AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045478

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045478.t1 MTR_4g080160 99.187 861 7 0 1 861 1 861 0.0 1776
MS.gene045478.t1 MTR_1g109620 65.299 853 285 3 1 851 1 844 0.0 1210
MS.gene045478.t1 MTR_1g032730 64.610 859 285 9 1 849 1 850 0.0 1164
MS.gene045478.t1 MTR_8g105740 63.944 857 292 7 1 849 1 848 0.0 1162
MS.gene045478.t1 MTR_8g063790 64.277 823 286 2 32 852 25 841 0.0 1137
MS.gene045478.t1 MTR_4g129270 58.756 788 313 6 67 848 57 838 0.0 978
MS.gene045478.t1 MTR_4g129270 59.227 699 277 5 67 759 57 753 0.0 881
MS.gene045478.t1 MTR_3g078210 54.860 751 336 2 90 838 3 752 0.0 853
MS.gene045478.t1 MTR_3g467030 48.744 597 278 3 68 664 1 569 0.0 570
MS.gene045478.t1 MTR_2g073260 33.865 753 438 19 67 799 124 836 8.75e-142 444
MS.gene045478.t1 MTR_0034s0170 33.822 751 438 19 67 797 85 796 1.44e-134 424
MS.gene045478.t1 MTR_8g087910 34.746 354 200 8 43 387 53 384 7.14e-68 231
MS.gene045478.t1 MTR_8g087930 30.332 422 247 12 395 799 11 402 2.45e-52 192
MS.gene045478.t1 MTR_3g076810 51.880 133 63 1 67 199 39 170 8.17e-42 150
MS.gene045478.t1 MTR_3g467040 49.558 113 57 0 488 600 110 222 2.75e-30 120
MS.gene045478.t1 MTR_3g467040 33.793 145 91 2 315 456 1 143 1.08e-20 92.4
MS.gene045478.t1 MTR_3g008500 28.521 284 158 12 588 844 114 379 2.05e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045478.t1 AT1G06410 78.026 851 176 3 1 851 1 840 0.0 1382
MS.gene045478.t1 AT1G06410 78.026 851 176 3 1 851 1 840 0.0 1382
MS.gene045478.t1 AT1G06410 78.026 851 176 3 1 851 1 840 0.0 1382
MS.gene045478.t1 AT4G17770 62.818 866 304 6 1 861 1 853 0.0 1171
MS.gene045478.t1 AT4G17770 62.818 866 304 6 1 861 1 853 0.0 1171
MS.gene045478.t1 AT1G68020 62.673 868 292 6 1 849 1 855 0.0 1145
MS.gene045478.t1 AT1G68020 62.673 868 292 6 1 849 1 855 0.0 1145
MS.gene045478.t1 AT1G70290 60.660 849 318 4 1 846 1 836 0.0 1098
MS.gene045478.t1 AT1G23870 59.696 856 330 3 1 851 1 846 0.0 1094
MS.gene045478.t1 AT1G60140 60.539 854 328 2 1 852 1 847 0.0 1086
MS.gene045478.t1 AT1G60140 60.539 854 328 2 1 852 1 847 0.0 1086
MS.gene045478.t1 AT1G60140 60.539 854 328 2 1 852 1 847 0.0 1086
MS.gene045478.t1 AT1G60140 60.539 854 328 2 1 852 1 847 0.0 1086
MS.gene045478.t1 AT1G60140 60.539 854 328 2 1 852 1 847 0.0 1086
MS.gene045478.t1 AT2G18700 58.561 806 322 6 55 851 36 838 0.0 1010
MS.gene045478.t1 AT1G70290 57.008 849 311 5 1 846 1 798 0.0 1008
MS.gene045478.t1 AT1G60140 61.367 761 285 2 1 759 1 754 0.0 983
MS.gene045478.t1 AT1G68020 62.990 689 223 6 1 670 1 676 0.0 919
MS.gene045478.t1 AT1G16980 33.499 806 475 23 67 851 13 778 8.12e-143 443
MS.gene045478.t1 AT1G78580 33.686 757 432 22 67 797 93 805 1.22e-136 430
MS.gene045478.t1 AT1G78580 33.686 757 432 22 67 797 93 805 1.22e-136 430
MS.gene045478.t1 AT1G78580 33.686 757 432 22 67 797 93 805 1.22e-136 430
MS.gene045478.t1 AT1G78580 33.686 757 432 22 67 797 93 805 1.22e-136 430
MS.gene045478.t1 AT4G27550 31.598 826 479 22 67 850 5 786 2.38e-135 422
MS.gene045478.t1 AT4G27550 32.005 828 482 23 67 850 5 795 3.45e-135 422
MS.gene045478.t1 AT1G16980 35.105 621 353 18 67 677 13 593 1.53e-118 375

Find 221 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCGGAGGATGATTATATT+TGG 0.168883 4.2:+29835085 MS.gene045478:CDS
TGTGGTAATTGCTCTGATTT+TGG 0.190443 4.2:+29837080 MS.gene045478:CDS
AGGTATAAATTTGAAGATTC+TGG 0.215594 4.2:+29835539 MS.gene045478:CDS
CAAAGAGGTCATATCTCTTT+TGG 0.226862 4.2:+29836331 MS.gene045478:CDS
TTTGCTTGGACTCTTATTAA+TGG 0.243265 4.2:-29836312 None:intergenic
CCCGACCCCGATCCCATTGC+TGG 0.248765 4.2:-29834529 None:intergenic
ATTACAAGCATGCTCTTCTT+TGG 0.251977 4.2:-29835903 None:intergenic
AATAAATATGCTAGAATCTT+TGG 0.258899 4.2:+29838580 MS.gene045478:CDS
TCTGTATATAGTTTCATTAC+AGG 0.258995 4.2:-29837122 None:intergenic
AGGGATGCCGACCTTGGTTT+TGG 0.277265 4.2:+29837200 MS.gene045478:CDS
TTTGCTTGGTATTGACGATA+TGG 0.281634 4.2:+29835506 MS.gene045478:CDS
TTCGCATTGGAACTTGATTC+AGG 0.291144 4.2:-29835876 None:intergenic
ACAGCTCTTCCTTGCCATTT+GGG 0.295677 4.2:-29835588 None:intergenic
TCCCAGAAGCCAAATCTAAA+AGG 0.296805 4.2:-29834501 None:intergenic
CCAGCAATGGGATCGGGGTC+GGG 0.301443 4.2:+29834529 MS.gene045478:CDS
CAGCAATGGGATCGGGGTCG+GGG 0.303867 4.2:+29834530 MS.gene045478:CDS
AGATAATACTTTGCTTTACT+TGG 0.315020 4.2:-29838539 None:intergenic
GACGAGCATAATCGAAAGTA+TGG 0.320887 4.2:-29835278 None:intergenic
CTCTAGCAGGGTTAACTATC+TGG 0.321636 4.2:-29835617 None:intergenic
TTCTTTGCTATTACAGCTTA+AGG 0.321784 4.2:+29834762 MS.gene045478:CDS
GCTTCTGCAAAAGGCAATTA+TGG 0.326836 4.2:+29834941 MS.gene045478:CDS
AACAGCTCTTCCTTGCCATT+TGG 0.326987 4.2:-29835589 None:intergenic
TTGTAATATCAGAATTTATT+GGG 0.327538 4.2:+29835919 MS.gene045478:CDS
TTTAGTATCTCCTCCCTAAC+AGG 0.334244 4.2:-29835225 None:intergenic
CAATATATTCATAAGGAGTT+AGG 0.335793 4.2:-29835830 None:intergenic
CTTGTAATATCAGAATTTAT+TGG 0.336765 4.2:+29835918 MS.gene045478:CDS
TTACTAAATTCTGATATCAT+TGG 0.338425 4.2:+29835252 MS.gene045478:CDS
TATCTAGGATTGGAATATTA+CGG 0.338808 4.2:+29835357 MS.gene045478:CDS
CCCGGAGGATGATTATATTT+GGG 0.339590 4.2:+29835086 MS.gene045478:CDS
TGACCACTCTTTGCGGCAAC+AGG 0.344178 4.2:-29837278 None:intergenic
TATATAGGACTCTTCCTGTT+AGG 0.344777 4.2:+29835211 MS.gene045478:CDS
GCACTCATGACGTGGCTTAC+TGG 0.351395 4.2:+29836078 MS.gene045478:CDS
ACACTCAGCAAGGCTGTAAT+AGG 0.352058 4.2:-29835775 None:intergenic
GTGCTTTGGTTTGGCAATAC+AGG 0.355182 4.2:+29837180 MS.gene045478:CDS
ACTTTCCTTTCGTTCAATAC+TGG 0.357028 4.2:-29837159 None:intergenic
TTACAAGCATGCTCTTCTTT+GGG 0.358274 4.2:-29835902 None:intergenic
GTTTGTAGACAGGGAATATC+TGG 0.365870 4.2:+29835852 MS.gene045478:CDS
AAGTAAAGCAAAGTATTATC+TGG 0.370428 4.2:+29838541 MS.gene045478:CDS
TCACCATGCATAGAAGAATC+TGG 0.371337 4.2:+29838620 MS.gene045478:CDS
CTCTCCATCACTCATTGAAA+TGG 0.371727 4.2:-29836018 None:intergenic
GGATGGATTTCCAGAAGATA+TGG 0.376566 4.2:+29834783 MS.gene045478:CDS
TCCTGCTGCAGTCGTATGTT+GGG 0.381549 4.2:+29835309 MS.gene045478:CDS
AGATCATCTAGAAAGTGTTT+TGG 0.381754 4.2:+29837247 MS.gene045478:CDS
GGTTCATGATTACCATTTGA+TGG 0.383452 4.2:+29835107 MS.gene045478:CDS
TACAGAACCTCCATATCTTC+TGG 0.384072 4.2:-29834793 None:intergenic
AATTTCCCAGCAATGGGATC+GGG 0.387783 4.2:+29834523 MS.gene045478:CDS
TTCCATCATCGGAGATATAT+AGG 0.388493 4.2:+29835196 MS.gene045478:CDS
ATCTAGGATTGGAATATTAC+GGG 0.399527 4.2:+29835358 MS.gene045478:CDS
AGTTTCCCATTCACCGTCTT+GGG 0.399757 4.2:-29837057 None:intergenic
ACCATCATAGTCCAACAAAA+TGG 0.400346 4.2:-29836270 None:intergenic
TGAATATATTGTTTGTAGAC+AGG 0.403035 4.2:+29835842 MS.gene045478:CDS
CTTTGCGGCAACAGGCTCAT+TGG 0.407919 4.2:-29837270 None:intergenic
CAATGGGATCGGGGTCGGGG+AGG 0.407950 4.2:+29834533 MS.gene045478:CDS
TTCCTGCTGCAGTCGTATGT+TGG 0.414477 4.2:+29835308 MS.gene045478:CDS
TGAACGAAAGGAAAGTGCTT+TGG 0.417964 4.2:+29837166 MS.gene045478:CDS
AGCAGGATCAACAGAGTGTT+TGG 0.419750 4.2:+29835690 MS.gene045478:CDS
CTTCTTTGGGCTATTCGCAT+TGG 0.422173 4.2:-29835889 None:intergenic
GAAAGGAAAGTGCTTTGGTT+TGG 0.425700 4.2:+29837171 MS.gene045478:CDS
ATCGTCAATACCAAGCAAAA+TGG 0.428223 4.2:-29835502 None:intergenic
TAAAAGTTTGCCAAAACATC+AGG 0.429012 4.2:-29834913 None:intergenic
TTTATGATGGCTTCTGCAAA+AGG 0.429950 4.2:+29834932 MS.gene045478:CDS
CTCAGAGGTGGATGATGATC+AGG 0.430895 4.2:+29834609 MS.gene045478:CDS
GGTGGTCCCAAGACGGTGAA+TGG 0.434178 4.2:+29837051 MS.gene045478:intron
AAAGCTCTCAATTGATGCTA+TGG 0.434592 4.2:+29836217 MS.gene045478:CDS
AAACGCCTTCTTAGAAAAGT+TGG 0.435169 4.2:-29835135 None:intergenic
TTCTGGGAATTTCCCAGCAA+TGG 0.440101 4.2:+29834516 MS.gene045478:CDS
TCTGTATTTGCTTGCACGGT+TGG 0.440122 4.2:+29838509 MS.gene045478:CDS
GGTGTTCTCCATCGCTTAGT+GGG 0.441085 4.2:+29835940 MS.gene045478:CDS
TGGGGAATAGGTCTTAGCTT+TGG 0.442950 4.2:+29836161 MS.gene045478:CDS
GTTAACCCTGCTAGAGGTAA+AGG 0.443791 4.2:+29835624 MS.gene045478:CDS
GGGTGTTCTCCATCGCTTAG+TGG 0.443816 4.2:+29835939 MS.gene045478:CDS
GATCTGTCAATAAACACAAT+AGG 0.448371 4.2:-29835729 None:intergenic
TGATGTATCACAGTATTTGC+TGG 0.449009 4.2:+29834858 MS.gene045478:CDS
TGTATCCCTTTACCTCTAGC+AGG 0.449011 4.2:-29835630 None:intergenic
TGCGGCATGAAAAGCATTAT+CGG 0.451086 4.2:+29836048 MS.gene045478:CDS
GTGTTATTGTCACAGCTGTA+AGG 0.453106 4.2:+29835796 MS.gene045478:CDS
CTTGGAATTGCTGCAGAACA+TGG 0.454255 4.2:+29836446 MS.gene045478:CDS
GTATTAAGATCATGCCTGTT+GGG 0.456048 4.2:+29835391 MS.gene045478:CDS
GAACATAGGCTTCCCACAAA+TGG 0.459768 4.2:-29835020 None:intergenic
CCCAGCAATGGGATCGGGGT+CGG 0.460165 4.2:+29834528 MS.gene045478:CDS
TCTGGGAATTTCCCAGCAAT+GGG 0.460266 4.2:+29834517 MS.gene045478:CDS
GATAAACTGACCACTCTTTG+CGG 0.461574 4.2:-29837285 None:intergenic
TCAGGCAGTAAGTGTTTCTT+CGG 0.462017 4.2:+29834627 MS.gene045478:CDS
CATTGTTAGTGGACGGGGTA+GGG 0.464339 4.2:+29836388 MS.gene045478:CDS
TGCTGAAACAACACCCCAAA+TGG 0.466478 4.2:+29835574 MS.gene045478:CDS
TAAAAGGTTTGTATACGATC+TGG 0.467408 4.2:-29834485 None:intergenic
AAATTTGAAGATTCTGGCTA+TGG 0.469132 4.2:+29835545 MS.gene045478:CDS
CAGTCAAAGAGGGGTTATCT+AGG 0.470100 4.2:+29835342 MS.gene045478:CDS
GCAGTTGCTTCAACATTCCA+TGG 0.470653 4.2:-29835978 None:intergenic
CACCATGCATAGAAGAATCT+GGG 0.476735 4.2:+29838621 MS.gene045478:CDS
AATGGGATCGGGGTCGGGGA+GGG 0.477370 4.2:+29834534 MS.gene045478:CDS
ACCGCTTTGATCGCCATTTG+TGG 0.477691 4.2:+29835007 MS.gene045478:CDS
ACCCAAATATAATCATCCTC+CGG 0.481751 4.2:-29835087 None:intergenic
CGATCAGAAGAAATAGTTGA+CGG 0.482348 4.2:-29834655 None:intergenic
TGCTTCTGTATTTGCTTGCA+CGG 0.482357 4.2:+29838505 MS.gene045478:CDS
AAGTTTCCCATTCACCGTCT+TGG 0.485112 4.2:-29837058 None:intergenic
ATATAGGACTCTTCCTGTTA+GGG 0.485478 4.2:+29835212 MS.gene045478:CDS
CAGCTTGTTTGCCAGAACAT+AGG 0.487233 4.2:-29835034 None:intergenic
CCGAGGGTTATGAGTGTCCC+GGG 0.488412 4.2:+29834580 MS.gene045478:CDS
AGCAAATACAGAAGCATTGG+AGG 0.488464 4.2:-29838498 None:intergenic
TATATCTCCGATGATGGAAA+GGG 0.489420 4.2:-29835192 None:intergenic
CGACCCATGTGAATCCCAAC+AGG 0.490514 4.2:-29835405 None:intergenic
ACCCAACATACGACTGCAGC+AGG 0.490840 4.2:-29835310 None:intergenic
AATGACTGAAAGTGACAAAC+AGG 0.491293 4.2:+29838388 MS.gene045478:CDS
CCGCTTTGATCGCCATTTGT+GGG 0.494408 4.2:+29835008 MS.gene045478:CDS
GTCCTATATATCTCCGATGA+TGG 0.496938 4.2:-29835198 None:intergenic
GCCGAGGGTTATGAGTGTCC+CGG 0.498721 4.2:+29834579 MS.gene045478:CDS
AACTTTCTTCTATTTCAGAA+TGG 0.500344 4.2:-29835665 None:intergenic
TTTGTGGGAAGCCTATGTTC+TGG 0.500908 4.2:+29835023 MS.gene045478:CDS
CTACAAACAATATATTCATA+AGG 0.502334 4.2:-29835837 None:intergenic
GATATGGAGGTTCTGTATGT+TGG 0.504909 4.2:+29834799 MS.gene045478:CDS
GTAGGGATAGCTTAAGTGAA+TGG 0.505507 4.2:+29836405 MS.gene045478:CDS
TCCACCTCTGAGACAATCCC+CGG 0.508028 4.2:-29834598 None:intergenic
CCCAAATATAATCATCCTCC+GGG 0.508556 4.2:-29835086 None:intergenic
GCATAGCCCCTTTCCATCAT+CGG 0.508587 4.2:+29835185 MS.gene045478:CDS
GCTGACTTTGTCCTGTGTGT+TGG 0.508603 4.2:+29838410 MS.gene045478:CDS
AAAGAGGGGTTATCTAGGAT+TGG 0.508611 4.2:+29835347 MS.gene045478:CDS
GAATTTCCCAGCAATGGGAT+CGG 0.509309 4.2:+29834522 MS.gene045478:CDS
TGCTTTGGTTTGGCAATACA+GGG 0.511440 4.2:+29837181 MS.gene045478:CDS
GATGTCGGATGAGGAGTGTA+AGG 0.511899 4.2:+29835446 MS.gene045478:CDS
AACAGAGTGTTTGGACGACC+TGG 0.514305 4.2:+29835699 MS.gene045478:CDS
GAGCTCAAACAGCAATTTGA+AGG 0.515176 4.2:+29835474 MS.gene045478:CDS
CAGCTCTTCCTTGCCATTTG+GGG 0.515782 4.2:-29835587 None:intergenic
TTAACCCTGCTAGAGGTAAA+GGG 0.516128 4.2:+29835625 MS.gene045478:CDS
AAGAACGAAGGCGGATGCCG+AGG 0.520114 4.2:+29834563 MS.gene045478:CDS
CAATACAGGGATGCCGACCT+TGG 0.520176 4.2:+29837194 MS.gene045478:CDS
TCATTGTTAGTGGACGGGGT+AGG 0.521156 4.2:+29836387 MS.gene045478:CDS
AGACATGGAGAGGGCTTGCA+CGG 0.522594 4.2:+29836118 MS.gene045478:CDS
ATATATCTCCGATGATGGAA+AGG 0.524519 4.2:-29835193 None:intergenic
AGAGATATGACCTCTTTGCT+TGG 0.525145 4.2:-29836326 None:intergenic
GCAAGCAAATACAGAAGCAT+TGG 0.525460 4.2:-29838501 None:intergenic
GTGGTCCCAAGACGGTGAAT+GGG 0.525548 4.2:+29837052 MS.gene045478:CDS
TTACAAGAGGGCAAAGAGTA+GGG 0.528130 4.2:+29836247 MS.gene045478:CDS
TATTGTGTTTATTGACAGAT+CGG 0.528425 4.2:+29835731 MS.gene045478:CDS
CTGTTGGGATTCACATGGGT+CGG 0.529805 4.2:+29835406 MS.gene045478:CDS
TTGCTATTACAGCTTAAGGA+TGG 0.530659 4.2:+29834766 MS.gene045478:CDS
AGAACGAAGGCGGATGCCGA+GGG 0.530953 4.2:+29834564 MS.gene045478:CDS
TAGCTTTGGATTTAGAGTTG+TGG 0.534487 4.2:+29836175 MS.gene045478:CDS
CTTACAAGAGGGCAAAGAGT+AGG 0.537232 4.2:+29836246 MS.gene045478:CDS
GATACATCATCTTGTTCAGC+GGG 0.537461 4.2:-29834844 None:intergenic
ACATCAGGAGGCAGAAAAGT+GGG 0.540834 4.2:-29834898 None:intergenic
GGGCTATCCGTGTCAATCCA+TGG 0.541240 4.2:+29835961 MS.gene045478:CDS
ACGTAGTTTCTTGCAAGACA+TGG 0.542110 4.2:+29836103 MS.gene045478:CDS
AAGTTGGCAGCACCATCAAA+TGG 0.542653 4.2:-29835119 None:intergenic
GAATATATTGTTTGTAGACA+GGG 0.549934 4.2:+29835843 MS.gene045478:CDS
TGTTATGAGGATGTCGGATG+AGG 0.553523 4.2:+29835437 MS.gene045478:CDS
AGTATTAAGATCATGCCTGT+TGG 0.555153 4.2:+29835390 MS.gene045478:CDS
AAATAGAAGAAAGTTGCAGC+AGG 0.559745 4.2:+29835673 MS.gene045478:CDS
CCGACCCCGATCCCATTGCT+GGG 0.564119 4.2:-29834528 None:intergenic
AAACAAGCTGTTCTTTCAGA+AGG 0.565229 4.2:+29835047 MS.gene045478:CDS
CCCGGGACACTCATAACCCT+CGG 0.570549 4.2:-29834580 None:intergenic
ATTGTCACAGCTGTAAGGGA+TGG 0.572045 4.2:+29835801 MS.gene045478:CDS
TCCCCAGATTCTTCTATGCA+TGG 0.572909 4.2:-29838623 None:intergenic
AACATCAGGAGGCAGAAAAG+TGG 0.573267 4.2:-29834899 None:intergenic
GAAGCCATTTCAATGAGTGA+TGG 0.574264 4.2:+29836014 MS.gene045478:CDS
GAGCCTGTTGCCGCAAAGAG+TGG 0.574335 4.2:+29837275 MS.gene045478:CDS
TTGTCACAGCTGTAAGGGAT+GGG 0.578214 4.2:+29835802 MS.gene045478:CDS
CCCGGGGATTGTCTCAGAGG+TGG 0.578255 4.2:+29834597 MS.gene045478:CDS
TCTAGAGTATCAGTCAAAGA+GGG 0.581200 4.2:+29835332 MS.gene045478:CDS
TATCGTTGAAGTGAAGCCCC+AGG 0.581315 4.2:+29837304 MS.gene045478:CDS
GCATTGCAGGATGTGAGCAA+AGG 0.581846 4.2:+29838338 MS.gene045478:intron
CATGCCTGTTGGGATTCACA+TGG 0.583402 4.2:+29835401 MS.gene045478:CDS
GTCGGATTGAATCTGTTATG+AGG 0.584194 4.2:+29835424 MS.gene045478:CDS
CAGTCAAGTTTGGATTCAAG+AGG 0.585127 4.2:-29838648 None:intergenic
TGGTTCCAGTATTGAACGAA+AGG 0.595735 4.2:+29837154 MS.gene045478:CDS
CTATGGTTTCAGCTTACAAG+AGG 0.596832 4.2:+29836234 MS.gene045478:CDS
AGAAAAGAGAGGACAACAAA+GGG 0.596911 4.2:+29834716 MS.gene045478:CDS
AAGAAAAGAGAGGACAACAA+AGG 0.597247 4.2:+29834715 MS.gene045478:CDS
GTCTAGAGTATCAGTCAAAG+AGG 0.599688 4.2:+29835331 MS.gene045478:CDS
AGAAGATCCAAAACCAAGGT+CGG 0.600676 4.2:-29837207 None:intergenic
ATTTCCCAGCAATGGGATCG+GGG 0.601478 4.2:+29834524 MS.gene045478:CDS
CAACATTCCATGGATTGACA+CGG 0.605906 4.2:-29835968 None:intergenic
CTATATACAGAGGCAACTGA+TGG 0.609983 4.2:+29837134 MS.gene045478:CDS
CGGATAGCCCCACTAAGCGA+TGG 0.610821 4.2:-29835948 None:intergenic
TAATAAGAGTCCAAGCAAAG+AGG 0.616472 4.2:+29836316 MS.gene045478:CDS
TGTCCCGGGGATTGTCTCAG+AGG 0.616643 4.2:+29834594 MS.gene045478:CDS
GTATCCCTTTACCTCTAGCA+GGG 0.618579 4.2:-29835629 None:intergenic
TGACAATAACACACTCAGCA+AGG 0.622584 4.2:-29835785 None:intergenic
GGATGAGGAGTGTAAGGCAA+GGG 0.623073 4.2:+29835452 MS.gene045478:CDS
CAGATAGTTAACCCTGCTAG+AGG 0.623112 4.2:+29835618 MS.gene045478:CDS
TAGTTAGTAGTGCAATCTCA+AGG 0.623819 4.2:+29838465 MS.gene045478:CDS
CAGAACATGGATACTTCTTG+AGG 0.624436 4.2:+29836459 MS.gene045478:CDS
AAACAACACCCCAAATGGCA+AGG 0.628534 4.2:+29835579 MS.gene045478:CDS
TTTCTTGCAAGACATGGAGA+GGG 0.628667 4.2:+29836109 MS.gene045478:CDS
GACGGTGAATGGGAAACTTG+TGG 0.631275 4.2:+29837062 MS.gene045478:CDS
GTGATGGAGAGAAGCAGTTG+CGG 0.631761 4.2:+29836030 MS.gene045478:CDS
GTGTTCTCCATCGCTTAGTG+GGG 0.632837 4.2:+29835941 MS.gene045478:CDS
GTATGTCAGCACTCATGACG+TGG 0.632870 4.2:+29836070 MS.gene045478:CDS
ATCTGTCATCACCAACACAC+AGG 0.635325 4.2:-29838421 None:intergenic
TGGATTTCCAGAAGATATGG+AGG 0.636676 4.2:+29834786 MS.gene045478:CDS
TAGGACTCTTCCTGTTAGGG+AGG 0.637903 4.2:+29835215 MS.gene045478:CDS
AAAGAGAGGACAACAAAGGG+TGG 0.638553 4.2:+29834719 MS.gene045478:CDS
CGGATGAGGAGTGTAAGGCA+AGG 0.638820 4.2:+29835451 MS.gene045478:CDS
TTTGAAAGCTAAGAAAAGAG+AGG 0.639677 4.2:+29834705 MS.gene045478:CDS
GTTTCTTGCAAGACATGGAG+AGG 0.640852 4.2:+29836108 MS.gene045478:CDS
AAGTTTGCCAAAACATCAGG+AGG 0.642149 4.2:-29834910 None:intergenic
ATGCCTGTTGGGATTCACAT+GGG 0.644963 4.2:+29835402 MS.gene045478:CDS
GGTAGTTGAAATAATAAACC+CGG 0.646249 4.2:+29835068 MS.gene045478:CDS
AACACAATAGGTTCATAACC+AGG 0.652850 4.2:-29835717 None:intergenic
CATCAGGAGGCAGAAAAGTG+GGG 0.652893 4.2:-29834897 None:intergenic
GAATGTTGAAGCAACTGCGG+AGG 0.653258 4.2:+29835983 MS.gene045478:CDS
TGATACATCATCTTGTTCAG+CGG 0.658366 4.2:-29834845 None:intergenic
ATATCTCCGATGATGGAAAG+GGG 0.659124 4.2:-29835191 None:intergenic
CCACCTCTGAGACAATCCCC+GGG 0.659546 4.2:-29834597 None:intergenic
TGTTATTGTCACAGCTGTAA+GGG 0.659939 4.2:+29835797 MS.gene045478:CDS
TGAATCTGTTATGAGGATGT+CGG 0.662042 4.2:+29835431 MS.gene045478:CDS
ACAAATGGCGATCAAAGCGG+TGG 0.668272 4.2:-29835005 None:intergenic
ACCATGCATAGAAGAATCTG+GGG 0.671869 4.2:+29838622 MS.gene045478:CDS
TATGGTTTCAGCTTACAAGA+GGG 0.681078 4.2:+29836235 MS.gene045478:CDS
TGTAATGAAACTATATACAG+AGG 0.682097 4.2:+29837124 MS.gene045478:CDS
GGAGGGAGTTTAAAGAACGA+AGG 0.685276 4.2:+29834551 MS.gene045478:CDS
CTAGAGTATCAGTCAAAGAG+GGG 0.688713 4.2:+29835333 MS.gene045478:CDS
ATGGAATGTTGAAGCAACTG+CGG 0.690516 4.2:+29835980 MS.gene045478:CDS
TAGGATTGGAATATTACGGG+AGG 0.692571 4.2:+29835361 MS.gene045478:CDS
CGAGGGTTATGAGTGTCCCG+GGG 0.699920 4.2:+29834581 MS.gene045478:CDS
GGGAGTTTAAAGAACGAAGG+CGG 0.701696 4.2:+29834554 MS.gene045478:CDS
CCCACAAATGGCGATCAAAG+CGG 0.706904 4.2:-29835008 None:intergenic
TGGTGATGACAGATCAGATG+AGG 0.713489 4.2:+29838430 MS.gene045478:CDS
TGTGAGCAAAGGCTTAGTTG+CGG 0.713566 4.2:+29838349 MS.gene045478:CDS
CCTGAGAAGATCCAAAACCA+AGG 0.716480 4.2:-29837211 None:intergenic
AGTTGAAATAATAAACCCGG+AGG 0.724497 4.2:+29835071 MS.gene045478:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGTGAAAATAATATTTT+AGG + chr4.2:29836553-29836572 MS.gene045478:intron 10.0%
!! TTAAAATTGAAAACAGAAAA+TGG - chr4.2:29837506-29837525 None:intergenic 15.0%
!! TTGTAATATCAGAATTTATT+GGG + chr4.2:29835919-29835938 MS.gene045478:CDS 15.0%
!!! AAATTTCTGTTCTAATTTTT+TGG + chr4.2:29838088-29838107 MS.gene045478:intron 15.0%
!!! AACTTTTTAAAATGAAAACA+AGG - chr4.2:29837543-29837562 None:intergenic 15.0%
!!! TTGTTTTTACCATATAATTT+TGG + chr4.2:29838231-29838250 MS.gene045478:intron 15.0%
!! AATAAATATGCTAGAATCTT+TGG + chr4.2:29838580-29838599 MS.gene045478:CDS 20.0%
!! CTACAAACAATATATTCATA+AGG - chr4.2:29835840-29835859 None:intergenic 20.0%
!! CTTGTAATATCAGAATTTAT+TGG + chr4.2:29835918-29835937 MS.gene045478:CDS 20.0%
!! TAAATTGAAATTCATGTGTA+TGG + chr4.2:29836740-29836759 MS.gene045478:intron 20.0%
!! TTACTAAATTCTGATATCAT+TGG + chr4.2:29835252-29835271 MS.gene045478:CDS 20.0%
!!! AAATCAAATTGCTATTTAAC+AGG - chr4.2:29837711-29837730 None:intergenic 20.0%
!!! AACAATGAAAACAACATTTT+TGG - chr4.2:29836375-29836394 None:intergenic 20.0%
!!! ACAATGAAAACAACATTTTT+GGG - chr4.2:29836374-29836393 None:intergenic 20.0%
!!! GTTCTCTTCTTTTTATAATT+TGG + chr4.2:29836999-29837018 MS.gene045478:intron 20.0%
!!! TGGAACATTTTCTTATTAAA+TGG - chr4.2:29838001-29838020 None:intergenic 20.0%
! AAATTAGAACAGAAATTTGC+AGG - chr4.2:29838086-29838105 None:intergenic 25.0%
! AACTTTCTTCTATTTCAGAA+TGG - chr4.2:29835668-29835687 None:intergenic 25.0%
! AATATGTACAGAAATCCAAA+AGG + chr4.2:29837652-29837671 MS.gene045478:intron 25.0%
! AGATAATACTTTGCTTTACT+TGG - chr4.2:29838542-29838561 None:intergenic 25.0%
! AGCTTAGATAGCAATATTAA+GGG + chr4.2:29837468-29837487 MS.gene045478:intron 25.0%
! AGGTATAAATTTGAAGATTC+TGG + chr4.2:29835539-29835558 MS.gene045478:CDS 25.0%
! ATATCAAGAAAGTGAACATT+TGG - chr4.2:29836967-29836986 None:intergenic 25.0%
! CAATATATTCATAAGGAGTT+AGG - chr4.2:29835833-29835852 None:intergenic 25.0%
! GAATATATTGTTTGTAGACA+GGG + chr4.2:29835843-29835862 MS.gene045478:CDS 25.0%
! GTGTTAAAGCCAAAATTATA+TGG - chr4.2:29838243-29838262 None:intergenic 25.0%
! TAGAGAAATTGTATATACCT+GGG - chr4.2:29837324-29837343 None:intergenic 25.0%
! TATCAAGAAAGTGAACATTT+GGG - chr4.2:29836966-29836985 None:intergenic 25.0%
! TATTGTGTTTATTGACAGAT+CGG + chr4.2:29835731-29835750 MS.gene045478:CDS 25.0%
! TCAAAGTTAACAATAGGAAA+TGG - chr4.2:29837585-29837604 None:intergenic 25.0%
! TCTGTATATAGTTTCATTAC+AGG - chr4.2:29837125-29837144 None:intergenic 25.0%
! TGAATATATTGTTTGTAGAC+AGG + chr4.2:29835842-29835861 MS.gene045478:CDS 25.0%
! TGTAATGAAACTATATACAG+AGG + chr4.2:29837124-29837143 MS.gene045478:CDS 25.0%
! TGTTATATCTTACGTAAAGT+TGG - chr4.2:29837934-29837953 None:intergenic 25.0%
! TTATAAAAAGAAGAGAACAC+AGG - chr4.2:29836997-29837016 None:intergenic 25.0%
!! AAGTAAAGCAAAGTATTATC+TGG + chr4.2:29838541-29838560 MS.gene045478:CDS 25.0%
!! ATTTTCTTATTAAATGGCCA+TGG - chr4.2:29837995-29838014 None:intergenic 25.0%
!! CAATGAAAACAACATTTTTG+GGG - chr4.2:29836373-29836392 None:intergenic 25.0%
!! CTGTTTTCAAAGTTAACAAT+AGG - chr4.2:29837591-29837610 None:intergenic 25.0%
!! GTATACAAACCTTTTAGATT+TGG + chr4.2:29834492-29834511 MS.gene045478:CDS 25.0%
!! TAACAATTTGAGCATTTTTC+AGG + chr4.2:29837030-29837049 MS.gene045478:intron 25.0%
!! TATCTAGGATTGGAATATTA+CGG + chr4.2:29835357-29835376 MS.gene045478:CDS 25.0%
!!! AAAGTGTTTTAAAGTCCAAT+TGG + chr4.2:29836699-29836718 MS.gene045478:intron 25.0%
!!! AATGTTGTTTTCATTGTTAG+TGG + chr4.2:29836377-29836396 MS.gene045478:CDS 25.0%
!!! AGTTTTTTAGAGAAGCTTTT+TGG + chr4.2:29838161-29838180 MS.gene045478:intron 25.0%
!!! ATTGAGAGCTTTTTAAAGTT+AGG - chr4.2:29836209-29836228 None:intergenic 25.0%
!!! TAGCTTTAGATAACATTGTT+AGG - chr4.2:29837881-29837900 None:intergenic 25.0%
!!! TTGAGAGCTTTTTAAAGTTA+GGG - chr4.2:29836208-29836227 None:intergenic 25.0%
!!! TTTTTTCTTTCTTTCTACCA+TGG + chr4.2:29837975-29837994 MS.gene045478:intron 25.0%
ACAGCATCATTTATGTCTAA+AGG - chr4.2:29838135-29838154 None:intergenic 30.0%
ACCTTCTTAGAAAAAGATGT+TGG + chr4.2:29836141-29836160 MS.gene045478:CDS 30.0%
AGACAAGGATAAAATAGATC+AGG - chr4.2:29838043-29838062 None:intergenic 30.0%
AGAGAAATTGTATATACCTG+GGG - chr4.2:29837323-29837342 None:intergenic 30.0%
CAAACAATATATCACTCAAC+AGG - chr4.2:29836861-29836880 None:intergenic 30.0%
CCTTCTTAGAAAAAGATGTT+GGG + chr4.2:29836142-29836161 MS.gene045478:CDS 30.0%
CTTCTTAGAAAAAGATGTTG+GGG + chr4.2:29836143-29836162 MS.gene045478:CDS 30.0%
GAGCTTAGATAGCAATATTA+AGG + chr4.2:29837467-29837486 MS.gene045478:intron 30.0%
GATAAAATAGATCAGGTTCT+TGG - chr4.2:29838036-29838055 None:intergenic 30.0%
GATCTGTCAATAAACACAAT+AGG - chr4.2:29835732-29835751 None:intergenic 30.0%
GGTAGTTGAAATAATAAACC+CGG + chr4.2:29835068-29835087 MS.gene045478:CDS 30.0%
GTAGAGAAATTGTATATACC+TGG - chr4.2:29837325-29837344 None:intergenic 30.0%
TAAAAGGTTTGTATACGATC+TGG - chr4.2:29834488-29834507 None:intergenic 30.0%
TAAAAGTTTGCCAAAACATC+AGG - chr4.2:29834916-29834935 None:intergenic 30.0%
TAAAGCATACACTATCCAAT+TGG - chr4.2:29836717-29836736 None:intergenic 30.0%
TTTACTCCCTGTAAAAAACT+TGG + chr4.2:29836428-29836447 MS.gene045478:CDS 30.0%
TTTATGTCTAAAGGAACAAC+AGG - chr4.2:29838126-29838145 None:intergenic 30.0%
TTTGAAAGCTAAGAAAAGAG+AGG + chr4.2:29834705-29834724 MS.gene045478:CDS 30.0%
TTTGCTTGGACTCTTATTAA+TGG - chr4.2:29836315-29836334 None:intergenic 30.0%
! AAATTTGAAGATTCTGGCTA+TGG + chr4.2:29835545-29835564 MS.gene045478:CDS 30.0%
! ATCTAGGATTGGAATATTAC+GGG + chr4.2:29835358-29835377 MS.gene045478:CDS 30.0%
! ATGAATCATCATTTTCCCAA+AGG - chr4.2:29838306-29838325 None:intergenic 30.0%
! CAATGTTATCTAAAGCTAGT+AGG + chr4.2:29837883-29837902 MS.gene045478:intron 30.0%
! CTCTTATTAATGGAGTTTTG+TGG - chr4.2:29836305-29836324 None:intergenic 30.0%
! GACGATATGGACATTTTTAA+AGG + chr4.2:29835519-29835538 MS.gene045478:CDS 30.0%
! GATCTATTTTATCCTTGTCT+TGG + chr4.2:29838043-29838062 MS.gene045478:intron 30.0%
! GGTAACTTGTAATGAAAAAG+TGG - chr4.2:29834967-29834986 None:intergenic 30.0%
! TGAATCATCATTTTCCCAAA+GGG - chr4.2:29838305-29838324 None:intergenic 30.0%
! TGGCTTTTATCAGTTGAAAA+CGG - chr4.2:29834988-29835007 None:intergenic 30.0%
! TTGTTTTCATTGTTAGTGGA+CGG + chr4.2:29836381-29836400 MS.gene045478:CDS 30.0%
!! CGAAGTCATTTTATAGGAAA+TGG - chr4.2:29837799-29837818 None:intergenic 30.0%
!! CGTTTTAACAGGGTTAAAAT+GGG + chr4.2:29835153-29835172 MS.gene045478:CDS 30.0%
!! GGTTTTCGAAGTCATTTTAT+AGG - chr4.2:29837805-29837824 None:intergenic 30.0%
!! GTTTTGGCAAACTTTTATGA+TGG + chr4.2:29834919-29834938 MS.gene045478:CDS 30.0%
!! TCTCTTTTCTTAGCTTTCAA+AGG - chr4.2:29834706-29834725 None:intergenic 30.0%
!! TTCTTTGCTATTACAGCTTA+AGG + chr4.2:29834762-29834781 MS.gene045478:CDS 30.0%
!!! AGATCATCTAGAAAGTGTTT+TGG + chr4.2:29837247-29837266 MS.gene045478:CDS 30.0%
!!! AGCAATTCCAAGTTTTTTAC+AGG - chr4.2:29836438-29836457 None:intergenic 30.0%
!!! GCAATTCCAAGTTTTTTACA+GGG - chr4.2:29836437-29836456 None:intergenic 30.0%
!!! TAGGCAACTTTTTCAGTAAT+TGG - chr4.2:29835759-29835778 None:intergenic 30.0%
AAACAAGCTGTTCTTTCAGA+AGG + chr4.2:29835047-29835066 MS.gene045478:CDS 35.0%
AAACGCCTTCTTAGAAAAGT+TGG - chr4.2:29835138-29835157 None:intergenic 35.0%
AAAGCTCTCAATTGATGCTA+TGG + chr4.2:29836217-29836236 MS.gene045478:CDS 35.0%
AAATAGAAGAAAGTTGCAGC+AGG + chr4.2:29835673-29835692 MS.gene045478:CDS 35.0%
AACACAATAGGTTCATAACC+AGG - chr4.2:29835720-29835739 None:intergenic 35.0%
AAGAAAAGAGAGGACAACAA+AGG + chr4.2:29834715-29834734 MS.gene045478:CDS 35.0%
AAGCCTGTGATAACAGAAAA+TGG + chr4.2:29837621-29837640 MS.gene045478:intron 35.0%
AATAACTTCCTTTCATCCCT+AGG + chr4.2:29836648-29836667 MS.gene045478:intron 35.0%
AATGACTGAAAGTGACAAAC+AGG + chr4.2:29838388-29838407 MS.gene045478:CDS 35.0%
AATGTCAGATATCCAAGACA+AGG - chr4.2:29838058-29838077 None:intergenic 35.0%
ACCATCATAGTCCAACAAAA+TGG - chr4.2:29836273-29836292 None:intergenic 35.0%
ACCCAAATATAATCATCCTC+CGG - chr4.2:29835090-29835109 None:intergenic 35.0%
ACTTTCCTTTCGTTCAATAC+TGG - chr4.2:29837162-29837181 None:intergenic 35.0%
AGAAAAAGATGTTGGGGAAT+AGG + chr4.2:29836149-29836168 MS.gene045478:CDS 35.0%
AGAAAAGAGAGGACAACAAA+GGG + chr4.2:29834716-29834735 MS.gene045478:CDS 35.0%
AGCCTGTGATAACAGAAAAT+GGG + chr4.2:29837622-29837641 MS.gene045478:intron 35.0%
AGTATTAAGATCATGCCTGT+TGG + chr4.2:29835390-29835409 MS.gene045478:CDS 35.0%
AGTTGAAATAATAAACCCGG+AGG + chr4.2:29835071-29835090 MS.gene045478:CDS 35.0%
ATATAGGACTCTTCCTGTTA+GGG + chr4.2:29835212-29835231 MS.gene045478:CDS 35.0%
ATCGTCAATACCAAGCAAAA+TGG - chr4.2:29835505-29835524 None:intergenic 35.0%
ATTACAAGCATGCTCTTCTT+TGG - chr4.2:29835906-29835925 None:intergenic 35.0%
CGATCAGAAGAAATAGTTGA+CGG - chr4.2:29834658-29834677 None:intergenic 35.0%
CTGCATTCAGACAAGAAAAA+TGG - chr4.2:29836620-29836639 None:intergenic 35.0%
GAAAATGTTCCATCTAACCA+TGG + chr4.2:29838009-29838028 MS.gene045478:intron 35.0%
GGTTCATGATTACCATTTGA+TGG + chr4.2:29835107-29835126 MS.gene045478:CDS 35.0%
GTAAAAACAAACTGCTATGC+TGG - chr4.2:29838221-29838240 None:intergenic 35.0%
GTATTAAGATCATGCCTGTT+GGG + chr4.2:29835391-29835410 MS.gene045478:CDS 35.0%
TAATAAGAGTCCAAGCAAAG+AGG + chr4.2:29836316-29836335 MS.gene045478:CDS 35.0%
TACAGCACAAGTTCATAGTA+TGG - chr4.2:29836584-29836603 None:intergenic 35.0%
TATATAGGACTCTTCCTGTT+AGG + chr4.2:29835211-29835230 MS.gene045478:CDS 35.0%
TATGGTTTCAGCTTACAAGA+GGG + chr4.2:29836235-29836254 MS.gene045478:CDS 35.0%
TCTTATACCATTTGCATTGC+AGG + chr4.2:29838325-29838344 MS.gene045478:intron 35.0%
TGAATCTGTTATGAGGATGT+CGG + chr4.2:29835431-29835450 MS.gene045478:CDS 35.0%
TGAGAACATCAGTTGTCTTA+TGG + chr4.2:29836814-29836833 MS.gene045478:intron 35.0%
TGATACATCATCTTGTTCAG+CGG - chr4.2:29834848-29834867 None:intergenic 35.0%
TGATGTATCACAGTATTTGC+TGG + chr4.2:29834858-29834877 MS.gene045478:CDS 35.0%
TGTTATTGTCACAGCTGTAA+GGG + chr4.2:29835797-29835816 MS.gene045478:CDS 35.0%
TTACAAGCATGCTCTTCTTT+GGG - chr4.2:29835905-29835924 None:intergenic 35.0%
TTCCATCATCGGAGATATAT+AGG + chr4.2:29835196-29835215 MS.gene045478:CDS 35.0%
TTTATGATGGCTTCTGCAAA+AGG + chr4.2:29834932-29834951 MS.gene045478:CDS 35.0%
! AACTTGCTTTCACCATGTTT+CGG - chr4.2:29837827-29837846 None:intergenic 35.0%
! AGCAATATTAAGGGCATGAT+TGG + chr4.2:29837477-29837496 MS.gene045478:intron 35.0%
! CAAAGAGGTCATATCTCTTT+TGG + chr4.2:29836331-29836350 MS.gene045478:CDS 35.0%
! GAAGGAAAAACCATTTTGCT+TGG + chr4.2:29835492-29835511 MS.gene045478:CDS 35.0%
! GAATCATCATTTTCCCAAAG+GGG - chr4.2:29838304-29838323 None:intergenic 35.0%
! GTAATTGCTCTGATTTTGGA+TGG + chr4.2:29837084-29837103 MS.gene045478:CDS 35.0%
! TCTAGAGTATCAGTCAAAGA+GGG + chr4.2:29835332-29835351 MS.gene045478:CDS 35.0%
! TGTGGTAATTGCTCTGATTT+TGG + chr4.2:29837080-29837099 MS.gene045478:CDS 35.0%
! TTCCCATTTTCTGTTATCAC+AGG - chr4.2:29837627-29837646 None:intergenic 35.0%
! TTGCTATTACAGCTTAAGGA+TGG + chr4.2:29834766-29834785 MS.gene045478:CDS 35.0%
!! AACCTTTTAGATTTGGCTTC+TGG + chr4.2:29834499-29834518 MS.gene045478:CDS 35.0%
!! ACCTTTTAGATTTGGCTTCT+GGG + chr4.2:29834500-29834519 MS.gene045478:CDS 35.0%
!! ATATATCTCCGATGATGGAA+AGG - chr4.2:29835196-29835215 None:intergenic 35.0%
!! CCCAACATCTTTTTCTAAGA+AGG - chr4.2:29836145-29836164 None:intergenic 35.0%
!! CTAAAATGCATTCTGGAGTT+TGG + chr4.2:29837417-29837436 MS.gene045478:intron 35.0%
!! CTCCAGAATGCATTTTAGAA+AGG - chr4.2:29837415-29837434 None:intergenic 35.0%
!! GCGTTTTAACAGGGTTAAAA+TGG + chr4.2:29835152-29835171 MS.gene045478:CDS 35.0%
!! GTCCTTTCTAAAATGCATTC+TGG + chr4.2:29837410-29837429 MS.gene045478:intron 35.0%
!! TAGCTTTGGATTTAGAGTTG+TGG + chr4.2:29836175-29836194 MS.gene045478:CDS 35.0%
!! TATATCTCCGATGATGGAAA+GGG - chr4.2:29835195-29835214 None:intergenic 35.0%
!! TGTTTTCATTGTTAGTGGAC+GGG + chr4.2:29836382-29836401 MS.gene045478:CDS 35.0%
!! TTTGCTTGGTATTGACGATA+TGG + chr4.2:29835506-29835525 MS.gene045478:CDS 35.0%
!!! CAATTTGAGCATTTTTCAGG+TGG + chr4.2:29837033-29837052 MS.gene045478:intron 35.0%
!!! TCTAAGAAGGCGTTTTAACA+GGG + chr4.2:29835143-29835162 MS.gene045478:CDS 35.0%
!!! TTCTAAGAAGGCGTTTTAAC+AGG + chr4.2:29835142-29835161 MS.gene045478:CDS 35.0%
AAGTTTGCCAAAACATCAGG+AGG - chr4.2:29834913-29834932 None:intergenic 40.0%
AATAGCTCTTGTTCAGACCT+AGG - chr4.2:29836668-29836687 None:intergenic 40.0%
ACAACTGATGTTCTCAACTC+TGG - chr4.2:29836810-29836829 None:intergenic 40.0%
ACCATGCATAGAAGAATCTG+GGG + chr4.2:29838622-29838641 MS.gene045478:CDS 40.0%
ACCCGGAGGATGATTATATT+TGG + chr4.2:29835085-29835104 MS.gene045478:CDS 40.0%
ACGTAGTTTCTTGCAAGACA+TGG + chr4.2:29836103-29836122 MS.gene045478:CDS 40.0%
ACTTGCTTTCACCATGTTTC+GGG - chr4.2:29837826-29837845 None:intergenic 40.0%
AGAAATCCAAAAGGTCCCTA+GGG + chr4.2:29837661-29837680 MS.gene045478:intron 40.0%
AGAAGATCCAAAACCAAGGT+CGG - chr4.2:29837210-29837229 None:intergenic 40.0%
AGAGATATGACCTCTTTGCT+TGG - chr4.2:29836329-29836348 None:intergenic 40.0%
ATAGCTCTTGTTCAGACCTA+GGG - chr4.2:29836667-29836686 None:intergenic 40.0%
ATGGAATGTTGAAGCAACTG+CGG + chr4.2:29835980-29835999 MS.gene045478:CDS 40.0%
ATGTCTAAAGGAACAACAGG+AGG - chr4.2:29838123-29838142 None:intergenic 40.0%
CAACAAATTCCCGACAACTA+AGG - chr4.2:29837910-29837929 None:intergenic 40.0%
CACCATGCATAGAAGAATCT+GGG + chr4.2:29838621-29838640 MS.gene045478:CDS 40.0%
CAGAACATGGATACTTCTTG+AGG + chr4.2:29836459-29836478 MS.gene045478:CDS 40.0%
CCCAAATATAATCATCCTCC+GGG - chr4.2:29835089-29835108 None:intergenic 40.0%
CCCGGAGGATGATTATATTT+GGG + chr4.2:29835086-29835105 MS.gene045478:CDS 40.0%
CTATATACAGAGGCAACTGA+TGG + chr4.2:29837134-29837153 MS.gene045478:CDS 40.0%
CTATGGTTTCAGCTTACAAG+AGG + chr4.2:29836234-29836253 MS.gene045478:CDS 40.0%
CTCTCCATCACTCATTGAAA+TGG - chr4.2:29836021-29836040 None:intergenic 40.0%
CTGAACAAGAGCTATTACGT+GGG + chr4.2:29836672-29836691 MS.gene045478:intron 40.0%
GAAACATGGTGAAAGCAAGT+TGG + chr4.2:29837826-29837845 MS.gene045478:intron 40.0%
GAAGCCATTTCAATGAGTGA+TGG + chr4.2:29836014-29836033 MS.gene045478:CDS 40.0%
GACGAGCATAATCGAAAGTA+TGG - chr4.2:29835281-29835300 None:intergenic 40.0%
GAGCTCAAACAGCAATTTGA+AGG + chr4.2:29835474-29835493 MS.gene045478:CDS 40.0%
GATAAACTGACCACTCTTTG+CGG - chr4.2:29837288-29837307 None:intergenic 40.0%
GATACATCATCTTGTTCAGC+GGG - chr4.2:29834847-29834866 None:intergenic 40.0%
GATATGGAGGTTCTGTATGT+TGG + chr4.2:29834799-29834818 MS.gene045478:CDS 40.0%
GATCAATGCAGATCCATACA+TGG - chr4.2:29836909-29836928 None:intergenic 40.0%
GCTTCTGCAAAAGGCAATTA+TGG + chr4.2:29834941-29834960 MS.gene045478:CDS 40.0%
GTAGGGATAGCTTAAGTGAA+TGG + chr4.2:29836405-29836424 MS.gene045478:CDS 40.0%
GTCCTATATATCTCCGATGA+TGG - chr4.2:29835201-29835220 None:intergenic 40.0%
GTCGGATTGAATCTGTTATG+AGG + chr4.2:29835424-29835443 MS.gene045478:CDS 40.0%
GTTTGTAGACAGGGAATATC+TGG + chr4.2:29835852-29835871 MS.gene045478:CDS 40.0%
TACAGAACCTCCATATCTTC+TGG - chr4.2:29834796-29834815 None:intergenic 40.0%
TAGGATTGGAATATTACGGG+AGG + chr4.2:29835361-29835380 MS.gene045478:CDS 40.0%
TATTGTGCTACAACCCCTTT+GGG + chr4.2:29838288-29838307 MS.gene045478:intron 40.0%
TCACCATGCATAGAAGAATC+TGG + chr4.2:29838620-29838639 MS.gene045478:CDS 40.0%
TCAGGCAGTAAGTGTTTCTT+CGG + chr4.2:29834627-29834646 MS.gene045478:CDS 40.0%
TCCCAGAAGCCAAATCTAAA+AGG - chr4.2:29834504-29834523 None:intergenic 40.0%
TCTGAACAAGAGCTATTACG+TGG + chr4.2:29836671-29836690 MS.gene045478:intron 40.0%
TGAACAAGAGCTATTACGTG+GGG + chr4.2:29836673-29836692 MS.gene045478:intron 40.0%
TGACAATAACACACTCAGCA+AGG - chr4.2:29835788-29835807 None:intergenic 40.0%
TGCTTCTGTATTTGCTTGCA+CGG + chr4.2:29838505-29838524 MS.gene045478:CDS 40.0%
TGGATTTCCAGAAGATATGG+AGG + chr4.2:29834786-29834805 MS.gene045478:CDS 40.0%
TTAACCCTGCTAGAGGTAAA+GGG + chr4.2:29835625-29835644 MS.gene045478:CDS 40.0%
TTACAAGAGGGCAAAGAGTA+GGG + chr4.2:29836247-29836266 MS.gene045478:CDS 40.0%
TTATTGTGCTACAACCCCTT+TGG + chr4.2:29838287-29838306 MS.gene045478:intron 40.0%
TTCGCATTGGAACTTGATTC+AGG - chr4.2:29835879-29835898 None:intergenic 40.0%
TTGATCACTTCCTCCATGTA+TGG + chr4.2:29836893-29836912 MS.gene045478:intron 40.0%
TTTAGTATCTCCTCCCTAAC+AGG - chr4.2:29835228-29835247 None:intergenic 40.0%
TTTCTTGCAAGACATGGAGA+GGG + chr4.2:29836109-29836128 MS.gene045478:CDS 40.0%
! AAAGAGGGGTTATCTAGGAT+TGG + chr4.2:29835347-29835366 MS.gene045478:CDS 40.0%
! CAACATTCCATGGATTGACA+CGG - chr4.2:29835971-29835990 None:intergenic 40.0%
! CTAGAGTATCAGTCAAAGAG+GGG + chr4.2:29835333-29835352 MS.gene045478:CDS 40.0%
! GCAAGCAAATACAGAAGCAT+TGG - chr4.2:29838504-29838523 None:intergenic 40.0%
! GGATGGATTTCCAGAAGATA+TGG + chr4.2:29834783-29834802 MS.gene045478:CDS 40.0%
! GTCTAGAGTATCAGTCAAAG+AGG + chr4.2:29835331-29835350 MS.gene045478:CDS 40.0%
! GTGTTATTGTCACAGCTGTA+AGG + chr4.2:29835796-29835815 MS.gene045478:CDS 40.0%
! TGGTTCCAGTATTGAACGAA+AGG + chr4.2:29837154-29837173 MS.gene045478:CDS 40.0%
! TTTTCTGCCTCCTGATGTTT+TGG + chr4.2:29834903-29834922 MS.gene045478:CDS 40.0%
! TTTTGGATCTTCTCAGGCTA+AGG + chr4.2:29837217-29837236 MS.gene045478:CDS 40.0%
!! AAAGAGTAGGGCCATTTTGT+TGG + chr4.2:29836259-29836278 MS.gene045478:CDS 40.0%
!! ACAAAGGGTGGAGTTTTAGT+TGG + chr4.2:29834731-29834750 MS.gene045478:CDS 40.0%
!! AGCAAATACAGAAGCATTGG+AGG - chr4.2:29838501-29838520 None:intergenic 40.0%
!! ATATCTCCGATGATGGAAAG+GGG - chr4.2:29835194-29835213 None:intergenic 40.0%
!! GAAAGGAAAGTGCTTTGGTT+TGG + chr4.2:29837171-29837190 MS.gene045478:CDS 40.0%
!! GCCATTTTGTTGGACTATGA+TGG + chr4.2:29836269-29836288 MS.gene045478:CDS 40.0%
!! GTTTTCATTGTTAGTGGACG+GGG + chr4.2:29836383-29836402 MS.gene045478:CDS 40.0%
!! TGAACGAAAGGAAAGTGCTT+TGG + chr4.2:29837166-29837185 MS.gene045478:CDS 40.0%
!! TGCGGCATGAAAAGCATTAT+CGG + chr4.2:29836048-29836067 MS.gene045478:CDS 40.0%
!! TGCTGCCAACTTTTCTAAGA+AGG + chr4.2:29835130-29835149 MS.gene045478:CDS 40.0%
!! TGCTTTGGTTTGGCAATACA+GGG + chr4.2:29837181-29837200 MS.gene045478:CDS 40.0%
!!! GTGGAGTTTTAGTTGGAATG+AGG + chr4.2:29834738-29834757 MS.gene045478:CDS 40.0%
AAACAACACCCCAAATGGCA+AGG + chr4.2:29835579-29835598 MS.gene045478:CDS 45.0%
AAAGAGAGGACAACAAAGGG+TGG + chr4.2:29834719-29834738 MS.gene045478:CDS 45.0%
AACAGCTCTTCCTTGCCATT+TGG - chr4.2:29835592-29835611 None:intergenic 45.0%
AACATCAGGAGGCAGAAAAG+TGG - chr4.2:29834902-29834921 None:intergenic 45.0%
AAGTTGGCAGCACCATCAAA+TGG - chr4.2:29835122-29835141 None:intergenic 45.0%
AAGTTTCCCATTCACCGTCT+TGG - chr4.2:29837061-29837080 None:intergenic 45.0%
AATTTCCCAGCAATGGGATC+GGG + chr4.2:29834523-29834542 MS.gene045478:CDS 45.0%
ACACTCAGCAAGGCTGTAAT+AGG - chr4.2:29835778-29835797 None:intergenic 45.0%
ACATCAGGAGGCAGAAAAGT+GGG - chr4.2:29834901-29834920 None:intergenic 45.0%
AGTTTCCCATTCACCGTCTT+GGG - chr4.2:29837060-29837079 None:intergenic 45.0%
ATCTGTCATCACCAACACAC+AGG - chr4.2:29838424-29838443 None:intergenic 45.0%
ATGCCTGTTGGGATTCACAT+GGG + chr4.2:29835402-29835421 MS.gene045478:CDS 45.0%
ATTGTCACAGCTGTAAGGGA+TGG + chr4.2:29835801-29835820 MS.gene045478:CDS 45.0%
CAATGCAGATCCATACATGG+AGG - chr4.2:29836906-29836925 None:intergenic 45.0%
CAGAAATCCAAAAGGTCCCT+AGG + chr4.2:29837660-29837679 MS.gene045478:intron 45.0%
CAGATAGTTAACCCTGCTAG+AGG + chr4.2:29835618-29835637 MS.gene045478:CDS 45.0%
CAGTCAAAGAGGGGTTATCT+AGG + chr4.2:29835342-29835361 MS.gene045478:CDS 45.0%
CCTGAGAAGATCCAAAACCA+AGG - chr4.2:29837214-29837233 None:intergenic 45.0%
CTAGTAGGTCCTTAGTTGTC+GGG + chr4.2:29837898-29837917 MS.gene045478:intron 45.0%
CTCACATCCTGCAATGCAAA+TGG - chr4.2:29838335-29838354 None:intergenic 45.0%
CTCTAGCAGGGTTAACTATC+TGG - chr4.2:29835620-29835639 None:intergenic 45.0%
CTGAAACCAATCAGACCCTA+GGG - chr4.2:29837679-29837698 None:intergenic 45.0%
CTTACAAGAGGGCAAAGAGT+AGG + chr4.2:29836246-29836265 MS.gene045478:CDS 45.0%
CTTCTTTGGGCTATTCGCAT+TGG - chr4.2:29835892-29835911 None:intergenic 45.0%
CTTGGAATTGCTGCAGAACA+TGG + chr4.2:29836446-29836465 MS.gene045478:CDS 45.0%
GAACATAGGCTTCCCACAAA+TGG - chr4.2:29835023-29835042 None:intergenic 45.0%
GAATTTCCCAGCAATGGGAT+CGG + chr4.2:29834522-29834541 MS.gene045478:CDS 45.0%
GACTTCGAAAACCCGAAACA+TGG + chr4.2:29837812-29837831 MS.gene045478:intron 45.0%
GCAGTTGCTTCAACATTCCA+TGG - chr4.2:29835981-29836000 None:intergenic 45.0%
GCTAGTAGGTCCTTAGTTGT+CGG + chr4.2:29837897-29837916 MS.gene045478:intron 45.0%
GGAGGGAGTTTAAAGAACGA+AGG + chr4.2:29834551-29834570 MS.gene045478:CDS 45.0%
GGGAGTTTAAAGAACGAAGG+CGG + chr4.2:29834554-29834573 MS.gene045478:CDS 45.0%
GTATCCCTTTACCTCTAGCA+GGG - chr4.2:29835632-29835651 None:intergenic 45.0%
GTTAACCCTGCTAGAGGTAA+AGG + chr4.2:29835624-29835643 MS.gene045478:CDS 45.0%
GTTCTTGGTCCATGGTTAGA+TGG - chr4.2:29838021-29838040 None:intergenic 45.0%
GTTTCTTGCAAGACATGGAG+AGG + chr4.2:29836108-29836127 MS.gene045478:CDS 45.0%
TAGATCAGGTTCTTGGTCCA+TGG - chr4.2:29838029-29838048 None:intergenic 45.0%
TCCCCAGATTCTTCTATGCA+TGG - chr4.2:29838626-29838645 None:intergenic 45.0%
TCTGGGAATTTCCCAGCAAT+GGG + chr4.2:29834517-29834536 MS.gene045478:CDS 45.0%
TCTGTATTTGCTTGCACGGT+TGG + chr4.2:29838509-29838528 MS.gene045478:CDS 45.0%
TGCTGAAACAACACCCCAAA+TGG + chr4.2:29835574-29835593 MS.gene045478:CDS 45.0%
TGGGGAATAGGTCTTAGCTT+TGG + chr4.2:29836161-29836180 MS.gene045478:CDS 45.0%
TGTATCCCTTTACCTCTAGC+AGG - chr4.2:29835633-29835652 None:intergenic 45.0%
TGTGAGCAAAGGCTTAGTTG+CGG + chr4.2:29838349-29838368 MS.gene045478:CDS 45.0%
TGTTATGAGGATGTCGGATG+AGG + chr4.2:29835437-29835456 MS.gene045478:CDS 45.0%
TGTTCAGACCTAGGGATGAA+AGG - chr4.2:29836659-29836678 None:intergenic 45.0%
TTGTCACAGCTGTAAGGGAT+GGG + chr4.2:29835802-29835821 MS.gene045478:CDS 45.0%
TTTGTGGGAAGCCTATGTTC+TGG + chr4.2:29835023-29835042 MS.gene045478:CDS 45.0%
! ACAGCTCTTCCTTGCCATTT+GGG - chr4.2:29835591-29835610 None:intergenic 45.0%
! AGCAGGATCAACAGAGTGTT+TGG + chr4.2:29835690-29835709 MS.gene045478:CDS 45.0%
! CAGCTTGTTTGCCAGAACAT+AGG - chr4.2:29835037-29835056 None:intergenic 45.0%
! TCTGAAACCAATCAGACCCT+AGG - chr4.2:29837680-29837699 None:intergenic 45.0%
! TGGTGATGACAGATCAGATG+AGG + chr4.2:29838430-29838449 MS.gene045478:CDS 45.0%
! TTCTGGGAATTTCCCAGCAA+TGG + chr4.2:29834516-29834535 MS.gene045478:CDS 45.0%
!! GTGCTTTGGTTTGGCAATAC+AGG + chr4.2:29837180-29837199 MS.gene045478:CDS 45.0%
!!! CCTTGGTTTTGGATCTTCTC+AGG + chr4.2:29837211-29837230 MS.gene045478:CDS 45.0%
!!! TTTTTCAGGTGGTCCCAAGA+CGG + chr4.2:29837044-29837063 MS.gene045478:intron 45.0%
AAAGGTCCCTAGGGTCTGAT+TGG + chr4.2:29837670-29837689 MS.gene045478:intron 50.0%
ACAAATGGCGATCAAAGCGG+TGG - chr4.2:29835008-29835027 None:intergenic 50.0%
ACCGCTTTGATCGCCATTTG+TGG + chr4.2:29835007-29835026 MS.gene045478:CDS 50.0%
ACTCAACAGGAACTTCTCCC+TGG - chr4.2:29836848-29836867 None:intergenic 50.0%
ATTTCCCAGCAATGGGATCG+GGG + chr4.2:29834524-29834543 MS.gene045478:CDS 50.0%
CATCAGGAGGCAGAAAAGTG+GGG - chr4.2:29834900-29834919 None:intergenic 50.0%
CATGCCTGTTGGGATTCACA+TGG + chr4.2:29835401-29835420 MS.gene045478:CDS 50.0%
CCCACAAATGGCGATCAAAG+CGG - chr4.2:29835011-29835030 None:intergenic 50.0%
CCGCTTTGATCGCCATTTGT+GGG + chr4.2:29835008-29835027 MS.gene045478:CDS 50.0%
CTCAGAGGTGGATGATGATC+AGG + chr4.2:29834609-29834628 MS.gene045478:CDS 50.0%
CTGTTGGGATTCACATGGGT+CGG + chr4.2:29835406-29835425 MS.gene045478:CDS 50.0%
GAATGTTGAAGCAACTGCGG+AGG + chr4.2:29835983-29836002 MS.gene045478:CDS 50.0%
GACGGTGAATGGGAAACTTG+TGG + chr4.2:29837062-29837081 MS.gene045478:CDS 50.0%
GCATAGCCCCTTTCCATCAT+CGG + chr4.2:29835185-29835204 MS.gene045478:CDS 50.0%
GCATTGCAGGATGTGAGCAA+AGG + chr4.2:29838338-29838357 MS.gene045478:intron 50.0%
GGTGTTCTCCATCGCTTAGT+GGG + chr4.2:29835940-29835959 MS.gene045478:CDS 50.0%
GTATGTCAGCACTCATGACG+TGG + chr4.2:29836070-29836089 MS.gene045478:CDS 50.0%
GTCTTATGGCAGTCATGCCA+GGG + chr4.2:29836828-29836847 MS.gene045478:intron 50.0%
GTGTTCTCCATCGCTTAGTG+GGG + chr4.2:29835941-29835960 MS.gene045478:CDS 50.0%
TAGGACTCTTCCTGTTAGGG+AGG + chr4.2:29835215-29835234 MS.gene045478:CDS 50.0%
TATCGTTGAAGTGAAGCCCC+AGG + chr4.2:29837304-29837323 MS.gene045478:CDS 50.0%
TCCTGCTGCAGTCGTATGTT+GGG + chr4.2:29835309-29835328 MS.gene045478:CDS 50.0%
TGTCTTATGGCAGTCATGCC+AGG + chr4.2:29836827-29836846 MS.gene045478:intron 50.0%
TTCCTGCTGCAGTCGTATGT+TGG + chr4.2:29835308-29835327 MS.gene045478:CDS 50.0%
! AACAGAGTGTTTGGACGACC+TGG + chr4.2:29835699-29835718 MS.gene045478:CDS 50.0%
! ATCAGACCCTAGGGACCTTT+TGG - chr4.2:29837670-29837689 None:intergenic 50.0%
! CAGCTCTTCCTTGCCATTTG+GGG - chr4.2:29835590-29835609 None:intergenic 50.0%
! CATTGTTAGTGGACGGGGTA+GGG + chr4.2:29836388-29836407 MS.gene045478:CDS 50.0%
! GATGTCGGATGAGGAGTGTA+AGG + chr4.2:29835446-29835465 MS.gene045478:CDS 50.0%
! GCTGACTTTGTCCTGTGTGT+TGG + chr4.2:29838410-29838429 MS.gene045478:CDS 50.0%
! GGATGAGGAGTGTAAGGCAA+GGG + chr4.2:29835452-29835471 MS.gene045478:CDS 50.0%
! GTGATGGAGAGAAGCAGTTG+CGG + chr4.2:29836030-29836049 MS.gene045478:CDS 50.0%
! TCATTGTTAGTGGACGGGGT+AGG + chr4.2:29836387-29836406 MS.gene045478:CDS 50.0%
ACCCAACATACGACTGCAGC+AGG - chr4.2:29835313-29835332 None:intergenic 55.0%
AGACATGGAGAGGGCTTGCA+CGG + chr4.2:29836118-29836137 MS.gene045478:CDS 55.0%
CAATACAGGGATGCCGACCT+TGG + chr4.2:29837194-29837213 MS.gene045478:CDS 55.0%
CGACCCATGTGAATCCCAAC+AGG - chr4.2:29835408-29835427 None:intergenic 55.0%
CTTTGCGGCAACAGGCTCAT+TGG - chr4.2:29837273-29837292 None:intergenic 55.0%
GCACTCATGACGTGGCTTAC+TGG + chr4.2:29836078-29836097 MS.gene045478:CDS 55.0%
GGGCTATCCGTGTCAATCCA+TGG + chr4.2:29835961-29835980 MS.gene045478:CDS 55.0%
GGGTGTTCTCCATCGCTTAG+TGG + chr4.2:29835939-29835958 MS.gene045478:CDS 55.0%
GTGGTCCCAAGACGGTGAAT+GGG + chr4.2:29837052-29837071 MS.gene045478:CDS 55.0%
TGACCACTCTTTGCGGCAAC+AGG - chr4.2:29837281-29837300 None:intergenic 55.0%
! AGGGATGCCGACCTTGGTTT+TGG + chr4.2:29837200-29837219 MS.gene045478:CDS 55.0%
! CGGATGAGGAGTGTAAGGCA+AGG + chr4.2:29835451-29835470 MS.gene045478:CDS 55.0%
!! TCCACCTCTGAGACAATCCC+CGG - chr4.2:29834601-29834620 None:intergenic 55.0%
AAGAACGAAGGCGGATGCCG+AGG + chr4.2:29834563-29834582 MS.gene045478:CDS 60.0%
AGAACGAAGGCGGATGCCGA+GGG + chr4.2:29834564-29834583 MS.gene045478:CDS 60.0%
CCCGGGACACTCATAACCCT+CGG - chr4.2:29834583-29834602 None:intergenic 60.0%
CCGAGGGTTATGAGTGTCCC+GGG + chr4.2:29834580-29834599 MS.gene045478:CDS 60.0%
CGAGGGTTATGAGTGTCCCG+GGG + chr4.2:29834581-29834600 MS.gene045478:CDS 60.0%
CGGATAGCCCCACTAAGCGA+TGG - chr4.2:29835951-29835970 None:intergenic 60.0%
GAGCCTGTTGCCGCAAAGAG+TGG + chr4.2:29837275-29837294 MS.gene045478:CDS 60.0%
GCCGAGGGTTATGAGTGTCC+CGG + chr4.2:29834579-29834598 MS.gene045478:CDS 60.0%
GGTGGTCCCAAGACGGTGAA+TGG + chr4.2:29837051-29837070 MS.gene045478:intron 60.0%
TGTCCCGGGGATTGTCTCAG+AGG + chr4.2:29834594-29834613 MS.gene045478:CDS 60.0%
!! CCACCTCTGAGACAATCCCC+GGG - chr4.2:29834600-29834619 None:intergenic 60.0%
AATGGGATCGGGGTCGGGGA+GGG + chr4.2:29834534-29834553 MS.gene045478:CDS 65.0%
CAGCAATGGGATCGGGGTCG+GGG + chr4.2:29834530-29834549 MS.gene045478:CDS 65.0%
CCAGCAATGGGATCGGGGTC+GGG + chr4.2:29834529-29834548 MS.gene045478:CDS 65.0%
CCCAGCAATGGGATCGGGGT+CGG + chr4.2:29834528-29834547 MS.gene045478:CDS 65.0%
CCCGGGGATTGTCTCAGAGG+TGG + chr4.2:29834597-29834616 MS.gene045478:CDS 65.0%
CCGACCCCGATCCCATTGCT+GGG - chr4.2:29834531-29834550 None:intergenic 65.0%
CAATGGGATCGGGGTCGGGG+AGG + chr4.2:29834533-29834552 MS.gene045478:CDS 70.0%
CCCGACCCCGATCCCATTGC+TGG - chr4.2:29834532-29834551 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 29834478 29838655 29834478 ID=MS.gene045478
chr4.2 mRNA 29834478 29838655 29834478 ID=MS.gene045478.t1;Parent=MS.gene045478
chr4.2 exon 29834478 29836480 29834478 ID=MS.gene045478.t1.exon1;Parent=MS.gene045478.t1
chr4.2 CDS 29834478 29836480 29834478 ID=cds.MS.gene045478.t1;Parent=MS.gene045478.t1
chr4.2 exon 29837052 29837325 29837052 ID=MS.gene045478.t1.exon2;Parent=MS.gene045478.t1
chr4.2 CDS 29837052 29837325 29837052 ID=cds.MS.gene045478.t1;Parent=MS.gene045478.t1
chr4.2 exon 29838347 29838655 29838347 ID=MS.gene045478.t1.exon3;Parent=MS.gene045478.t1
chr4.2 CDS 29838347 29838655 29838347 ID=cds.MS.gene045478.t1;Parent=MS.gene045478.t1
Gene Sequence

>MS.gene045478

ATGATGTCCAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCAGCAATGGGATCGGGGTCGGGGAGGGAGTTTAAAGAACGAAGGCGGATGCCGAGGGTTATGAGTGTCCCGGGGATTGTCTCAGAGGTGGATGATGATCAGGCAGTAAGTGTTTCTTCGGATAATCCGTCAACTATTTCTTCTGATCGAATTATCATTGTAGCAAATCAGCTACCTTTGAAAGCTAAGAAAAGAGAGGACAACAAAGGGTGGAGTTTTAGTTGGAATGAGGATTCTTTGCTATTACAGCTTAAGGATGGATTTCCAGAAGATATGGAGGTTCTGTATGTTGGATCTTTGCGCGTTGACATTGATCCCGCTGAACAAGATGATGTATCACAGTATTTGCTGGAGAAATTCAAATGTGTCCCCACTTTTCTGCCTCCTGATGTTTTGGCAAACTTTTATGATGGCTTCTGCAAAAGGCAATTATGGCCACTTTTTCATTACAAGTTACCGTTTTCAACTGATAAAAGCCACCGCTTTGATCGCCATTTGTGGGAAGCCTATGTTCTGGCAAACAAGCTGTTCTTTCAGAAGGTAGTTGAAATAATAAACCCGGAGGATGATTATATTTGGGTTCATGATTACCATTTGATGGTGCTGCCAACTTTTCTAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCATCGGAGATATATAGGACTCTTCCTGTTAGGGAGGAGATACTAAAAGCTTTACTAAATTCTGATATCATTGGATTCCATACTTTCGATTATGCTCGTCATTTTCTTTCCTGCTGCAGTCGTATGTTGGGTCTAGAGTATCAGTCAAAGAGGGGTTATCTAGGATTGGAATATTACGGGAGGACTATCAGTATTAAGATCATGCCTGTTGGGATTCACATGGGTCGGATTGAATCTGTTATGAGGATGTCGGATGAGGAGTGTAAGGCAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATTTTGCTTGGTATTGACGATATGGACATTTTTAAAGGTATAAATTTGAAGATTCTGGCTATGGAGCAGATGCTGAAACAACACCCCAAATGGCAAGGAAGAGCTGTTTTAGTCCAGATAGTTAACCCTGCTAGAGGTAAAGGGATACATGTAGATGAAATCCATTCTGAAATAGAAGAAAGTTGCAGCAGGATCAACAGAGTGTTTGGACGACCTGGTTATGAACCTATTGTGTTTATTGACAGATCGGTTCCAATTACTGAAAAAGTTGCCTATTACAGCCTTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATTGTTTGTAGACAGGGAATATCTGGTCCTGAATCAAGTTCCAATGCGAATAGCCCAAAGAAGAGCATGCTTGTAATATCAGAATTTATTGGGTGTTCTCCATCGCTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAGCAACTGCGGAGGCAATGAATGAAGCCATTTCAATGAGTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGGTATGTCAGCACTCATGACGTGGCTTACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACGGACCTTCTTAGAAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCTCTTGACCCTAACTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAAAACTCCATTAATAAGAGTCCAAGCAAAGAGGTCATATCTCTTTTGGAAAGTCTCTGTGCAGACCCCAAAAATGTTGTTTTCATTGTTAGTGGACGGGGTAGGGATAGCTTAAGTGAATGGTTTACTCCCTGTAAAAAACTTGGAATTGCTGCAGAACATGGATACTTCTTGAGGTCTGTACTTTCGCTCTGACATTTCATCTGTTTATTTTGTTTTGTATTAGTTGTTCAGAAATTACTTATGAATTATGTGAAAATAATATTTTAGGCATCTCCATACTATGAACTTGTGCTGTAAAGTTGCAAAGTGCCATTTTTCTTGTCTGAATGCAGTAAATTACAATAACTTCCTTTCATCCCTAGGTCTGAACAAGAGCTATTACGTGGGGATGAAAGTGTTTTAAAGTCCAATTGGATAGTGTATGCTTTACTGTAAATTGAAATTCATGTGTATGGTTTTGCAAATGCTGTTAGTAACTCATCTTACACTGTTGTTTAAACCAGAGTTGAGAACATCAGTTGTCTTATGGCAGTCATGCCAGGGAGAAGTTCCTGTTGAGTGATATATTGTTTGCTGATAATGTTTTTGATCACTTCCTCCATGTATGGATCTGCATTGATCTAGAAGCTAAATTTACACTTTGCTAACATAAATTCCCAAATGTTCACTTTCTTGATATATTTTGTCCTGTGTTCTCTTCTTTTTATAATTTGGCAATTTATTAACAATTTGAGCATTTTTCAGGTGGTCCCAAGACGGTGAATGGGAAACTTGTGGTAATTGCTCTGATTTTGGATGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCCAGTATTGAACGAAAGGAAAGTGCTTTGGTTTGGCAATACAGGGATGCCGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCCGCAAAGAGTGGTCAGTTTATCGTTGAAGTGAAGCCCCAGGTATATACAATTTCTCTACATGATTTGTCTACATAAAGAATTCTGCTTTTCATTTTACATTTTATTATTTTATAATATGAAAATGTCCTTTCTAAAATGCATTCTGGAGTTTGGATTTCTTATTTGTCAGAGACTACAGAAGAGCTTAGATAGCAATATTAAGGGCATGATTGGTTTCCATTTTCTGTTTTCAATTTTAATTACAAAAATGTTACCTTGTTTTCATTTTAAAAAGTTTTGTACATAATTTTTTTCACCATTTCCTATTGTTAACTTTGAAAACAGAGCAAAATGTAAGCCTGTGATAACAGAAAATGGGAACAAAAAATATGTACAGAAATCCAAAAGGTCCCTAGGGTCTGATTGGTTTCAGAAAACACTTCCTGTTAAATAGCAATTTGATTTCACTTTGTGCTTATTTACAATTTTTTTGCAGTAAATAGTGAAAATAACACAACTAGTTGTTTTCACCATTTCCTATAAAATGACTTCGAAAACCCGAAACATGGTGAAAGCAAGTTGGTATTTTTGTAATTGATACAGAAAATAAAACCTAACAATGTTATCTAAAGCTAGTAGGTCCTTAGTTGTCGGGAATTTGTTGTCCAACTTTACGTAAGATATAACAATGCGTTCTTATAATTCTATTTTTTTTCTTTCTTTCTACCATGGCCATTTAATAAGAAAATGTTCCATCTAACCATGGACCAAGAACCTGATCTATTTTATCCTTGTCTTGGATATCTGACATTGAAGTCCTGCAAATTTCTGTTCTAATTTTTTGGATTGACATGCCTCCTGTTGTTCCTTTAGACATAAATGATGCTGTTAAAGTAGTTTTTTAGAGAAGCTTTTTGGATAATATTTTTACTCAATATAGAAATTCGTATATCCAGCATAGCAGTTTGTTTTTACCATATAATTTTGGCTTTAACACTATAATTGATAATTGATATGCTATTTATTGTGCTACAACCCCTTTGGGAAAATGATGATTCATCTTATACCATTTGCATTGCAGGATGTGAGCAAAGGCTTAGTTGCGGACAAGATATTTTCGTCAATGACTGAAAGTGACAAACAGGCTGACTTTGTCCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATCTCAAGGAATATTCTTTCCTCCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAGCCAAGTAAAGCAAAGTATTATCTGGATGATACTTCTGAAGTAATAAATATGCTAGAATCTTTGGCTGAAGAATCAGATTCTTCACCATGCATAGAAGAATCTGGGGATTCCTCTTGA
Protein sequence

>MS.gene045478.t1

MMSRSYTNLLDLASGNFPAMGSGSGREFKERRRMPRVMSVPGIVSEVDDDQAVSVSSDNPSTISSDRIIIVANQLPLKAKKREDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDIDPAEQDDVSQYLLEKFKCVPTFLPPDVLANFYDGFCKRQLWPLFHYKLPFSTDKSHRFDRHLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMSDEECKARELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQIVNPARGKGIHVDEIHSEIEESCSRINRVFGRPGYEPIVFIDRSVPITEKVAYYSLAECVIVTAVRDGMNLTPYEYIVCRQGISGPESSSNANSPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSKEVISLLESLCADPKNVVFIVSGRGRDSLSEWFTPCKKLGIAAEHGYFLRWSQDGEWETCGNCSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQDVSKGLVADKIFSSMTESDKQADFVLCVGDDRSDEDMFEIVSSAISRNILSSNASVFACTVGQKPSKAKYYLDDTSEVINMLESLAEESDSSPCIEESGDSS