Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009143.t1 | XP_024629627.1 | 99.4 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.00E+00 | 1744.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009143.t1 | Q9LRA7 | 74.9 | 867 | 206 | 4 | 1 | 855 | 1 | 867 | 0.0e+00 | 1365.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009143.t1 | A0A072U2F7 | 99.4 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.0e+00 | 1744.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene009143 | MS.gene95324 | PPI |
MS.gene009143 | MS.gene015639 | PPI |
MS.gene009143 | MS.gene026499 | PPI |
MS.gene038603 | MS.gene009143 | PPI |
MS.gene83030 | MS.gene009143 | PPI |
MS.gene009143 | MS.gene73417 | PPI |
MS.gene009143 | MS.gene029463 | PPI |
MS.gene009143 | MS.gene71778 | PPI |
MS.gene57938 | MS.gene009143 | PPI |
MS.gene009143 | MS.gene035660 | PPI |
MS.gene045478 | MS.gene009143 | PPI |
MS.gene009143 | MS.gene75183 | PPI |
MS.gene009143 | MS.gene040931 | PPI |
MS.gene95835 | MS.gene009143 | PPI |
MS.gene009143 | MS.gene031592 | PPI |
MS.gene009143 | MS.gene006702 | PPI |
MS.gene62674 | MS.gene009143 | PPI |
MS.gene009143 | MS.gene71003 | PPI |
MS.gene018379 | MS.gene009143 | PPI |
MS.gene012447 | MS.gene009143 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009143.t1 | MTR_8g063790 | 99.416 | 856 | 5 | 0 | 1 | 856 | 1 | 856 | 0.0 | 1766 |
MS.gene009143.t1 | MTR_1g109620 | 66.627 | 845 | 274 | 2 | 1 | 839 | 1 | 843 | 0.0 | 1191 |
MS.gene009143.t1 | MTR_4g080160 | 63.466 | 854 | 297 | 3 | 1 | 841 | 1 | 852 | 0.0 | 1150 |
MS.gene009143.t1 | MTR_8g105740 | 65.258 | 852 | 280 | 7 | 1 | 839 | 1 | 849 | 0.0 | 1149 |
MS.gene009143.t1 | MTR_1g032730 | 63.934 | 854 | 292 | 6 | 1 | 840 | 1 | 852 | 0.0 | 1131 |
MS.gene009143.t1 | MTR_4g129270 | 62.247 | 792 | 289 | 5 | 52 | 839 | 55 | 840 | 0.0 | 1036 |
MS.gene009143.t1 | MTR_4g129270 | 63.338 | 701 | 251 | 4 | 52 | 748 | 55 | 753 | 0.0 | 930 |
MS.gene009143.t1 | MTR_3g078210 | 60.053 | 751 | 299 | 1 | 77 | 827 | 3 | 752 | 0.0 | 926 |
MS.gene009143.t1 | MTR_3g467030 | 54.348 | 598 | 243 | 3 | 56 | 653 | 2 | 569 | 0.0 | 625 |
MS.gene009143.t1 | MTR_2g073260 | 34.207 | 763 | 426 | 21 | 52 | 787 | 122 | 835 | 1.43e-134 | 425 |
MS.gene009143.t1 | MTR_0034s0170 | 34.165 | 802 | 434 | 23 | 52 | 814 | 83 | 829 | 5.42e-132 | 417 |
MS.gene009143.t1 | MTR_8g087910 | 36.023 | 347 | 199 | 5 | 36 | 374 | 53 | 384 | 8.82e-68 | 231 |
MS.gene009143.t1 | MTR_3g076810 | 51.955 | 179 | 72 | 4 | 8 | 186 | 6 | 170 | 7.82e-52 | 179 |
MS.gene009143.t1 | MTR_8g087930 | 30.892 | 437 | 248 | 13 | 381 | 800 | 10 | 409 | 3.81e-50 | 185 |
MS.gene009143.t1 | MTR_3g467040 | 56.075 | 107 | 47 | 0 | 477 | 583 | 110 | 216 | 7.12e-33 | 127 |
MS.gene009143.t1 | MTR_3g467040 | 48.624 | 109 | 56 | 0 | 302 | 410 | 1 | 109 | 3.13e-27 | 111 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009143.t1 | AT1G23870 | 74.510 | 867 | 209 | 3 | 1 | 855 | 1 | 867 | 0.0 | 1370 |
MS.gene009143.t1 | AT1G70290 | 72.992 | 859 | 225 | 3 | 1 | 855 | 1 | 856 | 0.0 | 1338 |
MS.gene009143.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene009143.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene009143.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene009143.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene009143.t1 | AT1G60140 | 72.242 | 861 | 233 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1331 |
MS.gene009143.t1 | AT1G70290 | 68.685 | 859 | 224 | 4 | 1 | 855 | 1 | 818 | 0.0 | 1241 |
MS.gene009143.t1 | AT1G60140 | 73.580 | 757 | 194 | 1 | 1 | 751 | 1 | 757 | 0.0 | 1195 |
MS.gene009143.t1 | AT4G17770 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
MS.gene009143.t1 | AT4G17770 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
MS.gene009143.t1 | AT1G68020 | 64.019 | 856 | 291 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1156 |
MS.gene009143.t1 | AT1G68020 | 64.019 | 856 | 291 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1156 |
MS.gene009143.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
MS.gene009143.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
MS.gene009143.t1 | AT1G06410 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1126 |
MS.gene009143.t1 | AT2G18700 | 60.327 | 857 | 326 | 6 | 1 | 851 | 1 | 849 | 0.0 | 1080 |
MS.gene009143.t1 | AT1G68020 | 63.476 | 679 | 231 | 4 | 1 | 662 | 1 | 679 | 0.0 | 915 |
MS.gene009143.t1 | AT1G16980 | 35.688 | 807 | 458 | 24 | 48 | 834 | 7 | 772 | 7.05e-146 | 451 |
MS.gene009143.t1 | AT4G27550 | 33.052 | 829 | 469 | 22 | 51 | 838 | 2 | 785 | 2.38e-133 | 417 |
MS.gene009143.t1 | AT4G27550 | 32.931 | 829 | 477 | 22 | 52 | 838 | 3 | 794 | 1.25e-132 | 416 |
MS.gene009143.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene009143.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene009143.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene009143.t1 | AT1G78580 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.70e-132 | 419 |
MS.gene009143.t1 | AT1G16980 | 35.266 | 638 | 362 | 18 | 48 | 675 | 7 | 603 | 1.43e-118 | 374 |
Find 205 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAACTTCACCCTGCAAATT+TGG | 0.106547 | 8.2:-38073777 | None:intergenic |
TGGGGAATTGGTCTGGGCTT+GGG | 0.169334 | 8.2:+38074356 | MS.gene009143:CDS |
CTGGGGAATTGGTCTGGGCT+TGG | 0.187166 | 8.2:+38074355 | MS.gene009143:CDS |
CAAGATGCAGACCCTGATTT+TGG | 0.207528 | 8.2:+38074912 | MS.gene009143:CDS |
AAGAGGATCAATGAAATTTA+TGG | 0.210673 | 8.2:+38073879 | MS.gene009143:CDS |
CCAAGGGTTATGACTGTTCC+TGG | 0.261011 | 8.2:+38072787 | MS.gene009143:CDS |
GGGGAATTGGTCTGGGCTTG+GGG | 0.266295 | 8.2:+38074357 | MS.gene009143:CDS |
ATAAATCCTGCAAGGGGTTC+AGG | 0.270561 | 8.2:+38073813 | MS.gene009143:CDS |
TTGAGAATTTCATCCCTTAC+TGG | 0.274615 | 8.2:-38073414 | None:intergenic |
CTCTAAGCTAAAAGAGATTC+AGG | 0.278734 | 8.2:+38073650 | MS.gene009143:CDS |
CTTCTCTGAGTGGGGCCATC+AGG | 0.282889 | 8.2:+38074144 | MS.gene009143:CDS |
AAAGATAAGAAAGTTATTCT+TGG | 0.285155 | 8.2:+38073681 | MS.gene009143:CDS |
CTGGAATTGGGCAAGATGTT+TGG | 0.285774 | 8.2:-38075412 | None:intergenic |
GAATCAGATGTTAGTTCTTC+TGG | 0.292836 | 8.2:+38072832 | MS.gene009143:CDS |
GCAAAGATCATTATACTAAA+AGG | 0.294692 | 8.2:+38074330 | MS.gene009143:CDS |
CAAGTGGTCCAGCAATTCTT+TGG | 0.301605 | 8.2:-38074946 | None:intergenic |
ATAACCCTTGGAAGACTTCT+TGG | 0.323153 | 8.2:-38072775 | None:intergenic |
TGAGAAGGTTCTCTTGAATA+TGG | 0.324266 | 8.2:+38075158 | MS.gene009143:CDS |
TACTCATGATGTGGCATATT+GGG | 0.324520 | 8.2:+38074274 | MS.gene009143:CDS |
TCCCATCATCTGAAATTTAC+CGG | 0.324934 | 8.2:+38073385 | MS.gene009143:CDS |
CAGCAATTCTTTGGCTTGGC+AGG | 0.325831 | 8.2:-38074937 | None:intergenic |
CAACTTCACCCTGCAAATTT+GGG | 0.326749 | 8.2:-38073776 | None:intergenic |
CACGAAATCTGGTGGATTAC+CGG | 0.327222 | 8.2:-38075187 | None:intergenic |
TCCTTCCCTGAACCCCTTGC+AGG | 0.330095 | 8.2:-38073819 | None:intergenic |
AATATTGTGTTCATTGTTAG+TGG | 0.330780 | 8.2:+38074572 | MS.gene009143:CDS |
TTTAGTATAATGATCTTTGC+AGG | 0.332751 | 8.2:-38074327 | None:intergenic |
GCTTGGCAGGAGCCAAAATC+AGG | 0.332771 | 8.2:-38074924 | None:intergenic |
ACTAAAAGGTGCTGGGGAAT+TGG | 0.344491 | 8.2:+38074344 | MS.gene009143:CDS |
TCTCAAAAGAAACCTGGAAT+TGG | 0.347950 | 8.2:-38075425 | None:intergenic |
AAGGTGCTGGGGAATTGGTC+TGG | 0.348234 | 8.2:+38074349 | MS.gene009143:CDS |
TGGAATTGGGCAAGATGTTT+GGG | 0.350397 | 8.2:-38075411 | None:intergenic |
CTTGTTGTGTCTGAGTTCAT+TGG | 0.350593 | 8.2:+38074113 | MS.gene009143:CDS |
GAGATATTGATACTGCTAAA+TGG | 0.353153 | 8.2:+38072908 | MS.gene009143:CDS |
CCAATGCACATCACGAAATC+TGG | 0.354845 | 8.2:-38075198 | None:intergenic |
CGATTTCATCGAGTTAAACT+TGG | 0.356832 | 8.2:+38073342 | MS.gene009143:CDS |
GGGTTCAGGGAAGGATGTTC+AGG | 0.357166 | 8.2:+38073827 | MS.gene009143:CDS |
TTGTTGAATTCGGATTTAAT+TGG | 0.359446 | 8.2:+38073441 | MS.gene009143:CDS |
ATTTGTTTGCGGATCTTGAT+TGG | 0.360978 | 8.2:+38074796 | MS.gene009143:CDS |
TTAAGCACAGATATGACTTC+AGG | 0.363121 | 8.2:-38074527 | None:intergenic |
GGGATTATTTCTGACCTTGA+TGG | 0.367224 | 8.2:+38072808 | MS.gene009143:CDS |
CTGCCAAGCCAAAGAATTGC+TGG | 0.368870 | 8.2:+38074938 | MS.gene009143:CDS |
TCTCAAAGGATTGTTGAATT+CGG | 0.369451 | 8.2:+38073431 | MS.gene009143:CDS |
CATACAAAAGAACTAGTAGA+AGG | 0.371718 | 8.2:+38074441 | MS.gene009143:CDS |
ATAAGCACTCTTCTCGAAAC+GGG | 0.382221 | 8.2:-38073946 | None:intergenic |
TTTAGCTTAGAGGATGTAGA+AGG | 0.386302 | 8.2:-38073639 | None:intergenic |
AGCATATGGGTAGCATATAA+TGG | 0.386638 | 8.2:-38073161 | None:intergenic |
CAAACATCTTGCCCAATTCC+AGG | 0.387739 | 8.2:+38075413 | MS.gene009143:CDS |
GGGCCATCAGGGTCAATCCC+TGG | 0.389275 | 8.2:+38074156 | MS.gene009143:CDS |
ATAAATTTCATTGATCCTCT+TGG | 0.390480 | 8.2:-38073877 | None:intergenic |
TAACCCTTGGAAGACTTCTT+GGG | 0.392932 | 8.2:-38072774 | None:intergenic |
TATGAATTTAGCCCTCAGTA+TGG | 0.393080 | 8.2:+38074202 | MS.gene009143:CDS |
ATTCTATTACAATTAAAAGA+TGG | 0.393081 | 8.2:+38072955 | MS.gene009143:CDS |
GCAGCAGAACCCAAATTTGC+AGG | 0.398626 | 8.2:+38073767 | MS.gene009143:CDS |
GATGTTGTAAAGTTGCTTGA+TGG | 0.401203 | 8.2:+38075363 | MS.gene009143:CDS |
CTGCAAACAATATATTTGTA+TGG | 0.405626 | 8.2:-38074026 | None:intergenic |
GAATCTAAGCGCGGACATAT+AGG | 0.407020 | 8.2:+38073531 | MS.gene009143:CDS |
CTTCTCAGCTACCAAACCTT+TGG | 0.411552 | 8.2:-38075142 | None:intergenic |
GCCATCTTTCTTGATTATGA+TGG | 0.412733 | 8.2:+38074464 | MS.gene009143:CDS |
ATCATTATACTAAAAGGTGC+TGG | 0.413565 | 8.2:+38074336 | MS.gene009143:CDS |
GTTGTTCACCTTCTCTGAGT+GGG | 0.416077 | 8.2:+38074135 | MS.gene009143:CDS |
TTCTATTACAATTAAAAGAT+GGG | 0.419809 | 8.2:+38072956 | MS.gene009143:CDS |
GTCCGGTAAATTTCAGATGA+TGG | 0.420016 | 8.2:-38073387 | None:intergenic |
ATCACCATGATCTGAGCATA+TGG | 0.421283 | 8.2:-38073175 | None:intergenic |
CTCAAAAGAAACCTGGAATT+GGG | 0.424009 | 8.2:-38075424 | None:intergenic |
TGAAATTGCTCAGAGATTAC+TGG | 0.424931 | 8.2:+38073047 | MS.gene009143:CDS |
GTACTCATGATGTGGCATAT+TGG | 0.429323 | 8.2:+38074273 | MS.gene009143:CDS |
CAAGAGATTCTCTGAATGAA+TGG | 0.436703 | 8.2:+38074600 | MS.gene009143:CDS |
CAATATATTTGTATGGGACT+AGG | 0.441769 | 8.2:-38074019 | None:intergenic |
CTGCTAAATGGTGTTTCAGT+TGG | 0.444648 | 8.2:+38072920 | MS.gene009143:CDS |
CAAATATATTGTTTGCAGAC+AGG | 0.445837 | 8.2:+38074031 | MS.gene009143:CDS |
CTTTGACCGAGTGCTTTGGC+AGG | 0.445978 | 8.2:+38073200 | MS.gene009143:CDS |
TTTACCGGACTTTGCCAGTA+AGG | 0.446014 | 8.2:+38073400 | MS.gene009143:CDS |
CAGACAGGGAACTGCAAAGC+TGG | 0.446931 | 8.2:+38074046 | MS.gene009143:CDS |
ATGTTAGTTCTTCTGGATGT+CGG | 0.447873 | 8.2:+38072839 | MS.gene009143:CDS |
CTGCAGGTCATGGGGTAGAA+AGG | 0.448467 | 8.2:-38073091 | None:intergenic |
GATGGAATAGCGACTCTGAA+TGG | 0.448564 | 8.2:+38074763 | MS.gene009143:intron |
ATCGCTTTGACCGAGTGCTT+TGG | 0.451315 | 8.2:+38073196 | MS.gene009143:CDS |
TGCGGATCTTGATTGGAAAC+AGG | 0.453319 | 8.2:+38074803 | MS.gene009143:CDS |
CATATAGGACTTGATTACTT+TGG | 0.456053 | 8.2:+38073546 | MS.gene009143:CDS |
ACAGGGAGTAACCAAAGGTT+TGG | 0.457006 | 8.2:+38075131 | MS.gene009143:intron |
GTTTACATCATGCAAACTGC+TGG | 0.460290 | 8.2:+38074622 | MS.gene009143:CDS |
CCAGATTTCGTGATGTGCAT+TGG | 0.463267 | 8.2:+38075198 | MS.gene009143:CDS |
GGCAAACATGTTGCCGCTGC+AGG | 0.463803 | 8.2:+38072879 | MS.gene009143:CDS |
TGAAGTCAAGGAAAGTGCTT+TGG | 0.467204 | 8.2:+38074878 | MS.gene009143:CDS |
TAAATCCTGCAAGGGGTTCA+GGG | 0.467451 | 8.2:+38073814 | MS.gene009143:CDS |
CACAGATATGACTTCAGGGC+TGG | 0.467927 | 8.2:-38074522 | None:intergenic |
TGTTAGTTCTTCTGGATGTC+GGG | 0.472937 | 8.2:+38072840 | MS.gene009143:CDS |
CAAAGGTTTGGTAGCTGAGA+AGG | 0.472991 | 8.2:+38075143 | MS.gene009143:CDS |
AGGTGCTGGGGAATTGGTCT+GGG | 0.473831 | 8.2:+38074350 | MS.gene009143:CDS |
CTGTGCTCTCAAAAGAAACC+TGG | 0.476062 | 8.2:-38075431 | None:intergenic |
AGAGTTATTTCACTTTCTCA+TGG | 0.477242 | 8.2:+38074383 | MS.gene009143:CDS |
CTGCAGTAGAATGCTAGGTC+TGG | 0.477809 | 8.2:+38073503 | MS.gene009143:CDS |
GTTGCATCGTCAATGCTGTA+AGG | 0.478965 | 8.2:+38073985 | MS.gene009143:CDS |
TTCTCTGAGTGGGGCCATCA+GGG | 0.481545 | 8.2:+38074145 | MS.gene009143:CDS |
ATGAATTTAGCCCTCAGTAT+GGG | 0.482655 | 8.2:+38074203 | MS.gene009143:CDS |
CAAGGGTTATGACTGTTCCT+GGG | 0.488044 | 8.2:+38072788 | MS.gene009143:CDS |
CAAAGAATTGCTGGACCACT+TGG | 0.490557 | 8.2:+38074947 | MS.gene009143:CDS |
TCTTGCTGCAGTAGAATGCT+AGG | 0.494534 | 8.2:+38073498 | MS.gene009143:CDS |
TTGTGTTCATTGTTAGTGGA+AGG | 0.496110 | 8.2:+38074576 | MS.gene009143:CDS |
AGCAACTGCATCTATATCCC+AGG | 0.496254 | 8.2:-38074174 | None:intergenic |
TCCGGTAAATTTCAGATGAT+GGG | 0.500703 | 8.2:-38073386 | None:intergenic |
TCAAATTATAAATCCTGCAA+GGG | 0.500735 | 8.2:+38073806 | MS.gene009143:CDS |
TCTGTATACGACTGCATGAC+AGG | 0.500792 | 8.2:-38074834 | None:intergenic |
GGTCCAGCAATTCTTTGGCT+TGG | 0.501011 | 8.2:-38074941 | None:intergenic |
ACCCAAACAAAATCATCATC+GGG | 0.501271 | 8.2:-38073276 | None:intergenic |
TGCTAAATGGTGTTTCAGTT+GGG | 0.502656 | 8.2:+38072921 | MS.gene009143:CDS |
CATCCCTTACTGGCAAAGTC+CGG | 0.504874 | 8.2:-38073404 | None:intergenic |
CTCTTGAATATGGTTAATGC+CGG | 0.507275 | 8.2:+38075168 | MS.gene009143:CDS |
ATGGAATAGCGACTCTGAAT+GGG | 0.507294 | 8.2:+38074764 | MS.gene009143:CDS |
AATAAGCACTCTTCTCGAAA+CGG | 0.515130 | 8.2:-38073947 | None:intergenic |
CTACCCATATGCTCAGATCA+TGG | 0.515637 | 8.2:+38073171 | MS.gene009143:CDS |
AACCCAAACAAAATCATCAT+CGG | 0.516929 | 8.2:-38073277 | None:intergenic |
GAACCAGCAATTGTTAAAAG+AGG | 0.517681 | 8.2:+38074987 | MS.gene009143:CDS |
ACAGATATGACTTCAGGGCT+GGG | 0.520588 | 8.2:-38074521 | None:intergenic |
AAATATATTGTTTGCAGACA+GGG | 0.522683 | 8.2:+38074032 | MS.gene009143:CDS |
ATGGTGTTTCAGTTGGGATG+AGG | 0.523696 | 8.2:+38072927 | MS.gene009143:CDS |
TAAGCACAGATATGACTTCA+GGG | 0.524391 | 8.2:-38074526 | None:intergenic |
GGCCATCAGGGTCAATCCCT+GGG | 0.525071 | 8.2:+38074157 | MS.gene009143:CDS |
GTTCTTCTGGATGTCGGGAG+CGG | 0.526826 | 8.2:+38072845 | MS.gene009143:CDS |
TCATTATACTAAAAGGTGCT+GGG | 0.528112 | 8.2:+38074337 | MS.gene009143:CDS |
TGCTGATACAATATGGTCAA+TGG | 0.528241 | 8.2:-38074420 | None:intergenic |
GGAAACAAGTCATTTGTTTG+CGG | 0.528499 | 8.2:+38074785 | MS.gene009143:CDS |
TTCAAATTATAAATCCTGCA+AGG | 0.529329 | 8.2:+38073805 | MS.gene009143:CDS |
ATCGTCAATGCTGTAAGGGA+TGG | 0.532615 | 8.2:+38073990 | MS.gene009143:CDS |
TGGATCTAATATTGAAGTCA+AGG | 0.535654 | 8.2:+38074866 | MS.gene009143:CDS |
TGAGATAGATGCTAGTGAGC+AGG | 0.537498 | 8.2:+38073023 | MS.gene009143:CDS |
CCAGGAACAGTCATAACCCT+TGG | 0.540553 | 8.2:-38072787 | None:intergenic |
GCTTAACTTCAACAATATGC+TGG | 0.541548 | 8.2:-38075010 | None:intergenic |
CAATCTGAAATTTCTAGCTG+TGG | 0.541729 | 8.2:+38073734 | MS.gene009143:CDS |
GCCATCATAATCAAGAAAGA+TGG | 0.544414 | 8.2:-38074465 | None:intergenic |
TTGTTCACCTTCTCTGAGTG+GGG | 0.546280 | 8.2:+38074136 | MS.gene009143:CDS |
TGTGTTCATTGTTAGTGGAA+GGG | 0.547481 | 8.2:+38074577 | MS.gene009143:CDS |
TATTGTTGAAGTTAAGCCAC+AGG | 0.548984 | 8.2:+38075016 | MS.gene009143:CDS |
CAGATATGACTTCAGGGCTG+GGG | 0.549497 | 8.2:-38074520 | None:intergenic |
CTGGGACTTGCAGCTGAACA+TGG | 0.550416 | 8.2:+38074641 | MS.gene009143:CDS |
AATCGTTTCCTCAAGAAAGT+AGG | 0.550967 | 8.2:-38073324 | None:intergenic |
TAAGAAAGTTATTCTTGGTG+TGG | 0.551636 | 8.2:+38073686 | MS.gene009143:CDS |
TGAATTTAGCCCTCAGTATG+GGG | 0.553092 | 8.2:+38074204 | MS.gene009143:CDS |
TGCAAACAATATATTTGTAT+GGG | 0.553617 | 8.2:-38074025 | None:intergenic |
GGAAGACTTCTTGGGGTGTG+AGG | 0.553746 | 8.2:-38072766 | None:intergenic |
TGCAAAGCTGGATGAAGCTG+TGG | 0.555064 | 8.2:+38074058 | MS.gene009143:CDS |
AGCATCTATCTCAACCTTGA+GGG | 0.558399 | 8.2:-38073013 | None:intergenic |
TTACCGGACTTTGCCAGTAA+GGG | 0.558832 | 8.2:+38073401 | MS.gene009143:CDS |
CATAAGCCTGCCAAAGCACT+CGG | 0.561670 | 8.2:-38073206 | None:intergenic |
TGATACTGAGGTAATCTATG+TGG | 0.564061 | 8.2:+38072987 | MS.gene009143:CDS |
TCACCATGATCTGAGCATAT+GGG | 0.565672 | 8.2:-38073174 | None:intergenic |
GAGCGGTCAATGATAATGAC+TGG | 0.567271 | 8.2:-38073918 | None:intergenic |
TCAAGGTCAGAAATAATCCC+AGG | 0.567364 | 8.2:-38072805 | None:intergenic |
TCCTGCAAGGGGTTCAGGGA+AGG | 0.568476 | 8.2:+38073818 | MS.gene009143:CDS |
GGTTGTTCACCTTCTCTGAG+TGG | 0.569153 | 8.2:+38074134 | MS.gene009143:CDS |
GATTTCATCGAGTTAAACTT+GGG | 0.570858 | 8.2:+38073343 | MS.gene009143:CDS |
CAGGATTTATAATTTGAACA+AGG | 0.572858 | 8.2:-38073800 | None:intergenic |
AATATTTGCAGACAAAGTCA+TGG | 0.573166 | 8.2:+38073242 | MS.gene009143:CDS |
GATACTGAGGTAATCTATGT+GGG | 0.575365 | 8.2:+38072988 | MS.gene009143:CDS |
TATTCTTGGTGTGGACGACA+TGG | 0.577773 | 8.2:+38073695 | MS.gene009143:CDS |
AGATATGACTTCAGGGCTGG+GGG | 0.578681 | 8.2:-38074519 | None:intergenic |
AATCTATGTGGGTTCCCTCA+AGG | 0.580394 | 8.2:+38072999 | MS.gene009143:CDS |
CATATCGATAGTGTTTCTCA+TGG | 0.584215 | 8.2:-38074247 | None:intergenic |
TCTTTACAGGGAGTAACCAA+AGG | 0.585367 | 8.2:+38075126 | MS.gene009143:intron |
TTTGATTTGTTGAGGTAGCG+AGG | 0.586241 | 8.2:-38075386 | None:intergenic |
CGGTAGGAATTCACATGGGT+AGG | 0.588120 | 8.2:+38073595 | MS.gene009143:CDS |
ATCCCAGGGATTGACCCTGA+TGG | 0.588505 | 8.2:-38074159 | None:intergenic |
ATACAAAAGAACTAGTAGAA+GGG | 0.590862 | 8.2:+38074442 | MS.gene009143:CDS |
AACCCTTGGAAGACTTCTTG+GGG | 0.592251 | 8.2:-38072773 | None:intergenic |
TCGTATACAGAAGCAACTGA+TGG | 0.593251 | 8.2:+38074846 | MS.gene009143:CDS |
ACACCCCAAGAAGTCTTCCA+AGG | 0.595682 | 8.2:+38072770 | MS.gene009143:CDS |
CTACCCATGTGAATTCCTAC+CGG | 0.597503 | 8.2:-38073594 | None:intergenic |
ATGATGGGAAAGGACTATGA+AGG | 0.602097 | 8.2:-38073371 | None:intergenic |
AAGCTTATTTAATTGCCAAG+AGG | 0.604527 | 8.2:+38073862 | MS.gene009143:CDS |
CGGGAGCTGATGGTAACGAC+GGG | 0.607532 | 8.2:-38075275 | None:intergenic |
TAGCATCTATCTCAACCTTG+AGG | 0.607564 | 8.2:-38073014 | None:intergenic |
TAAATTTCAGATGATGGGAA+AGG | 0.607697 | 8.2:-38073381 | None:intergenic |
GTAAGGGATGAAATTCTCAA+AGG | 0.608917 | 8.2:+38073417 | MS.gene009143:CDS |
CAAATTATAAATCCTGCAAG+GGG | 0.610053 | 8.2:+38073807 | MS.gene009143:CDS |
TTTACATCATGCAAACTGCT+GGG | 0.611466 | 8.2:+38074623 | MS.gene009143:CDS |
ATGCACATCACGAAATCTGG+TGG | 0.613992 | 8.2:-38075195 | None:intergenic |
CTGATGGCCCCACTCAGAGA+AGG | 0.614227 | 8.2:-38074143 | None:intergenic |
TGATGTGCATTGGAGATGAT+AGG | 0.616649 | 8.2:+38075208 | MS.gene009143:CDS |
CATTATACTAAAAGGTGCTG+GGG | 0.617606 | 8.2:+38074338 | MS.gene009143:CDS |
CAGCAGAACCCAAATTTGCA+GGG | 0.618312 | 8.2:+38073768 | MS.gene009143:CDS |
TAACATCTGATTCACCATCA+AGG | 0.622114 | 8.2:-38072822 | None:intergenic |
ATATGTTAGTACTCATGATG+TGG | 0.622726 | 8.2:+38074265 | MS.gene009143:CDS |
CAGGTCATGGGGTAGAAAGG+TGG | 0.624978 | 8.2:-38073088 | None:intergenic |
ACTGGATGACTTTAATTGCG+TGG | 0.625192 | 8.2:+38073065 | MS.gene009143:CDS |
CTTGGCAGGAGCCAAAATCA+GGG | 0.629827 | 8.2:-38074923 | None:intergenic |
TCGTCAATGCTGTAAGGGAT+GGG | 0.634025 | 8.2:+38073991 | MS.gene009143:CDS |
GAATTTAGCCCTCAGTATGG+GGG | 0.635859 | 8.2:+38074205 | MS.gene009143:CDS |
GGTAGGTAGGAAGCCTAGCA+AGG | 0.637239 | 8.2:+38075314 | MS.gene009143:CDS |
GGTAGCATATAATGGAAGAG+AGG | 0.639482 | 8.2:-38073153 | None:intergenic |
AAGTAGGCAAAATCATCAAG+TGG | 0.641749 | 8.2:-38073308 | None:intergenic |
CACCCCAAGAAGTCTTCCAA+GGG | 0.641869 | 8.2:+38072771 | MS.gene009143:CDS |
GCAACTGCATCTATATCCCA+GGG | 0.642398 | 8.2:-38074173 | None:intergenic |
TCAAGGAAAGTGCTTTGGTG+TGG | 0.650646 | 8.2:+38074883 | MS.gene009143:CDS |
TAGCAAGAACACTTTCCAAG+TGG | 0.651389 | 8.2:-38074962 | None:intergenic |
TCGGGAGCTGATGGTAACGA+CGG | 0.659800 | 8.2:-38075276 | None:intergenic |
TTTGCCGGTAGGAATTCACA+TGG | 0.662631 | 8.2:+38073590 | MS.gene009143:CDS |
TTGCATCGTCAATGCTGTAA+GGG | 0.663687 | 8.2:+38073986 | MS.gene009143:CDS |
TAAGCACTCTTCTCGAAACG+GGG | 0.682811 | 8.2:-38073945 | None:intergenic |
GCAAAGCTGGATGAAGCTGT+GGG | 0.684464 | 8.2:+38074059 | MS.gene009143:CDS |
ACAACAAGCATGCTTGTACG+AGG | 0.685754 | 8.2:-38074098 | None:intergenic |
TCGGGAGCGGAAAATCATTG+TGG | 0.689766 | 8.2:+38072858 | MS.gene009143:CDS |
TCTCGAAACGGGGAACAGAG+CGG | 0.692951 | 8.2:-38073935 | None:intergenic |
GGATCTTGATTGGAAACAGG+TGG | 0.695331 | 8.2:+38074806 | MS.gene009143:CDS |
CTGGACTATGAATCTAAGCG+CGG | 0.708845 | 8.2:+38073522 | MS.gene009143:CDS |
TTGCCGGTAGGAATTCACAT+GGG | 0.730503 | 8.2:+38073591 | MS.gene009143:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTTTCTATTTTCTTT+TGG | - | chr8.2:38074716-38074735 | None:intergenic | 10.0% |
!! | ATTCTATTACAATTAAAAGA+TGG | + | chr8.2:38072955-38072974 | MS.gene009143:CDS | 15.0% |
!! | TTCTATTACAATTAAAAGAT+GGG | + | chr8.2:38072956-38072975 | MS.gene009143:CDS | 15.0% |
!!! | AAATTTTGATAAATATAGTG+CGG | - | chr8.2:38073572-38073591 | None:intergenic | 15.0% |
!!! | GTTTTATTAATATAAGATTG+TGG | - | chr8.2:38074500-38074519 | None:intergenic | 15.0% |
!!! | TATATTTATCAAAATTTTGC+CGG | + | chr8.2:38073575-38073594 | MS.gene009143:CDS | 15.0% |
!! | AAAGATAAGAAAGTTATTCT+TGG | + | chr8.2:38073681-38073700 | MS.gene009143:CDS | 20.0% |
!! | TGCAAACAATATATTTGTAT+GGG | - | chr8.2:38074028-38074047 | None:intergenic | 20.0% |
!!! | AACAATGAACACAATATTTT+TGG | - | chr8.2:38074570-38074589 | None:intergenic | 20.0% |
!!! | AATTGTTTTAATTGATGTCA+TGG | + | chr8.2:38075097-38075116 | MS.gene009143:intron | 20.0% |
!!! | TGTATTTTTTTATTTGCAGA+TGG | + | chr8.2:38074745-38074764 | MS.gene009143:intron | 20.0% |
!!! | TTTTTCTATTTTCTTTTGGT+GGG | - | chr8.2:38074712-38074731 | None:intergenic | 20.0% |
!!! | TTTTTTCTATTTTCTTTTGG+TGG | - | chr8.2:38074713-38074732 | None:intergenic | 20.0% |
! | AAATATATTGTTTGCAGACA+GGG | + | chr8.2:38074032-38074051 | MS.gene009143:CDS | 25.0% |
! | AAGAGGATCAATGAAATTTA+TGG | + | chr8.2:38073879-38073898 | MS.gene009143:CDS | 25.0% |
! | AATATTGTGTTCATTGTTAG+TGG | + | chr8.2:38074572-38074591 | MS.gene009143:CDS | 25.0% |
! | ATAAATTTCATTGATCCTCT+TGG | - | chr8.2:38073880-38073899 | None:intergenic | 25.0% |
! | ATACAAAAGAACTAGTAGAA+GGG | + | chr8.2:38074442-38074461 | MS.gene009143:CDS | 25.0% |
! | CAGGATTTATAATTTGAACA+AGG | - | chr8.2:38073803-38073822 | None:intergenic | 25.0% |
! | CTGCAAACAATATATTTGTA+TGG | - | chr8.2:38074029-38074048 | None:intergenic | 25.0% |
! | GCAAAGATCATTATACTAAA+AGG | + | chr8.2:38074330-38074349 | MS.gene009143:CDS | 25.0% |
! | TCAAATTATAAATCCTGCAA+GGG | + | chr8.2:38073806-38073825 | MS.gene009143:CDS | 25.0% |
! | TTCAAATTATAAATCCTGCA+AGG | + | chr8.2:38073805-38073824 | MS.gene009143:CDS | 25.0% |
! | TTGTTGAATTCGGATTTAAT+TGG | + | chr8.2:38073441-38073460 | MS.gene009143:CDS | 25.0% |
! | TTTAGTATAATGATCTTTGC+AGG | - | chr8.2:38074330-38074349 | None:intergenic | 25.0% |
!! | TTTTCTATTTTCTTTTGGTG+GGG | - | chr8.2:38074711-38074730 | None:intergenic | 25.0% |
!! | TTTTGTATGCTGATACAATA+TGG | - | chr8.2:38074430-38074449 | None:intergenic | 25.0% |
AACCCAAACAAAATCATCAT+CGG | - | chr8.2:38073280-38073299 | None:intergenic | 30.0% | |
AAGCTTATTTAATTGCCAAG+AGG | + | chr8.2:38073862-38073881 | MS.gene009143:CDS | 30.0% | |
AATATTTGCAGACAAAGTCA+TGG | + | chr8.2:38073242-38073261 | MS.gene009143:CDS | 30.0% | |
AATTTGAAAAACTCTACCTG+TGG | - | chr8.2:38075035-38075054 | None:intergenic | 30.0% | |
ATATGTTAGTACTCATGATG+TGG | + | chr8.2:38074265-38074284 | MS.gene009143:CDS | 30.0% | |
CAAATATATTGTTTGCAGAC+AGG | + | chr8.2:38074031-38074050 | MS.gene009143:CDS | 30.0% | |
CAAATTATAAATCCTGCAAG+GGG | + | chr8.2:38073807-38073826 | MS.gene009143:CDS | 30.0% | |
CAATATATTTGTATGGGACT+AGG | - | chr8.2:38074022-38074041 | None:intergenic | 30.0% | |
CATACAAAAGAACTAGTAGA+AGG | + | chr8.2:38074441-38074460 | MS.gene009143:CDS | 30.0% | |
CATATAGGACTTGATTACTT+TGG | + | chr8.2:38073546-38073565 | MS.gene009143:CDS | 30.0% | |
GAGATATTGATACTGCTAAA+TGG | + | chr8.2:38072908-38072927 | MS.gene009143:CDS | 30.0% | |
GATTTCATCGAGTTAAACTT+GGG | + | chr8.2:38073343-38073362 | MS.gene009143:CDS | 30.0% | |
TAAGAAAGTTATTCTTGGTG+TGG | + | chr8.2:38073686-38073705 | MS.gene009143:CDS | 30.0% | |
TCTCAAAGGATTGTTGAATT+CGG | + | chr8.2:38073431-38073450 | MS.gene009143:CDS | 30.0% | |
TGGATCTAATATTGAAGTCA+AGG | + | chr8.2:38074866-38074885 | MS.gene009143:CDS | 30.0% | |
! | AGAAAATATTTTGCCTTGCT+AGG | - | chr8.2:38075330-38075349 | None:intergenic | 30.0% |
! | AGAGTTATTTCACTTTCTCA+TGG | + | chr8.2:38074383-38074402 | MS.gene009143:CDS | 30.0% |
! | ATCATTATACTAAAAGGTGC+TGG | + | chr8.2:38074336-38074355 | MS.gene009143:CDS | 30.0% |
! | TCATGGATTTTCTCTTTACA+GGG | + | chr8.2:38075114-38075133 | MS.gene009143:intron | 30.0% |
! | TTTATCAAAATTTTGCCGGT+AGG | + | chr8.2:38073579-38073598 | MS.gene009143:CDS | 30.0% |
! | TTTCACTTTCTCATGGTTTT+AGG | + | chr8.2:38074390-38074409 | MS.gene009143:CDS | 30.0% |
!! | GACGACATGGATATTTTTAA+GGG | + | chr8.2:38073708-38073727 | MS.gene009143:CDS | 30.0% |
!! | TAAATTTCAGATGATGGGAA+AGG | - | chr8.2:38073384-38073403 | None:intergenic | 30.0% |
!! | TCATTATACTAAAAGGTGCT+GGG | + | chr8.2:38074337-38074356 | MS.gene009143:CDS | 30.0% |
!!! | CTGAACATGGTTACTTTTTA+AGG | + | chr8.2:38074654-38074673 | MS.gene009143:CDS | 30.0% |
AAGTAGGCAAAATCATCAAG+TGG | - | chr8.2:38073311-38073330 | None:intergenic | 35.0% | |
AATAAGCACTCTTCTCGAAA+CGG | - | chr8.2:38073950-38073969 | None:intergenic | 35.0% | |
AATCGTTTCCTCAAGAAAGT+AGG | - | chr8.2:38073327-38073346 | None:intergenic | 35.0% | |
ACCCAAACAAAATCATCATC+GGG | - | chr8.2:38073279-38073298 | None:intergenic | 35.0% | |
AGCATATGGGTAGCATATAA+TGG | - | chr8.2:38073164-38073183 | None:intergenic | 35.0% | |
ATGAATTTAGCCCTCAGTAT+GGG | + | chr8.2:38074203-38074222 | MS.gene009143:CDS | 35.0% | |
ATTTGTTTGCGGATCTTGAT+TGG | + | chr8.2:38074796-38074815 | MS.gene009143:CDS | 35.0% | |
CAAGAGATTCTCTGAATGAA+TGG | + | chr8.2:38074600-38074619 | MS.gene009143:CDS | 35.0% | |
CATATCGATAGTGTTTCTCA+TGG | - | chr8.2:38074250-38074269 | None:intergenic | 35.0% | |
CGATTTCATCGAGTTAAACT+TGG | + | chr8.2:38073342-38073361 | MS.gene009143:CDS | 35.0% | |
CTCAAAAGAAACCTGGAATT+GGG | - | chr8.2:38075427-38075446 | None:intergenic | 35.0% | |
CTCTAAGCTAAAAGAGATTC+AGG | + | chr8.2:38073650-38073669 | MS.gene009143:CDS | 35.0% | |
CTCTTGAATATGGTTAATGC+CGG | + | chr8.2:38075168-38075187 | MS.gene009143:CDS | 35.0% | |
CTGCAGAAAAAGTTCTATCT+TGG | + | chr8.2:38073108-38073127 | MS.gene009143:CDS | 35.0% | |
GAACCAGCAATTGTTAAAAG+AGG | + | chr8.2:38074987-38075006 | MS.gene009143:CDS | 35.0% | |
GATACTGAGGTAATCTATGT+GGG | + | chr8.2:38072988-38073007 | MS.gene009143:CDS | 35.0% | |
GATGTTGTAAAGTTGCTTGA+TGG | + | chr8.2:38075363-38075382 | MS.gene009143:CDS | 35.0% | |
GCCATCATAATCAAGAAAGA+TGG | - | chr8.2:38074468-38074487 | None:intergenic | 35.0% | |
GCCATCTTTCTTGATTATGA+TGG | + | chr8.2:38074464-38074483 | MS.gene009143:CDS | 35.0% | |
GCTTAACTTCAACAATATGC+TGG | - | chr8.2:38075013-38075032 | None:intergenic | 35.0% | |
GGAAACAAGTCATTTGTTTG+CGG | + | chr8.2:38074785-38074804 | MS.gene009143:CDS | 35.0% | |
GTAAGGGATGAAATTCTCAA+AGG | + | chr8.2:38073417-38073436 | MS.gene009143:CDS | 35.0% | |
TAACATCTGATTCACCATCA+AGG | - | chr8.2:38072825-38072844 | None:intergenic | 35.0% | |
TAAGCACAGATATGACTTCA+GGG | - | chr8.2:38074529-38074548 | None:intergenic | 35.0% | |
TACTCATGATGTGGCATATT+GGG | + | chr8.2:38074274-38074293 | MS.gene009143:CDS | 35.0% | |
TATGAATTTAGCCCTCAGTA+TGG | + | chr8.2:38074202-38074221 | MS.gene009143:CDS | 35.0% | |
TATTGTTGAAGTTAAGCCAC+AGG | + | chr8.2:38075016-38075035 | MS.gene009143:CDS | 35.0% | |
TCCGGTAAATTTCAGATGAT+GGG | - | chr8.2:38073389-38073408 | None:intergenic | 35.0% | |
TCTCAAAAGAAACCTGGAAT+TGG | - | chr8.2:38075428-38075447 | None:intergenic | 35.0% | |
TGAAATTGCTCAGAGATTAC+TGG | + | chr8.2:38073047-38073066 | MS.gene009143:CDS | 35.0% | |
TGAGAAGGTTCTCTTGAATA+TGG | + | chr8.2:38075158-38075177 | MS.gene009143:CDS | 35.0% | |
TGATACTGAGGTAATCTATG+TGG | + | chr8.2:38072987-38073006 | MS.gene009143:CDS | 35.0% | |
TGCTAAATGGTGTTTCAGTT+GGG | + | chr8.2:38072921-38072940 | MS.gene009143:CDS | 35.0% | |
TGCTGATACAATATGGTCAA+TGG | - | chr8.2:38074423-38074442 | None:intergenic | 35.0% | |
TGTGTTCATTGTTAGTGGAA+GGG | + | chr8.2:38074577-38074596 | MS.gene009143:CDS | 35.0% | |
TTAAGCACAGATATGACTTC+AGG | - | chr8.2:38074530-38074549 | None:intergenic | 35.0% | |
TTGAGAATTTCATCCCTTAC+TGG | - | chr8.2:38073417-38073436 | None:intergenic | 35.0% | |
TTGTGTTCATTGTTAGTGGA+AGG | + | chr8.2:38074576-38074595 | MS.gene009143:CDS | 35.0% | |
TTTACATCATGCAAACTGCT+GGG | + | chr8.2:38074623-38074642 | MS.gene009143:CDS | 35.0% | |
! | AATCTTTTAGACTTAGCTGG+TGG | + | chr8.2:38072727-38072746 | MS.gene009143:CDS | 35.0% |
! | ATCCCGATGATGATTTTGTT+TGG | + | chr8.2:38073274-38073293 | MS.gene009143:CDS | 35.0% |
! | ATGTTAGTTCTTCTGGATGT+CGG | + | chr8.2:38072839-38072858 | MS.gene009143:CDS | 35.0% |
! | CTTACTAGTTTCACTGTTAG+AGG | - | chr8.2:38075073-38075092 | None:intergenic | 35.0% |
! | GAATCAGATGTTAGTTCTTC+TGG | + | chr8.2:38072832-38072851 | MS.gene009143:CDS | 35.0% |
! | GCTAATCTTTTAGACTTAGC+TGG | + | chr8.2:38072724-38072743 | MS.gene009143:CDS | 35.0% |
! | GTCATGGATTTTCTCTTTAC+AGG | + | chr8.2:38075113-38075132 | MS.gene009143:intron | 35.0% |
! | TCCCATCATCTGAAATTTAC+CGG | + | chr8.2:38073385-38073404 | MS.gene009143:CDS | 35.0% |
! | TGATTTTGCCTACTTTCTTG+AGG | + | chr8.2:38073316-38073335 | MS.gene009143:CDS | 35.0% |
! | TTTAGCTTAGAGGATGTAGA+AGG | - | chr8.2:38073642-38073661 | None:intergenic | 35.0% |
!! | CAAGATAGAACTTTTTCTGC+AGG | - | chr8.2:38073110-38073129 | None:intergenic | 35.0% |
!! | CAATCTGAAATTTCTAGCTG+TGG | + | chr8.2:38073734-38073753 | MS.gene009143:CDS | 35.0% |
!! | CATTATACTAAAAGGTGCTG+GGG | + | chr8.2:38074338-38074357 | MS.gene009143:CDS | 35.0% |
!! | GGACGACATGGATATTTTTA+AGG | + | chr8.2:38073707-38073726 | MS.gene009143:CDS | 35.0% |
!! | TCCCGATGATGATTTTGTTT+GGG | + | chr8.2:38073275-38073294 | MS.gene009143:CDS | 35.0% |
!!! | CTGAATCTCTTTTAGCTTAG+AGG | - | chr8.2:38073652-38073671 | None:intergenic | 35.0% |
!!! | TTTGGGCTTTTGATTTGTTG+AGG | - | chr8.2:38075397-38075416 | None:intergenic | 35.0% |
ACAACTTCACCCTGCAAATT+TGG | - | chr8.2:38073780-38073799 | None:intergenic | 40.0% | |
ACTGGATGACTTTAATTGCG+TGG | + | chr8.2:38073065-38073084 | MS.gene009143:CDS | 40.0% | |
AGCATCTATCTCAACCTTGA+GGG | - | chr8.2:38073016-38073035 | None:intergenic | 40.0% | |
ATAACCCTTGGAAGACTTCT+TGG | - | chr8.2:38072778-38072797 | None:intergenic | 40.0% | |
ATAAGCACTCTTCTCGAAAC+GGG | - | chr8.2:38073949-38073968 | None:intergenic | 40.0% | |
ATCACCATGATCTGAGCATA+TGG | - | chr8.2:38073178-38073197 | None:intergenic | 40.0% | |
ATGGAATAGCGACTCTGAAT+GGG | + | chr8.2:38074764-38074783 | MS.gene009143:CDS | 40.0% | |
CAACTTCACCCTGCAAATTT+GGG | - | chr8.2:38073779-38073798 | None:intergenic | 40.0% | |
CTGCTAAATGGTGTTTCAGT+TGG | + | chr8.2:38072920-38072939 | MS.gene009143:CDS | 40.0% | |
GTACTCATGATGTGGCATAT+TGG | + | chr8.2:38074273-38074292 | MS.gene009143:CDS | 40.0% | |
GTCCGGTAAATTTCAGATGA+TGG | - | chr8.2:38073390-38073409 | None:intergenic | 40.0% | |
GTTTACATCATGCAAACTGC+TGG | + | chr8.2:38074622-38074641 | MS.gene009143:CDS | 40.0% | |
TAACCCTTGGAAGACTTCTT+GGG | - | chr8.2:38072777-38072796 | None:intergenic | 40.0% | |
TACCGTGCAAGCAAAAATCT+CGG | - | chr8.2:38075298-38075317 | None:intergenic | 40.0% | |
TAGCAAGAACACTTTCCAAG+TGG | - | chr8.2:38074965-38074984 | None:intergenic | 40.0% | |
TAGCATCTATCTCAACCTTG+AGG | - | chr8.2:38073017-38073036 | None:intergenic | 40.0% | |
TCAAGGTCAGAAATAATCCC+AGG | - | chr8.2:38072808-38072827 | None:intergenic | 40.0% | |
TCACCATGATCTGAGCATAT+GGG | - | chr8.2:38073177-38073196 | None:intergenic | 40.0% | |
TCGTATACAGAAGCAACTGA+TGG | + | chr8.2:38074846-38074865 | MS.gene009143:CDS | 40.0% | |
TCTTTACAGGGAGTAACCAA+AGG | + | chr8.2:38075126-38075145 | MS.gene009143:intron | 40.0% | |
TGAATTTAGCCCTCAGTATG+GGG | + | chr8.2:38074204-38074223 | MS.gene009143:CDS | 40.0% | |
TGATGTGCATTGGAGATGAT+AGG | + | chr8.2:38075208-38075227 | MS.gene009143:CDS | 40.0% | |
TGGAATTGGGCAAGATGTTT+GGG | - | chr8.2:38075414-38075433 | None:intergenic | 40.0% | |
TTGCATCGTCAATGCTGTAA+GGG | + | chr8.2:38073986-38074005 | MS.gene009143:CDS | 40.0% | |
! | ATATCTCTTTTAGCCTGCAG+CGG | - | chr8.2:38072895-38072914 | None:intergenic | 40.0% |
! | ATGATGGGAAAGGACTATGA+AGG | - | chr8.2:38073374-38073393 | None:intergenic | 40.0% |
! | CTTGTTGTGTCTGAGTTCAT+TGG | + | chr8.2:38074113-38074132 | MS.gene009143:CDS | 40.0% |
! | GGTAGCATATAATGGAAGAG+AGG | - | chr8.2:38073156-38073175 | None:intergenic | 40.0% |
! | TGGCCTCTTTTAACAATTGC+TGG | - | chr8.2:38074993-38075012 | None:intergenic | 40.0% |
! | TGGGTTTTCTTCTGATACTG+AGG | + | chr8.2:38072975-38072994 | MS.gene009143:CDS | 40.0% |
! | TGTTAGTTCTTCTGGATGTC+GGG | + | chr8.2:38072840-38072859 | MS.gene009143:CDS | 40.0% |
!! | AACTTTTTCTGCAGGTCATG+GGG | - | chr8.2:38073102-38073121 | None:intergenic | 40.0% |
!! | ACGCAGTTTTATGCAGGATT+TGG | + | chr8.2:38074298-38074317 | MS.gene009143:CDS | 40.0% |
!! | AGAACTTTTTCTGCAGGTCA+TGG | - | chr8.2:38073104-38073123 | None:intergenic | 40.0% |
!! | GAACTTTTTCTGCAGGTCAT+GGG | - | chr8.2:38073103-38073122 | None:intergenic | 40.0% |
!! | GGGATTATTTCTGACCTTGA+TGG | + | chr8.2:38072808-38072827 | MS.gene009143:CDS | 40.0% |
!! | TGAAGTCAAGGAAAGTGCTT+TGG | + | chr8.2:38074878-38074897 | MS.gene009143:CDS | 40.0% |
!! | TTTGATTTGTTGAGGTAGCG+AGG | - | chr8.2:38075389-38075408 | None:intergenic | 40.0% |
AACCCTTGGAAGACTTCTTG+GGG | - | chr8.2:38072776-38072795 | None:intergenic | 45.0% | |
AATCTATGTGGGTTCCCTCA+AGG | + | chr8.2:38072999-38073018 | MS.gene009143:CDS | 45.0% | |
ACAACAAGCATGCTTGTACG+AGG | - | chr8.2:38074101-38074120 | None:intergenic | 45.0% | |
ACAGATATGACTTCAGGGCT+GGG | - | chr8.2:38074524-38074543 | None:intergenic | 45.0% | |
ACAGGGAGTAACCAAAGGTT+TGG | + | chr8.2:38075131-38075150 | MS.gene009143:intron | 45.0% | |
ACCGTGCAAGCAAAAATCTC+GGG | - | chr8.2:38075297-38075316 | None:intergenic | 45.0% | |
AGCAACTGCATCTATATCCC+AGG | - | chr8.2:38074177-38074196 | None:intergenic | 45.0% | |
ATAAATCCTGCAAGGGGTTC+AGG | + | chr8.2:38073813-38073832 | MS.gene009143:CDS | 45.0% | |
ATCGTCAATGCTGTAAGGGA+TGG | + | chr8.2:38073990-38074009 | MS.gene009143:CDS | 45.0% | |
ATGCACATCACGAAATCTGG+TGG | - | chr8.2:38075198-38075217 | None:intergenic | 45.0% | |
ATGGTGTTTCAGTTGGGATG+AGG | + | chr8.2:38072927-38072946 | MS.gene009143:CDS | 45.0% | |
CAAACATCTTGCCCAATTCC+AGG | + | chr8.2:38075413-38075432 | MS.gene009143:CDS | 45.0% | |
CAAAGAATTGCTGGACCACT+TGG | + | chr8.2:38074947-38074966 | MS.gene009143:CDS | 45.0% | |
CAAGGGTTATGACTGTTCCT+GGG | + | chr8.2:38072788-38072807 | MS.gene009143:CDS | 45.0% | |
CAAGTGGTCCAGCAATTCTT+TGG | - | chr8.2:38074949-38074968 | None:intergenic | 45.0% | |
CAGCAGAACCCAAATTTGCA+GGG | + | chr8.2:38073768-38073787 | MS.gene009143:CDS | 45.0% | |
CCAATGCACATCACGAAATC+TGG | - | chr8.2:38075201-38075220 | None:intergenic | 45.0% | |
CCAGATTTCGTGATGTGCAT+TGG | + | chr8.2:38075198-38075217 | MS.gene009143:CDS | 45.0% | |
CTACCCATATGCTCAGATCA+TGG | + | chr8.2:38073171-38073190 | MS.gene009143:CDS | 45.0% | |
CTACCCATGTGAATTCCTAC+CGG | - | chr8.2:38073597-38073616 | None:intergenic | 45.0% | |
CTGGAATTGGGCAAGATGTT+TGG | - | chr8.2:38075415-38075434 | None:intergenic | 45.0% | |
CTGGACTATGAATCTAAGCG+CGG | + | chr8.2:38073522-38073541 | MS.gene009143:CDS | 45.0% | |
CTGTGCTCTCAAAAGAAACC+TGG | - | chr8.2:38075434-38075453 | None:intergenic | 45.0% | |
CTTCTCAGCTACCAAACCTT+TGG | - | chr8.2:38075145-38075164 | None:intergenic | 45.0% | |
GAATCTAAGCGCGGACATAT+AGG | + | chr8.2:38073531-38073550 | MS.gene009143:CDS | 45.0% | |
GAATTTAGCCCTCAGTATGG+GGG | + | chr8.2:38074205-38074224 | MS.gene009143:CDS | 45.0% | |
GACTGAGGAGGAAGAAACAA+AGG | - | chr8.2:38074687-38074706 | None:intergenic | 45.0% | |
GATGGAATAGCGACTCTGAA+TGG | + | chr8.2:38074763-38074782 | MS.gene009143:intron | 45.0% | |
GCAACTGCATCTATATCCCA+GGG | - | chr8.2:38074176-38074195 | None:intergenic | 45.0% | |
GGATCTTGATTGGAAACAGG+TGG | + | chr8.2:38074806-38074825 | MS.gene009143:CDS | 45.0% | |
GTTGCATCGTCAATGCTGTA+AGG | + | chr8.2:38073985-38074004 | MS.gene009143:CDS | 45.0% | |
GTTGTTCACCTTCTCTGAGT+GGG | + | chr8.2:38074135-38074154 | MS.gene009143:CDS | 45.0% | |
TAAATCCTGCAAGGGGTTCA+GGG | + | chr8.2:38073814-38073833 | MS.gene009143:CDS | 45.0% | |
TAAGCACTCTTCTCGAAACG+GGG | - | chr8.2:38073948-38073967 | None:intergenic | 45.0% | |
TCGTCAATGCTGTAAGGGAT+GGG | + | chr8.2:38073991-38074010 | MS.gene009143:CDS | 45.0% | |
TCTGTATACGACTGCATGAC+AGG | - | chr8.2:38074837-38074856 | None:intergenic | 45.0% | |
TCTTGCTGCAGTAGAATGCT+AGG | + | chr8.2:38073498-38073517 | MS.gene009143:CDS | 45.0% | |
TGAGATAGATGCTAGTGAGC+AGG | + | chr8.2:38073023-38073042 | MS.gene009143:CDS | 45.0% | |
TGCGGATCTTGATTGGAAAC+AGG | + | chr8.2:38074803-38074822 | MS.gene009143:CDS | 45.0% | |
TTACCGGACTTTGCCAGTAA+GGG | + | chr8.2:38073401-38073420 | MS.gene009143:CDS | 45.0% | |
TTGCCGGTAGGAATTCACAT+GGG | + | chr8.2:38073591-38073610 | MS.gene009143:CDS | 45.0% | |
TTGTTCACCTTCTCTGAGTG+GGG | + | chr8.2:38074136-38074155 | MS.gene009143:CDS | 45.0% | |
TTTACCGGACTTTGCCAGTA+AGG | + | chr8.2:38073400-38073419 | MS.gene009143:CDS | 45.0% | |
TTTGCCGGTAGGAATTCACA+TGG | + | chr8.2:38073590-38073609 | MS.gene009143:CDS | 45.0% | |
! | CAAAGGTTTGGTAGCTGAGA+AGG | + | chr8.2:38075143-38075162 | MS.gene009143:CDS | 45.0% |
! | CAAGATGCAGACCCTGATTT+TGG | + | chr8.2:38074912-38074931 | MS.gene009143:CDS | 45.0% |
! | GAGATTTTTGCTTGCACGGT+AGG | + | chr8.2:38075297-38075316 | MS.gene009143:CDS | 45.0% |
! | GAGCGGTCAATGATAATGAC+TGG | - | chr8.2:38073921-38073940 | None:intergenic | 45.0% |
! | GTTTTTGTAAGCAGCAGCTC+TGG | + | chr8.2:38073130-38073149 | MS.gene009143:CDS | 45.0% |
! | TATTCTTGGTGTGGACGACA+TGG | + | chr8.2:38073695-38073714 | MS.gene009143:CDS | 45.0% |
! | TCCCGAGATTTTTGCTTGCA+CGG | + | chr8.2:38075293-38075312 | MS.gene009143:CDS | 45.0% |
! | TTTTTGCTTGCACGGTAGGT+AGG | + | chr8.2:38075301-38075320 | MS.gene009143:CDS | 45.0% |
!! | ACTAAAAGGTGCTGGGGAAT+TGG | + | chr8.2:38074344-38074363 | MS.gene009143:CDS | 45.0% |
!! | CACGAAATCTGGTGGATTAC+CGG | - | chr8.2:38075190-38075209 | None:intergenic | 45.0% |
!! | TCAAGGAAAGTGCTTTGGTG+TGG | + | chr8.2:38074883-38074902 | MS.gene009143:CDS | 45.0% |
ACACCCCAAGAAGTCTTCCA+AGG | + | chr8.2:38072770-38072789 | MS.gene009143:CDS | 50.0% | |
AGATATGACTTCAGGGCTGG+GGG | - | chr8.2:38074522-38074541 | None:intergenic | 50.0% | |
ATCGCTTTGACCGAGTGCTT+TGG | + | chr8.2:38073196-38073215 | MS.gene009143:CDS | 50.0% | |
CACAGATATGACTTCAGGGC+TGG | - | chr8.2:38074525-38074544 | None:intergenic | 50.0% | |
CACCCCAAGAAGTCTTCCAA+GGG | + | chr8.2:38072771-38072790 | MS.gene009143:CDS | 50.0% | |
CAGATATGACTTCAGGGCTG+GGG | - | chr8.2:38074523-38074542 | None:intergenic | 50.0% | |
CATCCCTTACTGGCAAAGTC+CGG | - | chr8.2:38073407-38073426 | None:intergenic | 50.0% | |
CCAAGGGTTATGACTGTTCC+TGG | + | chr8.2:38072787-38072806 | MS.gene009143:CDS | 50.0% | |
CCAGGAACAGTCATAACCCT+TGG | - | chr8.2:38072790-38072809 | None:intergenic | 50.0% | |
CGGTAGGAATTCACATGGGT+AGG | + | chr8.2:38073595-38073614 | MS.gene009143:CDS | 50.0% | |
CTCAGAAACCCCCATACTGA+GGG | - | chr8.2:38074216-38074235 | None:intergenic | 50.0% | |
CTGCAGTAGAATGCTAGGTC+TGG | + | chr8.2:38073503-38073522 | MS.gene009143:CDS | 50.0% | |
CTGCCAAGCCAAAGAATTGC+TGG | + | chr8.2:38074938-38074957 | MS.gene009143:CDS | 50.0% | |
CTTGGCAGGAGCCAAAATCA+GGG | - | chr8.2:38074926-38074945 | None:intergenic | 50.0% | |
GCAAAAATCTCGGGAGCTGA+TGG | - | chr8.2:38075288-38075307 | None:intergenic | 50.0% | |
GCAAAGCTGGATGAAGCTGT+GGG | + | chr8.2:38074059-38074078 | MS.gene009143:CDS | 50.0% | |
GCAGCAGAACCCAAATTTGC+AGG | + | chr8.2:38073767-38073786 | MS.gene009143:CDS | 50.0% | |
GGTCCAGCAATTCTTTGGCT+TGG | - | chr8.2:38074944-38074963 | None:intergenic | 50.0% | |
GGTTGTTCACCTTCTCTGAG+TGG | + | chr8.2:38074134-38074153 | MS.gene009143:CDS | 50.0% | |
TCGGGAGCGGAAAATCATTG+TGG | + | chr8.2:38072858-38072877 | MS.gene009143:CDS | 50.0% | |
TCTCAGAAACCCCCATACTG+AGG | - | chr8.2:38074217-38074236 | None:intergenic | 50.0% | |
TGCAAAGCTGGATGAAGCTG+TGG | + | chr8.2:38074058-38074077 | MS.gene009143:CDS | 50.0% | |
! | CATAAGCCTGCCAAAGCACT+CGG | - | chr8.2:38073209-38073228 | None:intergenic | 50.0% |
! | TTCTTTTGGTGGGGTGACTG+AGG | - | chr8.2:38074702-38074721 | None:intergenic | 50.0% |
!! | CAGCAATTCTTTGGCTTGGC+AGG | - | chr8.2:38074940-38074959 | None:intergenic | 50.0% |
!! | TTGGGCACGCAGTTTTATGC+AGG | + | chr8.2:38074292-38074311 | MS.gene009143:CDS | 50.0% |
ATCCCAGGGATTGACCCTGA+TGG | - | chr8.2:38074162-38074181 | None:intergenic | 55.0% | |
CAGACAGGGAACTGCAAAGC+TGG | + | chr8.2:38074046-38074065 | MS.gene009143:CDS | 55.0% | |
CAGGTCATGGGGTAGAAAGG+TGG | - | chr8.2:38073091-38073110 | None:intergenic | 55.0% | |
CTGCAGGTCATGGGGTAGAA+AGG | - | chr8.2:38073094-38073113 | None:intergenic | 55.0% | |
CTGGGACTTGCAGCTGAACA+TGG | + | chr8.2:38074641-38074660 | MS.gene009143:CDS | 55.0% | |
CTTTGACCGAGTGCTTTGGC+AGG | + | chr8.2:38073200-38073219 | MS.gene009143:CDS | 55.0% | |
GCTTGGCAGGAGCCAAAATC+AGG | - | chr8.2:38074927-38074946 | None:intergenic | 55.0% | |
GGAAGACTTCTTGGGGTGTG+AGG | - | chr8.2:38072769-38072788 | None:intergenic | 55.0% | |
GGGTTCAGGGAAGGATGTTC+AGG | + | chr8.2:38073827-38073846 | MS.gene009143:CDS | 55.0% | |
GGTAGGTAGGAAGCCTAGCA+AGG | + | chr8.2:38075314-38075333 | MS.gene009143:CDS | 55.0% | |
GTTCTTCTGGATGTCGGGAG+CGG | + | chr8.2:38072845-38072864 | MS.gene009143:CDS | 55.0% | |
TCTCGAAACGGGGAACAGAG+CGG | - | chr8.2:38073938-38073957 | None:intergenic | 55.0% | |
TTCTCTGAGTGGGGCCATCA+GGG | + | chr8.2:38074145-38074164 | MS.gene009143:CDS | 55.0% | |
! | TCGGGAGCTGATGGTAACGA+CGG | - | chr8.2:38075279-38075298 | None:intergenic | 55.0% |
! | TGGGGAATTGGTCTGGGCTT+GGG | + | chr8.2:38074356-38074375 | MS.gene009143:CDS | 55.0% |
! | TTTTGGTGGGGTGACTGAGG+AGG | - | chr8.2:38074699-38074718 | None:intergenic | 55.0% |
!! | AAGGTGCTGGGGAATTGGTC+TGG | + | chr8.2:38074349-38074368 | MS.gene009143:CDS | 55.0% |
!! | AGGTGCTGGGGAATTGGTCT+GGG | + | chr8.2:38074350-38074369 | MS.gene009143:CDS | 55.0% |
CTGATGGCCCCACTCAGAGA+AGG | - | chr8.2:38074146-38074165 | None:intergenic | 60.0% | |
CTTCTCTGAGTGGGGCCATC+AGG | + | chr8.2:38074144-38074163 | MS.gene009143:CDS | 60.0% | |
GGCAAACATGTTGCCGCTGC+AGG | + | chr8.2:38072879-38072898 | MS.gene009143:CDS | 60.0% | |
GGCCATCAGGGTCAATCCCT+GGG | + | chr8.2:38074157-38074176 | MS.gene009143:CDS | 60.0% | |
TCCTGCAAGGGGTTCAGGGA+AGG | + | chr8.2:38073818-38073837 | MS.gene009143:CDS | 60.0% | |
TCCTTCCCTGAACCCCTTGC+AGG | - | chr8.2:38073822-38073841 | None:intergenic | 60.0% | |
! | CGGGAGCTGATGGTAACGAC+GGG | - | chr8.2:38075278-38075297 | None:intergenic | 60.0% |
! | CTGGGGAATTGGTCTGGGCT+TGG | + | chr8.2:38074355-38074374 | MS.gene009143:CDS | 60.0% |
! | GGGGAATTGGTCTGGGCTTG+GGG | + | chr8.2:38074357-38074376 | MS.gene009143:CDS | 60.0% |
GGGCCATCAGGGTCAATCCC+TGG | + | chr8.2:38074156-38074175 | MS.gene009143:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 38072706 | 38075461 | 38072706 | ID=MS.gene009143 |
chr8.2 | mRNA | 38072706 | 38075461 | 38072706 | ID=MS.gene009143.t1;Parent=MS.gene009143 |
chr8.2 | exon | 38072706 | 38074675 | 38072706 | ID=MS.gene009143.t1.exon1;Parent=MS.gene009143.t1 |
chr8.2 | CDS | 38072706 | 38074675 | 38072706 | ID=cds.MS.gene009143.t1;Parent=MS.gene009143.t1 |
chr8.2 | exon | 38074764 | 38075037 | 38074764 | ID=MS.gene009143.t1.exon2;Parent=MS.gene009143.t1 |
chr8.2 | CDS | 38074764 | 38075037 | 38074764 | ID=cds.MS.gene009143.t1;Parent=MS.gene009143.t1 |
chr8.2 | exon | 38075135 | 38075461 | 38075135 | ID=MS.gene009143.t1.exon3;Parent=MS.gene009143.t1 |
chr8.2 | CDS | 38075135 | 38075461 | 38075135 | ID=cds.MS.gene009143.t1;Parent=MS.gene009143.t1 |
Gene Sequence |
Protein sequence |