592:CDS |
| GAATTTCCCAGCAATGGGAT+CGG | 0.509309 | 4.3:+29039055 | MS.gene031592:CDS |
| TGCTTTGGTTTGGCAATACA+GGG | 0.511440 | 4.3:+29041714 | MS.gene031592:CDS |
| GATGTCGGATGAGGAGTGTA+AGG | 0.511899 | 4.3:+29039979 | MS.gene031592:CDS |
| AACAGAGTGTTTGGACGACC+TGG | 0.514305 | 4.3:+29040232 | MS.gene031592:CDS |
| GAGCTCAAACAGCAATTTGA+AGG | 0.515176 | 4.3:+29040007 | MS.gene031592:CDS |
| CAGCTCTTCCTTGCCATTTG+GGG | 0.515782 | 4.3:-29040120 | None:intergenic |
| TTAACCCTGCTAGAGGTAAA+GGG | 0.516128 | 4.3:+29040158 | MS.gene031592:CDS |
| AAGAACGAAGGCGGATGCCG+AGG | 0.520114 | 4.3:+29039096 | MS.gene031592:CDS |
| CAATACAGGGATGCCGACCT+TGG | 0.520176 | 4.3:+29041727 | MS.gene031592:CDS |
| TCATTGTTAGTGGACGGGGT+AGG | 0.521156 | 4.3:+29040920 | MS.gene031592:CDS |
| AGACATGGAGAGGGCTTGCA+CGG | 0.522594 | 4.3:+29040651 | MS.gene031592:CDS |
| ATATATCTCCGATGATGGAA+AGG | 0.524519 | 4.3:-29039726 | None:intergenic |
| AGAGATATGACCTCTTTGCT+TGG | 0.525145 | 4.3:-29040859 | None:intergenic |
| GCAAGCAAATACAGAAGCAT+TGG | 0.525460 | 4.3:-29043034 | None:intergenic |
| GTGGTCCCAAGACGGTGAAT+GGG | 0.525548 | 4.3:+29041585 | MS.gene031592:CDS |
| TTACAAGAGGGCAAAGAGTA+GGG | 0.528130 | 4.3:+29040780 | MS.gene031592:CDS |
| TATTGTGTTTATTGACAGAT+CGG | 0.528425 | 4.3:+29040264 | MS.gene031592:CDS |
| CTGTTGGGATTCACATGGGT+CGG | 0.529805 | 4.3:+29039939 | MS.gene031592:CDS |
| TTGCTATTACAGCTTAAGGA+TGG | 0.530659 | 4.3:+29039299 | MS.gene031592:CDS |
| AGAACGAAGGCGGATGCCGA+GGG | 0.530953 | 4.3:+29039097 | MS.gene031592:CDS |
| TAGCTTTGGATTTAGAGTTG+TGG | 0.534487 | 4.3:+29040708 | MS.gene031592:CDS |
| CTTACAAGAGGGCAAAGAGT+AGG | 0.537232 | 4.3:+29040779 | MS.gene031592:CDS |
| GATACATCATCTTGTTCAGC+GGG | 0.537461 | 4.3:-29039377 | None:intergenic |
| ACATCAGGAGGCAGAAAAGT+GGG | 0.540834 | 4.3:-29039431 | None:intergenic |
| GGGCTATCCGTGTCAATCCA+TGG | 0.541240 | 4.3:+29040494 | MS.gene031592:CDS |
| ACGTAGTTTCTTGCAAGACA+TGG | 0.542110 | 4.3:+29040636 | MS.gene031592:CDS |
| AAGTTGGCAGCACCATCAAA+TGG | 0.542653 | 4.3:-29039652 | None:intergenic |
| GAATATATTGTTTGTAGACA+GGG | 0.549934 | 4.3:+29040376 | MS.gene031592:CDS |
| TGTTATGAGGATGTCGGATG+AGG | 0.553523 | 4.3:+29039970 | MS.gene031592:CDS |
| AGTATTAAGATCATGCCTGT+TGG | 0.555153 | 4.3:+29039923 | MS.gene031592:CDS |
| AAATAGAAGAAAGTTGCAGC+AGG | 0.559745 | 4.3:+29040206 | MS.gene031592:CDS |
| CCGACCCCGATCCCATTGCT+GGG | 0.564119 | 4.3:-29039061 | None:intergenic |
| AAACAAGCTGTTCTTTCAGA+AGG | 0.565229 | 4.3:+29039580 | MS.gene031592:CDS |
| CCCGGGACACTCATAACCCT+CGG | 0.570549 | 4.3:-29039113 | None:intergenic |
| ATTGTCACAGCTGTAAGGGA+TGG | 0.572045 | 4.3:+29040334 | MS.gene031592:CDS |
| TCCCCAGATTCTTCTATGCA+TGG | 0.572909 | 4.3:-29043156 | None:intergenic |
| AACATCAGGAGGCAGAAAAG+TGG | 0.573267 | 4.3:-29039432 | None:intergenic |
| GAAGCCATTTCAATGAGTGA+TGG | 0.574264 | 4.3:+29040547 | MS.gene031592:CDS |
| GAGCCTGTTGCCGCAAAGAG+TGG | 0.574335 | 4.3:+29041808 | MS.gene031592:CDS |
| TTGTCACAGCTGTAAGGGAT+GGG | 0.578214 | 4.3:+29040335 | MS.gene031592:CDS |
| CCCGGGGATTGTCTCAGAGG+TGG | 0.578255 | 4.3:+29039130 | MS.gene031592:CDS |
| TCTAGAGTATCAGTCAAAGA+GGG | 0.581200 | 4.3:+29039865 | MS.gene031592:CDS |
| TATCGTTGAAGTGAAGCCCC+AGG | 0.581315 | 4.3:+29041837 | MS.gene031592:CDS |
| GCATTGCAGGATGTGAGCAA+AGG | 0.581846 | 4.3:+29042871 | MS.gene031592:intron |
| CATGCCTGTTGGGATTCACA+TGG | 0.583402 | 4.3:+29039934 | MS.gene031592:CDS |
| GTCGGATTGAATCTGTTATG+AGG | 0.584194 | 4.3:+29039957 | MS.gene031592:CDS |
| CAGTCAAGTTTGGATTCAAG+AGG | 0.585127 | 4.3:-29043181 | None:intergenic |
| TGGTTCCAGTATTGAACGAA+AGG | 0.595735 | 4.3:+29041687 | MS.gene031592:CDS |
| CTATGGTTTCAGCTTACAAG+AGG | 0.596832 | 4.3:+29040767 | MS.gene031592:CDS |
| AGAAAAGAGAGGACAACAAA+GGG | 0.596911 | 4.3:+29039249 | MS.gene031592:CDS |
| AAGAAAAGAGAGGACAACAA+AGG | 0.597247 | 4.3:+29039248 | MS.gene031592:CDS |
| GTCTAGAGTATCAGTCAAAG+AGG | 0.599688 | 4.3:+29039864 | MS.gene031592:CDS |
| AGAAGATCCAAAACCAAGGT+CGG | 0.600676 | 4.3:-29041740 | None:intergenic |
| ATTTCCCAGCAATGGGATCG+GGG | 0.601478 | 4.3:+29039057 | MS.gene031592:CDS |
| CAACATTCCATGGATTGACA+CGG | 0.605906 | 4.3:-29040501 | None:intergenic |
| CTATATACAGAGGCAACTGA+TGG | 0.609983 | 4.3:+29041667 | MS.gene031592:CDS |
| CGGATAGCCCCACTAAGCGA+TGG | 0.610821 | 4.3:-29040481 | None:intergenic |
| TAATAAGAGTCCAAGCAAAG+AGG | 0.616472 | 4.3:+29040849 | MS.gene031592:CDS |
| TGTCCCGGGGATTGTCTCAG+AGG | 0.616643 | 4.3:+29039127 | MS.gene031592:CDS |
| GTATCCCTTTACCTCTAGCA+GGG | 0.618579 | 4.3:-29040162 | None:intergenic |
| TGACAATAACACACTCAGCA+AGG | 0.622584 | 4.3:-29040318 | None:intergenic |
| GGATGAGGAGTGTAAGGCAA+GGG | 0.623073 | 4.3:+29039985 | MS.gene031592:CDS |
| CAGATAGTTAACCCTGCTAG+AGG | 0.623112 | 4.3:+29040151 | MS.gene031592:CDS |
| TAGTTAGTAGTGCAATCTCA+AGG | 0.623819 | 4.3:+29042998 | MS.gene031592:CDS |
| CAGAACATGGATACTTCTTG+AGG | 0.624436 | 4.3:+29040992 | MS.gene031592:CDS |
| AAACAACACCCCAAATGGCA+AGG | 0.628534 | 4.3:+29040112 | MS.gene031592:CDS |
| TTTCTTGCAAGACATGGAGA+GGG | 0.628667 | 4.3:+29040642 | MS.gene031592:CDS |
| GACGGTGAATGGGAAACTTG+TGG | 0.631275 | 4.3:+29041595 | MS.gene031592:CDS |
| GTGATGGAGAGAAGCAGTTG+CGG | 0.631761 | 4.3:+29040563 | MS.gene031592:CDS |
| GTGTTCTCCATCGCTTAGTG+GGG | 0.632837 | 4.3:+29040474 | MS.gene031592:CDS |
| GTATGTCAGCACTCATGACG+TGG | 0.632870 | 4.3:+29040603 | MS.gene031592:CDS |
| ATCTGTCATCACCAACACAC+AGG | 0.635325 | 4.3:-29042954 | None:intergenic |
| TGGATTTCCAGAAGATATGG+AGG | 0.636676 | 4.3:+29039319 | MS.gene031592:CDS |
| TAGGACTCTTCCTGTTAGGG+AGG | 0.637903 | 4.3:+29039748 | MS.gene031592:CDS |
| AAAGAGAGGACAACAAAGGG+TGG | 0.638553 | 4.3:+29039252 | MS.gene031592:CDS |
| CGGATGAGGAGTGTAAGGCA+AGG | 0.638820 | 4.3:+29039984 | MS.gene031592:CDS |
| TTTGAAAGCTAAGAAAAGAG+AGG | 0.639677 | 4.3:+29039238 | MS.gene031592:CDS |
| GTTTCTTGCAAGACATGGAG+AGG | 0.640852 | 4.3:+29040641 | MS.gene031592:CDS |
| AAGTTTGCCAAAACATCAGG+AGG | 0.642149 | 4.3:-29039443 | None:intergenic |
| ATGCCTGTTGGGATTCACAT+GGG | 0.644963 | 4.3:+29039935 | MS.gene031592:CDS |
| GGTAGTTGAAATAATAAACC+CGG | 0.646249 | 4.3:+29039601 | MS.gene031592:CDS |
| AACACAATAGGTTCATAACC+AGG | 0.652850 | 4.3:-29040250 | None:intergenic |
| CATCAGGAGGCAGAAAAGTG+GGG | 0.652893 | 4.3:-29039430 | None:intergenic |
| GAATGTTGAAGCAACTGCGG+AGG | 0.653258 | 4.3:+29040516 | MS.gene031592:CDS |
| TGATACATCATCTTGTTCAG+CGG | 0.658366 | 4.3:-29039378 | None:intergenic |
| ATATCTCCGATGATGGAAAG+GGG | 0.659124 | 4.3:-29039724 | None:intergenic |
| CCACCTCTGAGACAATCCCC+GGG | 0.659546 | 4.3:-29039130 | None:intergenic |
| TGTTATTGTCACAGCTGTAA+GGG | 0.659939 | 4.3:+29040330 | MS.gene031592:CDS |
| TGAATCTGTTATGAGGATGT+CGG | 0.662042 | 4.3:+29039964 | MS.gene031592:CDS |
| ACAAATGGCGATCAAAGCGG+TGG | 0.668272 | 4.3:-29039538 | None:intergenic |
| ACCATGCATAGAAGAATCTG+GGG | 0.671869 | 4.3:+29043155 | MS.gene031592:CDS |
| TATGGTTTCAGCTTACAAGA+GGG | 0.681078 | 4.3:+29040768 | MS.gene031592:CDS |
| TGTAATGAAACTATATACAG+AGG | 0.682097 | 4.3:+29041657 | MS.gene031592:CDS |
| GGAGGGAGTTTAAAGAACGA+AGG | 0.685276 | 4.3:+29039084 | MS.gene031592:CDS |
| CTAGAGTATCAGTCAAAGAG+GGG | 0.688713 | 4.3:+29039866 | MS.gene031592:CDS |
| ATGGAATGTTGAAGCAACTG+CGG | 0.690516 | 4.3:+29040513 | MS.gene031592:CDS |
| TAGGATTGGAATATTACGGG+AGG | 0.692571 | 4.3:+29039894 | MS.gene031592:CDS |
| CGAGGGTTATGAGTGTCCCG+GGG | 0.699920 | 4.3:+29039114 | MS.gene031592:CDS |
| GGGAGTTTAAAGAACGAAGG+CGG | 0.701696 | 4.3:+29039087 | MS.gene031592:CDS |
| CCCACAAATGGCGATCAAAG+CGG | 0.706904 | 4.3:-29039541 | None:intergenic |
| TGGTGATGACAGATCAGATG+AGG | 0.713489 | 4.3:+29042963 | MS.gene031592:CDS |
| TGTGAGCAAAGGCTTAGTTG+CGG | 0.713566 | 4.3:+29042882 | MS.gene031592:CDS |
| CCTGAGAAGATCCAAAACCA+AGG | 0.716480 | 4.3:-29041744 | None:intergenic |
| AGTTGAAATAATAAACCCGG+AGG | 0.724497 | 4.3:+29039604 | MS.gene031592:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTGAAAATAATATTTT+AGG | + | chr4.3:29041086-29041105 | MS.gene031592:intron | 10.0% |
| !! | TAAATTAAAATTCATGTGTA+TGG | + | chr4.3:29041273-29041292 | MS.gene031592:intron | 15.0% |
| !! | TTAAAATTGAAAACAGAAAA+TGG | - | chr4.3:29042039-29042058 | None:intergenic | 15.0% |
| !! | TTGTAATATCAGAATTTATT+GGG | + | chr4.3:29040452-29040471 | MS.gene031592:CDS | 15.0% |
| !!! | AAATTTCTGTTCTAATTTTT+TGG | + | chr4.3:29042620-29042639 | MS.gene031592:intron | 15.0% |
| !!! | AACTTTTTAAAATGAAAACA+AGG | - | chr4.3:29042076-29042095 | None:intergenic | 15.0% |
| !!! | TTGTTTTTACCATATAATTT+TGG | + | chr4.3:29042764-29042783 | MS.gene031592:intron | 15.0% |
| !! | AATAAATATGCTAGAATCTT+TGG | + | chr4.3:29043113-29043132 | MS.gene031592:CDS | 20.0% |
| !! | CTACAAACAATATATTCATA+AGG | - | chr4.3:29040373-29040392 | None:intergenic | 20.0% |
| !! | CTTGTAATATCAGAATTTAT+TGG | + | chr4.3:29040451-29040470 | MS.gene031592:CDS | 20.0% |
| !! | TTACTAAATTCTGATATCAT+TGG | + | chr4.3:29039785-29039804 | MS.gene031592:CDS | 20.0% |
| !!! | AAATCAAATTGCTATTTAAC+AGG | - | chr4.3:29042244-29042263 | None:intergenic | 20.0% |
| !!! | AACAATGAAAACAACATTTT+TGG | - | chr4.3:29040908-29040927 | None:intergenic | 20.0% |
| !!! | ACAATGAAAACAACATTTTT+GGG | - | chr4.3:29040907-29040926 | None:intergenic | 20.0% |
| !!! | GTTCTCTTCTTTTTATAATT+TGG | + | chr4.3:29041532-29041551 | MS.gene031592:intron | 20.0% |
| !!! | TGGAACATTTTCTTATTAAA+TGG | - | chr4.3:29042533-29042552 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTTTCTACCA+TGG | + | chr4.3:29042507-29042526 | MS.gene031592:intron | 20.0% |
| ! | AAATTAGAACAGAAATTTGC+AGG | - | chr4.3:29042618-29042637 | None:intergenic | 25.0% |
| ! | AACTTTCTTCTATTTCAGAA+TGG | - | chr4.3:29040201-29040220 | None:intergenic | 25.0% |
| ! | AATATGTACAGAAATCCAAA+AGG | + | chr4.3:29042185-29042204 | MS.gene031592:intron | 25.0% |
| ! | AGATAATACTTTGCTTTACT+TGG | - | chr4.3:29043075-29043094 | None:intergenic | 25.0% |
| ! | AGCTTAGATAGCAATATTAA+GGG | + | chr4.3:29042001-29042020 | MS.gene031592:intron | 25.0% |
| ! | AGGTATAAATTTGAAGATTC+TGG | + | chr4.3:29040072-29040091 | MS.gene031592:CDS | 25.0% |
| ! | ATATCAAGAAAGTGAACATT+TGG | - | chr4.3:29041500-29041519 | None:intergenic | 25.0% |
| ! | CAATATATTCATAAGGAGTT+AGG | - | chr4.3:29040366-29040385 | None:intergenic | 25.0% |
| ! | GAATATATTGTTTGTAGACA+GGG | + | chr4.3:29040376-29040395 | MS.gene031592:CDS | 25.0% |
| ! | GTGTTAAAGCCAAAATTATA+TGG | - | chr4.3:29042776-29042795 | None:intergenic | 25.0% |
| ! | TAGAGAAATTGTATATACCT+GGG | - | chr4.3:29041857-29041876 | None:intergenic | 25.0% |
| ! | TATCAAGAAAGTGAACATTT+GGG | - | chr4.3:29041499-29041518 | None:intergenic | 25.0% |
| ! | TATTGTGTTTATTGACAGAT+CGG | + | chr4.3:29040264-29040283 | MS.gene031592:CDS | 25.0% |
| ! | TCAAAGTTAACAATAGGAAA+TGG | - | chr4.3:29042118-29042137 | None:intergenic | 25.0% |
| ! | TCTGTATATAGTTTCATTAC+AGG | - | chr4.3:29041658-29041677 | None:intergenic | 25.0% |
| ! | TGAATATATTGTTTGTAGAC+AGG | + | chr4.3:29040375-29040394 | MS.gene031592:CDS | 25.0% |
| ! | TGTAATGAAACTATATACAG+AGG | + | chr4.3:29041657-29041676 | MS.gene031592:CDS | 25.0% |
| ! | TGTTATATCTTACGTAAAGT+TGG | - | chr4.3:29042467-29042486 | None:intergenic | 25.0% |
| ! | TTATAAAAAGAAGAGAACAC+AGG | - | chr4.3:29041530-29041549 | None:intergenic | 25.0% |
| !! | AAGTAAAGCAAAGTATTATC+TGG | + | chr4.3:29043074-29043093 | MS.gene031592:CDS | 25.0% |
| !! | ATTTTCTTATTAAATGGCCA+TGG | - | chr4.3:29042527-29042546 | None:intergenic | 25.0% |
| !! | CAATGAAAACAACATTTTTG+GGG | - | chr4.3:29040906-29040925 | None:intergenic | 25.0% |
| !! | CTGTTTTCAAAGTTAACAAT+AGG | - | chr4.3:29042124-29042143 | None:intergenic | 25.0% |
| !! | GTATACAAACCTTTTAGATT+TGG | + | chr4.3:29039025-29039044 | MS.gene031592:CDS | 25.0% |
| !! | TAACAATTTGAGCATTTTTC+AGG | + | chr4.3:29041563-29041582 | MS.gene031592:intron | 25.0% |
| !! | TATCTAGGATTGGAATATTA+CGG | + | chr4.3:29039890-29039909 | MS.gene031592:CDS | 25.0% |
| !!! | AAAGTGTTTTAAAGTCCAAT+TGG | + | chr4.3:29041232-29041251 | MS.gene031592:intron | 25.0% |
| !!! | AATGTTGTTTTCATTGTTAG+TGG | + | chr4.3:29040910-29040929 | MS.gene031592:CDS | 25.0% |
| !!! | AGTTTTTTAGAGAAGCTTTT+TGG | + | chr4.3:29042694-29042713 | MS.gene031592:intron | 25.0% |
| !!! | ATTGAGAGCTTTTTAAAGTT+AGG | - | chr4.3:29040742-29040761 | None:intergenic | 25.0% |
| !!! | TAGCTTTAGATAACATTGTT+AGG | - | chr4.3:29042414-29042433 | None:intergenic | 25.0% |
| !!! | TTGAGAGCTTTTTAAAGTTA+GGG | - | chr4.3:29040741-29040760 | None:intergenic | 25.0% |
| ACCTTCTTAGAAAAAGATGT+TGG | + | chr4.3:29040674-29040693 | MS.gene031592:CDS | 30.0% | |
| AGACAAGGATAAAATAGATC+AGG | - | chr4.3:29042575-29042594 | None:intergenic | 30.0% | |
| AGAGAAATTGTATATACCTG+GGG | - | chr4.3:29041856-29041875 | None:intergenic | 30.0% | |
| CAAACAATATATCACTCAAC+AGG | - | chr4.3:29041394-29041413 | None:intergenic | 30.0% | |
| CCTTCTTAGAAAAAGATGTT+GGG | + | chr4.3:29040675-29040694 | MS.gene031592:CDS | 30.0% | |
| CTTCTTAGAAAAAGATGTTG+GGG | + | chr4.3:29040676-29040695 | MS.gene031592:CDS | 30.0% | |
| GAGCTTAGATAGCAATATTA+AGG | + | chr4.3:29042000-29042019 | MS.gene031592:intron | 30.0% | |
| GATAAAATAGATCAGGTTCT+TGG | - | chr4.3:29042568-29042587 | None:intergenic | 30.0% | |
| GATCTGTCAATAAACACAAT+AGG | - | chr4.3:29040265-29040284 | None:intergenic | 30.0% | |
| GGTAGTTGAAATAATAAACC+CGG | + | chr4.3:29039601-29039620 | MS.gene031592:CDS | 30.0% | |
| GTAGAGAAATTGTATATACC+TGG | - | chr4.3:29041858-29041877 | None:intergenic | 30.0% | |
| TAAAAGGTTTGTATACGATC+TGG | - | chr4.3:29039021-29039040 | None:intergenic | 30.0% | |
| TAAAAGTTTGCCAAAACATC+AGG | - | chr4.3:29039449-29039468 | None:intergenic | 30.0% | |
| TAAAGCATACACTATCCAAT+TGG | - | chr4.3:29041250-29041269 | None:intergenic | 30.0% | |
| TCCTTTAGACATAAATGATG+CGG | + | chr4.3:29042663-29042682 | MS.gene031592:intron | 30.0% | |
| TTTACTCCCTGTAAAAAACT+TGG | + | chr4.3:29040961-29040980 | MS.gene031592:CDS | 30.0% | |
| TTTATGTCTAAAGGAACAAC+AGG | - | chr4.3:29042658-29042677 | None:intergenic | 30.0% | |
| TTTGAAAGCTAAGAAAAGAG+AGG | + | chr4.3:29039238-29039257 | MS.gene031592:CDS | 30.0% | |
| TTTGCTTGGACTCTTATTAA+TGG | - | chr4.3:29040848-29040867 | None:intergenic | 30.0% | |
| ! | AAATTTGAAGATTCTGGCTA+TGG | + | chr4.3:29040078-29040097 | MS.gene031592:CDS | 30.0% |
| ! | ATCTAGGATTGGAATATTAC+GGG | + | chr4.3:29039891-29039910 | MS.gene031592:CDS | 30.0% |
| ! | ATGAATCATCATTTTCCCAA+AGG | - | chr4.3:29042839-29042858 | None:intergenic | 30.0% |
| ! | CAATGTTATCTAAAGCTAGT+AGG | + | chr4.3:29042416-29042435 | MS.gene031592:intron | 30.0% |
| ! | CTCTTATTAATGGAGTTTTG+TGG | - | chr4.3:29040838-29040857 | None:intergenic | 30.0% |
| ! | GACGATATGGACATTTTTAA+AGG | + | chr4.3:29040052-29040071 | MS.gene031592:CDS | 30.0% |
| ! | GATCTATTTTATCCTTGTCT+TGG | + | chr4.3:29042575-29042594 | MS.gene031592:intron | 30.0% |
| ! | GGTAACTTGTAATGAAAAAG+TGG | - | chr4.3:29039500-29039519 | None:intergenic | 30.0% |
| ! | TGAATCATCATTTTCCCAAA+GGG | - | chr4.3:29042838-29042857 | None:intergenic | 30.0% |
| ! | TGGCTTTTATCAGTTGAAAA+CGG | - | chr4.3:29039521-29039540 | None:intergenic | 30.0% |
| ! | TTGTTTTCATTGTTAGTGGA+CGG | + | chr4.3:29040914-29040933 | MS.gene031592:CDS | 30.0% |
| !! | CGAAGTCATTTTATAGGAAA+TGG | - | chr4.3:29042332-29042351 | None:intergenic | 30.0% |
| !! | CGTTTTAACAGGGTTAAAAT+GGG | + | chr4.3:29039686-29039705 | MS.gene031592:CDS | 30.0% |
| !! | GGTTTTCGAAGTCATTTTAT+AGG | - | chr4.3:29042338-29042357 | None:intergenic | 30.0% |
| !! | GTTTTGGCAAACTTTTATGA+TGG | + | chr4.3:29039452-29039471 | MS.gene031592:CDS | 30.0% |
| !! | TCTCTTTTCTTAGCTTTCAA+AGG | - | chr4.3:29039239-29039258 | None:intergenic | 30.0% |
| !! | TTCTTTGCTATTACAGCTTA+AGG | + | chr4.3:29039295-29039314 | MS.gene031592:CDS | 30.0% |
| !!! | AGATCATCTAGAAAGTGTTT+TGG | + | chr4.3:29041780-29041799 | MS.gene031592:CDS | 30.0% |
| !!! | AGCAATTCCAAGTTTTTTAC+AGG | - | chr4.3:29040971-29040990 | None:intergenic | 30.0% |
| !!! | GCAATTCCAAGTTTTTTACA+GGG | - | chr4.3:29040970-29040989 | None:intergenic | 30.0% |
| !!! | TAGGCAACTTTTTCAGTAAT+TGG | - | chr4.3:29040292-29040311 | None:intergenic | 30.0% |
| AAACAAGCTGTTCTTTCAGA+AGG | + | chr4.3:29039580-29039599 | MS.gene031592:CDS | 35.0% | |
| AAACGCCTTCTTAGAAAAGT+TGG | - | chr4.3:29039671-29039690 | None:intergenic | 35.0% | |
| AAAGCTCTCAATTGATGCTA+TGG | + | chr4.3:29040750-29040769 | MS.gene031592:CDS | 35.0% | |
| AAATAGAAGAAAGTTGCAGC+AGG | + | chr4.3:29040206-29040225 | MS.gene031592:CDS | 35.0% | |
| AACACAATAGGTTCATAACC+AGG | - | chr4.3:29040253-29040272 | None:intergenic | 35.0% | |
| AAGAAAAGAGAGGACAACAA+AGG | + | chr4.3:29039248-29039267 | MS.gene031592:CDS | 35.0% | |
| AAGCCTGTGATAACAGAAAA+TGG | + | chr4.3:29042154-29042173 | MS.gene031592:intron | 35.0% | |
| AATAACTTCCTTTCATCCCT+AGG | + | chr4.3:29041181-29041200 | MS.gene031592:intron | 35.0% | |
| AATGACTGAAAGTGACAAAC+AGG | + | chr4.3:29042921-29042940 | MS.gene031592:CDS | 35.0% | |
| AATGTCAGATATCCAAGACA+AGG | - | chr4.3:29042590-29042609 | None:intergenic | 35.0% | |
| ACCATCATAGTCCAACAAAA+TGG | - | chr4.3:29040806-29040825 | None:intergenic | 35.0% | |
| ACCCAAATATAATCATCCTC+CGG | - | chr4.3:29039623-29039642 | None:intergenic | 35.0% | |
| ACCGCATCATTTATGTCTAA+AGG | - | chr4.3:29042667-29042686 | None:intergenic | 35.0% | |
| ACTTTCCTTTCGTTCAATAC+TGG | - | chr4.3:29041695-29041714 | None:intergenic | 35.0% | |
| AGAAAAAGATGTTGGGGAAT+AGG | + | chr4.3:29040682-29040701 | MS.gene031592:CDS | 35.0% | |
| AGAAAAGAGAGGACAACAAA+GGG | + | chr4.3:29039249-29039268 | MS.gene031592:CDS | 35.0% | |
| AGCCTGTGATAACAGAAAAT+GGG | + | chr4.3:29042155-29042174 | MS.gene031592:intron | 35.0% | |
| AGTATTAAGATCATGCCTGT+TGG | + | chr4.3:29039923-29039942 | MS.gene031592:CDS | 35.0% | |
| AGTTGAAATAATAAACCCGG+AGG | + | chr4.3:29039604-29039623 | MS.gene031592:CDS | 35.0% | |
| ATATAGGACTCTTCCTGTTA+GGG | + | chr4.3:29039745-29039764 | MS.gene031592:CDS | 35.0% | |
| ATCGTCAATACCAAGCAAAA+TGG | - | chr4.3:29040038-29040057 | None:intergenic | 35.0% | |
| ATTACAAGCATGCTCTTCTT+TGG | - | chr4.3:29040439-29040458 | None:intergenic | 35.0% | |
| CGATCAGAAGAAATAGTTGA+CGG | - | chr4.3:29039191-29039210 | None:intergenic | 35.0% | |
| CTGCATTCAGACAAGAAAAA+TGG | - | chr4.3:29041153-29041172 | None:intergenic | 35.0% | |
| GAAAATGTTCCATCTAACCA+TGG | + | chr4.3:29042541-29042560 | MS.gene031592:intron | 35.0% | |
| GGTTCATGATTACCATTTGA+TGG | + | chr4.3:29039640-29039659 | MS.gene031592:CDS | 35.0% | |
| GTAAAAACAAACTGCTATGC+TGG | - | chr4.3:29042754-29042773 | None:intergenic | 35.0% | |
| GTATTAAGATCATGCCTGTT+GGG | + | chr4.3:29039924-29039943 | MS.gene031592:CDS | 35.0% | |
| TAATAAGAGTCCAAGCAAAG+AGG | + | chr4.3:29040849-29040868 | MS.gene031592:CDS | 35.0% | |
| TACAGCACAAGTTCATAGTA+TGG | - | chr4.3:29041117-29041136 | None:intergenic | 35.0% | |
| TATATAGGACTCTTCCTGTT+AGG | + | chr4.3:29039744-29039763 | MS.gene031592:CDS | 35.0% | |
| TATGGTTTCAGCTTACAAGA+GGG | + | chr4.3:29040768-29040787 | MS.gene031592:CDS | 35.0% | |
| TCTTATACCATTTGCATTGC+AGG | + | chr4.3:29042858-29042877 | MS.gene031592:intron | 35.0% | |
| TGAATCTGTTATGAGGATGT+CGG | + | chr4.3:29039964-29039983 | MS.gene031592:CDS | 35.0% | |
| TGAGAACATCAGTTGTCTTA+TGG | + | chr4.3:29041347-29041366 | MS.gene031592:intron | 35.0% | |
| TGATACATCATCTTGTTCAG+CGG | - | chr4.3:29039381-29039400 | None:intergenic | 35.0% | |
| TGATGTATCACAGTATTTGC+TGG | + | chr4.3:29039391-29039410 | MS.gene031592:CDS | 35.0% | |
| TGTTATTGTCACAGCTGTAA+GGG | + | chr4.3:29040330-29040349 | MS.gene031592:CDS | 35.0% | |
| TTACAAGCATGCTCTTCTTT+GGG | - | chr4.3:29040438-29040457 | None:intergenic | 35.0% | |
| TTCCATCATCGGAGATATAT+AGG | + | chr4.3:29039729-29039748 | MS.gene031592:CDS | 35.0% | |
| TTTATGATGGCTTCTGCAAA+AGG | + | chr4.3:29039465-29039484 | MS.gene031592:CDS | 35.0% | |
| ! | AACTTGCTTTCACCATGTTT+CGG | - | chr4.3:29042360-29042379 | None:intergenic | 35.0% |
| ! | AGCAATATTAAGGGCATGAT+TGG | + | chr4.3:29042010-29042029 | MS.gene031592:intron | 35.0% |
| ! | CAAAGAGGTCATATCTCTTT+TGG | + | chr4.3:29040864-29040883 | MS.gene031592:CDS | 35.0% |
| ! | GAAGGAAAAACCATTTTGCT+TGG | + | chr4.3:29040025-29040044 | MS.gene031592:CDS | 35.0% |
| ! | GAATCATCATTTTCCCAAAG+GGG | - | chr4.3:29042837-29042856 | None:intergenic | 35.0% |
| ! | GTAATTGCTCTGATTTTGGA+TGG | + | chr4.3:29041617-29041636 | MS.gene031592:CDS | 35.0% |
| ! | TCTAGAGTATCAGTCAAAGA+GGG | + | chr4.3:29039865-29039884 | MS.gene031592:CDS | 35.0% |
| ! | TGTGGTAATTGCTCTGATTT+TGG | + | chr4.3:29041613-29041632 | MS.gene031592:CDS | 35.0% |
| ! | TTCCCATTTTCTGTTATCAC+AGG | - | chr4.3:29042160-29042179 | None:intergenic | 35.0% |
| ! | TTGCTATTACAGCTTAAGGA+TGG | + | chr4.3:29039299-29039318 | MS.gene031592:CDS | 35.0% |
| !! | AACCTTTTAGATTTGGCTTC+TGG | + | chr4.3:29039032-29039051 | MS.gene031592:CDS | 35.0% |
| !! | ACCTTTTAGATTTGGCTTCT+GGG | + | chr4.3:29039033-29039052 | MS.gene031592:CDS | 35.0% |
| !! | ATATATCTCCGATGATGGAA+AGG | - | chr4.3:29039729-29039748 | None:intergenic | 35.0% |
| !! | CCCAACATCTTTTTCTAAGA+AGG | - | chr4.3:29040678-29040697 | None:intergenic | 35.0% |
| !! | CTAAAATGCATTCTGGAGTT+TGG | + | chr4.3:29041950-29041969 | MS.gene031592:intron | 35.0% |
| !! | CTCCAGAATGCATTTTAGAA+AGG | - | chr4.3:29041948-29041967 | None:intergenic | 35.0% |
| !! | GCGTTTTAACAGGGTTAAAA+TGG | + | chr4.3:29039685-29039704 | MS.gene031592:CDS | 35.0% |
| !! | GTCCTTTCTAAAATGCATTC+TGG | + | chr4.3:29041943-29041962 | MS.gene031592:intron | 35.0% |
| !! | TAGCTTTGGATTTAGAGTTG+TGG | + | chr4.3:29040708-29040727 | MS.gene031592:CDS | 35.0% |
| !! | TATATCTCCGATGATGGAAA+GGG | - | chr4.3:29039728-29039747 | None:intergenic | 35.0% |
| !! | TGTTTTCATTGTTAGTGGAC+GGG | + | chr4.3:29040915-29040934 | MS.gene031592:CDS | 35.0% |
| !! | TTTGCTTGGTATTGACGATA+TGG | + | chr4.3:29040039-29040058 | MS.gene031592:CDS | 35.0% |
| !!! | CAATTTGAGCATTTTTCAGG+TGG | + | chr4.3:29041566-29041585 | MS.gene031592:intron | 35.0% |
| !!! | TCTAAGAAGGCGTTTTAACA+GGG | + | chr4.3:29039676-29039695 | MS.gene031592:CDS | 35.0% |
| !!! | TTCTAAGAAGGCGTTTTAAC+AGG | + | chr4.3:29039675-29039694 | MS.gene031592:CDS | 35.0% |
| AAGTTTGCCAAAACATCAGG+AGG | - | chr4.3:29039446-29039465 | None:intergenic | 40.0% | |
| AATAGCTCTTGTTCAGACCT+AGG | - | chr4.3:29041201-29041220 | None:intergenic | 40.0% | |
| ACAACTGATGTTCTCAACTC+TGG | - | chr4.3:29041343-29041362 | None:intergenic | 40.0% | |
| ACCATGCATAGAAGAATCTG+GGG | + | chr4.3:29043155-29043174 | MS.gene031592:CDS | 40.0% | |
| ACCCGGAGGATGATTATATT+TGG | + | chr4.3:29039618-29039637 | MS.gene031592:CDS | 40.0% | |
| ACGTAGTTTCTTGCAAGACA+TGG | + | chr4.3:29040636-29040655 | MS.gene031592:CDS | 40.0% | |
| ACTTGCTTTCACCATGTTTC+GGG | - | chr4.3:29042359-29042378 | None:intergenic | 40.0% | |
| AGAAATCCAAAAGGTCCCTA+GGG | + | chr4.3:29042194-29042213 | MS.gene031592:intron | 40.0% | |
| AGAAGATCCAAAACCAAGGT+CGG | - | chr4.3:29041743-29041762 | None:intergenic | 40.0% | |
| AGAGATATGACCTCTTTGCT+TGG | - | chr4.3:29040862-29040881 | None:intergenic | 40.0% | |
| ATAGCTCTTGTTCAGACCTA+GGG | - | chr4.3:29041200-29041219 | None:intergenic | 40.0% | |
| ATGGAATGTTGAAGCAACTG+CGG | + | chr4.3:29040513-29040532 | MS.gene031592:CDS | 40.0% | |
| ATGTCTAAAGGAACAACAGG+AGG | - | chr4.3:29042655-29042674 | None:intergenic | 40.0% | |
| CAACAAATTCCCGACAACTA+AGG | - | chr4.3:29042443-29042462 | None:intergenic | 40.0% | |
| CACCATGCATAGAAGAATCT+GGG | + | chr4.3:29043154-29043173 | MS.gene031592:CDS | 40.0% | |
| CAGAACATGGATACTTCTTG+AGG | + | chr4.3:29040992-29041011 | MS.gene031592:CDS | 40.0% | |
| CCCAAATATAATCATCCTCC+GGG | - | chr4.3:29039622-29039641 | None:intergenic | 40.0% | |
| CCCGGAGGATGATTATATTT+GGG | + | chr4.3:29039619-29039638 | MS.gene031592:CDS | 40.0% | |
| CTATATACAGAGGCAACTGA+TGG | + | chr4.3:29041667-29041686 | MS.gene031592:CDS | 40.0% | |
| CTATGGTTTCAGCTTACAAG+AGG | + | chr4.3:29040767-29040786 | MS.gene031592:CDS | 40.0% | |
| CTCTCCATCACTCATTGAAA+TGG | - | chr4.3:29040554-29040573 | None:intergenic | 40.0% | |
| CTGAACAAGAGCTATTACGT+GGG | + | chr4.3:29041205-29041224 | MS.gene031592:intron | 40.0% | |
| GAAACATGGTGAAAGCAAGT+TGG | + | chr4.3:29042359-29042378 | MS.gene031592:intron | 40.0% | |
| GAAGCCATTTCAATGAGTGA+TGG | + | chr4.3:29040547-29040566 | MS.gene031592:CDS | 40.0% | |
| GACGAGCATAATCGAAAGTA+TGG | - | chr4.3:29039814-29039833 | None:intergenic | 40.0% | |
| GAGCTCAAACAGCAATTTGA+AGG | + | chr4.3:29040007-29040026 | MS.gene031592:CDS | 40.0% | |
| GATAAACTGACCACTCTTTG+CGG | - | chr4.3:29041821-29041840 | None:intergenic | 40.0% | |
| GATACATCATCTTGTTCAGC+GGG | - | chr4.3:29039380-29039399 | None:intergenic | 40.0% | |
| GATATGGAGGTTCTGTATGT+TGG | + | chr4.3:29039332-29039351 | MS.gene031592:CDS | 40.0% | |
| GATCAATGCAGATCCATACA+TGG | - | chr4.3:29041442-29041461 | None:intergenic | 40.0% | |
| GCTTCTGCAAAAGGCAATTA+TGG | + | chr4.3:29039474-29039493 | MS.gene031592:CDS | 40.0% | |
| GTAGGGATAGCTTAAGTGAA+TGG | + | chr4.3:29040938-29040957 | MS.gene031592:CDS | 40.0% | |
| GTCCTATATATCTCCGATGA+TGG | - | chr4.3:29039734-29039753 | None:intergenic | 40.0% | |
| GTCGGATTGAATCTGTTATG+AGG | + | chr4.3:29039957-29039976 | MS.gene031592:CDS | 40.0% | |
| GTTTGTAGACAGGGAATATC+TGG | + | chr4.3:29040385-29040404 | MS.gene031592:CDS | 40.0% | |
| TACAGAACCTCCATATCTTC+TGG | - | chr4.3:29039329-29039348 | None:intergenic | 40.0% | |
| TAGGATTGGAATATTACGGG+AGG | + | chr4.3:29039894-29039913 | MS.gene031592:CDS | 40.0% | |
| TATTGTGCTACAACCCCTTT+GGG | + | chr4.3:29042821-29042840 | MS.gene031592:intron | 40.0% | |
| TCACCATGCATAGAAGAATC+TGG | + | chr4.3:29043153-29043172 | MS.gene031592:CDS | 40.0% | |
| TCAGGCAGTAAGTGTTTCTT+CGG | + | chr4.3:29039160-29039179 | MS.gene031592:CDS | 40.0% | |
| TCCCAGAAGCCAAATCTAAA+AGG | - | chr4.3:29039037-29039056 | None:intergenic | 40.0% | |
| TCTGAACAAGAGCTATTACG+TGG | + | chr4.3:29041204-29041223 | MS.gene031592:intron | 40.0% | |
| TGAACAAGAGCTATTACGTG+GGG | + | chr4.3:29041206-29041225 | MS.gene031592:intron | 40.0% | |
| TGACAATAACACACTCAGCA+AGG | - | chr4.3:29040321-29040340 | None:intergenic | 40.0% | |
| TGCTTCTGTATTTGCTTGCA+CGG | + | chr4.3:29043038-29043057 | MS.gene031592:CDS | 40.0% | |
| TGGATTTCCAGAAGATATGG+AGG | + | chr4.3:29039319-29039338 | MS.gene031592:CDS | 40.0% | |
| TTAACCCTGCTAGAGGTAAA+GGG | + | chr4.3:29040158-29040177 | MS.gene031592:CDS | 40.0% | |
| TTACAAGAGGGCAAAGAGTA+GGG | + | chr4.3:29040780-29040799 | MS.gene031592:CDS | 40.0% | |
| TTATTGTGCTACAACCCCTT+TGG | + | chr4.3:29042820-29042839 | MS.gene031592:intron | 40.0% | |
| TTCGCATTGGAACTTGATTC+AGG | - | chr4.3:29040412-29040431 | None:intergenic | 40.0% | |
| TTGATCACTTCCTCCATGTA+TGG | + | chr4.3:29041426-29041445 | MS.gene031592:intron | 40.0% | |
| TTTAGTATCTCCTCCCTAAC+AGG | - | chr4.3:29039761-29039780 | None:intergenic | 40.0% | |
| TTTCTTGCAAGACATGGAGA+GGG | + | chr4.3:29040642-29040661 | MS.gene031592:CDS | 40.0% | |
| ! | AAAGAGGGGTTATCTAGGAT+TGG | + | chr4.3:29039880-29039899 | MS.gene031592:CDS | 40.0% |
| ! | CAACATTCCATGGATTGACA+CGG | - | chr4.3:29040504-29040523 | None:intergenic | 40.0% |
| ! | CTAGAGTATCAGTCAAAGAG+GGG | + | chr4.3:29039866-29039885 | MS.gene031592:CDS | 40.0% |
| ! | GCAAGCAAATACAGAAGCAT+TGG | - | chr4.3:29043037-29043056 | None:intergenic | 40.0% |
| ! | GGATGGATTTCCAGAAGATA+TGG | + | chr4.3:29039316-29039335 | MS.gene031592:CDS | 40.0% |
| ! | GTCTAGAGTATCAGTCAAAG+AGG | + | chr4.3:29039864-29039883 | MS.gene031592:CDS | 40.0% |
| ! | GTGTTATTGTCACAGCTGTA+AGG | + | chr4.3:29040329-29040348 | MS.gene031592:CDS | 40.0% |
| ! | TGGTTCCAGTATTGAACGAA+AGG | + | chr4.3:29041687-29041706 | MS.gene031592:CDS | 40.0% |
| ! | TTTTCTGCCTCCTGATGTTT+TGG | + | chr4.3:29039436-29039455 | MS.gene031592:CDS | 40.0% |
| ! | TTTTGGATCTTCTCAGGCTA+AGG | + | chr4.3:29041750-29041769 | MS.gene031592:CDS | 40.0% |
| !! | AAAGAGTAGGGCCATTTTGT+TGG | + | chr4.3:29040792-29040811 | MS.gene031592:CDS | 40.0% |
| !! | ACAAAGGGTGGAGTTTTAGT+TGG | + | chr4.3:29039264-29039283 | MS.gene031592:CDS | 40.0% |
| !! | AGCAAATACAGAAGCATTGG+AGG | - | chr4.3:29043034-29043053 | None:intergenic | 40.0% |
| !! | ATATCTCCGATGATGGAAAG+GGG | - | chr4.3:29039727-29039746 | None:intergenic | 40.0% |
| !! | GAAAGGAAAGTGCTTTGGTT+TGG | + | chr4.3:29041704-29041723 | MS.gene031592:CDS | 40.0% |
| !! | GCCATTTTGTTGGACTATGA+TGG | + | chr4.3:29040802-29040821 | MS.gene031592:CDS | 40.0% |
| !! | GTTTTCATTGTTAGTGGACG+GGG | + | chr4.3:29040916-29040935 | MS.gene031592:CDS | 40.0% |
| !! | TGAACGAAAGGAAAGTGCTT+TGG | + | chr4.3:29041699-29041718 | MS.gene031592:CDS | 40.0% |
| !! | TGCGGCATGAAAAGCATTAT+CGG | + | chr4.3:29040581-29040600 | MS.gene031592:CDS | 40.0% |
| !! | TGCTGCCAACTTTTCTAAGA+AGG | + | chr4.3:29039663-29039682 | MS.gene031592:CDS | 40.0% |
| !! | TGCTTTGGTTTGGCAATACA+GGG | + | chr4.3:29041714-29041733 | MS.gene031592:CDS | 40.0% |
| !!! | GTGGAGTTTTAGTTGGAATG+AGG | + | chr4.3:29039271-29039290 | MS.gene031592:CDS | 40.0% |
| AAACAACACCCCAAATGGCA+AGG | + | chr4.3:29040112-29040131 | MS.gene031592:CDS | 45.0% | |
| AAAGAGAGGACAACAAAGGG+TGG | + | chr4.3:29039252-29039271 | MS.gene031592:CDS | 45.0% | |
| AACAGCTCTTCCTTGCCATT+TGG | - | chr4.3:29040125-29040144 | None:intergenic | 45.0% | |
| AACATCAGGAGGCAGAAAAG+TGG | - | chr4.3:29039435-29039454 | None:intergenic | 45.0% | |
| AAGTTGGCAGCACCATCAAA+TGG | - | chr4.3:29039655-29039674 | None:intergenic | 45.0% | |
| AAGTTTCCCATTCACCGTCT+TGG | - | chr4.3:29041594-29041613 | None:intergenic | 45.0% | |
| AATTTCCCAGCAATGGGATC+GGG | + | chr4.3:29039056-29039075 | MS.gene031592:CDS | 45.0% | |
| ACACTCAGCAAGGCTGTAAT+AGG | - | chr4.3:29040311-29040330 | None:intergenic | 45.0% | |
| ACATCAGGAGGCAGAAAAGT+GGG | - | chr4.3:29039434-29039453 | None:intergenic | 45.0% | |
| AGTTTCCCATTCACCGTCTT+GGG | - | chr4.3:29041593-29041612 | None:intergenic | 45.0% | |
| ATCTGTCATCACCAACACAC+AGG | - | chr4.3:29042957-29042976 | None:intergenic | 45.0% | |
| ATGCCTGTTGGGATTCACAT+GGG | + | chr4.3:29039935-29039954 | MS.gene031592:CDS | 45.0% | |
| ATTGTCACAGCTGTAAGGGA+TGG | + | chr4.3:29040334-29040353 | MS.gene031592:CDS | 45.0% | |
| CAATGCAGATCCATACATGG+AGG | - | chr4.3:29041439-29041458 | None:intergenic | 45.0% | |
| CAGAAATCCAAAAGGTCCCT+AGG | + | chr4.3:29042193-29042212 | MS.gene031592:intron | 45.0% | |
| CAGATAGTTAACCCTGCTAG+AGG | + | chr4.3:29040151-29040170 | MS.gene031592:CDS | 45.0% | |
| CAGTCAAAGAGGGGTTATCT+AGG | + | chr4.3:29039875-29039894 | MS.gene031592:CDS | 45.0% | |
| CCTGAGAAGATCCAAAACCA+AGG | - | chr4.3:29041747-29041766 | None:intergenic | 45.0% | |
| CTAGTAGGTCCTTAGTTGTC+GGG | + | chr4.3:29042431-29042450 | MS.gene031592:intron | 45.0% | |
| CTCACATCCTGCAATGCAAA+TGG | - | chr4.3:29042868-29042887 | None:intergenic | 45.0% | |
| CTCTAGCAGGGTTAACTATC+TGG | - | chr4.3:29040153-29040172 | None:intergenic | 45.0% | |
| CTGAAACCAATCAGACCCTA+GGG | - | chr4.3:29042212-29042231 | None:intergenic | 45.0% | |
| CTTACAAGAGGGCAAAGAGT+AGG | + | chr4.3:29040779-29040798 | MS.gene031592:CDS | 45.0% | |
| CTTCTTTGGGCTATTCGCAT+TGG | - | chr4.3:29040425-29040444 | None:intergenic | 45.0% | |
| CTTGGAATTGCTGCAGAACA+TGG | + | chr4.3:29040979-29040998 | MS.gene031592:CDS | 45.0% | |
| GAACATAGGCTTCCCACAAA+TGG | - | chr4.3:29039556-29039575 | None:intergenic | 45.0% | |
| GAATTTCCCAGCAATGGGAT+CGG | + | chr4.3:29039055-29039074 | MS.gene031592:CDS | 45.0% | |
| GACTTCGAAAACCCGAAACA+TGG | + | chr4.3:29042345-29042364 | MS.gene031592:intron | 45.0% | |
| GCAGTTGCTTCAACATTCCA+TGG | - | chr4.3:29040514-29040533 | None:intergenic | 45.0% | |
| GCTAGTAGGTCCTTAGTTGT+CGG | + | chr4.3:29042430-29042449 | MS.gene031592:intron | 45.0% | |
| GGAGGGAGTTTAAAGAACGA+AGG | + | chr4.3:29039084-29039103 | MS.gene031592:CDS | 45.0% | |
| GGGAGTTTAAAGAACGAAGG+CGG | + | chr4.3:29039087-29039106 | MS.gene031592:CDS | 45.0% | |
| GTATCCCTTTACCTCTAGCA+GGG | - | chr4.3:29040165-29040184 | None:intergenic | 45.0% | |
| GTTAACCCTGCTAGAGGTAA+AGG | + | chr4.3:29040157-29040176 | MS.gene031592:CDS | 45.0% | |
| GTTCTTGGTCCATGGTTAGA+TGG | - | chr4.3:29042553-29042572 | None:intergenic | 45.0% | |
| GTTTCTTGCAAGACATGGAG+AGG | + | chr4.3:29040641-29040660 | MS.gene031592:CDS | 45.0% | |
| TAGATCAGGTTCTTGGTCCA+TGG | - | chr4.3:29042561-29042580 | None:intergenic | 45.0% | |
| TCCCCAGATTCTTCTATGCA+TGG | - | chr4.3:29043159-29043178 | None:intergenic | 45.0% | |
| TCTGGGAATTTCCCAGCAAT+GGG | + | chr4.3:29039050-29039069 | MS.gene031592:CDS | 45.0% | |
| TCTGTATTTGCTTGCACGGT+TGG | + | chr4.3:29043042-29043061 | MS.gene031592:CDS | 45.0% | |
| TGCTGAAACAACACCCCAAA+TGG | + | chr4.3:29040107-29040126 | MS.gene031592:CDS | 45.0% | |
| TGGGGAATAGGTCTTAGCTT+TGG | + | chr4.3:29040694-29040713 | MS.gene031592:CDS | 45.0% | |
| TGTATCCCTTTACCTCTAGC+AGG | - | chr4.3:29040166-29040185 | None:intergenic | 45.0% | |
| TGTGAGCAAAGGCTTAGTTG+CGG | + | chr4.3:29042882-29042901 | MS.gene031592:CDS | 45.0% | |
| TGTTATGAGGATGTCGGATG+AGG | + | chr4.3:29039970-29039989 | MS.gene031592:CDS | 45.0% | |
| TGTTCAGACCTAGGGATGAA+AGG | - | chr4.3:29041192-29041211 | None:intergenic | 45.0% | |
| TTGTCACAGCTGTAAGGGAT+GGG | + | chr4.3:29040335-29040354 | MS.gene031592:CDS | 45.0% | |
| TTTGTGGGAAGCCTATGTTC+TGG | + | chr4.3:29039556-29039575 | MS.gene031592:CDS | 45.0% | |
| ! | ACAGCTCTTCCTTGCCATTT+GGG | - | chr4.3:29040124-29040143 | None:intergenic | 45.0% |
| ! | AGCAGGATCAACAGAGTGTT+TGG | + | chr4.3:29040223-29040242 | MS.gene031592:CDS | 45.0% |
| ! | CAGCTTGTTTGCCAGAACAT+AGG | - | chr4.3:29039570-29039589 | None:intergenic | 45.0% |
| ! | TCTGAAACCAATCAGACCCT+AGG | - | chr4.3:29042213-29042232 | None:intergenic | 45.0% |
| ! | TGGTGATGACAGATCAGATG+AGG | + | chr4.3:29042963-29042982 | MS.gene031592:CDS | 45.0% |
| ! | TTCTGGGAATTTCCCAGCAA+TGG | + | chr4.3:29039049-29039068 | MS.gene031592:CDS | 45.0% |
| !! | GTGCTTTGGTTTGGCAATAC+AGG | + | chr4.3:29041713-29041732 | MS.gene031592:CDS | 45.0% |
| !!! | CCTTGGTTTTGGATCTTCTC+AGG | + | chr4.3:29041744-29041763 | MS.gene031592:CDS | 45.0% |
| !!! | TTTTTCAGGTGGTCCCAAGA+CGG | + | chr4.3:29041577-29041596 | MS.gene031592:intron | 45.0% |
| AAAGGTCCCTAGGGTCTGAT+TGG | + | chr4.3:29042203-29042222 | MS.gene031592:intron | 50.0% | |
| ACAAATGGCGATCAAAGCGG+TGG | - | chr4.3:29039541-29039560 | None:intergenic | 50.0% | |
| ACCGCTTTGATCGCCATTTG+TGG | + | chr4.3:29039540-29039559 | MS.gene031592:CDS | 50.0% | |
| ACTCAACAGGAACTTCTCCC+TGG | - | chr4.3:29041381-29041400 | None:intergenic | 50.0% | |
| ATTTCCCAGCAATGGGATCG+GGG | + | chr4.3:29039057-29039076 | MS.gene031592:CDS | 50.0% | |
| CATCAGGAGGCAGAAAAGTG+GGG | - | chr4.3:29039433-29039452 | None:intergenic | 50.0% | |
| CATGCCTGTTGGGATTCACA+TGG | + | chr4.3:29039934-29039953 | MS.gene031592:CDS | 50.0% | |
| CCCACAAATGGCGATCAAAG+CGG | - | chr4.3:29039544-29039563 | None:intergenic | 50.0% | |
| CCGCTTTGATCGCCATTTGT+GGG | + | chr4.3:29039541-29039560 | MS.gene031592:CDS | 50.0% | |
| CTCAGAGGTGGATGATGATC+AGG | + | chr4.3:29039142-29039161 | MS.gene031592:CDS | 50.0% | |
| CTGTTGGGATTCACATGGGT+CGG | + | chr4.3:29039939-29039958 | MS.gene031592:CDS | 50.0% | |
| GAATGTTGAAGCAACTGCGG+AGG | + | chr4.3:29040516-29040535 | MS.gene031592:CDS | 50.0% | |
| GACGGTGAATGGGAAACTTG+TGG | + | chr4.3:29041595-29041614 | MS.gene031592:CDS | 50.0% | |
| GCATAGCCCCTTTCCATCAT+CGG | + | chr4.3:29039718-29039737 | MS.gene031592:CDS | 50.0% | |
| GCATTGCAGGATGTGAGCAA+AGG | + | chr4.3:29042871-29042890 | MS.gene031592:intron | 50.0% | |
| GGTGTTCTCCATCGCTTAGT+GGG | + | chr4.3:29040473-29040492 | MS.gene031592:CDS | 50.0% | |
| GTATGTCAGCACTCATGACG+TGG | + | chr4.3:29040603-29040622 | MS.gene031592:CDS | 50.0% | |
| GTCTTATGGCAGTCATGCCA+GGG | + | chr4.3:29041361-29041380 | MS.gene031592:intron | 50.0% | |
| GTGTTCTCCATCGCTTAGTG+GGG | + | chr4.3:29040474-29040493 | MS.gene031592:CDS | 50.0% | |
| TAGGACTCTTCCTGTTAGGG+AGG | + | chr4.3:29039748-29039767 | MS.gene031592:CDS | 50.0% | |
| TATCGTTGAAGTGAAGCCCC+AGG | + | chr4.3:29041837-29041856 | MS.gene031592:CDS | 50.0% | |
| TCCTGCTGCAGTCGTATGTT+GGG | + | chr4.3:29039842-29039861 | MS.gene031592:CDS | 50.0% | |
| TGTCTTATGGCAGTCATGCC+AGG | + | chr4.3:29041360-29041379 | MS.gene031592:intron | 50.0% | |
| TTCCTGCTGCAGTCGTATGT+TGG | + | chr4.3:29039841-29039860 | MS.gene031592:CDS | 50.0% | |
| ! | AACAGAGTGTTTGGACGACC+TGG | + | chr4.3:29040232-29040251 | MS.gene031592:CDS | 50.0% |
| ! | ATCAGACCCTAGGGACCTTT+TGG | - | chr4.3:29042203-29042222 | None:intergenic | 50.0% |
| ! | CAGCTCTTCCTTGCCATTTG+GGG | - | chr4.3:29040123-29040142 | None:intergenic | 50.0% |
| ! | CATTGTTAGTGGACGGGGTA+GGG | + | chr4.3:29040921-29040940 | MS.gene031592:CDS | 50.0% |
| ! | GATGTCGGATGAGGAGTGTA+AGG | + | chr4.3:29039979-29039998 | MS.gene031592:CDS | 50.0% |
| ! | GCTGACTTTGTCCTGTGTGT+TGG | + | chr4.3:29042943-29042962 | MS.gene031592:CDS | 50.0% |
| ! | GGATGAGGAGTGTAAGGCAA+GGG | + | chr4.3:29039985-29040004 | MS.gene031592:CDS | 50.0% |
| ! | GTGATGGAGAGAAGCAGTTG+CGG | + | chr4.3:29040563-29040582 | MS.gene031592:CDS | 50.0% |
| ! | TCATTGTTAGTGGACGGGGT+AGG | + | chr4.3:29040920-29040939 | MS.gene031592:CDS | 50.0% |
| ACCCAACATACGACTGCAGC+AGG | - | chr4.3:29039846-29039865 | None:intergenic | 55.0% | |
| AGACATGGAGAGGGCTTGCA+CGG | + | chr4.3:29040651-29040670 | MS.gene031592:CDS | 55.0% | |
| CAATACAGGGATGCCGACCT+TGG | + | chr4.3:29041727-29041746 | MS.gene031592:CDS | 55.0% | |
| CGACCCATGTGAATCCCAAC+AGG | - | chr4.3:29039941-29039960 | None:intergenic | 55.0% | |
| CTTTGCGGCAACAGGCTCAT+TGG | - | chr4.3:29041806-29041825 | None:intergenic | 55.0% | |
| GCACTCATGACGTGGCTTAC+TGG | + | chr4.3:29040611-29040630 | MS.gene031592:CDS | 55.0% | |
| GGGCTATCCGTGTCAATCCA+TGG | + | chr4.3:29040494-29040513 | MS.gene031592:CDS | 55.0% | |
| GGGTGTTCTCCATCGCTTAG+TGG | + | chr4.3:29040472-29040491 | MS.gene031592:CDS | 55.0% | |
| GTGGTCCCAAGACGGTGAAT+GGG | + | chr4.3:29041585-29041604 | MS.gene031592:CDS | 55.0% | |
| TGACCACTCTTTGCGGCAAC+AGG | - | chr4.3:29041814-29041833 | None:intergenic | 55.0% | |
| ! | AGGGATGCCGACCTTGGTTT+TGG | + | chr4.3:29041733-29041752 | MS.gene031592:CDS | 55.0% |
| ! | CGGATGAGGAGTGTAAGGCA+AGG | + | chr4.3:29039984-29040003 | MS.gene031592:CDS | 55.0% |
| !! | TCCACCTCTGAGACAATCCC+CGG | - | chr4.3:29039134-29039153 | None:intergenic | 55.0% |
| AAGAACGAAGGCGGATGCCG+AGG | + | chr4.3:29039096-29039115 | MS.gene031592:CDS | 60.0% | |
| AGAACGAAGGCGGATGCCGA+GGG | + | chr4.3:29039097-29039116 | MS.gene031592:CDS | 60.0% | |
| CCCGGGACACTCATAACCCT+CGG | - | chr4.3:29039116-29039135 | None:intergenic | 60.0% | |
| CCGAGGGTTATGAGTGTCCC+GGG | + | chr4.3:29039113-29039132 | MS.gene031592:CDS | 60.0% | |
| CGAGGGTTATGAGTGTCCCG+GGG | + | chr4.3:29039114-29039133 | MS.gene031592:CDS | 60.0% | |
| CGGATAGCCCCACTAAGCGA+TGG | - | chr4.3:29040484-29040503 | None:intergenic | 60.0% | |
| GAGCCTGTTGCCGCAAAGAG+TGG | + | chr4.3:29041808-29041827 | MS.gene031592:CDS | 60.0% | |
| GCCGAGGGTTATGAGTGTCC+CGG | + | chr4.3:29039112-29039131 | MS.gene031592:CDS | 60.0% | |
| GGTGGTCCCAAGACGGTGAA+TGG | + | chr4.3:29041584-29041603 | MS.gene031592:intron | 60.0% | |
| TGTCCCGGGGATTGTCTCAG+AGG | + | chr4.3:29039127-29039146 | MS.gene031592:CDS | 60.0% | |
| !! | CCACCTCTGAGACAATCCCC+GGG | - | chr4.3:29039133-29039152 | None:intergenic | 60.0% |
| AATGGGATCGGGGTCGGGGA+GGG | + | chr4.3:29039067-29039086 | MS.gene031592:CDS | 65.0% | |
| CAGCAATGGGATCGGGGTCG+GGG | + | chr4.3:29039063-29039082 | MS.gene031592:CDS | 65.0% | |
| CCAGCAATGGGATCGGGGTC+GGG | + | chr4.3:29039062-29039081 | MS.gene031592:CDS | 65.0% | |
| CCCAGCAATGGGATCGGGGT+CGG | + | chr4.3:29039061-29039080 | MS.gene031592:CDS | 65.0% | |
| CCCGGGGATTGTCTCAGAGG+TGG | + | chr4.3:29039130-29039149 | MS.gene031592:CDS | 65.0% | |
| CCGACCCCGATCCCATTGCT+GGG | - | chr4.3:29039064-29039083 | None:intergenic | 65.0% | |
| CAATGGGATCGGGGTCGGGG+AGG | + | chr4.3:29039066-29039085 | MS.gene031592:CDS | 70.0% | |
| CCCGACCCCGATCCCATTGC+TGG | - | chr4.3:29039065-29039084 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 29039011 | 29043188 | 29039011 | ID=MS.gene031592 |
| chr4.3 | mRNA | 29039011 | 29043188 | 29039011 | ID=MS.gene031592.t1;Parent=MS.gene031592 |
| chr4.3 | exon | 29039011 | 29041013 | 29039011 | ID=MS.gene031592.t1.exon1;Parent=MS.gene031592.t1 |
| chr4.3 | CDS | 29039011 | 29041013 | 29039011 | ID=cds.MS.gene031592.t1;Parent=MS.gene031592.t1 |
| chr4.3 | exon | 29041585 | 29041858 | 29041585 | ID=MS.gene031592.t1.exon2;Parent=MS.gene031592.t1 |
| chr4.3 | CDS | 29041585 | 29041858 | 29041585 | ID=cds.MS.gene031592.t1;Parent=MS.gene031592.t1 |
| chr4.3 | exon | 29042880 | 29043188 | 29042880 | ID=MS.gene031592.t1.exon3;Parent=MS.gene031592.t1 |
| chr4.3 | CDS | 29042880 | 29043188 | 29042880 | ID=cds.MS.gene031592.t1;Parent=MS.gene031592.t1 |
| Gene Sequence |
| Protein sequence |
