Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029463.t1 | XP_013470155.1 | 99.2 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.00E+00 | 1716 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029463.t1 | O23617 | 77.4 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0e+00 | 1370.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029463.t1 | A0A072VRW8 | 99.2 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.0e+00 | 1716.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035660 | MS.gene029463 | PPI |
| MS.gene029463 | MS.gene006702 | PPI |
| MS.gene018379 | MS.gene029463 | PPI |
| MS.gene038603 | MS.gene029463 | PPI |
| MS.gene012447 | MS.gene029463 | PPI |
| MS.gene83030 | MS.gene029463 | PPI |
| MS.gene029463 | MS.gene026499 | PPI |
| MS.gene009143 | MS.gene029463 | PPI |
| MS.gene95324 | MS.gene029463 | PPI |
| MS.gene015639 | MS.gene029463 | PPI |
| MS.gene045478 | MS.gene029463 | PPI |
| MS.gene71003 | MS.gene029463 | PPI |
| MS.gene57938 | MS.gene029463 | PPI |
| MS.gene040931 | MS.gene029463 | PPI |
| MS.gene029463 | MS.gene031592 | PPI |
| MS.gene95835 | MS.gene029463 | PPI |
| MS.gene62674 | MS.gene029463 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029463.t1 | MTR_1g109620 | 99.180 | 854 | 7 | 0 | 1 | 854 | 1 | 854 | 0.0 | 1766 |
| MS.gene029463.t1 | MTR_8g105740 | 72.824 | 850 | 223 | 5 | 1 | 843 | 1 | 849 | 0.0 | 1312 |
| MS.gene029463.t1 | MTR_1g032730 | 72.535 | 852 | 224 | 6 | 1 | 843 | 1 | 851 | 0.0 | 1300 |
| MS.gene029463.t1 | MTR_4g080160 | 64.947 | 853 | 288 | 3 | 1 | 844 | 1 | 851 | 0.0 | 1204 |
| MS.gene029463.t1 | MTR_8g063790 | 66.982 | 845 | 271 | 2 | 1 | 843 | 1 | 839 | 0.0 | 1182 |
| MS.gene029463.t1 | MTR_4g129270 | 60.050 | 801 | 310 | 7 | 52 | 846 | 47 | 843 | 0.0 | 1003 |
| MS.gene029463.t1 | MTR_4g129270 | 57.784 | 758 | 311 | 6 | 1 | 754 | 1 | 753 | 0.0 | 902 |
| MS.gene029463.t1 | MTR_3g078210 | 53.766 | 770 | 353 | 2 | 83 | 850 | 3 | 771 | 0.0 | 845 |
| MS.gene029463.t1 | MTR_3g467030 | 49.082 | 599 | 275 | 3 | 61 | 659 | 1 | 569 | 0.0 | 576 |
| MS.gene029463.t1 | MTR_2g073260 | 34.279 | 811 | 464 | 20 | 1 | 792 | 74 | 834 | 2.41e-144 | 451 |
| MS.gene029463.t1 | MTR_0034s0170 | 35.714 | 756 | 423 | 21 | 58 | 792 | 83 | 796 | 8.20e-140 | 438 |
| MS.gene029463.t1 | MTR_8g087910 | 38.040 | 347 | 196 | 7 | 37 | 380 | 54 | 384 | 1.06e-70 | 239 |
| MS.gene029463.t1 | MTR_8g087930 | 32.877 | 438 | 244 | 14 | 387 | 806 | 10 | 415 | 6.68e-57 | 204 |
| MS.gene029463.t1 | MTR_3g076810 | 43.243 | 185 | 85 | 3 | 8 | 192 | 6 | 170 | 1.00e-45 | 162 |
| MS.gene029463.t1 | MTR_3g467040 | 53.271 | 107 | 50 | 0 | 483 | 589 | 110 | 216 | 1.28e-32 | 126 |
| MS.gene029463.t1 | MTR_3g467040 | 41.228 | 114 | 67 | 0 | 308 | 421 | 1 | 114 | 4.28e-23 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029463.t1 | AT4G17770 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1410 |
| MS.gene029463.t1 | AT4G17770 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1410 |
| MS.gene029463.t1 | AT1G68020 | 71.114 | 862 | 224 | 6 | 1 | 843 | 1 | 856 | 0.0 | 1301 |
| MS.gene029463.t1 | AT1G68020 | 71.114 | 862 | 224 | 6 | 1 | 843 | 1 | 856 | 0.0 | 1301 |
| MS.gene029463.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene029463.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene029463.t1 | AT1G06410 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1181 |
| MS.gene029463.t1 | AT1G23870 | 63.860 | 855 | 307 | 1 | 1 | 853 | 1 | 855 | 0.0 | 1158 |
| MS.gene029463.t1 | AT1G70290 | 62.426 | 841 | 309 | 3 | 1 | 839 | 1 | 836 | 0.0 | 1120 |
| MS.gene029463.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene029463.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene029463.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene029463.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene029463.t1 | AT1G60140 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1109 |
| MS.gene029463.t1 | AT1G68020 | 71.701 | 682 | 170 | 5 | 1 | 665 | 1 | 676 | 0.0 | 1045 |
| MS.gene029463.t1 | AT2G18700 | 58.392 | 846 | 338 | 7 | 1 | 842 | 1 | 836 | 0.0 | 1043 |
| MS.gene029463.t1 | AT1G70290 | 58.621 | 841 | 303 | 4 | 1 | 839 | 1 | 798 | 0.0 | 1030 |
| MS.gene029463.t1 | AT1G60140 | 61.804 | 754 | 288 | 0 | 1 | 754 | 1 | 754 | 0.0 | 1007 |
| MS.gene029463.t1 | AT1G16980 | 34.761 | 817 | 462 | 26 | 60 | 850 | 13 | 784 | 1.28e-145 | 450 |
| MS.gene029463.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene029463.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene029463.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene029463.t1 | AT1G78580 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.63e-141 | 442 |
| MS.gene029463.t1 | AT4G27550 | 33.976 | 830 | 450 | 27 | 56 | 837 | 1 | 780 | 3.20e-137 | 427 |
| MS.gene029463.t1 | AT4G27550 | 34.135 | 832 | 455 | 28 | 56 | 837 | 1 | 789 | 1.52e-136 | 426 |
| MS.gene029463.t1 | AT1G16980 | 35.220 | 636 | 353 | 20 | 60 | 681 | 13 | 603 | 6.65e-118 | 373 |
Find 197 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGATAGCTTTCTAAAGTT+TGG | 0.197254 | 1.2:+81298508 | None:intergenic |
| CTTCTGAATTCTGACCTTAT+AGG | 0.215099 | 1.2:-81299468 | MS.gene029463:CDS |
| AGATGCTGGGGAATTGGTTT+TGG | 0.230491 | 1.2:-81298559 | MS.gene029463:CDS |
| CCACCAGCATGCTCTTCTTT+TGG | 0.238177 | 1.2:+81298812 | None:intergenic |
| AGGAATCAGCTTAAAACTTT+TGG | 0.239280 | 1.2:-81299181 | MS.gene029463:CDS |
| TGTGTCTTCCAAGTAATATT+TGG | 0.250613 | 1.2:+81297062 | None:intergenic |
| TTCTGAATTCTGACCTTATA+GGG | 0.267422 | 1.2:-81299467 | MS.gene029463:CDS |
| CTTCCTGTTGGTATTCATAT+AGG | 0.288144 | 1.2:-81299318 | MS.gene029463:CDS |
| CAAGCACCGAGCGATTCTTT+TGG | 0.298713 | 1.2:-81298455 | MS.gene029463:CDS |
| CCAAGAGTGGCAACTGTTGC+TGG | 0.299481 | 1.2:-81300140 | MS.gene029463:CDS |
| CACAATGAAAACACAATTCT+TGG | 0.302805 | 1.2:+81298342 | None:intergenic |
| GAATTTGCAGACCGAGATTT+CGG | 0.306462 | 1.2:-81297930 | MS.gene029463:CDS |
| CAGATAGCTTTCTAAAGTTT+GGG | 0.314076 | 1.2:+81298509 | None:intergenic |
| TCCTTTCCGCGGCCTCTAGC+AGG | 0.317442 | 1.2:+81299090 | None:intergenic |
| TTGCTTAATGAGGAGATAAC+TGG | 0.325875 | 1.2:+81296971 | None:intergenic |
| TACGCACGATGTTGCATATT+GGG | 0.340179 | 1.2:-81298635 | MS.gene029463:CDS |
| CCAAACCAGAGCACTCTCTT+TGG | 0.342936 | 1.2:+81297959 | None:intergenic |
| TCTTTCCTTTGTGCCTTCAA+TGG | 0.344898 | 1.2:+81300017 | None:intergenic |
| TTTGGATTATGATAGTACTA+TGG | 0.345249 | 1.2:-81298437 | MS.gene029463:CDS |
| AGCTATGGATTCCGCCTTAA+TGG | 0.346795 | 1.2:-81298710 | MS.gene029463:CDS |
| GATCATCCTTTCTTGAGAAA+TGG | 0.352240 | 1.2:+81300058 | None:intergenic |
| GGTTTAACTTCCACAATGTA+TGG | 0.356426 | 1.2:+81297831 | None:intergenic |
| CATCATTAAGCGGCGCAATT+CGG | 0.361445 | 1.2:-81298765 | MS.gene029463:CDS |
| GCAACATCATCTTGCTCAAT+TGG | 0.362213 | 1.2:+81299876 | None:intergenic |
| TCTGTATATAACTGCATAAC+TGG | 0.363196 | 1.2:+81298008 | None:intergenic |
| AGGAGGAGATGCTGGGGAAT+TGG | 0.363586 | 1.2:-81298565 | MS.gene029463:CDS |
| AAGCTTCCCATTCTTCAGTA+TGG | 0.363738 | 1.2:+81298072 | None:intergenic |
| AGATCAGATGAGGACATGTT+TGG | 0.364020 | 1.2:-81297165 | MS.gene029463:CDS |
| TTCAGACTCCGGGACCATTA+AGG | 0.365240 | 1.2:+81298696 | None:intergenic |
| CTTCCGCTGTCGCCTGATCT+TGG | 0.368992 | 1.2:-81299738 | MS.gene029463:CDS |
| CTAAGAAGTTCATCTCTAAC+AGG | 0.372241 | 1.2:+81299495 | None:intergenic |
| CCAATGCATAGAACAAAATC+TGG | 0.378049 | 1.2:+81297195 | None:intergenic |
| GTTGTATCGATCAAGATTAC+AGG | 0.378659 | 1.2:+81298991 | None:intergenic |
| GGTTCATGACTACCACTTGA+TGG | 0.384948 | 1.2:-81299613 | MS.gene029463:CDS |
| ATCATCTGAGGAGGAGATGC+TGG | 0.385858 | 1.2:-81298573 | MS.gene029463:CDS |
| GTCGATTTGATCGATCTCTT+TGG | 0.389308 | 1.2:-81299713 | MS.gene029463:CDS |
| TTTGTTGCAGGGTGTGAGTA+AGG | 0.391370 | 1.2:-81297268 | MS.gene029463:intron |
| CTTTCGGTCGTGAGAAGAAA+AGG | 0.392381 | 1.2:-81300166 | MS.gene029463:CDS |
| GTTTCTGTAAACAACATCTA+TGG | 0.394301 | 1.2:-81299779 | MS.gene029463:CDS |
| ATCTGTTTCCAGTCAAAATC+AGG | 0.395840 | 1.2:+81298038 | None:intergenic |
| ATCATTAAGCGGCGCAATTC+GGG | 0.401316 | 1.2:-81298764 | MS.gene029463:CDS |
| GCACAAAGGAAAGAGGAAAA+TGG | 0.406553 | 1.2:-81300008 | MS.gene029463:CDS |
| ACATTGTTTCAGCTTATAAG+AGG | 0.408474 | 1.2:-81298480 | MS.gene029463:CDS |
| AAAAGGATAAACGACACATT+TGG | 0.409911 | 1.2:-81299030 | MS.gene029463:CDS |
| TAAGGAACTTCTTGATCATC+TGG | 0.414096 | 1.2:-81297895 | MS.gene029463:CDS |
| TGCGTCATGAGAAGCATTAT+AGG | 0.414289 | 1.2:-81298666 | MS.gene029463:CDS |
| GATCAGATGAGGACATGTTT+GGG | 0.414515 | 1.2:-81297164 | MS.gene029463:CDS |
| CGAAAGTATGAAACCCTATA+AGG | 0.416886 | 1.2:+81299454 | None:intergenic |
| GTACGCACGATGTTGCATAT+TGG | 0.417861 | 1.2:-81298636 | MS.gene029463:CDS |
| CCAGCAACAGTTGCCACTCT+TGG | 0.421922 | 1.2:+81300140 | None:intergenic |
| TCCCAACATTCTACTGCAAC+AGG | 0.422981 | 1.2:+81299410 | None:intergenic |
| TCTGATAACAATGCAACAAA+AGG | 0.423959 | 1.2:-81297226 | MS.gene029463:CDS |
| TCCTGTTGCAGTAGAATGTT+GGG | 0.425459 | 1.2:-81299411 | MS.gene029463:CDS |
| AATGAGGGGAAAGGTTGTTC+TGG | 0.426046 | 1.2:-81299127 | MS.gene029463:CDS |
| ATCAGAACCAACACTGTTGT+TGG | 0.428130 | 1.2:+81300091 | None:intergenic |
| CCAAAGAGAGTGCTCTGGTT+TGG | 0.428765 | 1.2:-81297959 | MS.gene029463:CDS |
| TCATGCGGCTCGCCGTCTTT+CGG | 0.430507 | 1.2:-81300182 | MS.gene029463:CDS |
| AAGTAATATTTGGCTTTGCT+TGG | 0.430940 | 1.2:+81297072 | None:intergenic |
| CGGACGAAGGAAAAGGACTA+TGG | 0.431241 | 1.2:+81299535 | None:intergenic |
| GATGTTGAAACAATCTATAT+TGG | 0.433844 | 1.2:-81299921 | MS.gene029463:CDS |
| GCGTAGCTTCTTGCAGGATC+TGG | 0.434843 | 1.2:-81298611 | MS.gene029463:CDS |
| AGGATTTCGAGTAATAGCTT+TGG | 0.436633 | 1.2:-81298533 | MS.gene029463:CDS |
| ACCCAAACAAAATCCTCATC+AGG | 0.437641 | 1.2:+81299633 | None:intergenic |
| TTGGGCGCGTAGCTTCTTGC+AGG | 0.441346 | 1.2:-81298617 | MS.gene029463:CDS |
| CAAGAAAGGATGATCATTGT+TGG | 0.442753 | 1.2:-81300050 | MS.gene029463:CDS |
| TCAAATCGACCACCAAGATC+AGG | 0.444062 | 1.2:+81299726 | None:intergenic |
| AAGGTCAAACTGTGATGCTT+GGG | 0.444131 | 1.2:-81299227 | MS.gene029463:CDS |
| CGAATTGCGCCGCTTAATGA+TGG | 0.445926 | 1.2:+81298766 | None:intergenic |
| CAAAAGAATCGCTCGGTGCT+TGG | 0.449492 | 1.2:+81298456 | None:intergenic |
| TCACAGTTTGACCTTTGAAC+TGG | 0.450018 | 1.2:+81299235 | None:intergenic |
| AACGACACATTTGGAAGGCC+TGG | 0.452363 | 1.2:-81299021 | MS.gene029463:CDS |
| GGAAAGAGGAAAATGGTAAG+TGG | 0.457394 | 1.2:-81300001 | MS.gene029463:CDS |
| TGGTAACCAGCTTCCATTGA+AGG | 0.461364 | 1.2:-81300030 | MS.gene029463:CDS |
| TTACAGCTGAAAGATGGTCT+TGG | 0.463158 | 1.2:-81299948 | MS.gene029463:CDS |
| AAGACCTATGTAGCCTCGCT+TGG | 0.466700 | 1.2:+81299374 | None:intergenic |
| AGCAGTTTGTTCAGAAGCAT+TGG | 0.467175 | 1.2:+81297008 | None:intergenic |
| AGATTTAACAGGGCAAGGCT+TGG | 0.467489 | 1.2:-81299567 | MS.gene029463:CDS |
| GACAAGCCATACTGAAGAAT+GGG | 0.468184 | 1.2:-81298078 | MS.gene029463:CDS |
| CAAGGAAACACGTCCGCAAT+GGG | 0.469994 | 1.2:+81297111 | None:intergenic |
| CTACAAATGATATACTCATA+TGG | 0.471654 | 1.2:+81298883 | None:intergenic |
| CTGGTGGTGTCTGAATTCAT+TGG | 0.473518 | 1.2:-81298796 | MS.gene029463:CDS |
| ATTTGATCGATCTCTTTGGC+AGG | 0.477042 | 1.2:-81299709 | MS.gene029463:CDS |
| AAAGGTCAAACTGTGATGCT+TGG | 0.478423 | 1.2:-81299228 | MS.gene029463:CDS |
| AAACTTATGCAACCGTGAAA+AGG | 0.479354 | 1.2:-81299047 | MS.gene029463:CDS |
| CATCCTCCATTTCTCAAGAA+AGG | 0.479386 | 1.2:-81300064 | MS.gene029463:CDS |
| CAATCCAAGCGAGGCTACAT+AGG | 0.479480 | 1.2:-81299378 | MS.gene029463:CDS |
| TTTGTGCCTTCAATGGAAGC+TGG | 0.479814 | 1.2:+81300024 | None:intergenic |
| TTAGAAAAGCTTGCTTAATG+AGG | 0.481570 | 1.2:+81296961 | None:intergenic |
| TACATAGGTCTTGAGTACTA+TGG | 0.482799 | 1.2:-81299363 | MS.gene029463:CDS |
| CTCCTGTTGCAGTAGAATGT+TGG | 0.483716 | 1.2:-81299412 | MS.gene029463:CDS |
| TATATCTCGGACGAAGGAAA+AGG | 0.486903 | 1.2:+81299528 | None:intergenic |
| CGATACAACACTCCAGAGTT+GGG | 0.487205 | 1.2:-81298977 | MS.gene029463:CDS |
| GAGTGAGCAAAATGGCTTCA+AGG | 0.488129 | 1.2:-81300232 | None:intergenic |
| AAGCGATTCTCTCCCAACTC+TGG | 0.499258 | 1.2:+81298965 | None:intergenic |
| TGATGCTGTTGCTGAAGCTA+TGG | 0.500313 | 1.2:-81298725 | MS.gene029463:CDS |
| ATGGTAAGTGGGAATTCACT+TGG | 0.502564 | 1.2:-81299989 | MS.gene029463:CDS |
| AAGCAAAGCCAAATATTACT+TGG | 0.502945 | 1.2:-81297070 | MS.gene029463:CDS |
| CTTGTTACAGCAGTGAGAGA+TGG | 0.504181 | 1.2:-81298919 | MS.gene029463:CDS |
| GACGTGTTTCCTTGCACCGT+TGG | 0.505796 | 1.2:-81297102 | MS.gene029463:CDS |
| TGGCCTATATGAATACCAAC+AGG | 0.508722 | 1.2:+81299315 | None:intergenic |
| CATCTCTAACAGGAAGGGTT+CGG | 0.508766 | 1.2:+81299505 | None:intergenic |
| AAGATTACAGGTGTGTATCC+AGG | 0.509121 | 1.2:+81299003 | None:intergenic |
| TCGATACAACACTCCAGAGT+TGG | 0.509920 | 1.2:-81298978 | MS.gene029463:CDS |
| GGACAAGCCATACTGAAGAA+TGG | 0.510330 | 1.2:-81298079 | MS.gene029463:CDS |
| AGCTCAGGTGGAAGGAAAGT+TGG | 0.512723 | 1.2:+81299822 | None:intergenic |
| GAAAGAGATTTAACAGGGCA+AGG | 0.513388 | 1.2:-81299572 | MS.gene029463:CDS |
| CTGATAACAATGCAACAAAA+GGG | 0.514427 | 1.2:-81297225 | MS.gene029463:CDS |
| GTGGGAATTCACTTGGGATG+AGG | 0.515265 | 1.2:-81299982 | MS.gene029463:CDS |
| ATGGAAACAGCTTCAGCACT+AGG | 0.515512 | 1.2:+81298388 | None:intergenic |
| TTGTTGCAGGGTGTGAGTAA+GGG | 0.516408 | 1.2:-81297267 | MS.gene029463:intron |
| TTCTTCTCACGACCGAAAGA+CGG | 0.519257 | 1.2:+81300170 | None:intergenic |
| TTCATACTTTCGACTATGCT+AGG | 0.522500 | 1.2:-81299443 | MS.gene029463:CDS |
| CTTCTTGCAGGATCTGGAAA+GGG | 0.524177 | 1.2:-81298605 | MS.gene029463:CDS |
| CTTGACATGAACCGAAATCT+CGG | 0.524650 | 1.2:+81297919 | None:intergenic |
| GATAGTACTATGGTGCAGCC+TGG | 0.524793 | 1.2:-81298427 | MS.gene029463:CDS |
| TCATCTGAGGAGGAGATGCT+GGG | 0.527479 | 1.2:-81298572 | MS.gene029463:CDS |
| CATTGTGGAAGTTAAACCTC+AGG | 0.529575 | 1.2:-81297826 | MS.gene029463:intron |
| AGCATTAAGATTCTTCCTGT+TGG | 0.529787 | 1.2:-81299330 | MS.gene029463:CDS |
| TGAAGTAAGATCTAACAAGT+TGG | 0.532544 | 1.2:+81300202 | None:intergenic |
| GAATTGCGCCGCTTAATGAT+GGG | 0.533355 | 1.2:+81298767 | None:intergenic |
| GAGCCTGTTTCAGTTAAAAG+TGG | 0.534096 | 1.2:-81297855 | MS.gene029463:CDS |
| GCAAACCCTGCTAGAGGCCG+CGG | 0.535783 | 1.2:-81299096 | MS.gene029463:CDS |
| GCAAGGAAACACGTCCGCAA+TGG | 0.535831 | 1.2:+81297110 | None:intergenic |
| CCTTTCCGCGGCCTCTAGCA+GGG | 0.538093 | 1.2:+81299091 | None:intergenic |
| CCGCTGTCGCCTGATCTTGG+TGG | 0.540431 | 1.2:-81299735 | MS.gene029463:CDS |
| GGTGTTGCACTAATTGATCC+AGG | 0.542444 | 1.2:+81298409 | None:intergenic |
| TTTACAACATGCTGAAATGA+GGG | 0.544384 | 1.2:-81299142 | MS.gene029463:CDS |
| GATTCATGACTGACTCAAGC+TGG | 0.544391 | 1.2:+81299295 | None:intergenic |
| GATGACATGGATATCTTCAA+AGG | 0.545640 | 1.2:-81299201 | MS.gene029463:CDS |
| GGATTCCGCCTTAATGGTCC+CGG | 0.546381 | 1.2:-81298704 | MS.gene029463:CDS |
| CTTTCTTGAGAAATGGAGGA+TGG | 0.547660 | 1.2:+81300065 | None:intergenic |
| GAAAGAGGAAAATGGTAAGT+GGG | 0.548871 | 1.2:-81300000 | MS.gene029463:CDS |
| TAGAATTTAGTGAAAAGCTC+AGG | 0.548984 | 1.2:+81299807 | None:intergenic |
| AGAGAAACACTCTCACTGAA+TGG | 0.549371 | 1.2:-81298309 | MS.gene029463:CDS |
| TTTCGGTTCATGTCAAGCTA+AGG | 0.551647 | 1.2:-81297913 | MS.gene029463:CDS |
| CTTGGACTTGCTGCAGAACA+CGG | 0.553602 | 1.2:-81298268 | MS.gene029463:CDS |
| CATCCTTTCTTGAGAAATGG+AGG | 0.564155 | 1.2:+81300061 | None:intergenic |
| GTTTAACTTCCACAATGTAT+GGG | 0.566536 | 1.2:+81297832 | None:intergenic |
| ACTGCACAAGCTGTTCAAGA+TGG | 0.567111 | 1.2:+81298369 | None:intergenic |
| TAGTGAAAAGCTCAGGTGGA+AGG | 0.568307 | 1.2:+81299814 | None:intergenic |
| CATAATCCAAAAGAATCGCT+CGG | 0.569386 | 1.2:+81298449 | None:intergenic |
| CCCTGCTAGAGGCCGCGGAA+AGG | 0.571655 | 1.2:-81299091 | MS.gene029463:CDS |
| GCTTCTTGCAGGATCTGGAA+AGG | 0.572169 | 1.2:-81298606 | MS.gene029463:CDS |
| ATTGAAGGCACAAAGGAAAG+AGG | 0.575033 | 1.2:-81300015 | MS.gene029463:CDS |
| GAAGTTCATCTCTAACAGGA+AGG | 0.577715 | 1.2:+81299499 | None:intergenic |
| TTGTTAGATCTTACTTCATG+CGG | 0.579234 | 1.2:-81300197 | MS.gene029463:CDS |
| AATATTTGCTGATAAAGTGA+TGG | 0.579350 | 1.2:-81299667 | MS.gene029463:CDS |
| GGCTGCTCCCCATCATTAAG+CGG | 0.581670 | 1.2:-81298775 | MS.gene029463:CDS |
| TGCTTAATGAGGAGATAACT+GGG | 0.586765 | 1.2:+81296972 | None:intergenic |
| TTGTTACAGCAGTGAGAGAT+GGG | 0.586812 | 1.2:-81298918 | MS.gene029463:CDS |
| GATGCTTGGGGTGGATGACA+TGG | 0.591172 | 1.2:-81299214 | MS.gene029463:CDS |
| GCGCAATTCGGGTGAATCCG+TGG | 0.591517 | 1.2:-81298753 | MS.gene029463:CDS |
| AGAGTCCAAAGAGAGTGCTC+TGG | 0.593330 | 1.2:-81297964 | MS.gene029463:CDS |
| GAAGAAAAGGCTTCCAAGAG+TGG | 0.594619 | 1.2:-81300153 | MS.gene029463:CDS |
| AGGAAGGGTTCGGTATATCT+CGG | 0.595173 | 1.2:+81299515 | None:intergenic |
| TCTTTCTGAGACAGAAAGCA+AGG | 0.595405 | 1.2:-81299274 | MS.gene029463:CDS |
| TAAAAGTGGCCCATACATTG+TGG | 0.597276 | 1.2:-81297841 | MS.gene029463:CDS |
| AAGTTCATCTCTAACAGGAA+GGG | 0.599310 | 1.2:+81299500 | None:intergenic |
| TTGGGGTAATAACAAGTGCA+AGG | 0.603403 | 1.2:-81297146 | MS.gene029463:CDS |
| TATCCAAAAGAAGAGCATGC+TGG | 0.604070 | 1.2:-81298815 | MS.gene029463:CDS |
| GAGTTAAGAAACCAGTTCAA+AGG | 0.606608 | 1.2:-81299246 | MS.gene029463:CDS |
| CCACCAAGATCAGGCGACAG+CGG | 0.612409 | 1.2:+81299735 | None:intergenic |
| GATGAAACCAACAACAGTGT+TGG | 0.613941 | 1.2:-81300098 | MS.gene029463:CDS |
| GCAACAGCATCAATATTCCA+CGG | 0.614265 | 1.2:+81298736 | None:intergenic |
| TGGTAAGTGGGAATTCACTT+GGG | 0.618013 | 1.2:-81299988 | MS.gene029463:CDS |
| GTTCGGTATATCTCGGACGA+AGG | 0.622286 | 1.2:+81299522 | None:intergenic |
| ACATGCTGAAATGAGGGGAA+AGG | 0.622463 | 1.2:-81299136 | MS.gene029463:CDS |
| AATTTAGTGAAAAGCTCAGG+TGG | 0.623435 | 1.2:+81299810 | None:intergenic |
| GGAAGTTATCAACCCTGATG+AGG | 0.625660 | 1.2:-81299646 | MS.gene029463:CDS |
| AAACTTTAGAAAGCTATCTG+TGG | 0.628781 | 1.2:-81298506 | MS.gene029463:CDS |
| AGCTTCCATTGAAGGCACAA+AGG | 0.630490 | 1.2:-81300022 | MS.gene029463:CDS |
| TGGGGTAATAACAAGTGCAA+GGG | 0.633008 | 1.2:-81297145 | MS.gene029463:CDS |
| TTACAACATGCTGAAATGAG+GGG | 0.634606 | 1.2:-81299141 | MS.gene029463:CDS |
| GGAAGCATGTAGTGAAACAA+AGG | 0.636066 | 1.2:+81299756 | None:intergenic |
| CTTCTTGCACATCCTTTCCG+CGG | 0.637125 | 1.2:+81299079 | None:intergenic |
| CCCAAACAAAATCCTCATCA+GGG | 0.640182 | 1.2:+81299634 | None:intergenic |
| TGGTGATGACAGATCAGATG+AGG | 0.641223 | 1.2:-81297175 | MS.gene029463:CDS |
| GAGTATATCATTTGTAGACA+AGG | 0.642548 | 1.2:-81298877 | MS.gene029463:CDS |
| GGCATCTCTATCGCCCATTG+CGG | 0.645098 | 1.2:-81297124 | MS.gene029463:CDS |
| CATCTGAGGAGGAGATGCTG+GGG | 0.645178 | 1.2:-81298571 | MS.gene029463:CDS |
| TTTGAGAAAGAGATTTAACA+GGG | 0.647753 | 1.2:-81299577 | MS.gene029463:CDS |
| CAAATCGCAAACCCTGCTAG+AGG | 0.649493 | 1.2:-81299102 | MS.gene029463:CDS |
| AATCGCTTACTATGCAATTG+CGG | 0.650771 | 1.2:-81298950 | MS.gene029463:CDS |
| ACATTCTACTGCAACAGGAG+AGG | 0.651128 | 1.2:+81299415 | None:intergenic |
| AATTGCGCCGCTTAATGATG+GGG | 0.652274 | 1.2:+81298768 | None:intergenic |
| CTTGTAGAGATCATCTGAGG+AGG | 0.654064 | 1.2:-81298582 | MS.gene029463:CDS |
| GGATAAACGACACATTTGGA+AGG | 0.660498 | 1.2:-81299026 | MS.gene029463:CDS |
| TTATATACAGAAACTACTGA+TGG | 0.662521 | 1.2:-81297996 | MS.gene029463:CDS |
| CCAAAAGAAGAGCATGCTGG+TGG | 0.662803 | 1.2:-81298812 | MS.gene029463:CDS |
| AGACTCCGGGACCATTAAGG+CGG | 0.664593 | 1.2:+81298699 | None:intergenic |
| ATCAGATGAGGACATGTTTG+GGG | 0.667558 | 1.2:-81297163 | MS.gene029463:CDS |
| TCAAACTGTGATGCTTGGGG+TGG | 0.668780 | 1.2:-81299223 | MS.gene029463:CDS |
| ACGAAGGAAAAGGACTATGG+AGG | 0.674332 | 1.2:+81299538 | None:intergenic |
| GGGCTTGTAGAGATCATCTG+AGG | 0.683476 | 1.2:-81298585 | MS.gene029463:CDS |
| ATGTTGGAAGAACCATCAAG+TGG | 0.693809 | 1.2:+81299601 | None:intergenic |
| AGGTCAAACTGTGATGCTTG+GGG | 0.701625 | 1.2:-81299226 | MS.gene029463:CDS |
| ATTGCTTATCAATCCAAGCG+AGG | 0.704535 | 1.2:-81299387 | MS.gene029463:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATGATTAATAATACTA+TGG | - | chr1.2:81299797-81299816 | MS.gene029463:CDS | 15.0% |
| !! | GATCTTTAGTTAAAATAAAA+AGG | - | chr1.2:81299496-81299515 | MS.gene029463:CDS | 15.0% |
| !!! | AAATAAATTGTTTTCTTTGA+TGG | - | chr1.2:81299047-81299066 | MS.gene029463:CDS | 15.0% |
| !! | ATTAAGAAACAGACATTTAT+CGG | + | chr1.2:81299562-81299581 | None:intergenic | 20.0% |
| !! | TTGAAGTTAATTCTAATCTT+TGG | - | chr1.2:81299824-81299843 | MS.gene029463:CDS | 20.0% |
| !! | TTTGTATACTACTTATTGTT+GGG | - | chr1.2:81299466-81299485 | MS.gene029463:CDS | 20.0% |
| !!! | AAATTTATCCTTTTTTTTCC+AGG | - | chr1.2:81299096-81299115 | MS.gene029463:CDS | 20.0% |
| ! | AATCTCTTTCTCAAAAATGT+TGG | + | chr1.2:81297614-81297633 | None:intergenic | 25.0% |
| ! | AGTTCATGATCTTAGAAATA+AGG | + | chr1.2:81299873-81299892 | None:intergenic | 25.0% |
| ! | ATAAAAAGGATACTTGAATC+TGG | - | chr1.2:81299510-81299529 | MS.gene029463:CDS | 25.0% |
| ! | CTACAAATGATATACTCATA+TGG | + | chr1.2:81298316-81298335 | None:intergenic | 25.0% |
| ! | GATGTTGAAACAATCTATAT+TGG | - | chr1.2:81297275-81297294 | MS.gene029463:intron | 25.0% |
| ! | GTTTGTATACTACTTATTGT+TGG | - | chr1.2:81299465-81299484 | MS.gene029463:CDS | 25.0% |
| ! | TTATATACAGAAACTACTGA+TGG | - | chr1.2:81299200-81299219 | MS.gene029463:CDS | 25.0% |
| ! | TTTAAAAGAGTGAGTTCATT+TGG | + | chr1.2:81299000-81299019 | None:intergenic | 25.0% |
| ! | TTTGAGAAAGAGATTTAACA+GGG | - | chr1.2:81297619-81297638 | MS.gene029463:intron | 25.0% |
| ! | TTTGGATTATGATAGTACTA+TGG | - | chr1.2:81298759-81298778 | MS.gene029463:CDS | 25.0% |
| !! | AATATTTGCTGATAAAGTGA+TGG | - | chr1.2:81297529-81297548 | MS.gene029463:intron | 25.0% |
| !! | CTTTTCACTAAATTCTATCA+TGG | - | chr1.2:81297395-81297414 | MS.gene029463:intron | 25.0% |
| !!! | ACTTTTTTATTACTAACCTG+AGG | + | chr1.2:81299389-81299408 | None:intergenic | 25.0% |
| !!! | TTTTGAGAAAGAGATTTAAC+AGG | - | chr1.2:81297618-81297637 | MS.gene029463:intron | 25.0% |
| AAAAGGATAAACGACACATT+TGG | - | chr1.2:81298166-81298185 | MS.gene029463:intron | 30.0% | |
| AAGCAAAGCCAAATATTACT+TGG | - | chr1.2:81300126-81300145 | MS.gene029463:CDS | 30.0% | |
| ACATTGTTTCAGCTTATAAG+AGG | - | chr1.2:81298716-81298735 | MS.gene029463:CDS | 30.0% | |
| CACAATGAAAACACAATTCT+TGG | + | chr1.2:81298857-81298876 | None:intergenic | 30.0% | |
| CTGATAACAATGCAACAAAA+GGG | - | chr1.2:81299971-81299990 | MS.gene029463:CDS | 30.0% | |
| GAGTATATCATTTGTAGACA+AGG | - | chr1.2:81298319-81298338 | MS.gene029463:CDS | 30.0% | |
| GTTTCTGTAAACAACATCTA+TGG | - | chr1.2:81297417-81297436 | MS.gene029463:intron | 30.0% | |
| TAGAATTTAGTGAAAAGCTC+AGG | + | chr1.2:81297392-81297411 | None:intergenic | 30.0% | |
| TCATGATCTTAGAAATAAGG+AGG | + | chr1.2:81299870-81299889 | None:intergenic | 30.0% | |
| TCGTAGATCAAAGAAAATAG+CGG | + | chr1.2:81299747-81299766 | None:intergenic | 30.0% | |
| TCTGATAACAATGCAACAAA+AGG | - | chr1.2:81299970-81299989 | MS.gene029463:CDS | 30.0% | |
| TCTGTATATAACTGCATAAC+TGG | + | chr1.2:81299191-81299210 | None:intergenic | 30.0% | |
| TGAAGTAAGATCTAACAAGT+TGG | + | chr1.2:81296997-81297016 | None:intergenic | 30.0% | |
| TGTGTCTTCCAAGTAATATT+TGG | + | chr1.2:81300137-81300156 | None:intergenic | 30.0% | |
| TTATGCATGAAAGAATGTTG+TGG | - | chr1.2:81299021-81299040 | MS.gene029463:CDS | 30.0% | |
| TTCTGAATTCTGACCTTATA+GGG | - | chr1.2:81297729-81297748 | MS.gene029463:intron | 30.0% | |
| TTGTTAGATCTTACTTCATG+CGG | - | chr1.2:81296999-81297018 | MS.gene029463:CDS | 30.0% | |
| TTTACAACATGCTGAAATGA+GGG | - | chr1.2:81298054-81298073 | MS.gene029463:CDS | 30.0% | |
| ! | AAACTTTAGAAAGCTATCTG+TGG | - | chr1.2:81298690-81298709 | MS.gene029463:CDS | 30.0% |
| ! | AATTGTGTTTTCATTGTGAG+TGG | - | chr1.2:81298859-81298878 | MS.gene029463:CDS | 30.0% |
| ! | AGGAATCAGCTTAAAACTTT+TGG | - | chr1.2:81298015-81298034 | MS.gene029463:CDS | 30.0% |
| ! | GAGAAGATAGATGAGATTTT+AGG | - | chr1.2:81298346-81298365 | MS.gene029463:CDS | 30.0% |
| ! | GTTTAACTTCCACAATGTAT+GGG | + | chr1.2:81299367-81299386 | None:intergenic | 30.0% |
| ! | TGGTCATGAATTCTTTTGAA+GGG | - | chr1.2:81299844-81299863 | MS.gene029463:CDS | 30.0% |
| ! | TTGGTCATGAATTCTTTTGA+AGG | - | chr1.2:81299843-81299862 | MS.gene029463:CDS | 30.0% |
| ! | TTTTACAACATGCTGAAATG+AGG | - | chr1.2:81298053-81298072 | MS.gene029463:CDS | 30.0% |
| ! | TTTTCTTCTTGTGAAAAGCT+TGG | - | chr1.2:81298910-81298929 | MS.gene029463:CDS | 30.0% |
| !! | AAGTAATATTTGGCTTTGCT+TGG | + | chr1.2:81300127-81300146 | None:intergenic | 30.0% |
| !! | ACAGATAGCTTTCTAAAGTT+TGG | + | chr1.2:81298691-81298710 | None:intergenic | 30.0% |
| !! | CAGATAGCTTTCTAAAGTTT+GGG | + | chr1.2:81298690-81298709 | None:intergenic | 30.0% |
| AAACTTATGCAACCGTGAAA+AGG | - | chr1.2:81298149-81298168 | MS.gene029463:intron | 35.0% | |
| AAGTTCATCTCTAACAGGAA+GGG | + | chr1.2:81297699-81297718 | None:intergenic | 35.0% | |
| AATCGCTTACTATGCAATTG+CGG | - | chr1.2:81298246-81298265 | MS.gene029463:intron | 35.0% | |
| AATTTAGTGAAAAGCTCAGG+TGG | + | chr1.2:81297389-81297408 | None:intergenic | 35.0% | |
| AGCATTAAGATTCTTCCTGT+TGG | - | chr1.2:81297866-81297885 | MS.gene029463:CDS | 35.0% | |
| ATCTGTTTCCAGTCAAAATC+AGG | + | chr1.2:81299161-81299180 | None:intergenic | 35.0% | |
| CAAGAAAGGATGATCATTGT+TGG | - | chr1.2:81297146-81297165 | MS.gene029463:CDS | 35.0% | |
| CATAATCCAAAAGAATCGCT+CGG | + | chr1.2:81298750-81298769 | None:intergenic | 35.0% | |
| CCAATGCATAGAACAAAATC+TGG | + | chr1.2:81300004-81300023 | None:intergenic | 35.0% | |
| CTAAGAAGTTCATCTCTAAC+AGG | + | chr1.2:81297704-81297723 | None:intergenic | 35.0% | |
| CTTCCTGTTGGTATTCATAT+AGG | - | chr1.2:81297878-81297897 | MS.gene029463:CDS | 35.0% | |
| CTTCTGAATTCTGACCTTAT+AGG | - | chr1.2:81297728-81297747 | MS.gene029463:intron | 35.0% | |
| GAAAGAGGAAAATGGTAAGT+GGG | - | chr1.2:81297196-81297215 | MS.gene029463:CDS | 35.0% | |
| GAGTGAGTTCATTTGGTATA+AGG | + | chr1.2:81298993-81299012 | None:intergenic | 35.0% | |
| GAGTTAAGAAACCAGTTCAA+AGG | - | chr1.2:81297950-81297969 | MS.gene029463:CDS | 35.0% | |
| GATCATCCTTTCTTGAGAAA+TGG | + | chr1.2:81297141-81297160 | None:intergenic | 35.0% | |
| GATGACATGGATATCTTCAA+AGG | - | chr1.2:81297995-81298014 | MS.gene029463:CDS | 35.0% | |
| TAAGGAACTTCTTGATCATC+TGG | - | chr1.2:81299301-81299320 | MS.gene029463:CDS | 35.0% | |
| TACATAGGTCTTGAGTACTA+TGG | - | chr1.2:81297833-81297852 | MS.gene029463:CDS | 35.0% | |
| TTACAACATGCTGAAATGAG+GGG | - | chr1.2:81298055-81298074 | MS.gene029463:CDS | 35.0% | |
| TTCATACTTTCGACTATGCT+AGG | - | chr1.2:81297753-81297772 | MS.gene029463:intron | 35.0% | |
| TTCTTTGATGGAGATTGCTT+AGG | - | chr1.2:81299059-81299078 | MS.gene029463:CDS | 35.0% | |
| ! | AAGACACAAGTGAGATTTTG+AGG | - | chr1.2:81300149-81300168 | MS.gene029463:CDS | 35.0% |
| ! | AGGATTTCGAGTAATAGCTT+TGG | - | chr1.2:81298663-81298682 | MS.gene029463:CDS | 35.0% |
| ! | CACTTGACATTTTTGTTGCA+GGG | - | chr1.2:81299917-81299936 | MS.gene029463:CDS | 35.0% |
| ! | CAGCTTAAAACTTTTGGCAA+TGG | - | chr1.2:81298021-81298040 | MS.gene029463:CDS | 35.0% |
| ! | CCAGATTTTGTTCTATGCAT+TGG | - | chr1.2:81300001-81300020 | MS.gene029463:CDS | 35.0% |
| ! | CGAAAGTATGAAACCCTATA+AGG | + | chr1.2:81297745-81297764 | None:intergenic | 35.0% |
| ! | CTTCTTTTACAGCTGAAAGA+TGG | - | chr1.2:81297242-81297261 | MS.gene029463:CDS | 35.0% |
| ! | GGTTTAACTTCCACAATGTA+TGG | + | chr1.2:81299368-81299387 | None:intergenic | 35.0% |
| ! | GTTGTATCGATCAAGATTAC+AGG | + | chr1.2:81298208-81298227 | None:intergenic | 35.0% |
| ! | TGTTTTCATTGTGAGTGGAA+AGG | - | chr1.2:81298864-81298883 | MS.gene029463:CDS | 35.0% |
| !! | TTTGCTTGGTTTTTGACCAA+CGG | + | chr1.2:81300113-81300132 | None:intergenic | 35.0% |
| !!! | TGTGTCGTTTATCCTTTTCA+CGG | + | chr1.2:81298164-81298183 | None:intergenic | 35.0% |
| AAAGGTCAAACTGTGATGCT+TGG | - | chr1.2:81297968-81297987 | MS.gene029463:CDS | 40.0% | |
| AAGATTACAGGTGTGTATCC+AGG | + | chr1.2:81298196-81298215 | None:intergenic | 40.0% | |
| AAGCTTCCCATTCTTCAGTA+TGG | + | chr1.2:81299127-81299146 | None:intergenic | 40.0% | |
| AAGGTCAAACTGTGATGCTT+GGG | - | chr1.2:81297969-81297988 | MS.gene029463:CDS | 40.0% | |
| ACCCAAACAAAATCCTCATC+AGG | + | chr1.2:81297566-81297585 | None:intergenic | 40.0% | |
| AGAGAAACACTCTCACTGAA+TGG | - | chr1.2:81298887-81298906 | MS.gene029463:CDS | 40.0% | |
| AGATCAGATGAGGACATGTT+TGG | - | chr1.2:81300031-81300050 | MS.gene029463:CDS | 40.0% | |
| ATCAGAACCAACACTGTTGT+TGG | + | chr1.2:81297108-81297127 | None:intergenic | 40.0% | |
| ATCAGATGAGGACATGTTTG+GGG | - | chr1.2:81300033-81300052 | MS.gene029463:CDS | 40.0% | |
| ATGGTAAGTGGGAATTCACT+TGG | - | chr1.2:81297207-81297226 | MS.gene029463:CDS | 40.0% | |
| ATGTTGGAAGAACCATCAAG+TGG | + | chr1.2:81297598-81297617 | None:intergenic | 40.0% | |
| ATTGCTTATCAATCCAAGCG+AGG | - | chr1.2:81297809-81297828 | MS.gene029463:intron | 40.0% | |
| ATTTGATCGATCTCTTTGGC+AGG | - | chr1.2:81297487-81297506 | MS.gene029463:intron | 40.0% | |
| CATCCTCCATTTCTCAAGAA+AGG | - | chr1.2:81297132-81297151 | MS.gene029463:CDS | 40.0% | |
| CATCCTTTCTTGAGAAATGG+AGG | + | chr1.2:81297138-81297157 | None:intergenic | 40.0% | |
| CATTGTGGAAGTTAAACCTC+AGG | - | chr1.2:81299370-81299389 | MS.gene029463:CDS | 40.0% | |
| CCCAAACAAAATCCTCATCA+GGG | + | chr1.2:81297565-81297584 | None:intergenic | 40.0% | |
| CCTGCAACAAAAATGTCAAG+TGG | + | chr1.2:81299919-81299938 | None:intergenic | 40.0% | |
| CTTGACATGAACCGAAATCT+CGG | + | chr1.2:81299280-81299299 | None:intergenic | 40.0% | |
| CTTTCTTGAGAAATGGAGGA+TGG | + | chr1.2:81297134-81297153 | None:intergenic | 40.0% | |
| GAAAGAGATTTAACAGGGCA+AGG | - | chr1.2:81297624-81297643 | MS.gene029463:intron | 40.0% | |
| GAAGTTCATCTCTAACAGGA+AGG | + | chr1.2:81297700-81297719 | None:intergenic | 40.0% | |
| GAATTTGCAGACCGAGATTT+CGG | - | chr1.2:81299266-81299285 | MS.gene029463:CDS | 40.0% | |
| GACAAGCCATACTGAAGAAT+GGG | - | chr1.2:81299118-81299137 | MS.gene029463:CDS | 40.0% | |
| GAGCCTGTTTCAGTTAAAAG+TGG | - | chr1.2:81299341-81299360 | MS.gene029463:CDS | 40.0% | |
| GATCAGATGAGGACATGTTT+GGG | - | chr1.2:81300032-81300051 | MS.gene029463:CDS | 40.0% | |
| GATGAAACCAACAACAGTGT+TGG | - | chr1.2:81297098-81297117 | MS.gene029463:CDS | 40.0% | |
| GCAACAGCATCAATATTCCA+CGG | + | chr1.2:81298463-81298482 | None:intergenic | 40.0% | |
| GCAACATCATCTTGCTCAAT+TGG | + | chr1.2:81297323-81297342 | None:intergenic | 40.0% | |
| GCACAAAGGAAAGAGGAAAA+TGG | - | chr1.2:81297188-81297207 | MS.gene029463:CDS | 40.0% | |
| GGAAAGAGGAAAATGGTAAG+TGG | - | chr1.2:81297195-81297214 | MS.gene029463:CDS | 40.0% | |
| GGATAAACGACACATTTGGA+AGG | - | chr1.2:81298170-81298189 | MS.gene029463:intron | 40.0% | |
| TAAAAGTGGCCCATACATTG+TGG | - | chr1.2:81299355-81299374 | MS.gene029463:CDS | 40.0% | |
| TACGCACGATGTTGCATATT+GGG | - | chr1.2:81298561-81298580 | MS.gene029463:CDS | 40.0% | |
| TATATCTCGGACGAAGGAAA+AGG | + | chr1.2:81297671-81297690 | None:intergenic | 40.0% | |
| TCACAGTTTGACCTTTGAAC+TGG | + | chr1.2:81297964-81297983 | None:intergenic | 40.0% | |
| TCCTGTTGCAGTAGAATGTT+GGG | - | chr1.2:81297785-81297804 | MS.gene029463:intron | 40.0% | |
| TCTTTCCTTTGTGCCTTCAA+TGG | + | chr1.2:81297182-81297201 | None:intergenic | 40.0% | |
| TGATCTACGATTGACAACAC+TGG | - | chr1.2:81299757-81299776 | MS.gene029463:CDS | 40.0% | |
| TGGCCTATATGAATACCAAC+AGG | + | chr1.2:81297884-81297903 | None:intergenic | 40.0% | |
| TGGGGTAATAACAAGTGCAA+GGG | - | chr1.2:81300051-81300070 | MS.gene029463:CDS | 40.0% | |
| TGGTAAGTGGGAATTCACTT+GGG | - | chr1.2:81297208-81297227 | MS.gene029463:CDS | 40.0% | |
| TTACAGCTGAAAGATGGTCT+TGG | - | chr1.2:81297248-81297267 | MS.gene029463:CDS | 40.0% | |
| TTGGGGTAATAACAAGTGCA+AGG | - | chr1.2:81300050-81300069 | MS.gene029463:CDS | 40.0% | |
| TTGTTACAGCAGTGAGAGAT+GGG | - | chr1.2:81298278-81298297 | MS.gene029463:CDS | 40.0% | |
| TTTCGGTTCATGTCAAGCTA+AGG | - | chr1.2:81299283-81299302 | MS.gene029463:CDS | 40.0% | |
| ! | ACCCTGATGAGGATTTTGTT+TGG | - | chr1.2:81297561-81297580 | MS.gene029463:intron | 40.0% |
| ! | AGCAGTTTGTTCAGAAGCAT+TGG | + | chr1.2:81300191-81300210 | None:intergenic | 40.0% |
| ! | ATTGAAGGCACAAAGGAAAG+AGG | - | chr1.2:81297181-81297200 | MS.gene029463:CDS | 40.0% |
| ! | CCACTTGACATTTTTGTTGC+AGG | - | chr1.2:81299916-81299935 | MS.gene029463:CDS | 40.0% |
| ! | GGAAGCATGTAGTGAAACAA+AGG | + | chr1.2:81297443-81297462 | None:intergenic | 40.0% |
| ! | GGTATAAGGAGTATGACACA+AGG | + | chr1.2:81298979-81298998 | None:intergenic | 40.0% |
| ! | TATCCAAAAGAAGAGCATGC+TGG | - | chr1.2:81298381-81298400 | MS.gene029463:CDS | 40.0% |
| ! | TGGCTTGTCCTGGAAAAAAA+AGG | + | chr1.2:81299107-81299126 | None:intergenic | 40.0% |
| !! | CCCTGATGAGGATTTTGTTT+GGG | - | chr1.2:81297562-81297581 | MS.gene029463:intron | 40.0% |
| !! | CGCATATGTTTTTCAGACTC+CGG | + | chr1.2:81298514-81298533 | None:intergenic | 40.0% |
| !! | GAGATTTTGAGGATGTTGCA+AGG | - | chr1.2:81300160-81300179 | MS.gene029463:CDS | 40.0% |
| !! | GCATATGTTTTTCAGACTCC+GGG | + | chr1.2:81298513-81298532 | None:intergenic | 40.0% |
| !! | GTCGATTTGATCGATCTCTT+TGG | - | chr1.2:81297483-81297502 | MS.gene029463:intron | 40.0% |
| !! | TCTTTCTGAGACAGAAAGCA+AGG | - | chr1.2:81297922-81297941 | MS.gene029463:CDS | 40.0% |
| !! | TGCGTCATGAGAAGCATTAT+AGG | - | chr1.2:81298530-81298549 | MS.gene029463:CDS | 40.0% |
| !! | TTTCTGTGCCTGATTTTGAC+TGG | - | chr1.2:81299150-81299169 | MS.gene029463:CDS | 40.0% |
| !!! | TGGGGAATTGGTTTTGGTTT+AGG | - | chr1.2:81298643-81298662 | MS.gene029463:CDS | 40.0% |
| AATGAGGGGAAAGGTTGTTC+TGG | - | chr1.2:81298069-81298088 | MS.gene029463:CDS | 45.0% | |
| AATTGCGCCGCTTAATGATG+GGG | + | chr1.2:81298431-81298450 | None:intergenic | 45.0% | |
| ACATGCTGAAATGAGGGGAA+AGG | - | chr1.2:81298060-81298079 | MS.gene029463:CDS | 45.0% | |
| ACATTCTACTGCAACAGGAG+AGG | + | chr1.2:81297784-81297803 | None:intergenic | 45.0% | |
| ACGAAGGAAAAGGACTATGG+AGG | + | chr1.2:81297661-81297680 | None:intergenic | 45.0% | |
| ACTGCACAAGCTGTTCAAGA+TGG | + | chr1.2:81298830-81298849 | None:intergenic | 45.0% | |
| AGAACCATGTTACGCTAGCA+TGG | - | chr1.2:81299536-81299555 | MS.gene029463:CDS | 45.0% | |
| AGATTTAACAGGGCAAGGCT+TGG | - | chr1.2:81297629-81297648 | MS.gene029463:intron | 45.0% | |
| AGCTATGGATTCCGCCTTAA+TGG | - | chr1.2:81298486-81298505 | MS.gene029463:CDS | 45.0% | |
| AGGTCAAACTGTGATGCTTG+GGG | - | chr1.2:81297970-81297989 | MS.gene029463:CDS | 45.0% | |
| ATAGTAGCGCTACAACGTAG+TGG | - | chr1.2:81299608-81299627 | MS.gene029463:CDS | 45.0% | |
| ATCATTAAGCGGCGCAATTC+GGG | - | chr1.2:81298432-81298451 | MS.gene029463:CDS | 45.0% | |
| ATGGAAACAGCTTCAGCACT+AGG | + | chr1.2:81298811-81298830 | None:intergenic | 45.0% | |
| CATCATTAAGCGGCGCAATT+CGG | - | chr1.2:81298431-81298450 | MS.gene029463:CDS | 45.0% | |
| CATCTCTAACAGGAAGGGTT+CGG | + | chr1.2:81297694-81297713 | None:intergenic | 45.0% | |
| CGATACAACACTCCAGAGTT+GGG | - | chr1.2:81298219-81298238 | MS.gene029463:intron | 45.0% | |
| CTCCTGTTGCAGTAGAATGT+TGG | - | chr1.2:81297784-81297803 | MS.gene029463:intron | 45.0% | |
| CTTCTTGCAGGATCTGGAAA+GGG | - | chr1.2:81298591-81298610 | MS.gene029463:CDS | 45.0% | |
| CTTGTAGAGATCATCTGAGG+AGG | - | chr1.2:81298614-81298633 | MS.gene029463:CDS | 45.0% | |
| CTTGTTACAGCAGTGAGAGA+TGG | - | chr1.2:81298277-81298296 | MS.gene029463:CDS | 45.0% | |
| CTTTCGGTCGTGAGAAGAAA+AGG | - | chr1.2:81297030-81297049 | MS.gene029463:CDS | 45.0% | |
| GAAGAAAAGGCTTCCAAGAG+TGG | - | chr1.2:81297043-81297062 | MS.gene029463:CDS | 45.0% | |
| GAATTGCGCCGCTTAATGAT+GGG | + | chr1.2:81298432-81298451 | None:intergenic | 45.0% | |
| GGAAGTTATCAACCCTGATG+AGG | - | chr1.2:81297550-81297569 | MS.gene029463:intron | 45.0% | |
| GGACAAGCCATACTGAAGAA+TGG | - | chr1.2:81299117-81299136 | MS.gene029463:CDS | 45.0% | |
| GGTTCATGACTACCACTTGA+TGG | - | chr1.2:81297583-81297602 | MS.gene029463:intron | 45.0% | |
| GTACGCACGATGTTGCATAT+TGG | - | chr1.2:81298560-81298579 | MS.gene029463:CDS | 45.0% | |
| TAGTGAAAAGCTCAGGTGGA+AGG | + | chr1.2:81297385-81297404 | None:intergenic | 45.0% | |
| TCAAATCGACCACCAAGATC+AGG | + | chr1.2:81297473-81297492 | None:intergenic | 45.0% | |
| TCCCAACATTCTACTGCAAC+AGG | + | chr1.2:81297789-81297808 | None:intergenic | 45.0% | |
| TCGATACAACACTCCAGAGT+TGG | - | chr1.2:81298218-81298237 | MS.gene029463:intron | 45.0% | |
| TGATGCTGTTGCTGAAGCTA+TGG | - | chr1.2:81298471-81298490 | MS.gene029463:CDS | 45.0% | |
| TGCTAGCGTAACATGGTTCT+AGG | + | chr1.2:81299536-81299555 | None:intergenic | 45.0% | |
| TGGTAACCAGCTTCCATTGA+AGG | - | chr1.2:81297166-81297185 | MS.gene029463:CDS | 45.0% | |
| TTCTTCTCACGACCGAAAGA+CGG | + | chr1.2:81297029-81297048 | None:intergenic | 45.0% | |
| TTGTTGCAGGGTGTGAGTAA+GGG | - | chr1.2:81299929-81299948 | MS.gene029463:CDS | 45.0% | |
| TTTGTGCCTTCAATGGAAGC+TGG | + | chr1.2:81297175-81297194 | None:intergenic | 45.0% | |
| TTTGTTGCAGGGTGTGAGTA+AGG | - | chr1.2:81299928-81299947 | MS.gene029463:CDS | 45.0% | |
| ! | AGCTTCCATTGAAGGCACAA+AGG | - | chr1.2:81297174-81297193 | MS.gene029463:CDS | 45.0% |
| ! | AGGAAGGGTTCGGTATATCT+CGG | + | chr1.2:81297684-81297703 | None:intergenic | 45.0% |
| ! | CTGGTGGTGTCTGAATTCAT+TGG | - | chr1.2:81298400-81298419 | MS.gene029463:CDS | 45.0% |
| ! | GATTCATGACTGACTCAAGC+TGG | + | chr1.2:81297904-81297923 | None:intergenic | 45.0% |
| ! | GGTGTTGCACTAATTGATCC+AGG | + | chr1.2:81298790-81298809 | None:intergenic | 45.0% |
| ! | TGGTGATGACAGATCAGATG+AGG | - | chr1.2:81300021-81300040 | MS.gene029463:CDS | 45.0% |
| ! | TTCTTCAGTATGGCTTGTCC+TGG | + | chr1.2:81299117-81299136 | None:intergenic | 45.0% |
| !! | AGATGCTGGGGAATTGGTTT+TGG | - | chr1.2:81298637-81298656 | MS.gene029463:CDS | 45.0% |
| !! | CAACACTGGCTTGAAGTAGT+TGG | - | chr1.2:81299771-81299790 | MS.gene029463:CDS | 45.0% |
| !!! | GGGCCACTTTTAACTGAAAC+AGG | + | chr1.2:81299347-81299366 | None:intergenic | 45.0% |
| AACGACACATTTGGAAGGCC+TGG | - | chr1.2:81298175-81298194 | MS.gene029463:intron | 50.0% | |
| AAGACCTATGTAGCCTCGCT+TGG | + | chr1.2:81297825-81297844 | None:intergenic | 50.0% | |
| AAGCGATTCTCTCCCAACTC+TGG | + | chr1.2:81298234-81298253 | None:intergenic | 50.0% | |
| AGCTCAGGTGGAAGGAAAGT+TGG | + | chr1.2:81297377-81297396 | None:intergenic | 50.0% | |
| ATCATCTGAGGAGGAGATGC+TGG | - | chr1.2:81298623-81298642 | MS.gene029463:CDS | 50.0% | |
| CAAATCGCAAACCCTGCTAG+AGG | - | chr1.2:81298094-81298113 | MS.gene029463:intron | 50.0% | |
| CAAGGAAACACGTCCGCAAT+GGG | + | chr1.2:81300088-81300107 | None:intergenic | 50.0% | |
| CAATCCAAGCGAGGCTACAT+AGG | - | chr1.2:81297818-81297837 | MS.gene029463:intron | 50.0% | |
| CGAATTGCGCCGCTTAATGA+TGG | + | chr1.2:81298433-81298452 | None:intergenic | 50.0% | |
| CGGACGAAGGAAAAGGACTA+TGG | + | chr1.2:81297664-81297683 | None:intergenic | 50.0% | |
| CTTCTTGCACATCCTTTCCG+CGG | + | chr1.2:81298120-81298139 | None:intergenic | 50.0% | |
| GATAGTACTATGGTGCAGCC+TGG | - | chr1.2:81298769-81298788 | MS.gene029463:CDS | 50.0% | |
| GCTTCTTGCAGGATCTGGAA+AGG | - | chr1.2:81298590-81298609 | MS.gene029463:CDS | 50.0% | |
| GGGCTTGTAGAGATCATCTG+AGG | - | chr1.2:81298611-81298630 | MS.gene029463:CDS | 50.0% | |
| GTGGGAATTCACTTGGGATG+AGG | - | chr1.2:81297214-81297233 | MS.gene029463:CDS | 50.0% | |
| GTTCGGTATATCTCGGACGA+AGG | + | chr1.2:81297677-81297696 | None:intergenic | 50.0% | |
| TCAAACTGTGATGCTTGGGG+TGG | - | chr1.2:81297973-81297992 | MS.gene029463:CDS | 50.0% | |
| TCATCTGAGGAGGAGATGCT+GGG | - | chr1.2:81298624-81298643 | MS.gene029463:CDS | 50.0% | |
| TTCAGACTCCGGGACCATTA+AGG | + | chr1.2:81298503-81298522 | None:intergenic | 50.0% | |
| ! | CCAAAAGAAGAGCATGCTGG+TGG | - | chr1.2:81298384-81298403 | MS.gene029463:CDS | 50.0% |
| ! | CCAAACCAGAGCACTCTCTT+TGG | + | chr1.2:81299240-81299259 | None:intergenic | 50.0% |
| ! | CCACCAGCATGCTCTTCTTT+TGG | + | chr1.2:81298387-81298406 | None:intergenic | 50.0% |
| ! | GGTTTTTGACCAACGGTGCA+AGG | + | chr1.2:81300106-81300125 | None:intergenic | 50.0% |
| !! | AGAGTCCAAAGAGAGTGCTC+TGG | - | chr1.2:81299232-81299251 | MS.gene029463:CDS | 50.0% |
| !! | CAAAAGAATCGCTCGGTGCT+TGG | + | chr1.2:81298743-81298762 | None:intergenic | 50.0% |
| !! | CCAAAGAGAGTGCTCTGGTT+TGG | - | chr1.2:81299237-81299256 | MS.gene029463:CDS | 50.0% |
| !! | CTTGGACTTGCTGCAGAACA+CGG | - | chr1.2:81298928-81298947 | MS.gene029463:CDS | 50.0% |
| !!! | CAAGCACCGAGCGATTCTTT+TGG | - | chr1.2:81298741-81298760 | MS.gene029463:CDS | 50.0% |
| AGACTCCGGGACCATTAAGG+CGG | + | chr1.2:81298500-81298519 | None:intergenic | 55.0% | |
| AGGAGGAGATGCTGGGGAAT+TGG | - | chr1.2:81298631-81298650 | MS.gene029463:CDS | 55.0% | |
| CATCTGAGGAGGAGATGCTG+GGG | - | chr1.2:81298625-81298644 | MS.gene029463:CDS | 55.0% | |
| CCAAGAGTGGCAACTGTTGC+TGG | - | chr1.2:81297056-81297075 | MS.gene029463:CDS | 55.0% | |
| CCAGCAACAGTTGCCACTCT+TGG | + | chr1.2:81297059-81297078 | None:intergenic | 55.0% | |
| GACGTGTTTCCTTGCACCGT+TGG | - | chr1.2:81300094-81300113 | MS.gene029463:CDS | 55.0% | |
| GATGCTTGGGGTGGATGACA+TGG | - | chr1.2:81297982-81298001 | MS.gene029463:CDS | 55.0% | |
| GCAAGGAAACACGTCCGCAA+TGG | + | chr1.2:81300089-81300108 | None:intergenic | 55.0% | |
| GCGTAGCTTCTTGCAGGATC+TGG | - | chr1.2:81298585-81298604 | MS.gene029463:CDS | 55.0% | |
| GGATTCCGCCTTAATGGTCC+CGG | - | chr1.2:81298492-81298511 | MS.gene029463:CDS | 55.0% | |
| GGCATCTCTATCGCCCATTG+CGG | - | chr1.2:81300072-81300091 | MS.gene029463:CDS | 55.0% | |
| GGCTGCTCCCCATCATTAAG+CGG | - | chr1.2:81298421-81298440 | MS.gene029463:CDS | 55.0% | |
| TCGGCCATGCTAGCGTAACA+TGG | + | chr1.2:81299543-81299562 | None:intergenic | 55.0% | |
| CCACCAAGATCAGGCGACAG+CGG | + | chr1.2:81297464-81297483 | None:intergenic | 60.0% | |
| CTTCCGCTGTCGCCTGATCT+TGG | - | chr1.2:81297458-81297477 | MS.gene029463:intron | 60.0% | |
| GCGCAATTCGGGTGAATCCG+TGG | - | chr1.2:81298443-81298462 | MS.gene029463:CDS | 60.0% | |
| TCATGCGGCTCGCCGTCTTT+CGG | - | chr1.2:81297014-81297033 | MS.gene029463:CDS | 60.0% | |
| TTGGGCGCGTAGCTTCTTGC+AGG | - | chr1.2:81298579-81298598 | MS.gene029463:CDS | 60.0% | |
| CCGCTGTCGCCTGATCTTGG+TGG | - | chr1.2:81297461-81297480 | MS.gene029463:intron | 65.0% | |
| CCTTTCCGCGGCCTCTAGCA+GGG | + | chr1.2:81298108-81298127 | None:intergenic | 65.0% | |
| GCAAACCCTGCTAGAGGCCG+CGG | - | chr1.2:81298100-81298119 | MS.gene029463:intron | 65.0% | |
| TCCTTTCCGCGGCCTCTAGC+AGG | + | chr1.2:81298109-81298128 | None:intergenic | 65.0% | |
| CCCTGCTAGAGGCCGCGGAA+AGG | - | chr1.2:81298105-81298124 | MS.gene029463:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 81296975 | 81300243 | 81296975 | ID=MS.gene029463 |
| chr1.2 | mRNA | 81296975 | 81300243 | 81296975 | ID=MS.gene029463.t1;Parent=MS.gene029463 |
| chr1.2 | exon | 81298256 | 81300243 | 81298256 | ID=MS.gene029463.t1.exon1;Parent=MS.gene029463.t1 |
| chr1.2 | CDS | 81298256 | 81300243 | 81298256 | ID=cds.MS.gene029463.t1;Parent=MS.gene029463.t1 |
| chr1.2 | exon | 81297827 | 81298100 | 81297827 | ID=MS.gene029463.t1.exon2;Parent=MS.gene029463.t1 |
| chr1.2 | CDS | 81297827 | 81298100 | 81297827 | ID=cds.MS.gene029463.t1;Parent=MS.gene029463.t1 |
| chr1.2 | exon | 81296975 | 81297280 | 81296975 | ID=MS.gene029463.t1.exon3;Parent=MS.gene029463.t1 |
| chr1.2 | CDS | 81296975 | 81297280 | 81296975 | ID=cds.MS.gene029463.t1;Parent=MS.gene029463.t1 |
| Gene Sequence |
| Protein sequence |
