AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012608

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012608.t1 MTR_4g131750 97.403 385 10 0 19 403 96 480 0.0 780
MS.gene012608.t1 MTR_3g083690 31.714 391 203 14 7 365 139 497 1.93e-33 132
MS.gene012608.t1 MTR_2g063080 26.932 427 229 10 23 394 127 525 2.21e-31 125
MS.gene012608.t1 MTR_1g054630 30.052 386 219 12 5 365 146 505 6.44e-30 122
MS.gene012608.t1 MTR_4g105100 28.969 359 220 9 13 365 210 539 3.29e-29 120
MS.gene012608.t1 MTR_2g100230 28.052 385 230 11 13 386 104 452 3.86e-29 119
MS.gene012608.t1 MTR_2g039960 27.034 381 231 12 23 394 59 401 9.90e-29 116
MS.gene012608.t1 MTR_4g114120 30.319 376 198 14 19 365 154 494 1.57e-28 118
MS.gene012608.t1 MTR_7g056830 28.809 361 224 11 20 377 25 355 4.89e-28 115
MS.gene012608.t1 MTR_6g082080 28.532 361 225 11 20 377 25 355 1.58e-27 113
MS.gene012608.t1 MTR_3g467550 31.111 360 197 15 24 365 136 462 1.59e-27 114
MS.gene012608.t1 MTR_3g467550 31.111 360 197 15 24 365 105 431 1.78e-27 114
MS.gene012608.t1 MTR_2g032630 29.268 369 211 8 22 377 513 844 3.99e-27 114
MS.gene012608.t1 MTR_2g099620 25.789 380 233 12 23 392 59 399 8.18e-27 111
MS.gene012608.t1 MTR_2g099620 25.789 380 233 12 23 392 43 383 1.15e-26 110
MS.gene012608.t1 MTR_1g026830 26.932 427 258 14 1 402 135 532 1.65e-26 112
MS.gene012608.t1 MTR_6g039840 27.838 370 212 14 19 365 124 461 2.17e-26 112
MS.gene012608.t1 MTR_5g027840 29.396 364 198 14 23 365 120 445 3.43e-26 110
MS.gene012608.t1 MTR_1g095810 26.698 427 259 14 1 402 133 530 3.64e-26 110
MS.gene012608.t1 MTR_4g125970 26.247 381 234 12 23 394 59 401 6.73e-26 108
MS.gene012608.t1 MTR_4g125970 25.798 376 242 10 23 394 76 418 7.25e-26 108
MS.gene012608.t1 MTR_4g112340 27.273 352 222 8 21 365 113 437 9.82e-26 109
MS.gene012608.t1 MTR_4g079320 28.125 352 210 12 23 365 37 354 1.73e-25 109
MS.gene012608.t1 MTR_4g059460 26.683 416 218 13 18 365 58 454 3.31e-25 108
MS.gene012608.t1 MTR_8g018400 25.594 379 235 12 23 392 59 399 3.87e-25 106
MS.gene012608.t1 MTR_7g100820 26.558 369 210 11 13 365 142 465 4.28e-25 107
MS.gene012608.t1 MTR_6g005550 29.032 372 208 11 19 374 179 510 9.83e-25 107
MS.gene012608.t1 MTR_8g027770 28.108 370 212 14 19 366 215 552 3.12e-24 105
MS.gene012608.t1 MTR_7g076820 25.067 375 245 10 21 394 166 505 3.14e-24 104
MS.gene012608.t1 MTR_2g043360 26.442 416 219 13 18 365 55 451 9.29e-24 103
MS.gene012608.t1 MTR_2g055850 27.988 343 216 10 28 365 114 430 1.84e-23 102
MS.gene012608.t1 MTR_6g005320 26.478 389 221 12 19 378 263 615 3.48e-23 102
MS.gene012608.t1 MTR_2g438110 25.348 359 211 11 21 365 50 365 3.85e-23 100
MS.gene012608.t1 MTR_4g134170 26.478 389 223 12 19 378 301 655 6.89e-23 101
MS.gene012608.t1 MTR_3g107420 26.031 388 233 12 23 395 65 413 6.89e-23 100
MS.gene012608.t1 MTR_2g007000 27.110 391 216 13 19 386 518 862 9.28e-23 101
MS.gene012608.t1 MTR_7g109720 28.954 373 223 14 23 386 250 589 2.70e-22 99.8
MS.gene012608.t1 MTR_2g041140 28.418 373 221 14 20 381 156 493 4.41e-22 99.0
MS.gene012608.t1 MTR_7g076830 24.267 375 248 10 21 394 159 498 5.35e-22 98.2
MS.gene012608.t1 MTR_7g076800 24.267 375 248 10 21 394 157 496 7.48e-22 97.8
MS.gene012608.t1 MTR_5g092560 25.066 379 242 12 1 365 66 416 9.42e-22 98.2
MS.gene012608.t1 MTR_2g066050 28.169 355 213 12 20 365 68 389 9.94e-22 97.4
MS.gene012608.t1 MTR_3g049990 28.852 357 209 14 20 365 167 489 1.13e-21 97.8
MS.gene012608.t1 MTR_4g010565 23.529 391 247 9 23 401 142 492 1.20e-21 97.1
MS.gene012608.t1 MTR_1g012420 25.258 388 236 12 23 395 65 413 1.21e-21 96.7
MS.gene012608.t1 MTR_7g057250 25.000 428 230 13 19 379 177 580 1.38e-21 97.4
MS.gene012608.t1 MTR_3g467550 29.769 346 192 15 24 351 136 448 3.14e-21 95.5
MS.gene012608.t1 MTR_8g027775 26.757 370 217 15 19 366 116 453 4.13e-21 95.9
MS.gene012608.t1 MTR_3g449250 27.901 362 224 10 10 365 96 426 1.53e-20 94.0
MS.gene012608.t1 MTR_3g449250 28.177 362 223 10 10 365 96 426 1.72e-20 94.0
MS.gene012608.t1 MTR_3g071620 24.798 371 249 7 8 365 20 373 1.90e-20 94.0
MS.gene012608.t1 MTR_8g097000 25.543 368 216 14 23 366 306 639 1.99e-20 94.0
MS.gene012608.t1 MTR_4g105100 27.879 330 203 9 13 336 210 510 2.02e-20 93.6
MS.gene012608.t1 MTR_5g090120 29.282 362 202 12 19 365 95 417 4.59e-20 92.8
MS.gene012608.t1 MTR_4g068990 25.532 376 239 13 3 365 68 415 4.62e-20 92.8
MS.gene012608.t1 MTR_8g027780 25.815 368 221 13 19 365 120 456 1.03e-19 91.7
MS.gene012608.t1 MTR_3g118120 25.269 372 215 10 27 365 154 495 5.51e-19 89.4
MS.gene012608.t1 MTR_6g033070 25.352 355 228 9 19 365 154 479 1.59e-18 87.8
MS.gene012608.t1 MTR_1g083130 23.232 396 234 10 27 377 48 418 4.77e-17 83.6
MS.gene012608.t1 MTR_6g056080 26.050 357 218 12 29 371 127 451 4.85e-17 83.6
MS.gene012608.t1 MTR_6g039840 27.687 307 174 13 74 365 12 285 1.52e-16 81.6
MS.gene012608.t1 MTR_1g061970 27.157 394 219 19 4 365 81 438 2.37e-16 81.3
MS.gene012608.t1 MTR_8g027780 25.217 345 206 13 19 342 120 433 7.73e-15 76.3
MS.gene012608.t1 MTR_8g018370 23.373 338 202 11 34 366 2 287 1.28e-14 74.7
MS.gene012608.t1 MTR_1g102410 25.000 384 224 11 19 371 58 408 1.78e-14 75.5
MS.gene012608.t1 MTR_4g459350 28.426 197 120 5 18 205 55 239 3.22e-13 70.1
MS.gene012608.t1 MTR_8g062720 27.322 183 116 6 189 365 356 527 3.51e-12 68.6
MS.gene012608.t1 MTR_0915s0010 26.111 180 121 4 21 200 5 172 5.27e-12 66.2
MS.gene012608.t1 MTR_3g107420 26.776 183 123 3 23 204 65 237 3.69e-11 64.3
MS.gene012608.t1 MTR_4g077370 30.270 185 110 5 20 199 265 435 3.71e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012608.t1 AT5G19210 69.271 384 115 1 19 402 91 471 0.0 578
MS.gene012608.t1 AT5G19210 68.770 317 96 1 86 402 1 314 1.52e-167 472
MS.gene012608.t1 AT5G19210 68.770 317 96 1 86 402 1 314 1.52e-167 472
MS.gene012608.t1 AT1G12770 26.638 458 249 16 4 402 112 541 4.52e-33 130
MS.gene012608.t1 AT1G12770 26.638 458 249 16 4 402 112 541 4.52e-33 130
MS.gene012608.t1 AT3G58510 30.789 380 210 10 13 371 160 507 8.44e-32 127
MS.gene012608.t1 AT3G58510 30.789 380 210 10 13 371 160 507 8.44e-32 127
MS.gene012608.t1 AT3G58510 30.789 380 210 10 13 371 160 507 8.44e-32 127
MS.gene012608.t1 AT3G58570 31.536 371 205 11 15 365 157 498 7.02e-31 125
MS.gene012608.t1 AT2G42520 31.481 378 196 13 15 365 170 511 2.65e-30 123
MS.gene012608.t1 AT2G42520 31.481 378 196 13 15 365 170 511 2.65e-30 123
MS.gene012608.t1 AT2G42520 31.481 378 196 13 15 365 170 511 2.65e-30 123
MS.gene012608.t1 AT5G63120 29.006 362 219 11 13 365 171 503 4.91e-29 119
MS.gene012608.t1 AT5G60990 29.839 372 216 13 20 377 25 365 5.72e-29 117
MS.gene012608.t1 AT1G20920 30.105 382 216 14 19 386 206 550 8.62e-29 119
MS.gene012608.t1 AT1G72730 27.179 390 233 14 23 403 60 407 2.16e-28 115
MS.gene012608.t1 AT1G20920 30.105 382 216 14 19 386 544 888 3.67e-28 117
MS.gene012608.t1 AT1G20920 30.105 382 216 14 19 386 544 888 3.67e-28 117
MS.gene012608.t1 AT1G20920 30.105 382 216 14 19 386 544 888 3.67e-28 117
MS.gene012608.t1 AT1G20920 30.105 382 216 14 19 386 544 888 3.67e-28 117
MS.gene012608.t1 AT1G20920 30.105 382 216 14 19 386 544 888 3.67e-28 117
MS.gene012608.t1 AT1G20920 30.105 382 216 14 19 386 544 888 3.67e-28 117
MS.gene012608.t1 AT4G33370 27.594 424 255 15 2 401 87 482 8.10e-28 115
MS.gene012608.t1 AT1G77030 27.676 383 234 14 4 379 30 376 2.61e-27 114
MS.gene012608.t1 AT1G55150 27.822 381 236 11 13 386 133 481 3.29e-27 113
MS.gene012608.t1 AT3G13920 26.154 390 237 13 23 403 53 400 3.90e-27 112
MS.gene012608.t1 AT5G65900 30.352 369 219 13 4 365 156 493 4.18e-27 114
MS.gene012608.t1 AT1G55150 27.822 381 236 11 13 386 108 456 4.71e-27 112
MS.gene012608.t1 AT3G13920 26.221 389 238 13 23 403 48 395 4.96e-27 111
MS.gene012608.t1 AT3G13920 26.154 390 237 13 23 403 58 405 5.09e-27 111
MS.gene012608.t1 AT1G54270 26.598 391 234 13 23 403 53 400 7.16e-27 111
MS.gene012608.t1 AT3G01540 30.833 360 193 11 22 365 176 495 7.33e-27 113
MS.gene012608.t1 AT3G01540 30.833 360 193 11 22 365 176 495 7.33e-27 113
MS.gene012608.t1 AT3G01540 30.833 360 193 11 22 365 176 495 7.33e-27 113
MS.gene012608.t1 AT3G01540 30.833 360 193 11 22 365 176 495 7.73e-27 113
MS.gene012608.t1 AT1G54270 26.598 391 234 13 23 403 58 405 8.46e-27 111
MS.gene012608.t1 AT3G09720 25.833 360 226 11 12 365 149 473 2.08e-26 111
MS.gene012608.t1 AT3G09720 25.833 360 226 11 12 365 149 473 2.08e-26 111
MS.gene012608.t1 AT3G13920 25.474 369 240 9 23 389 62 397 3.33e-26 109
MS.gene012608.t1 AT3G13920 25.936 374 232 11 23 389 58 393 4.56e-26 109
MS.gene012608.t1 AT5G51280 26.772 381 238 11 1 365 135 490 1.02e-25 109
MS.gene012608.t1 AT4G00660 26.913 379 233 10 21 394 148 487 1.37e-25 108
MS.gene012608.t1 AT4G00660 26.913 379 233 10 21 394 148 487 1.37e-25 108
MS.gene012608.t1 AT3G18600 27.019 359 221 10 16 365 101 427 1.83e-25 108
MS.gene012608.t1 AT5G14610 28.652 356 218 9 16 365 42 367 4.07e-25 107
MS.gene012608.t1 AT5G14610 28.652 356 218 9 16 365 42 367 4.07e-25 107
MS.gene012608.t1 AT3G06480 27.624 362 220 8 22 374 453 781 8.55e-25 107
MS.gene012608.t1 AT5G63630 27.174 368 218 13 19 366 69 406 8.75e-25 106
MS.gene012608.t1 AT1G16280 29.412 357 206 12 20 365 74 395 1.08e-24 105
MS.gene012608.t1 AT3G61240 25.260 384 248 10 21 403 141 486 1.59e-24 105
MS.gene012608.t1 AT3G61240 25.260 384 248 10 21 403 141 486 1.59e-24 105
MS.gene012608.t1 AT5G14610 28.877 374 217 12 8 365 158 498 2.28e-24 105
MS.gene012608.t1 AT3G19760 26.111 360 207 12 21 365 52 367 2.28e-24 104
MS.gene012608.t1 AT2G40700 27.208 419 214 16 18 365 45 443 2.31e-24 105
MS.gene012608.t1 AT5G14610 28.877 374 217 12 8 365 158 498 2.39e-24 105
MS.gene012608.t1 AT5G14610 28.852 357 212 10 18 365 243 566 2.43e-24 105
MS.gene012608.t1 AT5G14610 28.877 374 217 12 8 365 166 506 2.86e-24 105
MS.gene012608.t1 AT5G63630 27.174 368 218 13 19 366 263 600 3.14e-24 105
MS.gene012608.t1 AT4G09730 27.273 396 238 14 19 395 127 491 4.02e-24 105
MS.gene012608.t1 AT1G71370 26.178 382 229 13 3 365 15 362 2.09e-23 102
MS.gene012608.t1 AT5G05450 24.872 390 222 12 8 365 21 371 4.82e-23 101
MS.gene012608.t1 AT2G45810 25.195 385 247 10 21 403 171 516 4.93e-23 101
MS.gene012608.t1 AT5G11170 25.831 391 238 12 23 401 65 415 1.34e-22 99.4
MS.gene012608.t1 AT5G11200 25.831 391 238 12 23 401 65 415 1.34e-22 99.4
MS.gene012608.t1 AT2G33730 27.179 390 219 12 19 378 328 682 1.49e-22 100
MS.gene012608.t1 AT1G51380 26.420 352 216 10 21 365 39 354 2.71e-22 98.2
MS.gene012608.t1 AT5G11200 25.180 417 249 14 23 401 65 456 1.66e-21 96.7
MS.gene012608.t1 AT2G47330 27.614 373 226 14 24 386 248 586 2.54e-21 96.7
MS.gene012608.t1 AT3G09620 27.820 399 207 16 2 386 395 726 3.95e-21 96.3
MS.gene012608.t1 AT3G09620 27.820 399 207 16 2 386 396 727 3.99e-21 96.3
MS.gene012608.t1 AT5G11200 25.234 428 253 14 23 401 65 474 4.90e-21 95.1
MS.gene012608.t1 AT5G08620 27.249 389 221 16 3 366 81 432 5.57e-21 95.5
MS.gene012608.t1 AT5G54910 24.510 408 235 13 3 386 72 430 1.16e-20 94.7
MS.gene012608.t1 AT5G08610 27.202 386 225 15 3 366 383 734 2.35e-20 94.0
MS.gene012608.t1 AT3G02065 26.536 358 221 11 19 365 125 451 1.20e-19 91.3
MS.gene012608.t1 AT3G02065 26.536 358 221 11 19 365 125 451 1.20e-19 91.3
MS.gene012608.t1 AT4G16630 29.248 359 205 14 20 365 183 505 1.51e-19 91.3
MS.gene012608.t1 AT5G63120 27.628 333 203 11 13 336 171 474 2.54e-19 90.1
MS.gene012608.t1 AT5G63120 27.628 333 203 11 13 336 171 474 2.54e-19 90.1
MS.gene012608.t1 AT5G63120 27.628 333 203 11 13 336 171 474 2.54e-19 90.1
MS.gene012608.t1 AT5G63120 27.628 333 203 11 13 336 171 474 3.22e-19 89.7
MS.gene012608.t1 AT3G22330 26.554 354 202 10 29 365 129 441 1.26e-18 88.6
MS.gene012608.t1 AT3G16840 24.105 419 226 14 27 378 213 606 1.37e-18 88.6
MS.gene012608.t1 AT3G16840 24.105 419 226 14 27 378 214 607 1.46e-18 88.6
MS.gene012608.t1 AT5G11170 25.606 371 224 12 43 401 2 332 3.13e-18 85.5
MS.gene012608.t1 AT2G07750 24.205 409 238 15 23 403 394 758 3.58e-18 87.4
MS.gene012608.t1 AT5G26742 25.722 381 235 11 19 386 117 462 4.82e-18 86.7
MS.gene012608.t1 AT5G26742 25.722 381 235 11 19 386 117 462 4.82e-18 86.7
MS.gene012608.t1 AT1G63250 24.205 409 238 15 23 403 347 711 5.99e-18 86.7
MS.gene012608.t1 AT5G14610 27.697 343 203 11 16 346 178 487 2.87e-17 84.0
MS.gene012608.t1 AT1G71280 23.944 355 193 11 3 340 16 310 6.15e-17 81.6
MS.gene012608.t1 AT5G62190 28.142 366 207 14 29 375 121 449 6.84e-17 83.2
MS.gene012608.t1 AT3G06480 26.687 326 197 8 22 338 453 745 7.15e-17 83.2
MS.gene012608.t1 AT3G06980 25.067 371 232 12 19 365 389 737 8.19e-17 83.2
MS.gene012608.t1 AT1G71280 23.955 359 196 11 3 344 16 314 9.49e-17 82.4
MS.gene012608.t1 AT1G28180 26.289 388 223 12 34 403 3 345 1.58e-16 80.9
MS.gene012608.t1 AT5G26742 25.905 359 218 11 41 386 46 369 4.76e-16 80.5
MS.gene012608.t1 AT4G34910 26.396 394 210 17 23 365 65 429 1.26e-14 76.3
MS.gene012608.t1 AT3G02065 25.507 345 213 11 33 365 2 314 2.83e-14 74.3
MS.gene012608.t1 AT3G53110 26.562 384 226 17 3 365 92 440 1.66e-13 72.4
MS.gene012608.t1 AT1G51380 25.806 248 162 7 21 265 39 267 2.67e-11 64.3

Find 88 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATATGTGAGTCATTTC+TGG 0.194191 8.1:+2194961 None:intergenic
GATGAGGCAAAGCTTGTTTC+TGG 0.205005 8.1:+2199577 None:intergenic
TTTCTTATCTAGACAGGTTC+TGG 0.245869 8.1:-2198742 MS.gene012608:intron
AAGGCACAAGAGTTGGTTTA+AGG 0.253619 8.1:-2198392 MS.gene012608:intron
AAAGTTGTCTTTCAAGCATT+TGG 0.274712 8.1:+2197569 None:intergenic
CCACCGGACTAACGTGAATA+TGG 0.305745 8.1:+2196769 None:intergenic
CGGATTGTATCAAGGATAAC+AGG 0.308643 8.1:+2196470 None:intergenic
TTTCTTCAATTCAGGAGGTT+AGG 0.380425 8.1:-2195041 MS.gene012608:intron
ACGAAGCTGTGCAGCAGAAA+TGG 0.398801 8.1:-2196910 MS.gene012608:CDS
TGCTCGATGAAGATAATCTA+TGG 0.405528 8.1:+2194918 None:intergenic
ACTGTTGCAACTACTATTGC+TGG 0.408826 8.1:+2197604 None:intergenic
AGTACAATTCACATTAGAAA+AGG 0.409722 8.1:+2194876 None:intergenic
TGCTCCCCTTCAACTCCTGT+TGG 0.415557 8.1:+2198460 None:intergenic
ACCATCATGGCTCTGTTAGA+TGG 0.426508 8.1:-2198427 MS.gene012608:CDS
GAGAGAACTCACTTGCTTTG+AGG 0.428528 8.1:+2197021 None:intergenic
CAATCCGATGCTCCCAAGTC+TGG 0.430922 8.1:-2196454 MS.gene012608:CDS
AATATGAGGTCAAAATCTTC+CGG 0.442699 8.1:+2196999 None:intergenic
TACCAAGGTTGCTAGGATAC+TGG 0.446818 8.1:-2198491 MS.gene012608:CDS
GCAAAGCCAACAGGAGTTGA+AGG 0.454965 8.1:-2198466 MS.gene012608:CDS
CATTATATTTGTTAGTGAGC+AGG 0.459913 8.1:-2196431 MS.gene012608:intron
ATACTGGCGGCAAAGCCAAC+AGG 0.471835 8.1:-2198475 MS.gene012608:CDS
CATTGAGAAGGCACAAGAGT+TGG 0.474974 8.1:-2198399 MS.gene012608:CDS
TTACTTGCATGCCAAGTTCA+CGG 0.485189 8.1:+2198635 None:intergenic
TTCTTATCTAGACAGGTTCT+GGG 0.487069 8.1:-2198741 MS.gene012608:intron
GGTTTCAGGATGGAAGAGGT+TGG 0.487259 8.1:-2199621 MS.gene012608:intron
TTGGTGCCCACCCGTGAACT+TGG 0.487776 8.1:-2198646 MS.gene012608:CDS
TACTTGCATGCCAAGTTCAC+GGG 0.491088 8.1:+2198636 None:intergenic
GCTTGGAACCTTGCGGGTGT+TGG 0.493949 8.1:-2197542 MS.gene012608:CDS
GTACAATTCACATTAGAAAA+GGG 0.494149 8.1:+2194877 None:intergenic
AACAAATATAATGCCAGACT+TGG 0.496013 8.1:+2196441 None:intergenic
ATAGATTATCTTCATCGAGC+AGG 0.505786 8.1:-2194916 MS.gene012608:CDS
ATTAGAAAAGGGTTTCCTAC+AGG 0.506907 8.1:+2194888 None:intergenic
GCTTGTTTCTGGACCGGTGT+AGG 0.508652 8.1:+2199588 None:intergenic
GGCAAAGCTTGTTTCTGGAC+CGG 0.513600 8.1:+2199582 None:intergenic
TCCATCTAACAGAGCCATGA+TGG 0.515808 8.1:+2198426 None:intergenic
GATCCATATTCACGTTAGTC+CGG 0.519341 8.1:-2196772 MS.gene012608:CDS
TCATGTCATCTTCGAGGAGG+AGG 0.523824 8.1:+2195656 None:intergenic
CGAGACGGCATGGGCTCCAC+CGG 0.526533 8.1:+2196753 None:intergenic
ATGAGATAGACGAGACGGCA+TGG 0.531411 8.1:+2196743 None:intergenic
TGAAATTCATGTCATCTTCG+AGG 0.542019 8.1:+2195650 None:intergenic
CGCCAGTATCCTAGCAACCT+TGG 0.544294 8.1:+2198489 None:intergenic
CAAAGCAAGTGAGTTCTCTC+CGG 0.545982 8.1:-2197018 MS.gene012608:CDS
CACCAGCATTACAGTCTCGC+AGG 0.547011 8.1:-2194851 MS.gene012608:CDS
AATGCCAGACTTGGGAGCAT+CGG 0.548051 8.1:+2196450 None:intergenic
TTCACGAGCAGCTTCTCTGT+TGG 0.548108 8.1:-2195626 MS.gene012608:intron
TGACTGCATACTTCATGCTC+AGG 0.549288 8.1:-2199541 MS.gene012608:intron
ATATGGTTTCAGGATGGAAG+AGG 0.550760 8.1:-2199625 MS.gene012608:intron
CTCCTGCGAGACTGTAATGC+TGG 0.551261 8.1:+2194849 None:intergenic
ACAAGGTTACCAAGGTTGCT+AGG 0.555693 8.1:-2198498 MS.gene012608:intron
GGGAGCATCGGATTGTATCA+AGG 0.557881 8.1:+2196462 None:intergenic
AAAGTCAATCACAAGGGACG+TGG 0.566234 8.1:+2195711 None:intergenic
GCGGGTGTTGGTTGTTGATG+AGG 0.566555 8.1:-2197530 MS.gene012608:intron
TGAGATAGACGAGACGGCAT+GGG 0.566865 8.1:+2196744 None:intergenic
ATTCAGGAGGTTAGGAAAGG+TGG 0.567056 8.1:-2195033 MS.gene012608:intron
TCAATTCAGGAGGTTAGGAA+AGG 0.571959 8.1:-2195036 MS.gene012608:intron
GTGCTGTGGTATAGATGCAC+TGG 0.576066 8.1:+2196946 None:intergenic
TAGATTATCTTCATCGAGCA+GGG 0.578270 8.1:-2194915 MS.gene012608:CDS
TTGCATGCCAAGTTCACGGG+TGG 0.578362 8.1:+2198639 None:intergenic
CAAAGCCAACAGGAGTTGAA+GGG 0.578993 8.1:-2198465 MS.gene012608:CDS
TGTGCAGCAGAAATGGACTA+AGG 0.582058 8.1:-2196903 MS.gene012608:intron
GCAAAGATCATGTACCATCA+TGG 0.597463 8.1:-2198440 MS.gene012608:CDS
ACAAATATAATGCCAGACTT+GGG 0.600019 8.1:+2196442 None:intergenic
TCAATCACAAGGGACGTGGA+TGG 0.602588 8.1:+2195715 None:intergenic
CCATATTCACGTTAGTCCGG+TGG 0.603339 8.1:-2196769 MS.gene012608:CDS
ATTTAATGACAAGGTTACCA+AGG 0.606643 8.1:-2198506 MS.gene012608:intron
GAGCATGAAGTATGCAGTCA+CGG 0.611830 8.1:+2199544 None:intergenic
GTTATTACAAGACGAATATG+AGG 0.618006 8.1:+2196985 None:intergenic
CAGGAGGTTAGGAAAGGTGG+CGG 0.618785 8.1:-2195030 MS.gene012608:CDS
CATAATTGTCTGAGAGTGGT+GGG 0.620433 8.1:+2199781 None:intergenic
GCATTACAGTCTCGCAGGAG+CGG 0.623481 8.1:-2194846 MS.gene012608:CDS
GCAACAGATGTAGCAGCTAG+AGG 0.629003 8.1:-2194994 MS.gene012608:CDS
TGGATATGTCATGCCTACAC+CGG 0.638270 8.1:-2199601 MS.gene012608:CDS
ATCGAGCAGGGAGGACCTGT+AGG 0.641289 8.1:-2194903 MS.gene012608:CDS
AGAGATATGAAAATGAGTTG+AGG 0.645209 8.1:-2194813 MS.gene012608:CDS
TTAAGAAATCGATTGTGCTG+TGG 0.645279 8.1:+2196932 None:intergenic
AAAGCCAACAGGAGTTGAAG+GGG 0.645317 8.1:-2198464 MS.gene012608:CDS
ATCAACAACCAACACCCGCA+AGG 0.646378 8.1:+2197534 None:intergenic
TGCATGCCAAGTTCACGGGT+GGG 0.647137 8.1:+2198640 None:intergenic
ACATAATTGTCTGAGAGTGG+TGG 0.647192 8.1:+2199780 None:intergenic
AATCTATGAGATAGACGAGA+CGG 0.648321 8.1:+2196738 None:intergenic
TTGACATAATTGTCTGAGAG+TGG 0.663852 8.1:+2199777 None:intergenic
ATCATGGCTCTGTTAGATGG+AGG 0.664674 8.1:-2198424 MS.gene012608:CDS
GTTGCAACTACTATTGCTGG+AGG 0.676385 8.1:+2197607 None:intergenic
TAGATGGAGGAACATTGAGA+AGG 0.676895 8.1:-2198411 MS.gene012608:CDS
AATTCATGTCATCTTCGAGG+AGG 0.678357 8.1:+2195653 None:intergenic
GGATTGTATCAAGGATAACA+GGG 0.686516 8.1:+2196471 None:intergenic
CAAGGTTGCTAGGATACTGG+CGG 0.692619 8.1:-2198488 MS.gene012608:CDS
ATTATCTTCATCGAGCAGGG+AGG 0.739574 8.1:-2194912 MS.gene012608:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATATTTAATGACA+AGG - chr8.1:2196072-2196091 MS.gene012608:intron 10.0%
!!! ACATAAAAACAATTATTTTT+GGG + chr8.1:2195294-2195313 None:intergenic 10.0%
!! AAATATAAAAATATAAAGCC+TGG - chr8.1:2197433-2197452 MS.gene012608:intron 15.0%
!! AATTGAAATAAATTTGAGAA+AGG + chr8.1:2194896-2194915 None:intergenic 15.0%
!! TATTTATAATCAAATAGATG+TGG - chr8.1:2196261-2196280 MS.gene012608:intron 15.0%
!! TCTAGATAAGAAATAAAATA+AGG + chr8.1:2195838-2195857 None:intergenic 15.0%
!!! AAATAATTGTTTTTATGTGA+TGG - chr8.1:2195296-2195315 MS.gene012608:intron 15.0%
!!! CACATAAAAACAATTATTTT+TGG + chr8.1:2195295-2195314 None:intergenic 15.0%
!!! TTTTAAGTCTTATATTTCAT+TGG - chr8.1:2196665-2196684 MS.gene012608:intron 15.0%
!! AAAAACTATTAGCAAAGATT+TGG - chr8.1:2195524-2195543 MS.gene012608:intron 20.0%
!! AAGCAATTATAGAAAGATAA+TGG + chr8.1:2197218-2197237 None:intergenic 20.0%
!! ATATAGAATGGTTTAAACTT+GGG - chr8.1:2197999-2198018 MS.gene012608:intron 20.0%
!! ATCCATATCAATCAATTAAA+TGG + chr8.1:2198993-2199012 None:intergenic 20.0%
!! ATTAATTACGAAAAAGCTAA+TGG + chr8.1:2198397-2198416 None:intergenic 20.0%
!! TAGACTGAAACAATATAATT+TGG + chr8.1:2199185-2199204 None:intergenic 20.0%
!! TATGCTAAATAACACTATTA+AGG + chr8.1:2197335-2197354 None:intergenic 20.0%
!! TCTATCATAAACCATATTTA+GGG + chr8.1:2195565-2195584 None:intergenic 20.0%
!! TTCTATCATAAACCATATTT+AGG + chr8.1:2195566-2195585 None:intergenic 20.0%
!! TTTAATTGATTGATATGGAT+TGG - chr8.1:2198993-2199012 MS.gene012608:intron 20.0%
!!! AGATTTTCTTGTGTTAATAA+TGG + chr8.1:2195903-2195922 None:intergenic 20.0%
!!! ATTTTATTTCTTATCTAGAC+AGG - chr8.1:2195839-2195858 MS.gene012608:intron 20.0%
!!! TATTCAATTTTTCAATCATC+AGG - chr8.1:2198066-2198085 MS.gene012608:intron 20.0%
!!! TTCATTTCTTATTTGATATG+TGG - chr8.1:2195127-2195146 MS.gene012608:intron 20.0%
!!! TTGTTGAAATCATTTTAGAT+AGG - chr8.1:2195651-2195670 MS.gene012608:CDS 20.0%
!!! TTTCTAAAAACATCATATCA+TGG - chr8.1:2198896-2198915 MS.gene012608:intron 20.0%
! AAACAGTCAGAATGAATTTA+AGG + chr8.1:2197776-2197795 None:intergenic 25.0%
! AATCTTTGATATTGTTTCCT+TGG - chr8.1:2199253-2199272 MS.gene012608:intron 25.0%
! ACATGAAAATCAATAATGCA+AGG + chr8.1:2199052-2199071 None:intergenic 25.0%
! AGATTTGGAAATTAATGAGT+TGG - chr8.1:2195539-2195558 MS.gene012608:intron 25.0%
! AGTACAATTCACATTAGAAA+AGG + chr8.1:2199714-2199733 None:intergenic 25.0%
! ATACAAGTCAAACTCTTATT+TGG - chr8.1:2199155-2199174 MS.gene012608:intron 25.0%
! ATACTATTTGCTTGAAAATG+AGG + chr8.1:2198678-2198697 None:intergenic 25.0%
! CAATTTGATTACTCATCAAT+TGG - chr8.1:2198215-2198234 MS.gene012608:intron 25.0%
! CACAAAATAACACTATAACA+TGG + chr8.1:2198452-2198471 None:intergenic 25.0%
! GATATAGAATGGTTTAAACT+TGG - chr8.1:2197998-2198017 MS.gene012608:intron 25.0%
! GATTAATGGCAAAATGAATT+TGG + chr8.1:2199081-2199100 None:intergenic 25.0%
! GTACAATTCACATTAGAAAA+GGG + chr8.1:2199713-2199732 None:intergenic 25.0%
! GTTACAAGTGCATTAAAAAA+AGG + chr8.1:2197948-2197967 None:intergenic 25.0%
! GTTTCGATACAATTATTTAC+TGG - chr8.1:2196569-2196588 MS.gene012608:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr8.1:2195571-2195590 MS.gene012608:intron 25.0%
! TTATAAGTTTGTGATGCATA+TGG - chr8.1:2196695-2196714 MS.gene012608:intron 25.0%
! TTGATGAGTAATCAAATTGA+AGG + chr8.1:2198214-2198233 None:intergenic 25.0%
! TTTGAGAAAGGAATGAATAA+TGG + chr8.1:2194884-2194903 None:intergenic 25.0%
!! AACCTCTTTTGTAAAAAACA+GGG - chr8.1:2198531-2198550 MS.gene012608:intron 25.0%
!! ATGGTTGAAATCATTTTATG+TGG - chr8.1:2195434-2195453 MS.gene012608:intron 25.0%
!! CTTCAATGAGTTGTATTTTA+TGG - chr8.1:2196238-2196257 MS.gene012608:intron 25.0%
!! CTTTTTATTCTTATCTGCTT+AGG - chr8.1:2197525-2197544 MS.gene012608:intron 25.0%
!! GAACATTTAGTTCAAAAGTT+GGG - chr8.1:2199329-2199348 MS.gene012608:intron 25.0%
!! GATCAACTTTCTTCAATTTT+AGG - chr8.1:2196952-2196971 MS.gene012608:CDS 25.0%
!! TCTTTGCTAATAGTTTTTCT+AGG + chr8.1:2195522-2195541 None:intergenic 25.0%
!! TGCCATTTAATTGATTGATA+TGG - chr8.1:2198988-2199007 MS.gene012608:intron 25.0%
!! TGCTTTATCGTTTTACAATA+TGG - chr8.1:2194945-2194964 MS.gene012608:CDS 25.0%
!! TTCAACATACAAGTTTTCAA+AGG - chr8.1:2195246-2195265 MS.gene012608:intron 25.0%
!!! ATTTTAGATAGGCACTTTTT+TGG - chr8.1:2195662-2195681 MS.gene012608:CDS 25.0%
!!! CATTTTCAAGCAAATAGTAT+AGG - chr8.1:2198678-2198697 MS.gene012608:CDS 25.0%
!!! CTTAATATGCATTTTGATGA+GGG + chr8.1:2199411-2199430 None:intergenic 25.0%
!!! TAATTGTTTTTATGTGATGG+TGG - chr8.1:2195299-2195318 MS.gene012608:intron 25.0%
!!! TGTTGGTCTTTTTTTTTACA+TGG - chr8.1:2197734-2197753 MS.gene012608:intron 25.0%
!!! TTGCATTATTGATTTTCATG+TGG - chr8.1:2199051-2199070 MS.gene012608:intron 25.0%
!!! TTTTAGAAAGTCAATCACAA+GGG + chr8.1:2198885-2198904 None:intergenic 25.0%
!!! TTTTAGATAGGCACTTTTTT+GGG - chr8.1:2195663-2195682 MS.gene012608:CDS 25.0%
!!! TTTTTAGAAAGTCAATCACA+AGG + chr8.1:2198886-2198905 None:intergenic 25.0%
AAAGTTGTCTTTCAAGCATT+TGG + chr8.1:2197021-2197040 None:intergenic 30.0%
AAATACACAAAACACACACA+AGG + chr8.1:2196768-2196787 None:intergenic 30.0%
AAATTTACTAATGCCCAACA+TGG + chr8.1:2198039-2198058 None:intergenic 30.0%
AACAAATATAATGCCAGACT+TGG + chr8.1:2198149-2198168 None:intergenic 30.0%
AACCATTCTATATCTTTCCA+AGG + chr8.1:2197992-2198011 None:intergenic 30.0%
AAGGGAACTAAAAAAGAAGT+TGG + chr8.1:2197479-2197498 None:intergenic 30.0%
AATATGAGGTCAAAATCTTC+CGG + chr8.1:2197591-2197610 None:intergenic 30.0%
AATGGCAAAATGAATTTGGA+TGG + chr8.1:2199077-2199096 None:intergenic 30.0%
AATTTACTAATGCCCAACAT+GGG + chr8.1:2198038-2198057 None:intergenic 30.0%
ACAAATATAATGCCAGACTT+GGG + chr8.1:2198148-2198167 None:intergenic 30.0%
AGAGATATGAAAATGAGTTG+AGG - chr8.1:2199774-2199793 MS.gene012608:CDS 30.0%
AGGGAACTAAAAAAGAAGTT+GGG + chr8.1:2197478-2197497 None:intergenic 30.0%
AGTACTTACAAAATTGCTCA+AGG + chr8.1:2197498-2197517 None:intergenic 30.0%
ATAAAAGGCAATGTTAACAG+AGG + chr8.1:2196862-2196881 None:intergenic 30.0%
ATCTTTGATGCAACATATCA+AGG - chr8.1:2196015-2196034 MS.gene012608:intron 30.0%
ATGAAATAACAAAAGGGAGA+TGG - chr8.1:2195808-2195827 MS.gene012608:intron 30.0%
ATGAGTAATCAAATTGAAGG+AGG + chr8.1:2198211-2198230 None:intergenic 30.0%
ATTAGAGTTGAAATTGCCTT+TGG + chr8.1:2194859-2194878 None:intergenic 30.0%
ATTTAATGACAAGGTTACCA+AGG - chr8.1:2196081-2196100 MS.gene012608:intron 30.0%
CAAGGATACTAGAAAATTAG+AGG + chr8.1:2199034-2199053 None:intergenic 30.0%
CAATTATTATCAGTGAGATG+TGG + chr8.1:2196453-2196472 None:intergenic 30.0%
CAGAGCTATTATATAGCTAT+TGG + chr8.1:2196828-2196847 None:intergenic 30.0%
CCATCCATGAAATAACAAAA+GGG - chr8.1:2195802-2195821 MS.gene012608:intron 30.0%
CTATTGCAGCATAAAAAGAA+AGG + chr8.1:2196525-2196544 None:intergenic 30.0%
CTCAACACAAAATTTCCAAA+AGG + chr8.1:2197408-2197427 None:intergenic 30.0%
CTCTTATAAATACCCATGTT+GGG - chr8.1:2198023-2198042 MS.gene012608:intron 30.0%
CTTCATTAATAGTTGCAGAA+TGG + chr8.1:2195356-2195375 None:intergenic 30.0%
GCAGTTAAGCAAAAGATAAA+AGG + chr8.1:2196877-2196896 None:intergenic 30.0%
GGTACTTATATACCACAATT+TGG + chr8.1:2196630-2196649 None:intergenic 30.0%
GGTTACTACAATATACCAAA+CGG - chr8.1:2198557-2198576 MS.gene012608:intron 30.0%
GTACTTACAAAATTGCTCAA+GGG + chr8.1:2197497-2197516 None:intergenic 30.0%
GTATTAGATTATTCACCCAT+TGG + chr8.1:2199103-2199122 None:intergenic 30.0%
GTTATTACAAGACGAATATG+AGG + chr8.1:2197605-2197624 None:intergenic 30.0%
TATATCTTTCCAAGGTCAAA+GGG + chr8.1:2197984-2198003 None:intergenic 30.0%
TCCATCCATGAAATAACAAA+AGG - chr8.1:2195801-2195820 MS.gene012608:intron 30.0%
TCCTTAAACTAGCATACTTA+TGG + chr8.1:2199447-2199466 None:intergenic 30.0%
TCTCTTATAAATACCCATGT+TGG - chr8.1:2198022-2198041 MS.gene012608:intron 30.0%
TCTTTGATGCAACATATCAA+GGG - chr8.1:2196016-2196035 MS.gene012608:intron 30.0%
TGATTCGTCTGATTATTTGT+TGG - chr8.1:2197717-2197736 MS.gene012608:intron 30.0%
TTATTCACCCATTGGATTAA+TGG + chr8.1:2199095-2199114 None:intergenic 30.0%
TTGTATATGTGAGTCATTTC+TGG + chr8.1:2199629-2199648 None:intergenic 30.0%
TTTACAATATGGTTTCAGGA+TGG - chr8.1:2194956-2194975 MS.gene012608:CDS 30.0%
TTTAGCTACATTAGATCACA+TGG + chr8.1:2197285-2197304 None:intergenic 30.0%
! ACCATAAGTATGCTAGTTTA+AGG - chr8.1:2199443-2199462 MS.gene012608:intron 30.0%
! AGATAATCTATGGCAGTTTT+TGG + chr8.1:2199662-2199681 None:intergenic 30.0%
! CATTATATTTGTTAGTGAGC+AGG - chr8.1:2198156-2198175 MS.gene012608:intron 30.0%
! CATTTTGCCATTAATCCAAT+GGG - chr8.1:2199085-2199104 MS.gene012608:intron 30.0%
! CTTTTGTAAAAAACAGGGTA+AGG - chr8.1:2198536-2198555 MS.gene012608:intron 30.0%
! GAACCTCTTTTGTAAAAAAC+AGG - chr8.1:2198530-2198549 MS.gene012608:intron 30.0%
! GGAACATTTAGTTCAAAAGT+TGG - chr8.1:2199328-2199347 MS.gene012608:intron 30.0%
! GTAATGACTAGTGTTGAAAA+GGG - chr8.1:2199503-2199522 MS.gene012608:intron 30.0%
! GTTTGGGGTAATAATTTCAA+TGG + chr8.1:2198743-2198762 None:intergenic 30.0%
! GTTTTGTGTATTTGATGTGT+TGG - chr8.1:2196775-2196794 MS.gene012608:CDS 30.0%
! TAAGTATGCTAGTTTAAGGA+TGG - chr8.1:2199447-2199466 MS.gene012608:intron 30.0%
! TCATTTTGCCATTAATCCAA+TGG - chr8.1:2199084-2199103 MS.gene012608:intron 30.0%
! TCGTTTTACAATATGGTTTC+AGG - chr8.1:2194952-2194971 MS.gene012608:CDS 30.0%
! TTTATGTGGATTTTGTAGCA+AGG - chr8.1:2195448-2195467 MS.gene012608:intron 30.0%
!! AAATGCTGTTTCTTCAATTC+AGG - chr8.1:2199478-2199497 MS.gene012608:intron 30.0%
!! ATTGTATACTTGTGCTGTTT+AGG - chr8.1:2197117-2197136 MS.gene012608:intron 30.0%
!! GCTTAATATGCATTTTGATG+AGG + chr8.1:2199412-2199431 None:intergenic 30.0%
!! TTCTTTTCAAGCACTAGTTT+TGG - chr8.1:2195922-2195941 MS.gene012608:intron 30.0%
!! TTGTATACTTGTGCTGTTTA+GGG - chr8.1:2197118-2197137 MS.gene012608:intron 30.0%
!! TTGTTATTTCATGGATGGAT+CGG + chr8.1:2195800-2195819 None:intergenic 30.0%
!!! ATCTCCCTTTTGTTATTTCA+TGG + chr8.1:2195809-2195828 None:intergenic 30.0%
!!! TACCCTGTTTTTTACAAAAG+AGG + chr8.1:2198536-2198555 None:intergenic 30.0%
!!! TAGTGTTATTTTGTGCTCAA+CGG - chr8.1:2198457-2198476 MS.gene012608:CDS 30.0%
AAAAAAGAAGTTGGGAGACA+GGG + chr8.1:2197470-2197489 None:intergenic 35.0%
AATCTATGAGATAGACGAGA+CGG + chr8.1:2197852-2197871 None:intergenic 35.0%
AATGCATATTAAGCCTAGTG+CGG - chr8.1:2199418-2199437 MS.gene012608:intron 35.0%
ACAGAAGAACAACTTAGGTT+GGG - chr8.1:2195186-2195205 MS.gene012608:intron 35.0%
ACATTAAATGCACACGTTTG+GGG + chr8.1:2198758-2198777 None:intergenic 35.0%
ACTACAATATACCAAACGGT+AGG - chr8.1:2198561-2198580 MS.gene012608:intron 35.0%
AGAACGATGTTTATCCTCAA+GGG - chr8.1:2199307-2199326 MS.gene012608:intron 35.0%
AGACATTAAATGCACACGTT+TGG + chr8.1:2198760-2198779 None:intergenic 35.0%
AGTAATCAAATTGAAGGAGG+AGG + chr8.1:2198208-2198227 None:intergenic 35.0%
ATAGATTATCTTCATCGAGC+AGG - chr8.1:2199671-2199690 MS.gene012608:intron 35.0%
ATATACCACAATTTGGCCAA+CGG + chr8.1:2196623-2196642 None:intergenic 35.0%
ATCACATGGATAGATGAGAA+TGG + chr8.1:2197271-2197290 None:intergenic 35.0%
ATGAAGCTCTGTCATTATGA+AGG - chr8.1:2195370-2195389 MS.gene012608:intron 35.0%
ATGAGACAGAAGAACAACTT+AGG - chr8.1:2195181-2195200 MS.gene012608:intron 35.0%
ATTAACTCCCAAGCATCTAA+TGG + chr8.1:2198641-2198660 None:intergenic 35.0%
ATTAGAAAAGGGTTTCCTAC+AGG + chr8.1:2199702-2199721 None:intergenic 35.0%
ATTTCCACATTTCCATGAGT+CGG - chr8.1:2197367-2197386 MS.gene012608:intron 35.0%
CAAGCAAATAGTATAGGACT+TGG - chr8.1:2198684-2198703 MS.gene012608:CDS 35.0%
CCATATAAAATCTGAGTCAG+TGG + chr8.1:2195418-2195437 None:intergenic 35.0%
CTATATCTTTCCAAGGTCAA+AGG + chr8.1:2197985-2198004 None:intergenic 35.0%
CTCGAATGTCAATCAAGTTT+AGG - chr8.1:2196492-2196511 MS.gene012608:CDS 35.0%
CTTTGATATTGTTTCCTTGG+AGG - chr8.1:2199256-2199275 MS.gene012608:intron 35.0%
CTTTGATGCAACATATCAAG+GGG - chr8.1:2196017-2196036 MS.gene012608:intron 35.0%
GACATTAAATGCACACGTTT+GGG + chr8.1:2198759-2198778 None:intergenic 35.0%
GACCTTGGAAAGATATAGAA+TGG - chr8.1:2197987-2198006 MS.gene012608:intron 35.0%
GGATTGTATCAAGGATAACA+GGG + chr8.1:2198119-2198138 None:intergenic 35.0%
GTATATAAGTACCATGCTCT+TGG - chr8.1:2196637-2196656 MS.gene012608:intron 35.0%
GTATATCCTACCATGTTGTT+CGG - chr8.1:2195748-2195767 MS.gene012608:CDS 35.0%
TAAAAAAGAAGTTGGGAGAC+AGG + chr8.1:2197471-2197490 None:intergenic 35.0%
TAGATGTGGTGACTAACAAA+TGG - chr8.1:2196275-2196294 MS.gene012608:intron 35.0%
TAGATTATCTTCATCGAGCA+GGG - chr8.1:2199672-2199691 MS.gene012608:intron 35.0%
TATATCCTACCATGTTGTTC+GGG - chr8.1:2195749-2195768 MS.gene012608:intron 35.0%
TCACATGGATAGATGAGAAT+GGG + chr8.1:2197270-2197289 None:intergenic 35.0%
TGAAATTCATGTCATCTTCG+AGG + chr8.1:2198940-2198959 None:intergenic 35.0%
TGCTCGATGAAGATAATCTA+TGG + chr8.1:2199672-2199691 None:intergenic 35.0%
TGTATCGAAACAAACACAAC+AGG + chr8.1:2196560-2196579 None:intergenic 35.0%
TTAACTTTATATCTCGCCGT+TGG - chr8.1:2196604-2196623 MS.gene012608:intron 35.0%
TTAAGAAATCGATTGTGCTG+TGG + chr8.1:2197658-2197677 None:intergenic 35.0%
TTACAAAAGAGGTTCTTTCC+AGG + chr8.1:2198525-2198544 None:intergenic 35.0%
TTCAAAAGTTGGGATGTCTT+TGG - chr8.1:2199339-2199358 MS.gene012608:intron 35.0%
TTCAAACCATTTCCCAACAT+AGG + chr8.1:2196802-2196821 None:intergenic 35.0%
TTCTCTTCGCATTTGAATTG+TGG - chr8.1:2197088-2197107 MS.gene012608:intron 35.0%
TTCTTATCTAGACAGGTTCT+GGG - chr8.1:2195846-2195865 MS.gene012608:intron 35.0%
TTGAACTAAATGTTCCCTTG+AGG + chr8.1:2199324-2199343 None:intergenic 35.0%
TTGACATAATTGTCTGAGAG+TGG + chr8.1:2194813-2194832 None:intergenic 35.0%
TTGTATCATGTGCAGAAGAA+AGG + chr8.1:2195697-2195716 None:intergenic 35.0%
TTGTTGTCATGTGACTGAAA+AGG - chr8.1:2198485-2198504 MS.gene012608:CDS 35.0%
TTTCTTATCTAGACAGGTTC+TGG - chr8.1:2195845-2195864 MS.gene012608:intron 35.0%
TTTCTTCAATTCAGGAGGTT+AGG - chr8.1:2199546-2199565 MS.gene012608:CDS 35.0%
TTTGTGATGCATATGGTTAG+TGG - chr8.1:2196702-2196721 MS.gene012608:intron 35.0%
! AAGGGGTTTTTCATACCTTT+TGG - chr8.1:2197390-2197409 MS.gene012608:intron 35.0%
! GGTAATGACTAGTGTTGAAA+AGG - chr8.1:2199502-2199521 MS.gene012608:intron 35.0%
! GTGGAATTGTAATTTTGTGC+AGG + chr8.1:2195399-2195418 None:intergenic 35.0%
! TAATGAGTTGGCCCTAAATA+TGG - chr8.1:2195551-2195570 MS.gene012608:intron 35.0%
!! GAAATTGCCTTTGGAGTAAT+TGG + chr8.1:2194850-2194869 None:intergenic 35.0%
!! GTTTGCTGTTTCTTCAATTC+AGG - chr8.1:2199538-2199557 MS.gene012608:intron 35.0%
!! TGTTATTTCATGGATGGATC+GGG + chr8.1:2195799-2195818 None:intergenic 35.0%
!!! CCACTGACTCAGATTTTATA+TGG - chr8.1:2195415-2195434 MS.gene012608:intron 35.0%
!!! CCCTTTTGTTATTTCATGGA+TGG + chr8.1:2195805-2195824 None:intergenic 35.0%
!!! GAAAGACAACTTTTTTCGCT+TGG - chr8.1:2197028-2197047 MS.gene012608:CDS 35.0%
AAAGGCAATGTTAACAGAGG+TGG + chr8.1:2196859-2196878 None:intergenic 40.0%
AACCGATGTTCCCAGTTAAT+CGG + chr8.1:2199209-2199228 None:intergenic 40.0%
AACTAGACATGGTCCCATTA+CGG + chr8.1:2195331-2195350 None:intergenic 40.0%
AAGCTCTGTCATTATGAAGG+TGG - chr8.1:2195373-2195392 MS.gene012608:intron 40.0%
AATTCATGTCATCTTCGAGG+AGG + chr8.1:2198937-2198956 None:intergenic 40.0%
ACATAATTGTCTGAGAGTGG+TGG + chr8.1:2194810-2194829 None:intergenic 40.0%
ACTGTTGCAACTACTATTGC+TGG + chr8.1:2196986-2197005 None:intergenic 40.0%
AGAATCACTGAAGGCAAATC+TGG + chr8.1:2197166-2197185 None:intergenic 40.0%
AGTAGCACTCATGAAACCTT+GGG + chr8.1:2199375-2199394 None:intergenic 40.0%
ATATGGTTTCAGGATGGAAG+AGG - chr8.1:2194962-2194981 MS.gene012608:CDS 40.0%
ATATTGTTTCCTTGGAGGAG+GGG - chr8.1:2199261-2199280 MS.gene012608:intron 40.0%
ATCATGTGCAGAAGAAAGGA+AGG + chr8.1:2195693-2195712 None:intergenic 40.0%
CATAATTGTCTGAGAGTGGT+GGG + chr8.1:2194809-2194828 None:intergenic 40.0%
CCCATATCCATTAGATGCTT+GGG - chr8.1:2198631-2198650 MS.gene012608:intron 40.0%
CGGATTGTATCAAGGATAAC+AGG + chr8.1:2198120-2198139 None:intergenic 40.0%
GACAGAAGAACAACTTAGGT+TGG - chr8.1:2195185-2195204 MS.gene012608:intron 40.0%
GACAGGGCTTATATAATTCC+AGG + chr8.1:2197454-2197473 None:intergenic 40.0%
GACTGTTTATGCTTTCCAGA+GGG - chr8.1:2197788-2197807 MS.gene012608:intron 40.0%
GAGAACGATGTTTATCCTCA+AGG - chr8.1:2199306-2199325 MS.gene012608:intron 40.0%
GATATTGTTTCCTTGGAGGA+GGG - chr8.1:2199260-2199279 MS.gene012608:intron 40.0%
GATCCATATTCACGTTAGTC+CGG - chr8.1:2197815-2197834 MS.gene012608:intron 40.0%
GCAAAGATCATGTACCATCA+TGG - chr8.1:2196147-2196166 MS.gene012608:intron 40.0%
GCAGAATGGAAAACTAGACA+TGG + chr8.1:2195342-2195361 None:intergenic 40.0%
TACACACACAGAATCACTGA+AGG + chr8.1:2197175-2197194 None:intergenic 40.0%
TAGATGGAGGAACATTGAGA+AGG - chr8.1:2196176-2196195 MS.gene012608:intron 40.0%
TATAAGTACCATGCTCTTGG+AGG - chr8.1:2196640-2196659 MS.gene012608:intron 40.0%
TCAATTCAGGAGGTTAGGAA+AGG - chr8.1:2199551-2199570 MS.gene012608:CDS 40.0%
TCCATTGCAATTGCATTGCA+CGG + chr8.1:2196304-2196323 None:intergenic 40.0%
TCTGAGAAGTCGAAAAATGC+TGG - chr8.1:2198842-2198861 MS.gene012608:intron 40.0%
TGACTGTTTATGCTTTCCAG+AGG - chr8.1:2197787-2197806 MS.gene012608:intron 40.0%
TGATATTGTTTCCTTGGAGG+AGG - chr8.1:2199259-2199278 MS.gene012608:intron 40.0%
TGATGCATATGGTTAGTGGA+TGG - chr8.1:2196706-2196725 MS.gene012608:intron 40.0%
TGATGTGTTGGACCTATGTT+GGG - chr8.1:2196787-2196806 MS.gene012608:intron 40.0%
TTAAAACACCTCCAAGAGCA+TGG + chr8.1:2196651-2196670 None:intergenic 40.0%
TTACTTGCATGCCAAGTTCA+CGG + chr8.1:2195955-2195974 None:intergenic 40.0%
TTCAGAACATTTGTCCTGTG+AGG - chr8.1:2198320-2198339 MS.gene012608:intron 40.0%
TTCAGTCTACCCGATTAACT+GGG - chr8.1:2199196-2199215 MS.gene012608:intron 40.0%
TTGATGTGTTGGACCTATGT+TGG - chr8.1:2196786-2196805 MS.gene012608:intron 40.0%
TTTCAGTCTACCCGATTAAC+TGG - chr8.1:2199195-2199214 MS.gene012608:intron 40.0%
! AACTATTTCTCATGCCTCAC+AGG + chr8.1:2198337-2198356 None:intergenic 40.0%
! AAGGCACAAGAGTTGGTTTA+AGG - chr8.1:2196195-2196214 MS.gene012608:intron 40.0%
! AATGGTGCAGCTGTATGTTT+TGG + chr8.1:2197200-2197219 None:intergenic 40.0%
! ATGCATATGGTTAGTGGATG+GGG - chr8.1:2196708-2196727 MS.gene012608:intron 40.0%
! CAGTCATTTGCCTTTTCCAA+GGG + chr8.1:2196047-2196066 None:intergenic 40.0%
! CCCAAGCATCTAATGGATAT+GGG + chr8.1:2198634-2198653 None:intergenic 40.0%
! GATGCATATGGTTAGTGGAT+GGG - chr8.1:2196707-2196726 MS.gene012608:intron 40.0%
! GTTATTTCATGGATGGATCG+GGG + chr8.1:2195798-2195817 None:intergenic 40.0%
! GTTCATTGCTGTTGTTGTTG+TGG - chr8.1:2195068-2195087 MS.gene012608:intron 40.0%
! TCAGTCATTTGCCTTTTCCA+AGG + chr8.1:2196048-2196067 None:intergenic 40.0%
! TCCCAAGCATCTAATGGATA+TGG + chr8.1:2198635-2198654 None:intergenic 40.0%
! TGACTAGTGTTGAAAAGGGA+TGG - chr8.1:2199507-2199526 MS.gene012608:intron 40.0%
!! AAGAACAACTTAGGTTGGGA+GGG - chr8.1:2195190-2195209 MS.gene012608:intron 40.0%
!! TAACTGGGAACATCGGTTTA+AGG - chr8.1:2199211-2199230 MS.gene012608:intron 40.0%
!! TGCTGTTTCTTCAATTCAGG+AGG - chr8.1:2199481-2199500 MS.gene012608:intron 40.0%
!! TTGCCTTTGGAGTAATTGGT+CGG + chr8.1:2194846-2194865 None:intergenic 40.0%
!!! GCTTTGCCTCATCTTTTTTC+TGG - chr8.1:2195020-2195039 MS.gene012608:CDS 40.0%
!!! TTTTTTCGCTTGGAACCTTG+CGG - chr8.1:2197038-2197057 MS.gene012608:CDS 40.0%
AAAGCCAACAGGAGTTGAAG+GGG - chr8.1:2196123-2196142 MS.gene012608:intron 45.0%
AAAGTCAATCACAAGGGACG+TGG + chr8.1:2198879-2198898 None:intergenic 45.0%
AAGCCTGAATGAGCAGCATA+AGG + chr8.1:2196931-2196950 None:intergenic 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr8.1:2195467-2195486 MS.gene012608:intron 45.0%
ACAAGGTTACCAAGGTTGCT+AGG - chr8.1:2196089-2196108 MS.gene012608:intron 45.0%
ACATTTCCATGAGTCGGAAG+GGG - chr8.1:2197373-2197392 MS.gene012608:intron 45.0%
ACCCGATTAACTGGGAACAT+CGG - chr8.1:2199204-2199223 MS.gene012608:intron 45.0%
ACCGATGTTCCCAGTTAATC+GGG + chr8.1:2199208-2199227 None:intergenic 45.0%
AGCAAGGAGAGTAGATCAGA+TGG - chr8.1:2195464-2195483 MS.gene012608:intron 45.0%
AGCCTGAATGAGCAGCATAA+GGG + chr8.1:2196930-2196949 None:intergenic 45.0%
AGGAGAGTAGATCAGATGGA+GGG - chr8.1:2195468-2195487 MS.gene012608:intron 45.0%
AGTCAAATCACTAGAGGCAG+AGG - chr8.1:2195492-2195511 MS.gene012608:intron 45.0%
ATACTTATGGTAGCCGCACT+AGG + chr8.1:2199434-2199453 None:intergenic 45.0%
ATCTTTCCAAGGTCAAAGGG+TGG + chr8.1:2197981-2198000 None:intergenic 45.0%
ATTATCTTCATCGAGCAGGG+AGG - chr8.1:2199675-2199694 MS.gene012608:intron 45.0%
ATTCAGGAGGTTAGGAAAGG+TGG - chr8.1:2199554-2199573 MS.gene012608:CDS 45.0%
CAAAGCAAGTGAGTTCTCTC+CGG - chr8.1:2197569-2197588 MS.gene012608:CDS 45.0%
CAAAGCCAACAGGAGTTGAA+GGG - chr8.1:2196122-2196141 MS.gene012608:intron 45.0%
CACATTTCCATGAGTCGGAA+GGG - chr8.1:2197372-2197391 MS.gene012608:intron 45.0%
CACTGGCAAAAACTGTCTGA+CGG + chr8.1:2197627-2197646 None:intergenic 45.0%
CATGTGACTGAAAAGGTCAC+AGG - chr8.1:2198492-2198511 MS.gene012608:CDS 45.0%
GAATATGGATCACATCCCTC+TGG + chr8.1:2197806-2197825 None:intergenic 45.0%
GAGAGAACTCACTTGCTTTG+AGG + chr8.1:2197569-2197588 None:intergenic 45.0%
GAGCATGAAGTATGCAGTCA+CGG + chr8.1:2195046-2195065 None:intergenic 45.0%
GAGGGTAGTCAAATCACTAG+AGG - chr8.1:2195486-2195505 MS.gene012608:intron 45.0%
GAGTAGCACTCATGAAACCT+TGG + chr8.1:2199376-2199395 None:intergenic 45.0%
GCCCATATCCATTAGATGCT+TGG - chr8.1:2198630-2198649 MS.gene012608:intron 45.0%
GGATGGGGGAATTACAGATT+AGG - chr8.1:2196723-2196742 MS.gene012608:intron 45.0%
GTTGCAACTACTATTGCTGG+AGG + chr8.1:2196983-2197002 None:intergenic 45.0%
GTTGGACCTATGTTGGGAAA+TGG - chr8.1:2196793-2196812 MS.gene012608:intron 45.0%
TACCAAGGTTGCTAGGATAC+TGG - chr8.1:2196096-2196115 MS.gene012608:intron 45.0%
TACTTGCATGCCAAGTTCAC+GGG + chr8.1:2195954-2195973 None:intergenic 45.0%
TATTGTTTCCTTGGAGGAGG+GGG - chr8.1:2199262-2199281 MS.gene012608:intron 45.0%
TCACGGCCAGAAAAAAGATG+AGG + chr8.1:2195029-2195048 None:intergenic 45.0%
TCCATCTAACAGAGCCATGA+TGG + chr8.1:2196164-2196183 None:intergenic 45.0%
TCCGTGCAATGCAATTGCAA+TGG - chr8.1:2196300-2196319 MS.gene012608:intron 45.0%
TCTGTCTCATTTACGCACTC+AGG + chr8.1:2195171-2195190 None:intergenic 45.0%
TCTTTCCAAGGTCAAAGGGT+GGG + chr8.1:2197980-2197999 None:intergenic 45.0%
TGACTGCATACTTCATGCTC+AGG - chr8.1:2195046-2195065 MS.gene012608:intron 45.0%
TGAGATGTGGCTGCAAAATG+TGG + chr8.1:2196440-2196459 None:intergenic 45.0%
TGGATATGTCATGCCTACAC+CGG - chr8.1:2194986-2195005 MS.gene012608:CDS 45.0%
TGTGGCTGCAAAATGTGGAA+TGG + chr8.1:2196435-2196454 None:intergenic 45.0%
TTCCCGACCAATTACTCCAA+AGG - chr8.1:2194840-2194859 MS.gene012608:CDS 45.0%
TTCCCTTATGCTGCTCATTC+AGG - chr8.1:2196925-2196944 MS.gene012608:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr8.1:2195620-2195639 None:intergenic 45.0%
! ACCATCATGGCTCTGTTAGA+TGG - chr8.1:2196160-2196179 MS.gene012608:intron 45.0%
! ATCATGGCTCTGTTAGATGG+AGG - chr8.1:2196163-2196182 MS.gene012608:intron 45.0%
! ATGGTGGAATCAGCCGTAAT+GGG - chr8.1:2195315-2195334 MS.gene012608:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr8.1:2195621-2195640 None:intergenic 45.0%
! CATTGAGAAGGCACAAGAGT+TGG - chr8.1:2196188-2196207 MS.gene012608:intron 45.0%
! CTTTGGCTTCAAATCACCCA+AGG - chr8.1:2199356-2199375 MS.gene012608:intron 45.0%
! GATGAGGCAAAGCTTGTTTC+TGG + chr8.1:2195013-2195032 None:intergenic 45.0%
! GCACAAGAGTTGGTTTAAGG+TGG - chr8.1:2196198-2196217 MS.gene012608:intron 45.0%
! TCAGGAGTGTAAGCAAACTC+AGG + chr8.1:2195153-2195172 None:intergenic 45.0%
! TGCATATGGTTAGTGGATGG+GGG - chr8.1:2196709-2196728 MS.gene012608:intron 45.0%
! TTTTTCGCTTGGAACCTTGC+GGG - chr8.1:2197039-2197058 MS.gene012608:CDS 45.0%
!! AGAACAACTTAGGTTGGGAG+GGG - chr8.1:2195191-2195210 MS.gene012608:intron 45.0%
!! GAAGAACAACTTAGGTTGGG+AGG - chr8.1:2195189-2195208 MS.gene012608:intron 45.0%
!! TGCCTTTGGAGTAATTGGTC+GGG + chr8.1:2194845-2194864 None:intergenic 45.0%
!! TGTGCAGCAGAAATGGACTA+AGG - chr8.1:2197684-2197703 MS.gene012608:intron 45.0%
AAGGGGAACACCCTTGGAAA+AGG - chr8.1:2196034-2196053 MS.gene012608:intron 50.0%
AAGGTCACAGGTTCAAGTCC+TGG - chr8.1:2198504-2198523 MS.gene012608:intron 50.0%
ACAAAGCTCCCGCATATGCA+GGG + chr8.1:2198600-2198619 None:intergenic 50.0%
ACGAAGCTGTGCAGCAGAAA+TGG - chr8.1:2197677-2197696 MS.gene012608:intron 50.0%
AGGAGGGGGAATCAAGAATG+GGG - chr8.1:2199276-2199295 MS.gene012608:intron 50.0%
ATCAACAACCAACACCCGCA+AGG + chr8.1:2197056-2197075 None:intergenic 50.0%
ATGAGATAGACGAGACGGCA+TGG + chr8.1:2197847-2197866 None:intergenic 50.0%
CAAGGTTGCTAGGATACTGG+CGG - chr8.1:2196099-2196118 MS.gene012608:intron 50.0%
CATATCAAGGGGAACACCCT+TGG - chr8.1:2196028-2196047 MS.gene012608:intron 50.0%
CCACATTTCCATGAGTCGGA+AGG - chr8.1:2197371-2197390 MS.gene012608:intron 50.0%
CCACCGGACTAACGTGAATA+TGG + chr8.1:2197821-2197840 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr8.1:2195619-2195638 MS.gene012608:intron 50.0%
CCATATTCACGTTAGTCCGG+TGG - chr8.1:2197818-2197837 MS.gene012608:intron 50.0%
CCTTCCGACTCATGGAAATG+TGG + chr8.1:2197374-2197393 None:intergenic 50.0%
CTTAGTGGGATAAGGCTTGG+TGG - chr8.1:2195622-2195641 MS.gene012608:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr8.1:2195616-2195635 None:intergenic 50.0%
CTTTCCAAGGTCAAAGGGTG+GGG + chr8.1:2197979-2197998 None:intergenic 50.0%
GAAAAACCCCTTCCGACTCA+TGG + chr8.1:2197382-2197401 None:intergenic 50.0%
GAGATAGAGCCCGAACAACA+TGG + chr8.1:2195761-2195780 None:intergenic 50.0%
GAGGAGGGGGAATCAAGAAT+GGG - chr8.1:2199275-2199294 MS.gene012608:intron 50.0%
GCAAAGCCAACAGGAGTTGA+AGG - chr8.1:2196121-2196140 MS.gene012608:intron 50.0%
GCAACAGATGTAGCAGCTAG+AGG - chr8.1:2199593-2199612 MS.gene012608:CDS 50.0%
GGGGAATCAAGAATGGGGAA+CGG - chr8.1:2199281-2199300 MS.gene012608:intron 50.0%
GGTTTCAGGATGGAAGAGGT+TGG - chr8.1:2194966-2194985 MS.gene012608:CDS 50.0%
GTGCTGTGGTATAGATGCAC+TGG + chr8.1:2197644-2197663 None:intergenic 50.0%
TAGAGCCCGAACAACATGGT+AGG + chr8.1:2195757-2195776 None:intergenic 50.0%
TCAATCACAAGGGACGTGGA+TGG + chr8.1:2198875-2198894 None:intergenic 50.0%
TCATGTCATCTTCGAGGAGG+AGG + chr8.1:2198934-2198953 None:intergenic 50.0%
TGAGATAGACGAGACGGCAT+GGG + chr8.1:2197846-2197865 None:intergenic 50.0%
TTCACGAGCAGCTTCTCTGT+TGG - chr8.1:2198961-2198980 MS.gene012608:intron 50.0%
! AATGCCAGACTTGGGAGCAT+CGG + chr8.1:2198140-2198159 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr8.1:2195622-2195641 None:intergenic 50.0%
! TCTAATGGATATGGGCAGCC+CGG + chr8.1:2198626-2198645 None:intergenic 50.0%
!! GATGGTGGAATCAGCCGTAA+TGG - chr8.1:2195314-2195333 MS.gene012608:intron 50.0%
!! GGCAAAGCTTGTTTCTGGAC+CGG + chr8.1:2195008-2195027 None:intergenic 50.0%
!! GGGAGCATCGGATTGTATCA+AGG + chr8.1:2198128-2198147 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr8.1:2195608-2195627 None:intergenic 55.0%
ATACTGGCGGCAAAGCCAAC+AGG - chr8.1:2196112-2196131 MS.gene012608:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr8.1:2195607-2195626 MS.gene012608:intron 55.0%
CAATCCGATGCTCCCAAGTC+TGG - chr8.1:2198133-2198152 MS.gene012608:intron 55.0%
CACAAAGCTCCCGCATATGC+AGG + chr8.1:2198601-2198620 None:intergenic 55.0%
CACCAGCATTACAGTCTCGC+AGG - chr8.1:2199736-2199755 MS.gene012608:intron 55.0%
CAGGAGGTTAGGAAAGGTGG+CGG - chr8.1:2199557-2199576 MS.gene012608:CDS 55.0%
CATATGCAGGGTTCGGGAAG+GGG + chr8.1:2198588-2198607 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr8.1:2195614-2195633 MS.gene012608:intron 55.0%
CGCCAGTATCCTAGCAACCT+TGG + chr8.1:2196101-2196120 None:intergenic 55.0%
CTCCTGCGAGACTGTAATGC+TGG + chr8.1:2199741-2199760 None:intergenic 55.0%
CTTCCCGAACCCTGCATATG+CGG - chr8.1:2198588-2198607 MS.gene012608:intron 55.0%
CTTTCCCCACCCTTTGACCT+TGG - chr8.1:2197972-2197991 MS.gene012608:intron 55.0%
GCATATGCAGGGTTCGGGAA+GGG + chr8.1:2198589-2198608 None:intergenic 55.0%
GCATTACAGTCTCGCAGGAG+CGG - chr8.1:2199741-2199760 MS.gene012608:intron 55.0%
GGAGGAGGGGGAATCAAGAA+TGG - chr8.1:2199274-2199293 MS.gene012608:intron 55.0%
TCTCGCCGTTGGCCAAATTG+TGG - chr8.1:2196615-2196634 MS.gene012608:intron 55.0%
TCTTGATTCCCCCTCCTCCA+AGG + chr8.1:2199273-2199292 None:intergenic 55.0%
TGCATGCCAAGTTCACGGGT+GGG + chr8.1:2195950-2195969 None:intergenic 55.0%
TGCTCCCCTTCAACTCCTGT+TGG + chr8.1:2196130-2196149 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr8.1:2195608-2195627 MS.gene012608:intron 55.0%
TTCCCGAACCCTGCATATGC+GGG - chr8.1:2198589-2198608 MS.gene012608:intron 55.0%
TTGCATGCCAAGTTCACGGG+TGG + chr8.1:2195951-2195970 None:intergenic 55.0%
! TATGCGGGAGCTTTGTGCAC+CGG - chr8.1:2198604-2198623 MS.gene012608:intron 55.0%
!! GCGGGTGTTGGTTGTTGATG+AGG - chr8.1:2197057-2197076 MS.gene012608:intron 55.0%
!! GCTTGTTTCTGGACCGGTGT+AGG + chr8.1:2195002-2195021 None:intergenic 55.0%
ATCGAGCAGGGAGGACCTGT+AGG - chr8.1:2199684-2199703 MS.gene012608:intron 60.0%
CGCATATGCAGGGTTCGGGA+AGG + chr8.1:2198590-2198609 None:intergenic 60.0%
CTCCCGCATATGCAGGGTTC+GGG + chr8.1:2198594-2198613 None:intergenic 60.0%
GCTCCCGCATATGCAGGGTT+CGG + chr8.1:2198595-2198614 None:intergenic 60.0%
GCTTGGAACCTTGCGGGTGT+TGG - chr8.1:2197045-2197064 MS.gene012608:intron 60.0%
! ATGCGGGAGCTTTGTGCACC+GGG - chr8.1:2198605-2198624 MS.gene012608:intron 60.0%
! TTGGTGCCCACCCGTGAACT+TGG - chr8.1:2195941-2195960 MS.gene012608:intron 60.0%
CGGGAAGGGGTCCTACCGTT+TGG + chr8.1:2198575-2198594 None:intergenic 65.0%
CGAGACGGCATGGGCTCCAC+CGG + chr8.1:2197837-2197856 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 2194786 2199823 2194786 ID=MS.gene012608
chr8.1 mRNA 2194786 2199823 2194786 ID=MS.gene012608.t1;Parent=MS.gene012608
chr8.1 exon 2199771 2199823 2199771 ID=MS.gene012608.t1.exon1;Parent=MS.gene012608.t1
chr8.1 CDS 2199771 2199823 2199771 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2199542 2199635 2199542 ID=MS.gene012608.t1.exon2;Parent=MS.gene012608.t1
chr8.1 CDS 2199542 2199635 2199542 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2198639 2198752 2198639 ID=MS.gene012608.t1.exon3;Parent=MS.gene012608.t1
chr8.1 CDS 2198639 2198752 2198639 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2198393 2198515 2198393 ID=MS.gene012608.t1.exon4;Parent=MS.gene012608.t1
chr8.1 CDS 2198393 2198515 2198393 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2197531 2197635 2197531 ID=MS.gene012608.t1.exon5;Parent=MS.gene012608.t1
chr8.1 CDS 2197531 2197635 2197531 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2196904 2197062 2196904 ID=MS.gene012608.t1.exon6;Parent=MS.gene012608.t1
chr8.1 CDS 2196904 2197062 2196904 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2196734 2196802 2196734 ID=MS.gene012608.t1.exon7;Parent=MS.gene012608.t1
chr8.1 CDS 2196734 2196802 2196734 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2196432 2196521 2196432 ID=MS.gene012608.t1.exon8;Parent=MS.gene012608.t1
chr8.1 CDS 2196432 2196521 2196432 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2195627 2195767 2195627 ID=MS.gene012608.t1.exon9;Parent=MS.gene012608.t1
chr8.1 CDS 2195627 2195767 2195627 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
chr8.1 exon 2194786 2195049 2194786 ID=MS.gene012608.t1.exon10;Parent=MS.gene012608.t1
chr8.1 CDS 2194786 2195049 2194786 ID=cds.MS.gene012608.t1;Parent=MS.gene012608.t1
Gene Sequence

>MS.gene012608

ATGATACAGTTCGAACAACTCCCACCACTCTCAGACAATTATGTCAATATCATGTTCCCGACCAATTACTCCAAAGGCAATTTCAACTCTAATTTCCATTATTCATTCCTTTCTCAAATTTATTTCAATTTTATTATTATTTTTTCACACATTCTAATCTGCTTTATCGTTTTACAATATGGTTTCAGGATGGAAGAGGTTGGATATGTCATGCCTACACCGGTCCAGAAACAAGCTTTGCCTCATCTTTTTTCTGGCCGTGACTGCATACTTCATGCTCAGGTTCATTGCTGTTGTTGTTGTGGCATTAATGATGATAAATACAATAATGTATACTCACTTTCATTTCTTATTTGATATGTGGCCTGAGTTTGCTTACACTCCTGAGTGCGTAAATGAGACAGAAGAACAACTTAGGTTGGGAGGGGAAATAACTTGTTAAGAGATAGAATCAGAAAATTTCAACATACAAGTTTTCAAAGGTTCAACATCTAATTATAAGCATCCCAAAAATAATTGTTTTTATGTGATGGTGGAATCAGCCGTAATGGGACCATGTCTAGTTTTCCATTCTGCAACTATTAATGAAGCTCTGTCATTATGAAGGTGGCCTGCACAAAATTACAATTCCACTGACTCAGATTTTATATGGTTGAAATCATTTTATGTGGATTTTGTAGCAAGGAGAGTAGATCAGATGGAGGGTAGTCAAATCACTAGAGGCAGAGGAAGACCTAGAAAAACTATTAGCAAAGATTTGGAAATTAATGAGTTGGCCCTAAATATGGTTTATGATAGAACATTATGGCGTAATTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCTTGGTGGTTGTTGTTGTTGAAATCATTTTAGATAGGCACTTTTTTGGGCATGCCTTCCTTTCTTCTGCACATGATACAAATTCTATGAAGTTTCTATTATACTTTTCTATGTATATCCTACCATGTTGTTCGGGCTCTATCTCTGTCTAAGTATCATCCCCGATCCATCCATGAAATAACAAAAGGGAGATGGTTAACCTTATTTTATTTCTTATCTAGACAGGTTCTGGGAAGACACTTGCATACTTGCTTTTGATCTATTCCATTATTAACACAAGAAAATCTTCTTTTCAAGCACTAGTTTTGGTGCCCACCCGTGAACTTGGCATGCAAGTAAGATTTTGTATGAGCTATGATGTCATAGTGACATGTTAATTATCTTTGATGCAACATATCAAGGGGAACACCCTTGGAAAAGGCAAATGACTGAGTGCAAAAAATATATTTAATGACAAGGTTACCAAGGTTGCTAGGATACTGGCGGCAAAGCCAACAGGAGTTGAAGGGGAGCAAAGATCATGTACCATCATGGCTCTGTTAGATGGAGGAACATTGAGAAGGCACAAGAGTTGGTTTAAGGTGGAAATCTTTCATCATCTTCTTCAATGAGTTGTATTTTATGGTATTTATAATCAAATAGATGTGGTGACTAACAAATGGTTTCCGTGCAATGCAATTGCAATGGACTTTGTGTTTGCTTATATGTATATCTATCAGTTTGATATAAAAATTGACTCTTATTCAACATATGTGCAACTAATGCAGTTCATTTGTACTCAGTCAGTTAGTTTTTTCCATTCCACATTTTGCAGCCACATCTCACTGATAATAATTGATGCACAATACTGCAGTTTCTCGAATGTCAATCAAGTTTAGGATACTGTCCTTTCTTTTTATGCTGCAATAGTAAATTATTTAACCTGTTGTGTTTGTTTCGATACAATTATTTACTGGAGTAGTTGTTATTTAACTTTATATCTCGCCGTTGGCCAAATTGTGGTATATAAGTACCATGCTCTTGGAGGTGTTTTAAGTCTTATATTTCATTGGATATATCTTATAAGTTTGTGATGCATATGGTTAGTGGATGGGGGAATTACAGATTAGGCATGTATGATCAACTAATTCCTTGTGTGTGTTTTGTGTATTTGATGTGTTGGACCTATGTTGGGAAATGGTTTGAATTTCCAATAGCTATATAATAGCTCTGATTGAACACCACCTCTGTTAACATTGCCTTTTATCTTTTGCTTAACTGCTCGCTAGCTGCACTAGTATTATAGAGAATTCCCTTATGCTGCTCATTCAGGCTTTGATCAACTTTCTTCAATTTTAGGCTGAGCCTCCAGCAATAGTAGTTGCAACAGTTGAGAGTTTGTGCCAAATGCTTGAAAGACAACTTTTTTCGCTTGGAACCTTGCGGGTGTTGGTTGTTGATGAGGTAAAAGTTTTCTCTTCGCATTTGAATTGTGGCTTGTCATTGTATACTTGTGCTGTTTAGGGTAAGAACTAAGAAAGCGAAATTCCAGATTTGCCTTCAGTGATTCTGTGTGTGTATTCCAAAACATACAGCTGCACCATTATCTTTCTATAATTGCTTTAAAAACGATATAGAATGTTATTAGTCATCCCATTCTCATCTATCCATGTGATCTAATGTAGCTAAAGAAAGCAAGTAAAGTAATTTATAAGCACCTTAATAGTGTTATTTAGCATATTAGAGTACATTATTTCCACATTTCCATGAGTCGGAAGGGGTTTTTCATACCTTTTGGAAATTTTGTGTTGAGTTGAGAAATATAAAAATATAAAGCCTGGAATTATATAAGCCCTGTCTCCCAACTTCTTTTTTAGTTCCCTTGAGCAATTTTGTAAGTACTTATTATACTTTTTATTCTTATCTGCTTAGGTTGACTTCATTTTCAATTCCTCAAAGCAAGTGAGTTCTCTCCGGAAGATTTTGACCTCATATTCGTCTTGTAATAACCGTCAGACAGTTTTTGCCAGTGCATCTATACCACAGCACAATCGATTTCTTAACGAAGCTGTGCAGCAGAAATGGACTAAGGTATATTAATCTGATTCGTCTGATTATTTGTTGGTCTTTTTTTTTACATGGATTATTTGTTTGTCTGCCTTAAATTCATTCTGACTGTTTATGCTTTCCAGAGGGATGTGATCCATATTCACGTTAGTCCGGTGGAGCCCATGCCGTCTCGTCTATCTCATAGATTTATAGTAAGAAATCTTGAGTATTAAAGTAACTTCTTGTATTTCTAATTTTCTATTACTTAAAACAAAACTTAGCCTTTTTTTAATGCACTTGTAACTCATCTTTCCCCACCCTTTGACCTTGGAAAGATATAGAATGGTTTAAACTTGGGTCTCTTATAAATACCCATGTTGGGCATTAGTAAATTTCTAATGCTATTCAATTTTTCAATCATCAGGTATGTGATATAAAAAGAAAACTACAAACCCTGTTATCCTTGATACAATCCGATGCTCCCAAGTCTGGCATTATATTTGTTAGTGAGCAGGTATGCTGATAATGTCTTCTTATATTACCTCCTCCTTCAATTTGATTACTCATCAATTGGATAATGCAATCAGTAGTCTATGCTCAGCGAGTAGATGAAATTTACTTTATAATTAGTATGTGAATTACTTTGTTAATAATTTTTCAGAACATTTGTCCTGTGAGGCATGAGAAATAGTTGTAAGCTACATTAAATAATTTCAAAAATGAACTAATGCCATTAGCTTTTTCGTAATTAATGTTTGATGCATATTATAAGCGATGAGCGTTTTCCATGTTATAGTGTTATTTTGTGCTCAACGGTTAAGTTGTTGTCATGTGACTGAAAAGGTCACAGGTTCAAGTCCTGGAAAGAACCTCTTTTGTAAAAAACAGGGTAAGGTTACTACAATATACCAAACGGTAGGACCCCTTCCCGAACCCTGCATATGCGGGAGCTTTGTGCACCGGGCTGCCCATATCCATTAGATGCTTGGGAGTTAATTTAGAGATCAGCTGCCTCATTTTCAAGCAAATAGTATAGGACTTGGTTGCTTGCATTATTTAGTACTTTTCAGTTGACACCATTGAAATTATTACCCCAAACGTGTGCATTTAATGTCTGTTTGAATCAGGTAATATGATAAAGTTATCAATCATCTAATATTATATATTCTATTATGCAGTCTGAGAAGTCGAAAAATGCTGGTAATTCTCCATCCACGTCCCTTGTGATTGACTTTCTAAAAACATCATATCATGGTTCTTTAGATATCCTCCTCCTCGAAGATGACATGAATTTCAATTCACGAGCAGCTTCTCTGTTGGTAAGTGCCATTTAATTGATTGATATGGATTGGAAATCTCATTAGTAACCTCTAATTTTCTAGTATCCTTGCATTATTGATTTTCATGTGGCCATCCAAATTCATTTTGCCATTAATCCAATGGGTGAATAATCTAATACAACTTATAACTGAGTTTGAAACAAGATTTAATATACAAGTCAAACTCTTATTTGGATAACCAAATTATATTGTTTCAGTCTACCCGATTAACTGGGAACATCGGTTTAAGGACAAACAACATTTTAATAAAATCTTTGATATTGTTTCCTTGGAGGAGGGGGAATCAAGAATGGGGAACGGCTGAGAACGATGTTTATCCTCAAGGGAACATTTAGTTCAAAAGTTGGGATGTCTTTGGCTTCAAATCACCCAAGGTTTCATGAGTGCTACTCTTATAGAATTGACCCTCATCAAAATGCATATTAAGCCTAGTGCGGCTACCATAAGTATGCTAGTTTAAGGATGGTAGTGTTAAAATGCTGTTTCTTCAATTCAGGAGGTAATGACTAGTGTTGAAAAGGGATGGTAATGATTGTTTGCTGTTTCTTCAATTCAGGAGGTTAGGAAAGGTGGCGGCTATCTTCTAGTAGCAACAGATGTAGCAGCTAGAGGAGTTGACTTTCCAGAAATGACTCACATATACAACTTTGATCTGCCAAAAACTGCCATAGATTATCTTCATCGAGCAGGGAGGACCTGTAGGAAACCCTTTTCTAATGTGAATTGTACTGTCACCAGCATTACAGTCTCGCAGGAGCGGTTTGTTCTGCAGAGATATGAAAATGAGTTGAGGTTTGTCTGTACAGAGCTTATTCCATAA
Protein sequence

>MS.gene012608.t1

MIQFEQLPPLSDNYVNIMMEEVGYVMPTPVQKQALPHLFSGRDCILHAQTGSGKTLAYLLLIYSIINTRKSSFQALVLVPTRELGMQVTKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGTLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPKSGIIFVSEQSEKSKNAGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNFDLPKTAIDYLHRAGRTCRKPFSNVNCTVTSITVSQERFVLQRYENELRFVCTELIP