Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68222.t1 | PNY03596.1 | 92.3 | 413 | 27 | 2 | 1 | 413 | 1 | 408 | 3.10E-217 | 764.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68222.t1 | P93397 | 85.8 | 372 | 52 | 1 | 1 | 372 | 1 | 371 | 3.3e-191 | 669.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68222.t1 | A0A2K3NKK6 | 92.3 | 413 | 27 | 2 | 1 | 413 | 1 | 408 | 2.2e-217 | 764.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68222.t1 | MTR_3g116500 | 98.387 | 372 | 6 | 0 | 1 | 372 | 1 | 372 | 0.0 | 751 |
MS.gene68222.t1 | MTR_3g116500 | 97.710 | 262 | 6 | 0 | 111 | 372 | 1 | 262 | 0.0 | 524 |
MS.gene68222.t1 | MTR_1g054300 | 24.207 | 347 | 207 | 10 | 60 | 370 | 156 | 482 | 8.14e-17 | 82.8 |
MS.gene68222.t1 | MTR_2g012630 | 31.373 | 204 | 123 | 7 | 172 | 375 | 31 | 217 | 4.09e-16 | 81.3 |
MS.gene68222.t1 | MTR_2g012630 | 31.373 | 204 | 123 | 7 | 172 | 375 | 31 | 217 | 5.79e-16 | 80.9 |
MS.gene68222.t1 | MTR_5g022690 | 28.139 | 231 | 143 | 9 | 150 | 377 | 273 | 483 | 6.49e-16 | 80.1 |
MS.gene68222.t1 | MTR_5g022690 | 24.201 | 219 | 152 | 4 | 57 | 275 | 271 | 475 | 4.15e-11 | 65.1 |
MS.gene68222.t1 | MTR_3g106080 | 26.894 | 264 | 168 | 7 | 61 | 314 | 415 | 663 | 1.83e-15 | 79.0 |
MS.gene68222.t1 | MTR_3g106080 | 27.064 | 218 | 139 | 7 | 151 | 367 | 414 | 612 | 6.69e-13 | 70.9 |
MS.gene68222.t1 | MTR_3g106080 | 28.571 | 217 | 130 | 8 | 110 | 324 | 422 | 615 | 1.01e-12 | 70.5 |
MS.gene68222.t1 | MTR_4g119620 | 28.571 | 224 | 144 | 7 | 148 | 367 | 19 | 230 | 3.17e-15 | 76.6 |
MS.gene68222.t1 | MTR_1g072140 | 23.102 | 303 | 208 | 6 | 59 | 353 | 21 | 306 | 5.12e-15 | 75.9 |
MS.gene68222.t1 | MTR_1g072140 | 28.251 | 223 | 143 | 7 | 57 | 275 | 103 | 312 | 1.88e-14 | 74.3 |
MS.gene68222.t1 | MTR_1g072140 | 21.600 | 250 | 175 | 6 | 40 | 284 | 44 | 277 | 8.05e-11 | 63.2 |
MS.gene68222.t1 | MTR_2g436510 | 25.225 | 222 | 147 | 7 | 150 | 371 | 164 | 366 | 1.02e-14 | 76.3 |
MS.gene68222.t1 | MTR_4g095058 | 24.725 | 364 | 213 | 16 | 35 | 371 | 206 | 535 | 2.66e-14 | 75.1 |
MS.gene68222.t1 | MTR_4g095058 | 24.793 | 242 | 147 | 10 | 60 | 287 | 325 | 545 | 1.89e-12 | 69.3 |
MS.gene68222.t1 | MTR_4g095058 | 24.725 | 364 | 213 | 16 | 35 | 371 | 204 | 533 | 2.72e-14 | 75.1 |
MS.gene68222.t1 | MTR_4g095058 | 24.793 | 242 | 147 | 10 | 60 | 287 | 323 | 543 | 1.79e-12 | 69.3 |
MS.gene68222.t1 | MTR_7g086360 | 26.496 | 234 | 153 | 7 | 151 | 383 | 50 | 265 | 3.75e-14 | 73.6 |
MS.gene68222.t1 | MTR_7g086360 | 21.786 | 280 | 195 | 8 | 61 | 334 | 51 | 312 | 1.50e-12 | 68.9 |
MS.gene68222.t1 | MTR_2g102277 | 23.529 | 255 | 178 | 4 | 68 | 322 | 60 | 297 | 7.45e-14 | 74.3 |
MS.gene68222.t1 | MTR_2g102277 | 23.529 | 255 | 178 | 4 | 68 | 322 | 60 | 297 | 8.45e-14 | 73.9 |
MS.gene68222.t1 | MTR_5g016350 | 22.599 | 354 | 214 | 14 | 47 | 371 | 154 | 476 | 8.80e-14 | 73.6 |
MS.gene68222.t1 | MTR_5g016350 | 23.967 | 242 | 149 | 9 | 60 | 287 | 266 | 486 | 9.18e-12 | 67.0 |
MS.gene68222.t1 | MTR_5g016350 | 22.599 | 354 | 214 | 14 | 47 | 371 | 218 | 540 | 2.03e-13 | 72.4 |
MS.gene68222.t1 | MTR_5g016350 | 23.967 | 242 | 149 | 9 | 60 | 287 | 330 | 550 | 1.32e-11 | 66.6 |
MS.gene68222.t1 | MTR_5g016370 | 22.792 | 351 | 215 | 13 | 47 | 371 | 232 | 552 | 2.06e-13 | 72.4 |
MS.gene68222.t1 | MTR_5g016370 | 22.407 | 241 | 152 | 9 | 60 | 286 | 342 | 561 | 1.61e-12 | 69.7 |
MS.gene68222.t1 | MTR_6g004040 | 27.027 | 259 | 159 | 10 | 122 | 378 | 32 | 262 | 3.20e-13 | 72.0 |
MS.gene68222.t1 | MTR_4g011950 | 23.137 | 255 | 179 | 4 | 68 | 322 | 60 | 297 | 3.38e-13 | 72.0 |
MS.gene68222.t1 | MTR_8g106790 | 24.251 | 334 | 212 | 11 | 60 | 372 | 10 | 323 | 8.79e-13 | 69.3 |
MS.gene68222.t1 | MTR_8g038550 | 24.497 | 298 | 196 | 11 | 73 | 367 | 191 | 462 | 1.57e-12 | 69.7 |
MS.gene68222.t1 | MTR_4g102520 | 23.197 | 319 | 221 | 10 | 58 | 371 | 287 | 586 | 2.46e-12 | 68.9 |
MS.gene68222.t1 | MTR_2g102267 | 22.957 | 257 | 179 | 5 | 59 | 314 | 53 | 291 | 7.81e-12 | 66.2 |
MS.gene68222.t1 | MTR_3g045130 | 24.419 | 258 | 169 | 8 | 113 | 369 | 278 | 510 | 8.28e-12 | 67.4 |
MS.gene68222.t1 | MTR_1g097140 | 27.451 | 255 | 161 | 9 | 110 | 363 | 83 | 314 | 1.07e-11 | 66.6 |
MS.gene68222.t1 | MTR_1g097140 | 24.679 | 312 | 203 | 10 | 61 | 369 | 119 | 401 | 5.11e-11 | 64.3 |
MS.gene68222.t1 | MTR_1g044720 | 27.451 | 204 | 127 | 9 | 122 | 324 | 237 | 420 | 2.31e-11 | 65.9 |
MS.gene68222.t1 | MTR_2g054920 | 25.600 | 250 | 144 | 6 | 60 | 275 | 56 | 297 | 2.44e-11 | 65.1 |
MS.gene68222.t1 | MTR_3g075400 | 23.779 | 307 | 207 | 9 | 57 | 360 | 217 | 499 | 7.72e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68222.t1 | AT4G34460 | 78.820 | 373 | 76 | 2 | 1 | 372 | 1 | 371 | 0.0 | 583 |
MS.gene68222.t1 | AT4G34460 | 78.552 | 373 | 72 | 3 | 1 | 372 | 1 | 366 | 0.0 | 572 |
MS.gene68222.t1 | AT4G34460 | 78.806 | 335 | 68 | 2 | 1 | 334 | 1 | 333 | 0.0 | 521 |
MS.gene68222.t1 | AT4G34460 | 79.479 | 307 | 60 | 2 | 67 | 372 | 5 | 309 | 2.77e-179 | 502 |
MS.gene68222.t1 | AT4G02730 | 25.338 | 296 | 199 | 10 | 38 | 332 | 19 | 293 | 8.96e-19 | 87.4 |
MS.gene68222.t1 | AT4G02730 | 26.147 | 218 | 145 | 6 | 150 | 367 | 37 | 238 | 7.34e-14 | 72.8 |
MS.gene68222.t1 | AT5G52820 | 23.238 | 383 | 212 | 9 | 57 | 369 | 101 | 471 | 2.94e-18 | 87.0 |
MS.gene68222.t1 | AT5G67320 | 25.876 | 371 | 207 | 15 | 33 | 366 | 226 | 565 | 1.93e-17 | 85.1 |
MS.gene68222.t1 | AT5G67320 | 22.979 | 235 | 158 | 8 | 60 | 286 | 360 | 579 | 1.41e-12 | 70.1 |
MS.gene68222.t1 | AT5G67320 | 25.957 | 235 | 141 | 8 | 150 | 369 | 259 | 475 | 3.92e-11 | 65.5 |
MS.gene68222.t1 | AT5G25150 | 27.419 | 248 | 165 | 6 | 49 | 296 | 402 | 634 | 3.33e-17 | 84.3 |
MS.gene68222.t1 | AT5G25150 | 29.388 | 245 | 145 | 8 | 151 | 394 | 413 | 630 | 1.11e-15 | 79.7 |
MS.gene68222.t1 | AT5G25150 | 27.419 | 248 | 165 | 6 | 49 | 296 | 402 | 634 | 3.41e-17 | 84.3 |
MS.gene68222.t1 | AT5G25150 | 29.388 | 245 | 145 | 8 | 151 | 394 | 413 | 630 | 1.28e-15 | 79.3 |
MS.gene68222.t1 | AT3G16650 | 27.027 | 222 | 142 | 9 | 150 | 371 | 164 | 365 | 1.89e-16 | 81.6 |
MS.gene68222.t1 | AT3G15980 | 23.273 | 275 | 188 | 7 | 52 | 323 | 2 | 256 | 5.33e-16 | 80.9 |
MS.gene68222.t1 | AT3G15980 | 23.273 | 275 | 188 | 7 | 52 | 323 | 2 | 256 | 5.40e-16 | 80.9 |
MS.gene68222.t1 | AT3G15980 | 23.273 | 275 | 188 | 7 | 52 | 323 | 2 | 256 | 5.40e-16 | 80.9 |
MS.gene68222.t1 | AT3G15980 | 23.273 | 275 | 188 | 7 | 52 | 323 | 2 | 256 | 5.40e-16 | 80.9 |
MS.gene68222.t1 | AT3G15980 | 23.273 | 275 | 188 | 7 | 52 | 323 | 2 | 256 | 5.40e-16 | 80.9 |
MS.gene68222.t1 | AT2G41500 | 26.459 | 257 | 160 | 9 | 113 | 367 | 304 | 533 | 5.50e-16 | 80.5 |
MS.gene68222.t1 | AT2G41500 | 26.459 | 257 | 160 | 9 | 113 | 367 | 304 | 533 | 5.50e-16 | 80.5 |
MS.gene68222.t1 | AT3G15980 | 23.273 | 275 | 188 | 7 | 52 | 323 | 2 | 256 | 6.11e-16 | 80.9 |
MS.gene68222.t1 | AT3G15980 | 23.273 | 275 | 188 | 7 | 52 | 323 | 2 | 256 | 6.67e-16 | 80.5 |
MS.gene68222.t1 | AT5G13480 | 26.174 | 298 | 191 | 10 | 73 | 367 | 142 | 413 | 3.45e-15 | 78.2 |
MS.gene68222.t1 | AT1G52360 | 22.909 | 275 | 189 | 7 | 52 | 323 | 2 | 256 | 3.68e-15 | 78.2 |
MS.gene68222.t1 | AT1G52360 | 22.909 | 275 | 189 | 7 | 52 | 323 | 2 | 256 | 3.99e-15 | 78.2 |
MS.gene68222.t1 | AT1G52360 | 23.529 | 255 | 178 | 4 | 68 | 322 | 60 | 297 | 1.76e-14 | 76.3 |
MS.gene68222.t1 | AT1G52360 | 22.909 | 275 | 189 | 7 | 52 | 323 | 2 | 256 | 3.99e-15 | 78.2 |
MS.gene68222.t1 | AT1G52360 | 23.529 | 255 | 178 | 4 | 68 | 322 | 60 | 297 | 1.76e-14 | 76.3 |
MS.gene68222.t1 | AT1G52360 | 22.909 | 275 | 189 | 7 | 52 | 323 | 46 | 300 | 4.11e-15 | 78.2 |
MS.gene68222.t1 | AT1G52360 | 23.529 | 255 | 178 | 4 | 68 | 322 | 104 | 341 | 1.76e-14 | 76.3 |
MS.gene68222.t1 | AT5G13480 | 26.174 | 298 | 191 | 10 | 73 | 367 | 119 | 390 | 4.36e-15 | 77.8 |
MS.gene68222.t1 | AT5G13480 | 26.174 | 298 | 191 | 10 | 73 | 367 | 119 | 390 | 4.99e-15 | 77.4 |
MS.gene68222.t1 | AT1G11160 | 31.122 | 196 | 118 | 7 | 172 | 367 | 31 | 209 | 5.38e-15 | 77.8 |
MS.gene68222.t1 | AT5G13480 | 26.174 | 298 | 191 | 10 | 73 | 367 | 131 | 402 | 5.52e-15 | 77.4 |
MS.gene68222.t1 | AT1G11160 | 31.122 | 196 | 118 | 7 | 172 | 367 | 31 | 209 | 5.97e-15 | 77.8 |
MS.gene68222.t1 | AT1G11160 | 31.122 | 196 | 118 | 7 | 172 | 367 | 31 | 209 | 6.19e-15 | 77.8 |
MS.gene68222.t1 | AT5G08390 | 28.922 | 204 | 128 | 7 | 172 | 375 | 32 | 218 | 9.07e-15 | 77.0 |
MS.gene68222.t1 | AT1G61210 | 30.612 | 196 | 119 | 7 | 172 | 367 | 31 | 209 | 1.51e-14 | 76.6 |
MS.gene68222.t1 | AT1G71840 | 25.159 | 314 | 205 | 11 | 61 | 369 | 109 | 397 | 1.90e-14 | 75.1 |
MS.gene68222.t1 | AT1G61210 | 30.612 | 196 | 119 | 7 | 172 | 367 | 31 | 209 | 1.92e-14 | 76.3 |
MS.gene68222.t1 | AT1G61210 | 30.612 | 196 | 119 | 7 | 172 | 367 | 31 | 209 | 1.99e-14 | 76.3 |
MS.gene68222.t1 | AT2G43770 | 26.496 | 234 | 153 | 7 | 151 | 383 | 48 | 263 | 3.47e-14 | 73.9 |
MS.gene68222.t1 | AT2G43770 | 21.147 | 279 | 155 | 7 | 61 | 334 | 92 | 310 | 3.81e-11 | 64.7 |
MS.gene68222.t1 | AT5G23430 | 28.922 | 204 | 128 | 7 | 172 | 375 | 32 | 218 | 4.29e-14 | 75.1 |
MS.gene68222.t1 | AT5G23430 | 24.843 | 318 | 192 | 15 | 63 | 366 | 14 | 298 | 4.49e-11 | 65.5 |
MS.gene68222.t1 | AT5G23430 | 28.922 | 204 | 128 | 7 | 172 | 375 | 32 | 218 | 4.37e-14 | 74.7 |
MS.gene68222.t1 | AT5G23430 | 24.843 | 318 | 192 | 15 | 63 | 366 | 14 | 298 | 4.90e-11 | 65.5 |
MS.gene68222.t1 | AT5G23430 | 28.922 | 204 | 128 | 7 | 172 | 375 | 32 | 218 | 4.37e-14 | 74.7 |
MS.gene68222.t1 | AT5G23430 | 24.843 | 318 | 192 | 15 | 63 | 366 | 14 | 298 | 4.90e-11 | 65.5 |
MS.gene68222.t1 | AT1G79990 | 23.137 | 255 | 179 | 4 | 68 | 322 | 60 | 297 | 4.62e-14 | 74.7 |
MS.gene68222.t1 | AT1G79990 | 23.137 | 255 | 179 | 4 | 68 | 322 | 60 | 297 | 4.80e-14 | 74.7 |
MS.gene68222.t1 | AT4G15900 | 26.126 | 222 | 145 | 8 | 150 | 371 | 170 | 372 | 6.11e-14 | 73.9 |
MS.gene68222.t1 | AT1G11160 | 30.723 | 166 | 103 | 5 | 202 | 367 | 14 | 167 | 1.05e-13 | 73.9 |
MS.gene68222.t1 | AT3G15610 | 26.855 | 283 | 160 | 8 | 60 | 308 | 56 | 325 | 2.57e-13 | 71.2 |
MS.gene68222.t1 | AT1G15470 | 27.237 | 257 | 131 | 9 | 60 | 275 | 51 | 292 | 3.50e-13 | 70.9 |
MS.gene68222.t1 | AT2G33340 | 26.246 | 301 | 143 | 14 | 122 | 371 | 237 | 509 | 3.68e-13 | 71.6 |
MS.gene68222.t1 | AT2G33340 | 26.246 | 301 | 143 | 14 | 122 | 371 | 237 | 509 | 3.68e-13 | 71.6 |
MS.gene68222.t1 | AT4G29830 | 31.183 | 186 | 104 | 8 | 97 | 276 | 152 | 319 | 9.69e-13 | 69.3 |
MS.gene68222.t1 | AT3G49660 | 24.068 | 295 | 198 | 10 | 47 | 334 | 6 | 281 | 1.50e-12 | 68.6 |
MS.gene68222.t1 | AT3G49660 | 23.502 | 217 | 155 | 4 | 59 | 275 | 107 | 312 | 4.91e-11 | 63.9 |
MS.gene68222.t1 | AT3G18130 | 23.567 | 314 | 199 | 11 | 80 | 372 | 31 | 324 | 1.60e-11 | 65.5 |
MS.gene68222.t1 | AT1G10580 | 23.975 | 317 | 213 | 11 | 60 | 369 | 277 | 572 | 1.88e-11 | 66.2 |
MS.gene68222.t1 | AT1G52730 | 26.400 | 250 | 142 | 6 | 60 | 275 | 56 | 297 | 1.91e-11 | 65.5 |
MS.gene68222.t1 | AT1G52730 | 26.400 | 250 | 142 | 6 | 60 | 275 | 56 | 297 | 1.91e-11 | 65.5 |
MS.gene68222.t1 | AT1G15470 | 25.106 | 235 | 144 | 8 | 60 | 286 | 51 | 261 | 8.17e-11 | 63.2 |
Find 96 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATGTTTGGGATACTTTAT+TGG | 0.165728 | 3.4:-99321873 | MS.gene68222:CDS |
ACTCTCAGCATTTCCATTAA+TGG | 0.169125 | 3.4:-99322214 | MS.gene68222:intron |
AGAACCAGATACAAACATTT+TGG | 0.219891 | 3.4:+99322183 | None:intergenic |
TTTGGAGTTGGATCCATTAA+TGG | 0.230052 | 3.4:+99322201 | None:intergenic |
TTTCCTGATGGAAATAGATT+TGG | 0.276868 | 3.4:-99322064 | MS.gene68222:CDS |
AACTCCAAAATGTTTGTATC+TGG | 0.288983 | 3.4:-99322187 | MS.gene68222:CDS |
TGAGGGCAGGATCACCTGTT+TGG | 0.300230 | 3.4:-99320554 | MS.gene68222:CDS |
GAAGACACTCACTTAATTAC+TGG | 0.314223 | 3.4:-99322446 | MS.gene68222:CDS |
CTTGCAGATTGTTTGACATT+AGG | 0.319869 | 3.4:-99322021 | MS.gene68222:CDS |
GGTAGAACTCCCGTTACTTT+TGG | 0.320614 | 3.4:-99323219 | MS.gene68222:CDS |
AAGTTGGGACACAAATTTAA+AGG | 0.324926 | 3.4:-99320497 | MS.gene68222:intron |
TCCGGAAGACTTCTTATTGC+TGG | 0.330505 | 3.4:-99321914 | MS.gene68222:CDS |
CAAATGGCGATTGCTATGTT+TGG | 0.331633 | 3.4:-99321886 | MS.gene68222:CDS |
AAGATGGAAGATTAATAGTA+TGG | 0.336164 | 3.4:-99322694 | MS.gene68222:CDS |
TCATCTTGTCAGTATGTTCC+AGG | 0.349435 | 3.4:-99322470 | MS.gene68222:CDS |
GAGGGCAGGATCACCTGTTT+GGG | 0.353821 | 3.4:-99320553 | MS.gene68222:CDS |
ATCTTAATTCACCCACTGAT+AGG | 0.354475 | 3.4:-99322544 | MS.gene68222:CDS |
AATAAGAAGTCTTCCGGATA+TGG | 0.370745 | 3.4:+99321919 | None:intergenic |
TTTGAAGAGATCCTAGATTC+AGG | 0.375592 | 3.4:+99320584 | None:intergenic |
CGAGCAGTACGGACATTTCA+TGG | 0.392393 | 3.4:-99322118 | MS.gene68222:CDS |
AGAACTCTCCAAGGTCATAC+TGG | 0.399531 | 3.4:-99323174 | MS.gene68222:CDS |
AAATGGCGATTGCTATGTTT+GGG | 0.404058 | 3.4:-99321885 | MS.gene68222:CDS |
TCCAGCAATAAGAAGTCTTC+CGG | 0.412039 | 3.4:+99321913 | None:intergenic |
CACACGAGTGTCCCACAATC+TGG | 0.420398 | 3.4:+99322147 | None:intergenic |
CTTATTGCTGGATATACAAA+TGG | 0.425275 | 3.4:-99321902 | MS.gene68222:CDS |
TGCTTTGTGTACAGGAAGTT+GGG | 0.428629 | 3.4:-99320512 | MS.gene68222:CDS |
TCCATTGCATTCTCCATATC+CGG | 0.434553 | 3.4:-99321932 | MS.gene68222:CDS |
AATGTTTCAAGGATGCTTAG+TGG | 0.436820 | 3.4:-99322509 | MS.gene68222:CDS |
GTGCTTTGTGTACAGGAAGT+TGG | 0.441799 | 3.4:-99320513 | MS.gene68222:CDS |
TTGTAGGTGGTCCTGAATCT+AGG | 0.445164 | 3.4:-99320595 | MS.gene68222:intron |
ATCAGCAGACAAACCCAAAC+AGG | 0.447682 | 3.4:+99320540 | None:intergenic |
CTGTATTTACTGAATGATAA+TGG | 0.447942 | 3.4:-99319064 | MS.gene68222:intron |
ACGTTCTCTGAGATTGTTGA+CGG | 0.459466 | 3.4:+99323378 | None:intergenic |
ACATGTGCTTTCTCCCCAAC+TGG | 0.465526 | 3.4:-99322614 | MS.gene68222:CDS |
TACAGGTTTACTCATTGGAT+TGG | 0.465737 | 3.4:-99322751 | MS.gene68222:intron |
GATGCTTCTGATGTTGACTT+TGG | 0.469044 | 3.4:-99318464 | MS.gene68222:CDS |
TCTGTCAAATTCTTTCCTGA+TGG | 0.470264 | 3.4:-99322076 | MS.gene68222:CDS |
GTTCCAAATCTATTTCCATC+AGG | 0.472273 | 3.4:+99322061 | None:intergenic |
TTGGGATACTTTATTGGCTA+AGG | 0.475505 | 3.4:-99321867 | MS.gene68222:intron |
CCACTCCTTGTAGGGTATTG+TGG | 0.476279 | 3.4:-99318506 | MS.gene68222:intron |
ACACAGCAGCGACAACGAAA+TGG | 0.480035 | 3.4:-99321966 | MS.gene68222:CDS |
TGTTTGGGTTTGTCTGCTGA+TGG | 0.484615 | 3.4:-99320538 | MS.gene68222:CDS |
TGCATCCAGGCGTTCATCCT+CGG | 0.490721 | 3.4:-99319133 | MS.gene68222:intron |
AGTTCTACAGCAAAGGATAT+CGG | 0.491736 | 3.4:+99323191 | None:intergenic |
ACTCACTTAATTACTGGTTC+TGG | 0.492296 | 3.4:-99322440 | MS.gene68222:CDS |
ATGCAACAGATTGACCAGTT+GGG | 0.494182 | 3.4:+99322600 | None:intergenic |
TTTGGAGGTGAATTTCAGTC+TGG | 0.494970 | 3.4:-99322365 | MS.gene68222:CDS |
TTTGGAACTGGCTCAGAAGA+TGG | 0.495617 | 3.4:-99322046 | MS.gene68222:CDS |
GATGGAAATAGATTTGGAAC+TGG | 0.496817 | 3.4:-99322058 | MS.gene68222:CDS |
CTATAAAGCTTCCTTGTGCA+TGG | 0.503577 | 3.4:-99322643 | MS.gene68222:CDS |
AACATCAGAAGCATCACTAC+TGG | 0.504542 | 3.4:+99318472 | None:intergenic |
GATGGAAGTGCTTTGTGTAC+AGG | 0.510526 | 3.4:-99320520 | MS.gene68222:CDS |
GCTGATTATATACTTGAAGT+TGG | 0.510768 | 3.4:+99321990 | None:intergenic |
ATGGGAATCTAAATGTTTCA+AGG | 0.511123 | 3.4:-99322520 | MS.gene68222:CDS |
GCGATGCGACTGCCAGATTG+TGG | 0.518560 | 3.4:-99322159 | MS.gene68222:CDS |
TTCAAAACTCTCATGAGGGC+AGG | 0.518906 | 3.4:-99320567 | MS.gene68222:CDS |
TCGGTGGGACCAAAAGTAAC+GGG | 0.529222 | 3.4:+99323210 | None:intergenic |
AAACCTTTCCAGTATGACCT+TGG | 0.530807 | 3.4:+99323166 | None:intergenic |
TCTTAATTCACCCACTGATA+GGG | 0.531433 | 3.4:-99322543 | MS.gene68222:CDS |
TCATCCTCGGATGTATTCAA+TGG | 0.538527 | 3.4:-99319120 | MS.gene68222:CDS |
CATGCAACAGATTGACCAGT+TGG | 0.543738 | 3.4:+99322599 | None:intergenic |
GACATACTGCAGATGTACTT+AGG | 0.555324 | 3.4:-99322343 | MS.gene68222:intron |
ATTCACCCACTGATAGGGAT+GGG | 0.578801 | 3.4:-99322538 | MS.gene68222:CDS |
CGATGCGACTGCCAGATTGT+GGG | 0.579543 | 3.4:-99322158 | MS.gene68222:CDS |
TGCAACAGATTGACCAGTTG+GGG | 0.579784 | 3.4:+99322601 | None:intergenic |
AGATTGTTTGACATTAGGAC+TGG | 0.580110 | 3.4:-99322016 | MS.gene68222:CDS |
GGTCAATCTGTTGCATGCGG+TGG | 0.581213 | 3.4:-99322593 | MS.gene68222:CDS |
AATTCACCCACTGATAGGGA+TGG | 0.581894 | 3.4:-99322539 | MS.gene68222:CDS |
ATTGTTAGTGCATCTCAAGA+TGG | 0.582738 | 3.4:-99322710 | MS.gene68222:CDS |
GCTGGTTATGCAAAGTCTCA+AGG | 0.587086 | 3.4:-99323240 | MS.gene68222:CDS |
TATAAAGCTTCCTTGTGCAT+GGG | 0.587824 | 3.4:-99322642 | MS.gene68222:CDS |
ATCGGTGGGACCAAAAGTAA+CGG | 0.588862 | 3.4:+99323209 | None:intergenic |
CGGACATTTCATGGGCATGA+GGG | 0.590801 | 3.4:-99322109 | MS.gene68222:CDS |
TAGATTCCCATCCCTATCAG+TGG | 0.592534 | 3.4:+99322532 | None:intergenic |
CTTTGCTGTAGAACTCTCCA+AGG | 0.594435 | 3.4:-99323183 | MS.gene68222:CDS |
GAGCAGTACGGACATTTCAT+GGG | 0.596617 | 3.4:-99322117 | MS.gene68222:CDS |
AGATTCCCATCCCTATCAGT+GGG | 0.597288 | 3.4:+99322533 | None:intergenic |
CTTGGAGAGTTCTACAGCAA+AGG | 0.598090 | 3.4:+99323184 | None:intergenic |
ATCTCTTCAAAACTCTCATG+AGG | 0.599478 | 3.4:-99320572 | MS.gene68222:CDS |
TCTCCAAGGTCATACTGGAA+AGG | 0.600548 | 3.4:-99323169 | MS.gene68222:intron |
ACGGACATTTCATGGGCATG+AGG | 0.601876 | 3.4:-99322110 | MS.gene68222:CDS |
ATTAAGTGAGTGTCTTCACC+TGG | 0.602650 | 3.4:+99322452 | None:intergenic |
AGAACGTCACATAGCTGCAA+CGG | 0.607199 | 3.4:-99323404 | MS.gene68222:CDS |
TCCGGATATGGAGAATGCAA+TGG | 0.614685 | 3.4:+99321931 | None:intergenic |
GTGTGGCAAGTCGAGCAGTA+CGG | 0.621594 | 3.4:-99322129 | MS.gene68222:CDS |
CATGTCATAACCCATGCACA+AGG | 0.635502 | 3.4:+99322632 | None:intergenic |
AAATAGAACAAACACTGTCA+AGG | 0.643390 | 3.4:+99322570 | None:intergenic |
TCTACAGCAAAGGATATCGG+TGG | 0.646947 | 3.4:+99323194 | None:intergenic |
TCTCTTCAAAACTCTCATGA+GGG | 0.650264 | 3.4:-99320571 | MS.gene68222:CDS |
AACAGATGTTCTCAGGCCAG+TGG | 0.652607 | 3.4:+99322388 | None:intergenic |
CTACAGCAAAGGATATCGGT+GGG | 0.670691 | 3.4:+99323195 | None:intergenic |
CATGCCATTGAATACATCCG+AGG | 0.674309 | 3.4:+99319116 | None:intergenic |
CAGATTGTGGGACACTCGTG+TGG | 0.674572 | 3.4:-99322146 | MS.gene68222:CDS |
GGATATGGAGAATGCAATGG+AGG | 0.676943 | 3.4:+99321934 | None:intergenic |
ACTGGTCAATCTGTTGCATG+CGG | 0.714193 | 3.4:-99322596 | MS.gene68222:CDS |
TATCTGTATCAAGAAGAGAG+AGG | 0.734700 | 3.4:+99323341 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAATAAAAGGTTAAAAT+TGG | - | chr3.4:99322270-99322289 | MS.gene68222:intron | 10.0% |
!! | TATTATTATTAAGCTAAAAT+CGG | - | chr3.4:99318931-99318950 | MS.gene68222:intron | 10.0% |
!!! | AAATTTTTTTCTTATTTTGA+AGG | - | chr3.4:99320896-99320915 | MS.gene68222:intron | 10.0% |
!!! | AATTTTTTTCTTATTTTGAA+GGG | - | chr3.4:99320897-99320916 | MS.gene68222:intron | 10.0% |
!!! | ATTTCTACTTATTATATTTT+GGG | - | chr3.4:99320169-99320188 | MS.gene68222:intron | 10.0% |
!!! | TATTTCTACTTATTATATTT+TGG | - | chr3.4:99320168-99320187 | MS.gene68222:intron | 10.0% |
!!! | TTATTAAAATAAAAAGTGTT+TGG | - | chr3.4:99321861-99321880 | MS.gene68222:intron | 10.0% |
!!! | TTTTCTTTTTTCAAAAAATA+TGG | + | chr3.4:99321063-99321082 | None:intergenic | 10.0% |
!! | AGTTAATATGAATTATTTGA+AGG | - | chr3.4:99320873-99320892 | MS.gene68222:intron | 15.0% |
!! | CATAAATACATTTATCATTT+GGG | + | chr3.4:99322027-99322046 | None:intergenic | 15.0% |
!! | TAAATATAAAATGACGTAAA+AGG | - | chr3.4:99321909-99321928 | MS.gene68222:CDS | 15.0% |
!! | TATTCAAATTTCTTCTTAAT+CGG | - | chr3.4:99318769-99318788 | MS.gene68222:intron | 15.0% |
!! | TCATAAATACATTTATCATT+TGG | + | chr3.4:99322028-99322047 | None:intergenic | 15.0% |
!!! | AAAAAGCATTATATTTATGA+TGG | - | chr3.4:99321607-99321626 | MS.gene68222:intron | 15.0% |
!!! | AAAGAATCTTATTTTCTATA+TGG | + | chr3.4:99320380-99320399 | None:intergenic | 15.0% |
!!! | AAGAATCTTATTTTCTATAT+GGG | + | chr3.4:99320379-99320398 | None:intergenic | 15.0% |
!!! | ATATTTTTGTTATAAAAGAG+AGG | + | chr3.4:99322956-99322975 | None:intergenic | 15.0% |
!!! | TAATTCCTAATTCTTTTTAA+AGG | + | chr3.4:99321577-99321596 | None:intergenic | 15.0% |
!!! | TATTTTTGTTATAAAAGAGA+GGG | + | chr3.4:99322955-99322974 | None:intergenic | 15.0% |
!!! | TTAAACCTTTAAAAAGAATT+AGG | - | chr3.4:99321569-99321588 | MS.gene68222:intron | 15.0% |
!!! | TTGATAATATTACTATACTA+TGG | - | chr3.4:99323088-99323107 | MS.gene68222:intron | 15.0% |
!! | AGAAAATTTGAAAAAGATTG+TGG | - | chr3.4:99322173-99322192 | MS.gene68222:CDS | 20.0% |
!! | ATCTTTGTTGCTATAATATA+AGG | - | chr3.4:99318961-99318980 | MS.gene68222:intron | 20.0% |
!! | GAAAATTTGAAAAAGATTGT+GGG | - | chr3.4:99322174-99322193 | MS.gene68222:CDS | 20.0% |
!! | GATTATGTAAAACAAAAGTA+GGG | - | chr3.4:99320028-99320047 | MS.gene68222:intron | 20.0% |
!! | GCATTATCTTGTATATAAAT+TGG | - | chr3.4:99320713-99320732 | MS.gene68222:intron | 20.0% |
!! | TATTTGATACAAATATGCAT+TGG | + | chr3.4:99323117-99323136 | None:intergenic | 20.0% |
!! | TCTATCTAGAAAAAATGTTT+AGG | - | chr3.4:99323209-99323228 | MS.gene68222:CDS | 20.0% |
!! | TCTTTGTTGCTATAATATAA+GGG | - | chr3.4:99318962-99318981 | MS.gene68222:intron | 20.0% |
!! | TGATTATGTAAAACAAAAGT+AGG | - | chr3.4:99320027-99320046 | MS.gene68222:intron | 20.0% |
!! | TTGTATCAAATAATATATCC+AGG | - | chr3.4:99323125-99323144 | MS.gene68222:intron | 20.0% |
!!! | AAACATTTTTTCTAGATAGA+CGG | + | chr3.4:99323209-99323228 | None:intergenic | 20.0% |
!!! | ACAGAATCTTATTTTCTATA+TGG | + | chr3.4:99320532-99320551 | None:intergenic | 20.0% |
!!! | AGCATTCATTTAAATTTTAC+AGG | - | chr3.4:99319086-99319105 | MS.gene68222:CDS | 20.0% |
!!! | CAGAATCTTATTTTCTATAT+GGG | + | chr3.4:99320531-99320550 | None:intergenic | 20.0% |
!!! | GATTTCACTGATTAAATATA+TGG | - | chr3.4:99323164-99323183 | MS.gene68222:intron | 20.0% |
!!! | GTAGTTTTTTTTTTAAACGT+GGG | - | chr3.4:99322196-99322215 | MS.gene68222:CDS | 20.0% |
! | AAAAATATGATACCAACTTC+AGG | + | chr3.4:99322513-99322532 | None:intergenic | 25.0% |
! | AAAATATGATACCAACTTCA+GGG | + | chr3.4:99322512-99322531 | None:intergenic | 25.0% |
! | AAAATTGAAGGTTTATCTTC+TGG | - | chr3.4:99320920-99320939 | MS.gene68222:intron | 25.0% |
! | AACCAAAAAATTTACCACTA+AGG | + | chr3.4:99322472-99322491 | None:intergenic | 25.0% |
! | AAGATGGAAGATTAATAGTA+TGG | - | chr3.4:99319160-99319179 | MS.gene68222:intron | 25.0% |
! | ACTGATTAAATATATGGATG+TGG | - | chr3.4:99323170-99323189 | MS.gene68222:CDS | 25.0% |
! | AGATCTATATGAAAATCAGT+TGG | - | chr3.4:99319562-99319581 | MS.gene68222:intron | 25.0% |
! | AGTATATTAAATCTCAGACT+TGG | - | chr3.4:99321029-99321048 | MS.gene68222:intron | 25.0% |
! | ATACTCCTAGTCTATATTAA+TGG | + | chr3.4:99321014-99321033 | None:intergenic | 25.0% |
! | CGTAAAATTGAAGTTAGTTA+CGG | + | chr3.4:99318828-99318847 | None:intergenic | 25.0% |
! | CTAATGCTTCATTTCATTAA+GGG | - | chr3.4:99318863-99318882 | MS.gene68222:intron | 25.0% |
! | CTGTATTTACTGAATGATAA+TGG | - | chr3.4:99322790-99322809 | MS.gene68222:intron | 25.0% |
! | GATCTATATGAAAATCAGTT+GGG | - | chr3.4:99319563-99319582 | MS.gene68222:intron | 25.0% |
! | GTCTGATACATAAAACTTAT+AGG | - | chr3.4:99321395-99321414 | MS.gene68222:intron | 25.0% |
! | GTGGAATAACATAAAACAAA+AGG | - | chr3.4:99322835-99322854 | MS.gene68222:intron | 25.0% |
! | TACTCCTAGTCTATATTAAT+GGG | + | chr3.4:99321013-99321032 | None:intergenic | 25.0% |
! | TATAGGTTATGTGTGATATA+GGG | - | chr3.4:99321412-99321431 | MS.gene68222:intron | 25.0% |
! | TTAAAGTAGTAACTTTGACT+TGG | + | chr3.4:99320342-99320361 | None:intergenic | 25.0% |
! | TTATAGGTTATGTGTGATAT+AGG | - | chr3.4:99321411-99321430 | MS.gene68222:intron | 25.0% |
!! | AATTTTACAGGTTTACTCAT+TGG | - | chr3.4:99319098-99319117 | MS.gene68222:CDS | 25.0% |
!! | CGTAACTAACTTCAATTTTA+CGG | - | chr3.4:99318826-99318845 | MS.gene68222:intron | 25.0% |
!! | TGATCAAACATGTGTTTTAT+GGG | - | chr3.4:99319437-99319456 | MS.gene68222:intron | 25.0% |
!! | TTCATATTAACTCCTTTTAC+TGG | + | chr3.4:99320865-99320884 | None:intergenic | 25.0% |
!!! | ATTTTATTTCGAAAGGTAGT+TGG | - | chr3.4:99320194-99320213 | MS.gene68222:intron | 25.0% |
!!! | GATTGAACTTTTAAAGAACT+AGG | - | chr3.4:99321514-99321533 | MS.gene68222:intron | 25.0% |
!!! | GGTAGTTTTTTTTTTAAACG+TGG | - | chr3.4:99322195-99322214 | MS.gene68222:CDS | 25.0% |
!!! | GGTTGAGATTTTTCTTATTT+TGG | - | chr3.4:99320941-99320960 | MS.gene68222:intron | 25.0% |
!!! | TATTTTGAAGGGAAAATTGA+AGG | - | chr3.4:99320908-99320927 | MS.gene68222:intron | 25.0% |
!!! | TTCTTATTTTGGAAAAAGAC+AGG | - | chr3.4:99320952-99320971 | MS.gene68222:intron | 25.0% |
!!! | TTTTTAAAGGTTTAACCTTC+AGG | + | chr3.4:99321564-99321583 | None:intergenic | 25.0% |
AAATAGAACAAACACTGTCA+AGG | + | chr3.4:99319287-99319306 | None:intergenic | 30.0% | |
AACTCCAAAATGTTTGTATC+TGG | - | chr3.4:99319667-99319686 | MS.gene68222:intron | 30.0% | |
AACTCCCATTAATATAGACT+AGG | - | chr3.4:99321006-99321025 | MS.gene68222:intron | 30.0% | |
AAGTTGGGACACAAATTTAA+AGG | - | chr3.4:99321357-99321376 | MS.gene68222:intron | 30.0% | |
AATCTTCTGGTCATAATACT+GGG | - | chr3.4:99321716-99321735 | MS.gene68222:intron | 30.0% | |
ACTGAACACAAATTAATGGT+TGG | + | chr3.4:99318797-99318816 | None:intergenic | 30.0% | |
ATAGAAACTAAACATGCTGT+TGG | + | chr3.4:99320563-99320582 | None:intergenic | 30.0% | |
ATAGGTTATGTGTGATATAG+GGG | - | chr3.4:99321413-99321432 | MS.gene68222:intron | 30.0% | |
ATATAAGGGAATTGCTGTAT+TGG | - | chr3.4:99318976-99318995 | MS.gene68222:intron | 30.0% | |
ATGGGAATCTAAATGTTTCA+AGG | - | chr3.4:99319334-99319353 | MS.gene68222:intron | 30.0% | |
CAAGAGCAAGTACAAATAAA+TGG | + | chr3.4:99321164-99321183 | None:intergenic | 30.0% | |
CTCATCATGATTAATAGACT+CGG | + | chr3.4:99320685-99320704 | None:intergenic | 30.0% | |
CTGAACTGAACACAAATTAA+TGG | + | chr3.4:99318801-99318820 | None:intergenic | 30.0% | |
CTTATTGCTGGATATACAAA+TGG | - | chr3.4:99319952-99319971 | MS.gene68222:intron | 30.0% | |
GCTAATGCTTCATTTCATTA+AGG | - | chr3.4:99318862-99318881 | MS.gene68222:intron | 30.0% | |
GCTGATTATATACTTGAAGT+TGG | + | chr3.4:99319867-99319886 | None:intergenic | 30.0% | |
TAGTCTATATTAATGGGAGT+TGG | + | chr3.4:99321007-99321026 | None:intergenic | 30.0% | |
TAGTTTATAAGCTTTCCTGA+AGG | - | chr3.4:99321546-99321565 | MS.gene68222:intron | 30.0% | |
TATAAAAGCTCCACATCAAA+AGG | + | chr3.4:99320776-99320795 | None:intergenic | 30.0% | |
TATAAGGGAATTGCTGTATT+GGG | - | chr3.4:99318977-99318996 | MS.gene68222:intron | 30.0% | |
TTACTTCTACATGCGATTTA+GGG | - | chr3.4:99320603-99320622 | MS.gene68222:intron | 30.0% | |
TTGAAGCTAACTTCCAAAAT+TGG | + | chr3.4:99321446-99321465 | None:intergenic | 30.0% | |
TTGCTTCTTCATTTGATTGT+AGG | - | chr3.4:99321243-99321262 | MS.gene68222:intron | 30.0% | |
TTTACTTCTACATGCGATTT+AGG | - | chr3.4:99320602-99320621 | MS.gene68222:intron | 30.0% | |
TTTCCTGATGGAAATAGATT+TGG | - | chr3.4:99319790-99319809 | MS.gene68222:intron | 30.0% | |
! | ACACTTTTGGCAAAGATAAT+TGG | - | chr3.4:99320109-99320128 | MS.gene68222:intron | 30.0% |
! | AGAACCAGATACAAACATTT+TGG | + | chr3.4:99319674-99319693 | None:intergenic | 30.0% |
! | CTATGTTTGGGATACTTTAT+TGG | - | chr3.4:99319981-99320000 | MS.gene68222:intron | 30.0% |
! | GTGATCAAACATGTGTTTTA+TGG | - | chr3.4:99319436-99319455 | MS.gene68222:intron | 30.0% |
! | TACTATGTTTGCAACACTTT+TGG | - | chr3.4:99320096-99320115 | MS.gene68222:intron | 30.0% |
! | TAGAAATGTCGAAAGCATAA+TGG | + | chr3.4:99320642-99320661 | None:intergenic | 30.0% |
! | TTTGTTATAAAAGAGAGGGA+AGG | + | chr3.4:99322951-99322970 | None:intergenic | 30.0% |
!! | AATGATAATGGTGAGCTAAA+AGG | - | chr3.4:99322802-99322821 | MS.gene68222:intron | 30.0% |
!! | ATCCTAAAGGAAGTATGTTT+TGG | + | chr3.4:99321674-99321693 | None:intergenic | 30.0% |
!! | TACTTCCTTTAGGATTGTTA+AGG | - | chr3.4:99321679-99321698 | MS.gene68222:intron | 30.0% |
!! | TGTTGACTTTGGTCAAAAAT+TGG | - | chr3.4:99323401-99323420 | MS.gene68222:CDS | 30.0% |
!! | TTGGGAGATTTTATTTCGAA+AGG | - | chr3.4:99320187-99320206 | MS.gene68222:intron | 30.0% |
!!! | AGATACAAACATTTTGGAGT+TGG | + | chr3.4:99319668-99319687 | None:intergenic | 30.0% |
!!! | AGCCTTAGTGGTAAATTTTT+TGG | - | chr3.4:99322467-99322486 | MS.gene68222:CDS | 30.0% |
!!! | GGGCATAGTTTTTTTTAGTA+TGG | - | chr3.4:99319583-99319602 | MS.gene68222:intron | 30.0% |
AAATGGCGATTGCTATGTTT+GGG | - | chr3.4:99319969-99319988 | MS.gene68222:intron | 35.0% | |
AAGGTCCTTAACAATCCTAA+AGG | + | chr3.4:99321687-99321706 | None:intergenic | 35.0% | |
AATAAGAAGTCTTCCGGATA+TGG | + | chr3.4:99319938-99319957 | None:intergenic | 35.0% | |
AATGTTTCAAGGATGCTTAG+TGG | - | chr3.4:99319345-99319364 | MS.gene68222:intron | 35.0% | |
ACTCTCAGCATTTCCATTAA+TGG | - | chr3.4:99319640-99319659 | MS.gene68222:intron | 35.0% | |
AGATTGTTTGACATTAGGAC+TGG | - | chr3.4:99319838-99319857 | MS.gene68222:intron | 35.0% | |
AGTTCTACAGCAAAGGATAT+CGG | + | chr3.4:99318666-99318685 | None:intergenic | 35.0% | |
AGTTTCGTCAATTGTGTTGA+GGG | + | chr3.4:99322650-99322669 | None:intergenic | 35.0% | |
ATACTTTGACTCCTTTGTCA+GGG | - | chr3.4:99323325-99323344 | MS.gene68222:intron | 35.0% | |
ATCATGATTAATAGACTCGG+AGG | + | chr3.4:99320682-99320701 | None:intergenic | 35.0% | |
ATCTCTTCAAAACTCTCATG+AGG | - | chr3.4:99321282-99321301 | MS.gene68222:intron | 35.0% | |
ATCTTAATTCACCCACTGAT+AGG | - | chr3.4:99319310-99319329 | MS.gene68222:intron | 35.0% | |
ATTGAGTCAATGCTGTTAGT+TGG | + | chr3.4:99322922-99322941 | None:intergenic | 35.0% | |
ATTGTTAGTGCATCTCAAGA+TGG | - | chr3.4:99319144-99319163 | MS.gene68222:intron | 35.0% | |
CAATCCTACAATCATTCTAG+TGG | + | chr3.4:99321499-99321518 | None:intergenic | 35.0% | |
CAATTTCTCTTTGTAGTTGC+TGG | - | chr3.4:99318596-99318615 | MS.gene68222:intron | 35.0% | |
CATGTTAGACAAACCCATAT+AGG | + | chr3.4:99320233-99320252 | None:intergenic | 35.0% | |
CCAGAAGATTCATTTATGCA+AGG | + | chr3.4:99321706-99321725 | None:intergenic | 35.0% | |
CCTTGCATAAATGAATCTTC+TGG | - | chr3.4:99321703-99321722 | MS.gene68222:intron | 35.0% | |
CTCCAAAACATACTTCCTTT+AGG | - | chr3.4:99321669-99321688 | MS.gene68222:intron | 35.0% | |
CTTCTTCATTTGATTGTAGG+TGG | - | chr3.4:99321246-99321265 | MS.gene68222:intron | 35.0% | |
CTTGCAGATTGTTTGACATT+AGG | - | chr3.4:99319833-99319852 | MS.gene68222:intron | 35.0% | |
GAAGACACTCACTTAATTAC+TGG | - | chr3.4:99319408-99319427 | MS.gene68222:intron | 35.0% | |
GAATCTTCTGGTCATAATAC+TGG | - | chr3.4:99321715-99321734 | MS.gene68222:intron | 35.0% | |
GCTTTCGACATTTCTATATG+TGG | - | chr3.4:99320646-99320665 | MS.gene68222:intron | 35.0% | |
GGGCAATTGAATAAGAATGT+GGG | - | chr3.4:99322216-99322235 | MS.gene68222:intron | 35.0% | |
GGTAAAATTAGCTGTTCAAG+TGG | - | chr3.4:99321882-99321901 | MS.gene68222:CDS | 35.0% | |
GTTCCAAATCTATTTCCATC+AGG | + | chr3.4:99319796-99319815 | None:intergenic | 35.0% | |
TACAGGTTTACTCATTGGAT+TGG | - | chr3.4:99319103-99319122 | MS.gene68222:CDS | 35.0% | |
TACCACGATGTGTTAAATTG+AGG | + | chr3.4:99318729-99318748 | None:intergenic | 35.0% | |
TACTTCTACATGCGATTTAG+GGG | - | chr3.4:99320604-99320623 | MS.gene68222:intron | 35.0% | |
TACTTGCATCTTGCAGATAT+GGG | - | chr3.4:99323249-99323268 | MS.gene68222:intron | 35.0% | |
TAGGTTATGTGTGATATAGG+GGG | - | chr3.4:99321414-99321433 | MS.gene68222:intron | 35.0% | |
TATAAAGCTTCCTTGTGCAT+GGG | - | chr3.4:99319212-99319231 | MS.gene68222:intron | 35.0% | |
TATCTGTATCAAGAAGAGAG+AGG | + | chr3.4:99318516-99318535 | None:intergenic | 35.0% | |
TCTCTTCAAAACTCTCATGA+GGG | - | chr3.4:99321283-99321302 | MS.gene68222:intron | 35.0% | |
TCTGTCAAATTCTTTCCTGA+TGG | - | chr3.4:99319778-99319797 | MS.gene68222:intron | 35.0% | |
TCTTAATTCACCCACTGATA+GGG | - | chr3.4:99319311-99319330 | MS.gene68222:intron | 35.0% | |
TGAGCTAAAAGGTTCTACTA+TGG | - | chr3.4:99322813-99322832 | MS.gene68222:intron | 35.0% | |
TGCTTTAGTGTGTCCTATAT+GGG | - | chr3.4:99320217-99320236 | MS.gene68222:intron | 35.0% | |
TGGGCAATTGAATAAGAATG+TGG | - | chr3.4:99322215-99322234 | MS.gene68222:intron | 35.0% | |
TTAATCATGATGAGCTCACT+AGG | - | chr3.4:99320691-99320710 | MS.gene68222:intron | 35.0% | |
TTACTGACAATAGTTGCACT+AGG | + | chr3.4:99321203-99321222 | None:intergenic | 35.0% | |
TTACTTGCATCTTGCAGATA+TGG | - | chr3.4:99323248-99323267 | MS.gene68222:intron | 35.0% | |
TTCCTCAATTTAACACATCG+TGG | - | chr3.4:99318724-99318743 | MS.gene68222:intron | 35.0% | |
TTCGACATTTCTATATGTGG+TGG | - | chr3.4:99320649-99320668 | MS.gene68222:intron | 35.0% | |
TTTAACCTGAAATGACAGCA+GGG | - | chr3.4:99320140-99320159 | MS.gene68222:intron | 35.0% | |
TTTGAAGAGATCCTAGATTC+AGG | + | chr3.4:99321273-99321292 | None:intergenic | 35.0% | |
TTTGGAAAAAGACAGGAGAA+GGG | - | chr3.4:99320959-99320978 | MS.gene68222:intron | 35.0% | |
! | CTAGAAGATTCTAGAAGAGA+GGG | + | chr3.4:99323015-99323034 | None:intergenic | 35.0% |
! | GATGGAAATAGATTTGGAAC+TGG | - | chr3.4:99319796-99319815 | MS.gene68222:intron | 35.0% |
! | GCTTTATAGCATGAGTTTTC+TGG | + | chr3.4:99319200-99319219 | None:intergenic | 35.0% |
! | GTTTTATGGGATATTACCAC+TGG | - | chr3.4:99319450-99319469 | MS.gene68222:intron | 35.0% |
! | TATCACAATGCCTTTTGATG+TGG | - | chr3.4:99320763-99320782 | MS.gene68222:intron | 35.0% |
! | TTGGAAGTTAGCTTCAATGT+TGG | - | chr3.4:99321449-99321468 | MS.gene68222:intron | 35.0% |
! | TTGGGATACTTTATTGGCTA+AGG | - | chr3.4:99319987-99320006 | MS.gene68222:intron | 35.0% |
! | TTTGGAGTTGGATCCATTAA+TGG | + | chr3.4:99319656-99319675 | None:intergenic | 35.0% |
! | TTTTACTGGCCCATAAAACA+AGG | + | chr3.4:99320851-99320870 | None:intergenic | 35.0% |
!! | ACTCACTTAATTACTGGTTC+TGG | - | chr3.4:99319414-99319433 | MS.gene68222:intron | 35.0% |
!! | TTCTAGAATCTTCTAGCATG+TGG | - | chr3.4:99323019-99323038 | MS.gene68222:intron | 35.0% |
!! | TTGTTTTATGGGCCAGTAAA+AGG | - | chr3.4:99320850-99320869 | MS.gene68222:intron | 35.0% |
!! | TTTTGGAAAAAGACAGGAGA+AGG | - | chr3.4:99320958-99320977 | MS.gene68222:intron | 35.0% |
!!! | GTAGCTTTTTAGCTTATAGC+TGG | + | chr3.4:99322315-99322334 | None:intergenic | 35.0% |
!!! | TGCCTAAGACCTTGTTTTAT+GGG | - | chr3.4:99320839-99320858 | MS.gene68222:intron | 35.0% |
!!! | TTGCCTAAGACCTTGTTTTA+TGG | - | chr3.4:99320838-99320857 | MS.gene68222:intron | 35.0% |
AAACCTTTCCAGTATGACCT+TGG | + | chr3.4:99318691-99318710 | None:intergenic | 40.0% | |
AGAATGTGTCCAATCGTTTG+AGG | + | chr3.4:99322675-99322694 | None:intergenic | 40.0% | |
ATCTTGCAGATATGGGCATT+TGG | - | chr3.4:99323256-99323275 | MS.gene68222:intron | 40.0% | |
ATGAACCACAATACCCTACA+AGG | + | chr3.4:99323356-99323375 | None:intergenic | 40.0% | |
ATGCAACAGATTGACCAGTT+GGG | + | chr3.4:99319257-99319276 | None:intergenic | 40.0% | |
ATTAAGTGAGTGTCTTCACC+TGG | + | chr3.4:99319405-99319424 | None:intergenic | 40.0% | |
CAAATGGCGATTGCTATGTT+TGG | - | chr3.4:99319968-99319987 | MS.gene68222:intron | 40.0% | |
CATACTTTGACTCCTTTGTC+AGG | - | chr3.4:99323324-99323343 | MS.gene68222:intron | 40.0% | |
CCTAGAATTGTCTCACTGAT+AGG | - | chr3.4:99322548-99322567 | MS.gene68222:CDS | 40.0% | |
CCTATCAGTGAGACAATTCT+AGG | + | chr3.4:99322551-99322570 | None:intergenic | 40.0% | |
CTATAAAGCTTCCTTGTGCA+TGG | - | chr3.4:99319211-99319230 | MS.gene68222:intron | 40.0% | |
CTCCAAAAACAGATGTTCTC+AGG | + | chr3.4:99319476-99319495 | None:intergenic | 40.0% | |
GACATACTGCAGATGTACTT+AGG | - | chr3.4:99319511-99319530 | MS.gene68222:intron | 40.0% | |
GAGTTTCGTCAATTGTGTTG+AGG | + | chr3.4:99322651-99322670 | None:intergenic | 40.0% | |
GATGCATTGGAAGCAAGATT+GGG | + | chr3.4:99322707-99322726 | None:intergenic | 40.0% | |
GCTAAAAGGTTCTACTATGG+TGG | - | chr3.4:99322816-99322835 | MS.gene68222:intron | 40.0% | |
GGATGAAAACGTGATGTGTT+TGG | + | chr3.4:99322388-99322407 | None:intergenic | 40.0% | |
GTATGAGTCTTTACCCCATA+TGG | + | chr3.4:99323309-99323328 | None:intergenic | 40.0% | |
GTGATTTGAGCCATCCATAT+GGG | - | chr3.4:99323292-99323311 | MS.gene68222:intron | 40.0% | |
GTGCTTTAGTGTGTCCTATA+TGG | - | chr3.4:99320216-99320235 | MS.gene68222:intron | 40.0% | |
GTTTAACCTGAAATGACAGC+AGG | - | chr3.4:99320139-99320158 | MS.gene68222:intron | 40.0% | |
TACGCCACTAGAATGATTGT+AGG | - | chr3.4:99321492-99321511 | MS.gene68222:intron | 40.0% | |
TACTTGCTCTTGTACTTGTG+TGG | - | chr3.4:99321172-99321191 | MS.gene68222:intron | 40.0% | |
TAGTAAGTGATAAGACACCG+AGG | + | chr3.4:99323049-99323068 | None:intergenic | 40.0% | |
TCATCCTCGGATGTATTCAA+TGG | - | chr3.4:99322734-99322753 | MS.gene68222:CDS | 40.0% | |
TCATCTTGTCAGTATGTTCC+AGG | - | chr3.4:99319384-99319403 | MS.gene68222:intron | 40.0% | |
TCCAGCAATAAGAAGTCTTC+CGG | + | chr3.4:99319944-99319963 | None:intergenic | 40.0% | |
TCCATTGCATTCTCCATATC+CGG | - | chr3.4:99319922-99319941 | MS.gene68222:intron | 40.0% | |
TGATTTGAGCCATCCATATG+GGG | - | chr3.4:99323293-99323312 | MS.gene68222:intron | 40.0% | |
TGCTTTGTGTACAGGAAGTT+GGG | - | chr3.4:99321342-99321361 | MS.gene68222:intron | 40.0% | |
TTACCAAACACACCCTAACT+TGG | + | chr3.4:99321749-99321768 | None:intergenic | 40.0% | |
TTTACCAAACACAGCCTTAG+TGG | - | chr3.4:99322455-99322474 | MS.gene68222:CDS | 40.0% | |
TTTACCACTAAGGCTGTGTT+TGG | + | chr3.4:99322462-99322481 | None:intergenic | 40.0% | |
TTTGGAGGTGAATTTCAGTC+TGG | - | chr3.4:99319489-99319508 | MS.gene68222:intron | 40.0% | |
! | AAGGCACATTCTAGAAGAGA+GGG | - | chr3.4:99322581-99322600 | MS.gene68222:CDS | 40.0% |
! | GCTAGAAGATTCTAGAAGAG+AGG | + | chr3.4:99323016-99323035 | None:intergenic | 40.0% |
!! | AACATCAGAAGCATCACTAC+TGG | + | chr3.4:99323385-99323404 | None:intergenic | 40.0% |
!! | ACGTTCTCTGAGATTGTTGA+CGG | + | chr3.4:99318479-99318498 | None:intergenic | 40.0% |
!! | ATTCTAGGACAAAACAGCTG+AGG | + | chr3.4:99322536-99322555 | None:intergenic | 40.0% |
!! | GATGCTTCTGATGTTGACTT+TGG | - | chr3.4:99323390-99323409 | MS.gene68222:CDS | 40.0% |
!! | TAGTTAGGAGTATTGTGCTC+TGG | + | chr3.4:99322886-99322905 | None:intergenic | 40.0% |
!!! | CTGAGAACATCTGTTTTTGG+AGG | - | chr3.4:99319474-99319493 | MS.gene68222:intron | 40.0% |
AAAAGCTAGCTGGTAGCTGA+TGG | - | chr3.4:99321804-99321823 | MS.gene68222:intron | 45.0% | |
AAGGGAGGCTGAAAAAGAGT+GGG | - | chr3.4:99320977-99320996 | MS.gene68222:intron | 45.0% | |
AATTCACCCACTGATAGGGA+TGG | - | chr3.4:99319315-99319334 | MS.gene68222:intron | 45.0% | |
ACTGATAGGACATCTAGGCA+AGG | - | chr3.4:99322562-99322581 | MS.gene68222:CDS | 45.0% | |
ACTGGTCAATCTGTTGCATG+CGG | - | chr3.4:99319258-99319277 | MS.gene68222:intron | 45.0% | |
AGAACGTCACATAGCTGCAA+CGG | - | chr3.4:99318450-99318469 | MS.gene68222:CDS | 45.0% | |
AGAACTCTCCAAGGTCATAC+TGG | - | chr3.4:99318680-99318699 | MS.gene68222:intron | 45.0% | |
AGATTCCCATCCCTATCAGT+GGG | + | chr3.4:99319324-99319343 | None:intergenic | 45.0% | |
ATCAGCAGACAAACCCAAAC+AGG | + | chr3.4:99321317-99321336 | None:intergenic | 45.0% | |
ATCATGTTCTGCCCTGAAGT+TGG | - | chr3.4:99322498-99322517 | MS.gene68222:CDS | 45.0% | |
ATCGGTGGGACCAAAAGTAA+CGG | + | chr3.4:99318648-99318667 | None:intergenic | 45.0% | |
ATCTTGCTTCCAATGCATCC+AGG | - | chr3.4:99322708-99322727 | MS.gene68222:CDS | 45.0% | |
ATTCACCCACTGATAGGGAT+GGG | - | chr3.4:99319316-99319335 | MS.gene68222:intron | 45.0% | |
CATGCAACAGATTGACCAGT+TGG | + | chr3.4:99319258-99319277 | None:intergenic | 45.0% | |
CATGCCATTGAATACATCCG+AGG | + | chr3.4:99322741-99322760 | None:intergenic | 45.0% | |
CATGTCATAACCCATGCACA+AGG | + | chr3.4:99319225-99319244 | None:intergenic | 45.0% | |
CTACAGCAAAGGATATCGGT+GGG | + | chr3.4:99318662-99318681 | None:intergenic | 45.0% | |
CTGATAGCTGAAAAGCTAGC+TGG | - | chr3.4:99321794-99321813 | MS.gene68222:intron | 45.0% | |
CTTGGAGAGTTCTACAGCAA+AGG | + | chr3.4:99318673-99318692 | None:intergenic | 45.0% | |
GAGCAGTACGGACATTTCAT+GGG | - | chr3.4:99319737-99319756 | MS.gene68222:intron | 45.0% | |
GAGTCTTTACCCCATATGGA+TGG | + | chr3.4:99323305-99323324 | None:intergenic | 45.0% | |
GCTGGTTATGCAAAGTCTCA+AGG | - | chr3.4:99318614-99318633 | MS.gene68222:intron | 45.0% | |
GGAGAGGTTTCTCTCTAGTT+AGG | + | chr3.4:99322901-99322920 | None:intergenic | 45.0% | |
GGATATGGAGAATGCAATGG+AGG | + | chr3.4:99319923-99319942 | None:intergenic | 45.0% | |
GGATGCATTGGAAGCAAGAT+TGG | + | chr3.4:99322708-99322727 | None:intergenic | 45.0% | |
GGCCCATAAAACAAGGTCTT+AGG | + | chr3.4:99320844-99320863 | None:intergenic | 45.0% | |
GGTGATTTGAGCCATCCATA+TGG | - | chr3.4:99323291-99323310 | MS.gene68222:intron | 45.0% | |
GTCAATGCTGTTAGTTGGAG+AGG | + | chr3.4:99322917-99322936 | None:intergenic | 45.0% | |
GTCTCACTGATAGGACATCT+AGG | - | chr3.4:99322557-99322576 | MS.gene68222:CDS | 45.0% | |
GTGCTTTGTGTACAGGAAGT+TGG | - | chr3.4:99321341-99321360 | MS.gene68222:intron | 45.0% | |
GTTATGTGTGATATAGGGGG+TGG | - | chr3.4:99321417-99321436 | MS.gene68222:intron | 45.0% | |
GTTCCAAGTTAGGGTGTGTT+TGG | - | chr3.4:99321743-99321762 | MS.gene68222:intron | 45.0% | |
TAGATTCCCATCCCTATCAG+TGG | + | chr3.4:99319325-99319344 | None:intergenic | 45.0% | |
TAGTAATCCCCAGTTCACTG+TGG | + | chr3.4:99320081-99320100 | None:intergenic | 45.0% | |
TCCGGAAGACTTCTTATTGC+TGG | - | chr3.4:99319940-99319959 | MS.gene68222:intron | 45.0% | |
TCCGGATATGGAGAATGCAA+TGG | + | chr3.4:99319926-99319945 | None:intergenic | 45.0% | |
TCTACAGCAAAGGATATCGG+TGG | + | chr3.4:99318663-99318682 | None:intergenic | 45.0% | |
TCTCCAAGGTCATACTGGAA+AGG | - | chr3.4:99318685-99318704 | MS.gene68222:intron | 45.0% | |
TGCAACAGATTGACCAGTTG+GGG | + | chr3.4:99319256-99319275 | None:intergenic | 45.0% | |
TGCAGATATGGGCATTTGGA+GGG | - | chr3.4:99323260-99323279 | MS.gene68222:intron | 45.0% | |
TTCAAAACTCTCATGAGGGC+AGG | - | chr3.4:99321287-99321306 | MS.gene68222:intron | 45.0% | |
TTGCAGATATGGGCATTTGG+AGG | - | chr3.4:99323259-99323278 | MS.gene68222:intron | 45.0% | |
TTGTAGGTGGTCCTGAATCT+AGG | - | chr3.4:99321259-99321278 | MS.gene68222:intron | 45.0% | |
! | AAACACCCTGCTGTCATTTC+AGG | + | chr3.4:99320148-99320167 | None:intergenic | 45.0% |
! | ACTGGGACTTGTTCCAAGTT+AGG | - | chr3.4:99321733-99321752 | MS.gene68222:intron | 45.0% |
! | CAAGGCACATTCTAGAAGAG+AGG | - | chr3.4:99322580-99322599 | MS.gene68222:CDS | 45.0% |
! | CTGGGACTTGTTCCAAGTTA+GGG | - | chr3.4:99321734-99321753 | MS.gene68222:intron | 45.0% |
! | CTTTGCTGTAGAACTCTCCA+AGG | - | chr3.4:99318671-99318690 | MS.gene68222:intron | 45.0% |
! | GGCCTGAGAACATCTGTTTT+TGG | - | chr3.4:99319471-99319490 | MS.gene68222:intron | 45.0% |
! | TAAGAGTACGCACGCAATTG+CGG | - | chr3.4:99318895-99318914 | MS.gene68222:intron | 45.0% |
! | TAGGGGGTGGTTACCAATTT+TGG | - | chr3.4:99321430-99321449 | MS.gene68222:intron | 45.0% |
! | TGTTTGGGTTTGTCTGCTGA+TGG | - | chr3.4:99321316-99321335 | MS.gene68222:intron | 45.0% |
! | TTTGGAACTGGCTCAGAAGA+TGG | - | chr3.4:99319808-99319827 | MS.gene68222:intron | 45.0% |
!! | GATGGAAGTGCTTTGTGTAC+AGG | - | chr3.4:99321334-99321353 | MS.gene68222:intron | 45.0% |
!! | GGACTAGCTTATAAGCTCGT+TGG | + | chr3.4:99322409-99322428 | None:intergenic | 45.0% |
!! | GGTAGAACTCCCGTTACTTT+TGG | - | chr3.4:99318635-99318654 | MS.gene68222:intron | 45.0% |
!! | TAGGAGTATTGTGCTCTGGT+AGG | + | chr3.4:99322882-99322901 | None:intergenic | 45.0% |
!! | AATTAAACTATATTAATAAA+AGG | - | chr3.4:99322260-99322279 | MS.gene68222:intron | 5.0% |
AACAGATGTTCTCAGGCCAG+TGG | + | chr3.4:99319469-99319488 | None:intergenic | 50.0% | |
ACACAGCAGCGACAACGAAA+TGG | - | chr3.4:99319888-99319907 | MS.gene68222:intron | 50.0% | |
ACATGTGCTTTCTCCCCAAC+TGG | - | chr3.4:99319240-99319259 | MS.gene68222:intron | 50.0% | |
ACGGACATTTCATGGGCATG+AGG | - | chr3.4:99319744-99319763 | MS.gene68222:intron | 50.0% | |
AGCCTCATACCACAGTGAAC+TGG | - | chr3.4:99320069-99320088 | MS.gene68222:intron | 50.0% | |
CCACAATACCCTACAAGGAG+TGG | + | chr3.4:99323351-99323370 | None:intergenic | 50.0% | |
CCTCATACCACAGTGAACTG+GGG | - | chr3.4:99320071-99320090 | MS.gene68222:intron | 50.0% | |
CGAAACTCGCCTCAAACGAT+TGG | - | chr3.4:99322663-99322682 | MS.gene68222:CDS | 50.0% | |
CGAGCAGTACGGACATTTCA+TGG | - | chr3.4:99319736-99319755 | MS.gene68222:intron | 50.0% | |
CGGACATTTCATGGGCATGA+GGG | - | chr3.4:99319745-99319764 | MS.gene68222:intron | 50.0% | |
GAAGGGAGGCTGAAAAAGAG+TGG | - | chr3.4:99320976-99320995 | MS.gene68222:intron | 50.0% | |
GATGGCATGCGAGCTTATAG+AGG | - | chr3.4:99321625-99321644 | MS.gene68222:intron | 50.0% | |
GCCTCATACCACAGTGAACT+GGG | - | chr3.4:99320070-99320089 | MS.gene68222:intron | 50.0% | |
GGAAAAAGACAGGAGAAGGG+AGG | - | chr3.4:99320962-99320981 | MS.gene68222:intron | 50.0% | |
TCGGTGGGACCAAAAGTAAC+GGG | + | chr3.4:99318647-99318666 | None:intergenic | 50.0% | |
TGCGATTTAGGGGTGAGTTC+TGG | - | chr3.4:99320614-99320633 | MS.gene68222:intron | 50.0% | |
! | TATGGGCATTTGGAGGGCAT+AGG | - | chr3.4:99323266-99323285 | MS.gene68222:intron | 50.0% |
! | TTCTAGCATGTGGCTTGCCT+CGG | - | chr3.4:99323029-99323048 | MS.gene68222:intron | 50.0% |
!! | CCACTCCTTGTAGGGTATTG+TGG | - | chr3.4:99323348-99323367 | MS.gene68222:CDS | 50.0% |
!! | TGGTAGGAGTGTTCTCACTC+TGG | + | chr3.4:99322866-99322885 | None:intergenic | 50.0% |
ACAAGGAGTGGCCCTGACAA+AGG | + | chr3.4:99323339-99323358 | None:intergenic | 55.0% | |
CACACGAGTGTCCCACAATC+TGG | + | chr3.4:99319710-99319729 | None:intergenic | 55.0% | |
CAGATTGTGGGACACTCGTG+TGG | - | chr3.4:99319708-99319727 | MS.gene68222:intron | 55.0% | |
CCCCAGTTCACTGTGGTATG+AGG | + | chr3.4:99320074-99320093 | None:intergenic | 55.0% | |
CGATGCGACTGCCAGATTGT+GGG | - | chr3.4:99319696-99319715 | MS.gene68222:intron | 55.0% | |
GAGGGCAGGATCACCTGTTT+GGG | - | chr3.4:99321301-99321320 | MS.gene68222:intron | 55.0% | |
GGATGAACGCCTGGATGCAT+TGG | + | chr3.4:99322720-99322739 | None:intergenic | 55.0% | |
GGTCAATCTGTTGCATGCGG+TGG | - | chr3.4:99319261-99319280 | MS.gene68222:intron | 55.0% | |
GTGTGGCAAGTCGAGCAGTA+CGG | - | chr3.4:99319725-99319744 | MS.gene68222:intron | 55.0% | |
TACATCCGAGGATGAACGCC+TGG | + | chr3.4:99322729-99322748 | None:intergenic | 55.0% | |
TCCACATACGTCAGCGTTCC+TGG | + | chr3.4:99323146-99323165 | None:intergenic | 55.0% | |
TCCAGGAACGCTGACGTATG+TGG | - | chr3.4:99323142-99323161 | MS.gene68222:intron | 55.0% | |
TGAGGGCAGGATCACCTGTT+TGG | - | chr3.4:99321300-99321319 | MS.gene68222:intron | 55.0% | |
TGCATCCAGGCGTTCATCCT+CGG | - | chr3.4:99322721-99322740 | MS.gene68222:CDS | 55.0% | |
TGTCAGGGCCACTCCTTGTA+GGG | - | chr3.4:99323340-99323359 | MS.gene68222:intron | 55.0% | |
TTGTCAGGGCCACTCCTTGT+AGG | - | chr3.4:99323339-99323358 | MS.gene68222:intron | 55.0% | |
! | GGCATTTGGAGGGCATAGGA+AGG | - | chr3.4:99323270-99323289 | MS.gene68222:intron | 55.0% |
GCGATGCGACTGCCAGATTG+TGG | - | chr3.4:99319695-99319714 | MS.gene68222:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 99318430 | 99323446 | 99318430 | ID=MS.gene68222 |
chr3.4 | mRNA | 99318430 | 99323446 | 99318430 | ID=MS.gene68222.t1;Parent=MS.gene68222 |
chr3.4 | exon | 99323341 | 99323446 | 99323341 | ID=MS.gene68222.t1.exon1;Parent=MS.gene68222.t1 |
chr3.4 | CDS | 99323341 | 99323446 | 99323341 | ID=cds.MS.gene68222.t1;Parent=MS.gene68222.t1 |
chr3.4 | exon | 99323170 | 99323264 | 99323170 | ID=MS.gene68222.t1.exon2;Parent=MS.gene68222.t1 |
chr3.4 | CDS | 99323170 | 99323264 | 99323170 | ID=cds.MS.gene68222.t1;Parent=MS.gene68222.t1 |
chr3.4 | exon | 99322344 | 99322768 | 99322344 | ID=MS.gene68222.t1.exon3;Parent=MS.gene68222.t1 |
chr3.4 | CDS | 99322344 | 99322768 | 99322344 | ID=cds.MS.gene68222.t1;Parent=MS.gene68222.t1 |
chr3.4 | exon | 99321868 | 99322228 | 99321868 | ID=MS.gene68222.t1.exon4;Parent=MS.gene68222.t1 |
chr3.4 | CDS | 99321868 | 99322228 | 99321868 | ID=cds.MS.gene68222.t1;Parent=MS.gene68222.t1 |
chr3.4 | exon | 99320498 | 99320611 | 99320498 | ID=MS.gene68222.t1.exon5;Parent=MS.gene68222.t1 |
chr3.4 | CDS | 99320498 | 99320611 | 99320498 | ID=cds.MS.gene68222.t1;Parent=MS.gene68222.t1 |
chr3.4 | exon | 99319065 | 99319146 | 99319065 | ID=MS.gene68222.t1.exon6;Parent=MS.gene68222.t1 |
chr3.4 | CDS | 99319065 | 99319146 | 99319065 | ID=cds.MS.gene68222.t1;Parent=MS.gene68222.t1 |
chr3.4 | exon | 99318430 | 99318515 | 99318430 | ID=MS.gene68222.t1.exon7;Parent=MS.gene68222.t1 |
chr3.4 | CDS | 99318430 | 99318515 | 99318430 | ID=cds.MS.gene68222.t1;Parent=MS.gene68222.t1 |
Gene Sequence |
Protein sequence |