AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014281


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014281.t1 MTR_3g116500 98.656 372 5 0 1 372 1 372 0.0 755
MS.gene014281.t1 MTR_3g116500 98.092 262 5 0 111 372 1 262 0.0 527
MS.gene014281.t1 MTR_1g054300 24.207 347 207 10 60 370 156 482 1.96e-16 81.6
MS.gene014281.t1 MTR_5g022690 28.139 231 143 9 150 377 273 483 5.04e-16 80.1
MS.gene014281.t1 MTR_5g022690 24.201 219 152 4 57 275 271 475 3.93e-11 65.1
MS.gene014281.t1 MTR_2g012630 31.373 204 123 7 172 375 31 217 5.16e-16 80.9
MS.gene014281.t1 MTR_2g012630 31.373 204 123 7 172 375 31 217 6.05e-16 80.9
MS.gene014281.t1 MTR_2g436510 25.676 222 146 7 150 371 164 366 1.09e-15 79.3
MS.gene014281.t1 MTR_3g106080 26.894 264 168 7 61 314 415 663 1.53e-15 79.3
MS.gene014281.t1 MTR_3g106080 27.523 218 138 7 151 367 414 612 5.37e-14 74.3
MS.gene014281.t1 MTR_3g106080 28.571 217 130 8 110 324 422 615 1.19e-12 70.1
MS.gene014281.t1 MTR_4g095058 25.000 364 212 16 35 371 206 535 2.32e-15 78.6
MS.gene014281.t1 MTR_4g095058 25.207 242 146 10 60 287 325 545 1.55e-13 72.8
MS.gene014281.t1 MTR_4g119620 28.571 224 144 7 148 367 19 230 2.40e-15 77.0
MS.gene014281.t1 MTR_4g095058 25.000 364 212 16 35 371 204 533 2.46e-15 78.6
MS.gene014281.t1 MTR_4g095058 25.207 242 146 10 60 287 323 543 1.50e-13 72.8
MS.gene014281.t1 MTR_1g072140 24.060 266 185 5 59 324 21 269 4.02e-15 76.3
MS.gene014281.t1 MTR_1g072140 28.251 223 143 7 57 275 103 312 1.73e-14 74.3
MS.gene014281.t1 MTR_1g072140 30.114 176 109 6 150 325 21 182 3.43e-12 67.4
MS.gene014281.t1 MTR_5g016350 22.881 354 213 14 47 371 154 476 9.49e-15 76.3
MS.gene014281.t1 MTR_5g016350 23.967 242 149 9 60 287 266 486 9.18e-12 67.0
MS.gene014281.t1 MTR_5g016350 22.881 354 213 14 47 371 218 540 1.79e-14 75.9
MS.gene014281.t1 MTR_5g016350 23.967 242 149 9 60 287 330 550 1.21e-11 67.0
MS.gene014281.t1 MTR_5g016370 23.077 351 214 13 47 371 232 552 2.18e-14 75.5
MS.gene014281.t1 MTR_5g016370 22.822 241 151 9 60 286 342 561 1.65e-13 72.8
MS.gene014281.t1 MTR_7g086360 26.496 234 153 7 151 383 50 265 3.75e-14 73.6
MS.gene014281.t1 MTR_7g086360 21.786 280 195 8 61 334 51 312 1.60e-12 68.6
MS.gene014281.t1 MTR_2g102277 23.529 255 178 4 68 322 60 297 5.92e-14 74.3
MS.gene014281.t1 MTR_2g102277 23.529 255 178 4 68 322 60 297 6.25e-14 74.3
MS.gene014281.t1 MTR_4g011950 23.137 255 179 4 68 322 60 297 2.41e-13 72.4
MS.gene014281.t1 MTR_6g004040 27.027 259 159 10 122 378 32 262 3.60e-13 72.0
MS.gene014281.t1 MTR_8g106790 24.251 334 212 11 60 372 10 323 6.20e-13 69.7
MS.gene014281.t1 MTR_8g038550 24.497 298 196 11 73 367 191 462 1.39e-12 70.1
MS.gene014281.t1 MTR_4g102520 23.197 319 221 10 58 371 287 586 2.40e-12 69.3
MS.gene014281.t1 MTR_2g054920 25.094 267 176 7 60 325 56 299 4.39e-12 67.4
MS.gene014281.t1 MTR_1g097140 25.000 312 202 10 61 369 119 401 6.00e-12 67.4
MS.gene014281.t1 MTR_1g097140 27.451 255 161 9 110 363 83 314 8.52e-12 67.0
MS.gene014281.t1 MTR_2g102267 22.957 257 179 5 59 314 53 291 6.51e-12 66.6
MS.gene014281.t1 MTR_3g045130 24.419 258 169 8 113 369 278 510 7.65e-12 67.4
MS.gene014281.t1 MTR_3g075400 23.779 307 207 9 57 360 217 499 4.46e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014281.t1 AT4G34460 79.088 373 75 2 1 372 1 371 0.0 586
MS.gene014281.t1 AT4G34460 78.820 373 71 3 1 372 1 366 0.0 575
MS.gene014281.t1 AT4G34460 79.104 335 67 2 1 334 1 333 0.0 525
MS.gene014281.t1 AT4G34460 79.805 307 59 2 67 372 5 309 0.0 506
MS.gene014281.t1 AT4G02730 25.338 296 199 10 38 332 19 293 3.71e-19 88.6
MS.gene014281.t1 AT4G02730 26.147 218 145 6 150 367 37 238 5.17e-14 73.2
MS.gene014281.t1 AT5G67320 26.146 371 206 15 33 366 226 565 2.08e-18 87.8
MS.gene014281.t1 AT5G67320 23.404 235 157 8 60 286 360 579 1.44e-13 73.2
MS.gene014281.t1 AT5G67320 25.957 235 141 8 150 369 259 475 3.95e-11 65.5
MS.gene014281.t1 AT5G52820 23.238 383 212 9 57 369 101 471 7.27e-18 85.9
MS.gene014281.t1 AT3G16650 27.477 222 141 9 150 371 164 365 1.78e-17 84.7
MS.gene014281.t1 AT5G25150 27.419 248 165 6 49 296 402 634 2.85e-17 84.7
MS.gene014281.t1 AT5G25150 30.612 245 142 9 151 394 413 630 1.09e-16 82.8
MS.gene014281.t1 AT5G25150 27.419 248 165 6 49 296 402 634 3.10e-17 84.3
MS.gene014281.t1 AT5G25150 29.796 245 144 8 151 394 413 630 1.02e-16 82.8
MS.gene014281.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.14e-16 81.6
MS.gene014281.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene014281.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene014281.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene014281.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene014281.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.36e-16 81.6
MS.gene014281.t1 AT2G41500 26.459 257 160 9 113 367 304 533 3.42e-16 80.9
MS.gene014281.t1 AT2G41500 26.459 257 160 9 113 367 304 533 3.42e-16 80.9
MS.gene014281.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.70e-16 81.3
MS.gene014281.t1 AT1G52360 22.909 275 189 7 52 323 2 256 2.18e-15 79.0
MS.gene014281.t1 AT1G52360 23.529 255 178 4 68 322 60 297 1.39e-14 76.6
MS.gene014281.t1 AT1G52360 22.909 275 189 7 52 323 46 300 2.28e-15 79.0
MS.gene014281.t1 AT1G52360 23.529 255 178 4 68 322 104 341 1.32e-14 76.6
MS.gene014281.t1 AT1G52360 22.909 275 189 7 52 323 2 256 2.32e-15 79.0
MS.gene014281.t1 AT1G52360 23.529 255 178 4 68 322 60 297 1.43e-14 76.6
MS.gene014281.t1 AT1G52360 22.909 275 189 7 52 323 2 256 2.32e-15 79.0
MS.gene014281.t1 AT1G52360 23.529 255 178 4 68 322 60 297 1.43e-14 76.6
MS.gene014281.t1 AT5G13480 26.174 298 191 10 73 367 142 413 2.50e-15 78.6
MS.gene014281.t1 AT5G13480 26.174 298 191 10 73 367 119 390 2.99e-15 78.2
MS.gene014281.t1 AT5G13480 26.174 298 191 10 73 367 119 390 3.19e-15 78.2
MS.gene014281.t1 AT5G13480 26.174 298 191 10 73 367 131 402 4.08e-15 77.8
MS.gene014281.t1 AT1G11160 31.122 196 118 7 172 367 31 209 5.32e-15 77.8
MS.gene014281.t1 AT4G15900 26.577 222 144 8 150 371 170 372 5.47e-15 77.0
MS.gene014281.t1 AT1G11160 31.122 196 118 7 172 367 31 209 5.72e-15 77.8
MS.gene014281.t1 AT1G11160 31.122 196 118 7 172 367 31 209 6.24e-15 77.8
MS.gene014281.t1 AT5G08390 28.922 204 128 7 172 375 32 218 9.24e-15 77.0
MS.gene014281.t1 AT1G61210 30.612 196 119 7 172 367 31 209 1.55e-14 76.3
MS.gene014281.t1 AT1G61210 30.612 196 119 7 172 367 31 209 1.93e-14 76.3
MS.gene014281.t1 AT1G61210 30.612 196 119 7 172 367 31 209 1.95e-14 76.3
MS.gene014281.t1 AT1G79990 23.137 255 179 4 68 322 60 297 3.73e-14 75.1
MS.gene014281.t1 AT1G71840 25.159 314 205 11 61 369 109 397 3.79e-14 74.3
MS.gene014281.t1 AT1G79990 23.137 255 179 4 68 322 60 297 3.88e-14 75.1
MS.gene014281.t1 AT5G23430 28.922 204 128 7 172 375 32 218 4.49e-14 74.7
MS.gene014281.t1 AT5G23430 24.843 318 192 15 63 366 14 298 4.69e-11 65.5
MS.gene014281.t1 AT5G23430 28.922 204 128 7 172 375 32 218 4.49e-14 74.7
MS.gene014281.t1 AT5G23430 24.843 318 192 15 63 366 14 298 4.69e-11 65.5
MS.gene014281.t1 AT5G23430 28.922 204 128 7 172 375 32 218 4.65e-14 74.7
MS.gene014281.t1 AT5G23430 24.843 318 192 15 63 366 14 298 4.69e-11 65.5
MS.gene014281.t1 AT1G11160 30.723 166 103 5 202 367 14 167 1.02e-13 73.9
MS.gene014281.t1 AT1G15470 26.000 250 143 7 60 275 51 292 1.37e-13 72.0
MS.gene014281.t1 AT2G33340 26.246 301 143 14 122 371 237 509 3.00e-13 72.0
MS.gene014281.t1 AT2G33340 26.246 301 143 14 122 371 237 509 3.00e-13 72.0
MS.gene014281.t1 AT3G15610 26.855 283 160 8 60 308 56 325 4.18e-13 70.5
MS.gene014281.t1 AT3G49660 24.068 295 198 10 47 334 6 281 7.25e-13 69.7
MS.gene014281.t1 AT3G49660 23.502 217 155 4 59 275 107 312 3.53e-11 64.3
MS.gene014281.t1 AT4G29830 31.183 186 104 8 97 276 152 319 2.15e-12 68.2
MS.gene014281.t1 AT3G18130 23.567 314 199 11 80 372 31 324 1.37e-11 65.9
MS.gene014281.t1 AT2G43770 23.162 272 178 8 110 370 56 307 1.42e-11 65.9
MS.gene014281.t1 AT2G43770 21.071 280 197 9 61 334 49 310 3.77e-11 64.7
MS.gene014281.t1 AT1G10580 23.975 317 213 11 60 369 277 572 1.72e-11 66.6
MS.gene014281.t1 AT1G52730 26.400 250 142 6 60 275 56 297 2.93e-11 65.1
MS.gene014281.t1 AT1G52730 26.400 250 142 6 60 275 56 297 2.93e-11 65.1

Find 98 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGTTTGGGATACTTTAT+TGG 0.165728 3.1:-92088507 MS.gene014281:CDS
ACTCTCAGCATTTCCATTAA+TGG 0.169125 3.1:-92088848 MS.gene014281:intron
AGAACCAGATACAAACATTT+TGG 0.219891 3.1:+92088817 None:intergenic
TTTGGAGTTGGATCCATTAA+TGG 0.230052 3.1:+92088835 None:intergenic
TTTCCTGATGGAAATAGATT+TGG 0.276868 3.1:-92088698 MS.gene014281:CDS
AACTCCAAAATGTTTGTATC+TGG 0.288983 3.1:-92088821 MS.gene014281:CDS
AAGAATAGAATAAACCTTTC+CGG 0.299760 3.1:+92089803 None:intergenic
TGAGGGCAGGATCACCTGTT+TGG 0.300230 3.1:-92087200 MS.gene014281:CDS
GAAGACACTCACTTAATTAC+TGG 0.314223 3.1:-92089081 MS.gene014281:CDS
CTTGCAGATTGTTTGACATT+AGG 0.319869 3.1:-92088655 MS.gene014281:CDS
GGTAGAACTCCCGTTACTTT+TGG 0.320614 3.1:-92089867 MS.gene014281:CDS
AAGTTGGGACACAAATTTAA+AGG 0.324926 3.1:-92087143 MS.gene014281:intron
TCCGGAAGACTTCTTATTGC+TGG 0.330505 3.1:-92088548 MS.gene014281:CDS
CAAATGGCGATTGCTATGTT+TGG 0.331633 3.1:-92088520 MS.gene014281:CDS
AAGATGGAAGATTAATAGTA+TGG 0.336164 3.1:-92089329 MS.gene014281:CDS
TCATCTTGTCAGTATGTTCC+AGG 0.349435 3.1:-92089105 MS.gene014281:CDS
GAGGGCAGGATCACCTGTTT+GGG 0.353821 3.1:-92087199 MS.gene014281:CDS
ATCTTAATTCACCCACTGAT+AGG 0.354475 3.1:-92089179 MS.gene014281:CDS
AATAAGAAGTCTTCCGGATA+TGG 0.370745 3.1:+92088553 None:intergenic
TTTGAAGAGATCCTAGATTC+AGG 0.375592 3.1:+92087230 None:intergenic
CGAGCAGTACGGACATTTCA+TGG 0.392393 3.1:-92088752 MS.gene014281:CDS
AAATGGCGATTGCTATGTTT+GGG 0.404058 3.1:-92088519 MS.gene014281:CDS
TCCAGCAATAAGAAGTCTTC+CGG 0.412039 3.1:+92088547 None:intergenic
CACACGAGTGTCCCACAATC+TGG 0.420398 3.1:+92088781 None:intergenic
CTTATTGCTGGATATACAAA+TGG 0.425275 3.1:-92088536 MS.gene014281:CDS
TGCTTTGTGTACAGGAAGTT+GGG 0.428629 3.1:-92087158 MS.gene014281:CDS
TCCATTGCATTCTCCATATC+CGG 0.434553 3.1:-92088566 MS.gene014281:CDS
AATGTTTCAAGGATGCTTAG+TGG 0.436820 3.1:-92089144 MS.gene014281:CDS
AGGATGCTTAGTGGACATAA+AGG 0.438435 3.1:-92089135 MS.gene014281:CDS
GTGCTTTGTGTACAGGAAGT+TGG 0.441799 3.1:-92087159 MS.gene014281:CDS
TTGTAGGTGGTCCTGAATCT+AGG 0.445164 3.1:-92087241 MS.gene014281:intron
ATCAGCAGACAAACCCAAAC+AGG 0.447682 3.1:+92087186 None:intergenic
CTGTATTTACTGAATGATAA+TGG 0.447942 3.1:-92086430 MS.gene014281:intron
ACGTTCTCTGAGATTGTTGA+CGG 0.459466 3.1:+92090031 None:intergenic
ACATGTGCTTTCTCCCCAAC+TGG 0.465526 3.1:-92089249 MS.gene014281:CDS
TACAGGTTTACTCATTGGAT+TGG 0.465737 3.1:-92089386 MS.gene014281:intron
GATGCTTCTGATGTTGACTT+TGG 0.469044 3.1:-92085832 MS.gene014281:CDS
TCTGTCAAATTCTTTCCTGA+TGG 0.470264 3.1:-92088710 MS.gene014281:CDS
GTTCCAAATCTATTTCCATC+AGG 0.472273 3.1:+92088695 None:intergenic
TTGGGATACTTTATTGGCTA+AGG 0.475505 3.1:-92088501 MS.gene014281:intron
CCACTCCTTGTAGGGTATTG+TGG 0.476279 3.1:-92085874 MS.gene014281:intron
TGTTTGGGTTTGTCTGCTGA+TGG 0.484615 3.1:-92087184 MS.gene014281:CDS
TGCATCCAGGCGTTCATCCT+CGG 0.490721 3.1:-92086499 MS.gene014281:intron
AGTTCTACAGCAAAGGATAT+CGG 0.491736 3.1:+92089839 None:intergenic
ACTCACTTAATTACTGGTTC+TGG 0.492296 3.1:-92089075 MS.gene014281:CDS
ATGCAACAGATTGACCAGTT+GGG 0.494182 3.1:+92089235 None:intergenic
TTTGGAGGTGAATTTCAGTC+TGG 0.494970 3.1:-92089000 MS.gene014281:CDS
TTTGGAACTGGCTCAGAAGA+TGG 0.495617 3.1:-92088680 MS.gene014281:CDS
GATGGAAATAGATTTGGAAC+TGG 0.496817 3.1:-92088692 MS.gene014281:CDS
ACACAGCAGTGACAACGAAA+TGG 0.496865 3.1:-92088600 MS.gene014281:CDS
CTATAAAGCTTCCTTGTGCA+TGG 0.503577 3.1:-92089278 MS.gene014281:CDS
AACATCAGAAGCATCACTAC+TGG 0.504542 3.1:+92085840 None:intergenic
GATGGAAGTGCTTTGTGTAC+AGG 0.510526 3.1:-92087166 MS.gene014281:CDS
GCTGATTATATACTTGAAGT+TGG 0.510768 3.1:+92088624 None:intergenic
ATGGGAATCTAAATGTTTCA+AGG 0.511123 3.1:-92089155 MS.gene014281:CDS
AAACCTTTCCGGTATGACCT+TGG 0.513421 3.1:+92089814 None:intergenic
GCGATGCGACTGCCAGATTG+TGG 0.518560 3.1:-92088793 MS.gene014281:CDS
TTCAAAACTCTCATGAGGGC+AGG 0.518906 3.1:-92087213 MS.gene014281:CDS
TCGGTGGGACCAAAAGTAAC+GGG 0.529222 3.1:+92089858 None:intergenic
TCTTAATTCACCCACTGATA+GGG 0.531433 3.1:-92089178 MS.gene014281:CDS
TCATCCTCGGATGTATTCAA+TGG 0.538527 3.1:-92086486 MS.gene014281:CDS
CATGCAACAGATTGACCAGT+TGG 0.543738 3.1:+92089234 None:intergenic
AGAACTCTCCAAGGTCATAC+CGG 0.550488 3.1:-92089822 MS.gene014281:CDS
GACATACTGCAGATGTACTT+AGG 0.555324 3.1:-92088978 MS.gene014281:intron
ATTCACCCACTGATAGGGAT+GGG 0.578801 3.1:-92089173 MS.gene014281:CDS
CGATGCGACTGCCAGATTGT+GGG 0.579543 3.1:-92088792 MS.gene014281:CDS
TGCAACAGATTGACCAGTTG+GGG 0.579784 3.1:+92089236 None:intergenic
AGATTGTTTGACATTAGGAC+TGG 0.580110 3.1:-92088650 MS.gene014281:CDS
GGTCAATCTGTTGCATGCGG+TGG 0.581213 3.1:-92089228 MS.gene014281:CDS
AATTCACCCACTGATAGGGA+TGG 0.581894 3.1:-92089174 MS.gene014281:CDS
ATTGTTAGTGCATCTCAAGA+TGG 0.582738 3.1:-92089345 MS.gene014281:CDS
GCTGGTTATGCAAAGTCTCA+AGG 0.587086 3.1:-92089888 MS.gene014281:CDS
TATAAAGCTTCCTTGTGCAT+GGG 0.587824 3.1:-92089277 MS.gene014281:CDS
ATCGGTGGGACCAAAAGTAA+CGG 0.588862 3.1:+92089857 None:intergenic
CGGACATTTCATGGGCATGA+GGG 0.590801 3.1:-92088743 MS.gene014281:CDS
TAGATTCCCATCCCTATCAG+TGG 0.592534 3.1:+92089167 None:intergenic
CTTTGCTGTAGAACTCTCCA+AGG 0.594435 3.1:-92089831 MS.gene014281:CDS
GAGCAGTACGGACATTTCAT+GGG 0.596617 3.1:-92088751 MS.gene014281:CDS
AGATTCCCATCCCTATCAGT+GGG 0.597288 3.1:+92089168 None:intergenic
CTTGGAGAGTTCTACAGCAA+AGG 0.598090 3.1:+92089832 None:intergenic
ATCTCTTCAAAACTCTCATG+AGG 0.599478 3.1:-92087218 MS.gene014281:CDS
ACGGACATTTCATGGGCATG+AGG 0.601876 3.1:-92088744 MS.gene014281:CDS
ATTAAGTGAGTGTCTTCACC+TGG 0.602650 3.1:+92089087 None:intergenic
AGAACGTCACATAGCTGCAA+CGG 0.607199 3.1:-92090057 MS.gene014281:CDS
TCCGGATATGGAGAATGCAA+TGG 0.614685 3.1:+92088565 None:intergenic
GTGTGGCAAGTCGAGCAGTA+CGG 0.621594 3.1:-92088763 MS.gene014281:CDS
CATGTCATAACCCATGCACA+AGG 0.635502 3.1:+92089267 None:intergenic
AAATAGAACAAACACTGTCA+AGG 0.643390 3.1:+92089205 None:intergenic
TCTACAGCAAAGGATATCGG+TGG 0.646947 3.1:+92089842 None:intergenic
TCTCTTCAAAACTCTCATGA+GGG 0.650264 3.1:-92087217 MS.gene014281:CDS
AACAGATGTTCTCAGGCCAG+TGG 0.652607 3.1:+92089023 None:intergenic
TCTCCAAGGTCATACCGGAA+AGG 0.660052 3.1:-92089817 MS.gene014281:intron
CTACAGCAAAGGATATCGGT+GGG 0.670691 3.1:+92089843 None:intergenic
CATGCCATTGAATACATCCG+AGG 0.674309 3.1:+92086482 None:intergenic
CAGATTGTGGGACACTCGTG+TGG 0.674572 3.1:-92088780 MS.gene014281:CDS
GGATATGGAGAATGCAATGG+AGG 0.676943 3.1:+92088568 None:intergenic
ACTGGTCAATCTGTTGCATG+CGG 0.714193 3.1:-92089231 MS.gene014281:CDS
TATCTGTATCAAGAAGAGAG+AGG 0.734700 3.1:+92089994 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTAAGCTAAAAT+CGG - chr3.1:92086317-92086336 MS.gene014281:intron 10.0%
!!! AAATTTTTTTCTTATTTTGA+AGG - chr3.1:92088283-92088302 MS.gene014281:intron 10.0%
!!! ATTTCTACTTATTATATTTT+GGG - chr3.1:92087556-92087575 MS.gene014281:intron 10.0%
!!! TATTTCTACTTATTATATTT+TGG - chr3.1:92087555-92087574 MS.gene014281:intron 10.0%
!!! TTTTCTTTTTTCAAAAAATA+TGG + chr3.1:92088438-92088457 None:intergenic 10.0%
!! AGTTAATATGAATTATTTGA+AGG - chr3.1:92088260-92088279 MS.gene014281:intron 15.0%
!! TATTCTAATTTCTTCTTAAT+CGG - chr3.1:92086149-92086168 MS.gene014281:intron 15.0%
!!! AAAAAGCATTATATTTATGA+TGG - chr3.1:92088982-92089001 MS.gene014281:CDS 15.0%
!!! AAAGAATCTTATTTTCTATA+TGG + chr3.1:92087767-92087786 None:intergenic 15.0%
!!! AAGAATCTTATTTTCTATAT+GGG + chr3.1:92087766-92087785 None:intergenic 15.0%
!!! ATATTTTTGTTATAAAAGAG+AGG + chr3.1:92089611-92089630 None:intergenic 15.0%
!!! TAATTCCTAATTCTTTTTAA+AGG + chr3.1:92088952-92088971 None:intergenic 15.0%
!!! TATTTTTGTTATAAAAGAGA+GGG + chr3.1:92089610-92089629 None:intergenic 15.0%
!!! TTAAACCTTTAAAAAGAATT+AGG - chr3.1:92088944-92088963 MS.gene014281:intron 15.0%
!!! TTGATAATATTACTATACTA+TGG - chr3.1:92089743-92089762 MS.gene014281:intron 15.0%
!! ATCTTTGTTGCTATAATATA+AGG - chr3.1:92086347-92086366 MS.gene014281:intron 20.0%
!! GATTATGTAAAACAAAAGTA+GGG - chr3.1:92087415-92087434 MS.gene014281:intron 20.0%
!! GCATTATCTTGTATATAAAT+TGG - chr3.1:92088100-92088119 MS.gene014281:intron 20.0%
!! GTACAAAATAAAATAAACAG+CGG + chr3.1:92088186-92088205 None:intergenic 20.0%
!! TATTTGATACAAATATGCAT+TGG + chr3.1:92089772-92089791 None:intergenic 20.0%
!! TCTATCTTGAAAAAATGTTT+AGG - chr3.1:92089864-92089883 MS.gene014281:CDS 20.0%
!! TCTTTGTTGCTATAATATAA+GGG - chr3.1:92086348-92086367 MS.gene014281:intron 20.0%
!! TGATTATGTAAAACAAAAGT+AGG - chr3.1:92087414-92087433 MS.gene014281:intron 20.0%
!!! AAACATTTTTTCAAGATAGA+CGG + chr3.1:92089864-92089883 None:intergenic 20.0%
!!! ACAGAATCTTATTTTCTATA+TGG + chr3.1:92087919-92087938 None:intergenic 20.0%
!!! CAGAATCTTATTTTCTATAT+GGG + chr3.1:92087918-92087937 None:intergenic 20.0%
!!! GATTTCACTGATTAAATATA+TGG - chr3.1:92089819-92089838 MS.gene014281:CDS 20.0%
!!! TTTTTAAAGGTTTAACCTTA+AGG + chr3.1:92088939-92088958 None:intergenic 20.0%
! AAAAATATGATACCAACTTC+AGG + chr3.1:92089168-92089187 None:intergenic 25.0%
! AAAATATGATACCAACTTCA+GGG + chr3.1:92089167-92089186 None:intergenic 25.0%
! AAGAATAGAATAAACCTTTC+CGG + chr3.1:92086075-92086094 None:intergenic 25.0%
! AAGATGGAAGATTAATAGTA+TGG - chr3.1:92086546-92086565 MS.gene014281:intron 25.0%
! ACTGATTAAATATATGGATG+TGG - chr3.1:92089825-92089844 MS.gene014281:CDS 25.0%
! AGATCTATATGAAAATCAGT+TGG - chr3.1:92086948-92086967 MS.gene014281:intron 25.0%
! ATACTCCTAGTCTATATTAA+TGG + chr3.1:92088389-92088408 None:intergenic 25.0%
! CAAAAAATTTACCACTAACT+TGG + chr3.1:92089124-92089143 None:intergenic 25.0%
! CGTAAAATTGAAGTTAGTTA+CGG + chr3.1:92086208-92086227 None:intergenic 25.0%
! CTAATGCTTCATTTCATTAA+GGG - chr3.1:92086243-92086262 MS.gene014281:intron 25.0%
! CTGTATTTACTGAATGATAA+TGG - chr3.1:92089445-92089464 MS.gene014281:intron 25.0%
! GATCTATATGAAAATCAGTT+GGG - chr3.1:92086949-92086968 MS.gene014281:intron 25.0%
! GTCTGATACATAAAACTTAT+AGG - chr3.1:92088770-92088789 MS.gene014281:CDS 25.0%
! GTGGAATAACATAAAACAAA+AGG - chr3.1:92089490-92089509 MS.gene014281:intron 25.0%
! TACTCCTAGTCTATATTAAT+GGG + chr3.1:92088388-92088407 None:intergenic 25.0%
! TAGTTTATAAGCTTTCCTTA+AGG - chr3.1:92088921-92088940 MS.gene014281:intron 25.0%
! TATAGGTTATGTGTGATATA+GGG - chr3.1:92088787-92088806 MS.gene014281:CDS 25.0%
! TTAAAGTAGTAACTTTGACT+TGG + chr3.1:92087729-92087748 None:intergenic 25.0%
! TTATAGGTTATGTGTGATAT+AGG - chr3.1:92088786-92088805 MS.gene014281:CDS 25.0%
!! AATTTTACAGGTTTACTCAT+TGG - chr3.1:92086484-92086503 MS.gene014281:CDS 25.0%
!! CGCATTCATTTAAATTTTAC+AGG - chr3.1:92086472-92086491 MS.gene014281:CDS 25.0%
!! CGTAACTAACTTCAATTTTA+CGG - chr3.1:92086206-92086225 MS.gene014281:intron 25.0%
!! TGATCAAACATGTGTTTTAT+GGG - chr3.1:92086823-92086842 MS.gene014281:intron 25.0%
!! TTCATATTAACTCCTTTTAC+TGG + chr3.1:92088252-92088271 None:intergenic 25.0%
!!! ATTTTATTTCGAAAGGTAGT+TGG - chr3.1:92087581-92087600 MS.gene014281:intron 25.0%
!!! CAAGTTAGTGGTAAATTTTT+TGG - chr3.1:92089122-92089141 MS.gene014281:CDS 25.0%
!!! GATTGAACTTTTAAAGAACT+AGG - chr3.1:92088889-92088908 MS.gene014281:intron 25.0%
!!! GGCATAGTTTTTTTTTAGTA+TGG - chr3.1:92086970-92086989 MS.gene014281:intron 25.0%
!!! GGTTGAGATTTTTCTTATTT+TGG - chr3.1:92088316-92088335 MS.gene014281:intron 25.0%
!!! TATTTTGAAGGTTTATCTTC+TGG - chr3.1:92088295-92088314 MS.gene014281:intron 25.0%
!!! TTCTTATTTTGGAAAAAGAC+AGG - chr3.1:92088327-92088346 MS.gene014281:intron 25.0%
AAATAGAACAAACACTGTCA+AGG + chr3.1:92086673-92086692 None:intergenic 30.0%
AACTCCAAAATGTTTGTATC+TGG - chr3.1:92087054-92087073 MS.gene014281:intron 30.0%
AACTCCCATTAATATAGACT+AGG - chr3.1:92088381-92088400 MS.gene014281:intron 30.0%
AAGTTGGGACACAAATTTAA+AGG - chr3.1:92088732-92088751 MS.gene014281:CDS 30.0%
AATCTTCTGGTCATAATACT+GGG - chr3.1:92089091-92089110 MS.gene014281:CDS 30.0%
ACAGAACACAAATTAATGGT+TGG + chr3.1:92086177-92086196 None:intergenic 30.0%
AGTATATTAAATCTCAGGCT+TGG - chr3.1:92088404-92088423 MS.gene014281:intron 30.0%
ATAGAAACTAAACATGCTGT+TGG + chr3.1:92087950-92087969 None:intergenic 30.0%
ATAGGTTATGTGTGATATAG+GGG - chr3.1:92088788-92088807 MS.gene014281:CDS 30.0%
ATATAAGGGAATTGCTGTAT+TGG - chr3.1:92086362-92086381 MS.gene014281:intron 30.0%
ATGGGAATCTAAATGTTTCA+AGG - chr3.1:92086720-92086739 MS.gene014281:intron 30.0%
ATTGAGTCAATGTTGTTAGT+TGG + chr3.1:92089577-92089596 None:intergenic 30.0%
CAAGAGCAAGTACAAATAAA+TGG + chr3.1:92088539-92088558 None:intergenic 30.0%
CTCATCATGATTAATAGACT+CGG + chr3.1:92088072-92088091 None:intergenic 30.0%
CTGAACAGAACACAAATTAA+TGG + chr3.1:92086181-92086200 None:intergenic 30.0%
CTTATTGCTGGATATACAAA+TGG - chr3.1:92087339-92087358 MS.gene014281:intron 30.0%
GCTAATGCTTCATTTCATTA+AGG - chr3.1:92086242-92086261 MS.gene014281:intron 30.0%
GCTGATTATATACTTGAAGT+TGG + chr3.1:92087254-92087273 None:intergenic 30.0%
TAGTCTATATTAATGGGAGT+TGG + chr3.1:92088382-92088401 None:intergenic 30.0%
TATAAAAGCTCCACATCAAA+AGG + chr3.1:92088163-92088182 None:intergenic 30.0%
TATAAGGGAATTGCTGTATT+GGG - chr3.1:92086363-92086382 MS.gene014281:intron 30.0%
TTACTTCTACATGCGATTTA+GGG - chr3.1:92087990-92088009 MS.gene014281:intron 30.0%
TTGAAGCTAACTTCCAAAAT+TGG + chr3.1:92088821-92088840 None:intergenic 30.0%
TTGCTTCTTCATTTGATTGT+AGG - chr3.1:92088618-92088637 MS.gene014281:CDS 30.0%
TTTACTTCTACATGCGATTT+AGG - chr3.1:92087989-92088008 MS.gene014281:intron 30.0%
TTTCCTGATGGAAATAGATT+TGG - chr3.1:92087177-92087196 MS.gene014281:CDS 30.0%
! ACACTTTTGGCAAAGATAAT+TGG - chr3.1:92087496-92087515 MS.gene014281:intron 30.0%
! AGAACCAGATACAAACATTT+TGG + chr3.1:92087061-92087080 None:intergenic 30.0%
! CTAGGAGTATATTAAATCTC+AGG - chr3.1:92088399-92088418 MS.gene014281:intron 30.0%
! CTATGTTTGGGATACTTTAT+TGG - chr3.1:92087368-92087387 MS.gene014281:intron 30.0%
! GTGATCAAACATGTGTTTTA+TGG - chr3.1:92086822-92086841 MS.gene014281:intron 30.0%
! TACTATGTTTGCAACACTTT+TGG - chr3.1:92087483-92087502 MS.gene014281:intron 30.0%
! TAGAAATGTCGAAAGCATAA+TGG + chr3.1:92088029-92088048 None:intergenic 30.0%
! TATCACAATACCTTTTGATG+TGG - chr3.1:92088150-92088169 MS.gene014281:intron 30.0%
! TTTGTTATAAAAGAGAGGGA+AGG + chr3.1:92089606-92089625 None:intergenic 30.0%
!! AATGATAATGGTGAGCTAAA+AGG - chr3.1:92089457-92089476 MS.gene014281:intron 30.0%
!! ATCCTAAAGGAAGTATGTTT+TGG + chr3.1:92089049-92089068 None:intergenic 30.0%
!! TACTTCCTTTAGGATTGTTA+AGG - chr3.1:92089054-92089073 MS.gene014281:CDS 30.0%
!! TGTTGACTTTGGTCAAAAAT+TGG - chr3.1:92090054-92090073 MS.gene014281:CDS 30.0%
!! TTGGGAGATTTTATTTCGAA+AGG - chr3.1:92087574-92087593 MS.gene014281:intron 30.0%
!!! AGATACAAACATTTTGGAGT+TGG + chr3.1:92087055-92087074 None:intergenic 30.0%
AAATGGCGATTGCTATGTTT+GGG - chr3.1:92087356-92087375 MS.gene014281:intron 35.0%
AAGGTCCTTAACAATCCTAA+AGG + chr3.1:92089062-92089081 None:intergenic 35.0%
AATAAGAAGTCTTCCGGATA+TGG + chr3.1:92087325-92087344 None:intergenic 35.0%
AATGTTTCAAGGATGCTTAG+TGG - chr3.1:92086731-92086750 MS.gene014281:intron 35.0%
ACTCTCAGCATTTCCATTAA+TGG - chr3.1:92087027-92087046 MS.gene014281:intron 35.0%
AGATTGTTTGACATTAGGAC+TGG - chr3.1:92087225-92087244 MS.gene014281:CDS 35.0%
AGTTCTACAGCAAAGGATAT+CGG + chr3.1:92086039-92086058 None:intergenic 35.0%
AGTTTCGTCAATTGTGTTGA+GGG + chr3.1:92089305-92089324 None:intergenic 35.0%
ATACTTTGACTCCTTTGTCA+GGG - chr3.1:92089978-92089997 MS.gene014281:intron 35.0%
ATCATGATTAATAGACTCGG+AGG + chr3.1:92088069-92088088 None:intergenic 35.0%
ATCTCTTCAAAACTCTCATG+AGG - chr3.1:92088657-92088676 MS.gene014281:CDS 35.0%
ATCTTAATTCACCCACTGAT+AGG - chr3.1:92086696-92086715 MS.gene014281:intron 35.0%
ATTGTTAGTGCATCTCAAGA+TGG - chr3.1:92086530-92086549 MS.gene014281:intron 35.0%
CAATCCTACAATCATTCTAG+TGG + chr3.1:92088874-92088893 None:intergenic 35.0%
CATGTTAGACAAACCCATAT+AGG + chr3.1:92087620-92087639 None:intergenic 35.0%
CCAGAAGATTCATTTATGCA+AGG + chr3.1:92089081-92089100 None:intergenic 35.0%
CCTTGCATAAATGAATCTTC+TGG - chr3.1:92089078-92089097 MS.gene014281:CDS 35.0%
CTCCAAAACATACTTCCTTT+AGG - chr3.1:92089044-92089063 MS.gene014281:CDS 35.0%
CTTCTTCATTTGATTGTAGG+TGG - chr3.1:92088621-92088640 MS.gene014281:CDS 35.0%
CTTGCAGATTGTTTGACATT+AGG - chr3.1:92087220-92087239 MS.gene014281:CDS 35.0%
GAAGACACTCACTTAATTAC+TGG - chr3.1:92086794-92086813 MS.gene014281:intron 35.0%
GAATCTTCTGGTCATAATAC+TGG - chr3.1:92089090-92089109 MS.gene014281:CDS 35.0%
GCTTTCGACATTTCTATATG+TGG - chr3.1:92088033-92088052 MS.gene014281:intron 35.0%
GTTCCAAATCTATTTCCATC+AGG + chr3.1:92087183-92087202 None:intergenic 35.0%
TACAGGTTTACTCATTGGAT+TGG - chr3.1:92086489-92086508 MS.gene014281:CDS 35.0%
TACTTCTACATGCGATTTAG+GGG - chr3.1:92087991-92088010 MS.gene014281:intron 35.0%
TACTTGCATCTTGCAGATAT+GGG - chr3.1:92089904-92089923 MS.gene014281:intron 35.0%
TACTTGCTCTTGTACTTATG+TGG - chr3.1:92088547-92088566 MS.gene014281:CDS 35.0%
TAGGTTATGTGTGATATAGG+GGG - chr3.1:92088789-92088808 MS.gene014281:CDS 35.0%
TATAAAGCTTCCTTGTGCAT+GGG - chr3.1:92086598-92086617 MS.gene014281:intron 35.0%
TATCTGTATCAAGAAGAGAG+AGG + chr3.1:92085884-92085903 None:intergenic 35.0%
TCATTTCTCTTTGTAGTTGC+TGG - chr3.1:92085969-92085988 MS.gene014281:intron 35.0%
TCTCTTCAAAACTCTCATGA+GGG - chr3.1:92088658-92088677 MS.gene014281:CDS 35.0%
TCTGTCAAATTCTTTCCTGA+TGG - chr3.1:92087165-92087184 MS.gene014281:CDS 35.0%
TCTTAATTCACCCACTGATA+GGG - chr3.1:92086697-92086716 MS.gene014281:intron 35.0%
TGAGCTAAAAGGTTCTACTA+TGG - chr3.1:92089468-92089487 MS.gene014281:intron 35.0%
TGCTTTAGTGTGTCCTATAT+GGG - chr3.1:92087604-92087623 MS.gene014281:intron 35.0%
TTAATCATGATGAGCTCACT+AGG - chr3.1:92088078-92088097 MS.gene014281:intron 35.0%
TTACTGACAATAGTTGCACT+AGG + chr3.1:92088578-92088597 None:intergenic 35.0%
TTACTTGCATCTTGCAGATA+TGG - chr3.1:92089903-92089922 MS.gene014281:intron 35.0%
TTCGACATTTCTATATGTGG+TGG - chr3.1:92088036-92088055 MS.gene014281:intron 35.0%
TTTAACCTGAAATGACAGCA+GGG - chr3.1:92087527-92087546 MS.gene014281:intron 35.0%
TTTGAAGAGATCCTAGATTC+AGG + chr3.1:92088648-92088667 None:intergenic 35.0%
TTTGGAAAAAGACAGGAGAA+GGG - chr3.1:92088334-92088353 MS.gene014281:intron 35.0%
! CTAGAAGATTCTAGAAGAGA+GGG + chr3.1:92089670-92089689 None:intergenic 35.0%
! GATGGAAATAGATTTGGAAC+TGG - chr3.1:92087183-92087202 MS.gene014281:CDS 35.0%
! GCTTTATAGCATGAGTTTTC+TGG + chr3.1:92086586-92086605 None:intergenic 35.0%
! GTTTTATGGGATATTACCAC+TGG - chr3.1:92086836-92086855 MS.gene014281:intron 35.0%
! TTGGAAGTTAGCTTCAATGT+TGG - chr3.1:92088824-92088843 MS.gene014281:CDS 35.0%
! TTGGGATACTTTATTGGCTA+AGG - chr3.1:92087374-92087393 MS.gene014281:intron 35.0%
! TTTGGAGTTGGATCCATTAA+TGG + chr3.1:92087043-92087062 None:intergenic 35.0%
! TTTTACTGGCCCATAAAACA+AGG + chr3.1:92088238-92088257 None:intergenic 35.0%
!! ACTCACTTAATTACTGGTTC+TGG - chr3.1:92086800-92086819 MS.gene014281:intron 35.0%
!! TTCTAGAATCTTCTAGCATG+TGG - chr3.1:92089674-92089693 MS.gene014281:intron 35.0%
!! TTGTTTTATGGGCCAGTAAA+AGG - chr3.1:92088237-92088256 MS.gene014281:intron 35.0%
!! TTTTGGAAAAAGACAGGAGA+AGG - chr3.1:92088333-92088352 MS.gene014281:intron 35.0%
!!! TGCCTAAGACCTTGTTTTAT+GGG - chr3.1:92088226-92088245 MS.gene014281:intron 35.0%
!!! TTGCCTAAGACCTTGTTTTA+TGG - chr3.1:92088225-92088244 MS.gene014281:intron 35.0%
AAGTATGAGTCTTTACCCCA+TGG + chr3.1:92089964-92089983 None:intergenic 40.0%
AGAATGTGTCCAATCGTTTG+AGG + chr3.1:92089330-92089349 None:intergenic 40.0%
ATCTTGCAGATATGGGCATT+TGG - chr3.1:92089911-92089930 MS.gene014281:intron 40.0%
ATGAACCACAATACCCTACA+AGG + chr3.1:92090009-92090028 None:intergenic 40.0%
ATGCAACAGATTGACCAGTT+GGG + chr3.1:92086643-92086662 None:intergenic 40.0%
ATTAAGTGAGTGTCTTCACC+TGG + chr3.1:92086791-92086810 None:intergenic 40.0%
CAAATGGCGATTGCTATGTT+TGG - chr3.1:92087355-92087374 MS.gene014281:intron 40.0%
CATACTTTGACTCCTTTGTC+AGG - chr3.1:92089977-92089996 MS.gene014281:intron 40.0%
CCTAGAATTGTCTCACTGAT+AGG - chr3.1:92089203-92089222 MS.gene014281:CDS 40.0%
CCTATCAGTGAGACAATTCT+AGG + chr3.1:92089206-92089225 None:intergenic 40.0%
CTATAAAGCTTCCTTGTGCA+TGG - chr3.1:92086597-92086616 MS.gene014281:intron 40.0%
CTCCAAAAACAGATGTTCTC+AGG + chr3.1:92086862-92086881 None:intergenic 40.0%
GACATACTGCAGATGTACTT+AGG - chr3.1:92086897-92086916 MS.gene014281:intron 40.0%
GAGCACGATGTGTTAAATTG+AGG + chr3.1:92086102-92086121 None:intergenic 40.0%
GAGTTTCGTCAATTGTGTTG+AGG + chr3.1:92089306-92089325 None:intergenic 40.0%
GATGCATTGGAAGCAAGATT+GGG + chr3.1:92089362-92089381 None:intergenic 40.0%
GCTAAAAGGTTCTACTATGG+TGG - chr3.1:92089471-92089490 MS.gene014281:intron 40.0%
GTCAATGTTGTTAGTTGGAG+AGG + chr3.1:92089572-92089591 None:intergenic 40.0%
GTGCTTTAGTGTGTCCTATA+TGG - chr3.1:92087603-92087622 MS.gene014281:intron 40.0%
GTTTAACCTGAAATGACAGC+AGG - chr3.1:92087526-92087545 MS.gene014281:intron 40.0%
TACGCCACTAGAATGATTGT+AGG - chr3.1:92088867-92088886 MS.gene014281:intron 40.0%
TAGTAAGTGATAAGACACCG+AGG + chr3.1:92089704-92089723 None:intergenic 40.0%
TCATCCTCGGATGTATTCAA+TGG - chr3.1:92089389-92089408 MS.gene014281:intron 40.0%
TCATCTTGTCAGTATGTTCC+AGG - chr3.1:92086770-92086789 MS.gene014281:intron 40.0%
TCCAGCAATAAGAAGTCTTC+CGG + chr3.1:92087331-92087350 None:intergenic 40.0%
TCCATTGCATTCTCCATATC+CGG - chr3.1:92087309-92087328 MS.gene014281:intron 40.0%
TGCTTTGTGTACAGGAAGTT+GGG - chr3.1:92088717-92088736 MS.gene014281:CDS 40.0%
TTTGGAGGTGAATTTCAGTC+TGG - chr3.1:92086875-92086894 MS.gene014281:intron 40.0%
! AAGGCACATTCTAGAAGAGA+GGG - chr3.1:92089236-92089255 MS.gene014281:CDS 40.0%
! AGGATGCTTAGTGGACATAA+AGG - chr3.1:92086740-92086759 MS.gene014281:intron 40.0%
! GCTAGAAGATTCTAGAAGAG+AGG + chr3.1:92089671-92089690 None:intergenic 40.0%
!! AACATCAGAAGCATCACTAC+TGG + chr3.1:92090038-92090057 None:intergenic 40.0%
!! ACGTTCTCTGAGATTGTTGA+CGG + chr3.1:92085847-92085866 None:intergenic 40.0%
!! ATTCTAGGACAAAACAGCTG+AGG + chr3.1:92089191-92089210 None:intergenic 40.0%
!! GATGCTTCTGATGTTGACTT+TGG - chr3.1:92090043-92090062 MS.gene014281:CDS 40.0%
!! TAGTTAGGAGTATTGTGCTC+TGG + chr3.1:92089541-92089560 None:intergenic 40.0%
!!! CTGAGAACATCTGTTTTTGG+AGG - chr3.1:92086860-92086879 MS.gene014281:intron 40.0%
AAACCTTTCCGGTATGACCT+TGG + chr3.1:92086064-92086083 None:intergenic 45.0%
AAGGGAGGCTGAAAAAGAGT+GGG - chr3.1:92088352-92088371 MS.gene014281:intron 45.0%
AAGGTGATTTGAGCCATCCA+TGG - chr3.1:92089944-92089963 MS.gene014281:intron 45.0%
AATTCACCCACTGATAGGGA+TGG - chr3.1:92086701-92086720 MS.gene014281:intron 45.0%
ACACAGCAGTGACAACGAAA+TGG - chr3.1:92087275-92087294 MS.gene014281:intron 45.0%
ACTGATAGGACATCTAGGCA+AGG - chr3.1:92089217-92089236 MS.gene014281:CDS 45.0%
ACTGGTCAATCTGTTGCATG+CGG - chr3.1:92086644-92086663 MS.gene014281:intron 45.0%
AGAACGTCACATAGCTGCAA+CGG - chr3.1:92085818-92085837 MS.gene014281:CDS 45.0%
AGAACTCTCCAAGGTCATAC+CGG - chr3.1:92086053-92086072 MS.gene014281:intron 45.0%
AGATTCCCATCCCTATCAGT+GGG + chr3.1:92086710-92086729 None:intergenic 45.0%
AGGTGATTTGAGCCATCCAT+GGG - chr3.1:92089945-92089964 MS.gene014281:intron 45.0%
ATCAGCAGACAAACCCAAAC+AGG + chr3.1:92088692-92088711 None:intergenic 45.0%
ATCATGTTCTGCCCTGAAGT+TGG - chr3.1:92089153-92089172 MS.gene014281:CDS 45.0%
ATCGGTGGGACCAAAAGTAA+CGG + chr3.1:92086021-92086040 None:intergenic 45.0%
ATCTTGCTTCCAATGCATCC+AGG - chr3.1:92089363-92089382 MS.gene014281:CDS 45.0%
ATGAGTCTTTACCCCATGGA+TGG + chr3.1:92089960-92089979 None:intergenic 45.0%
ATTCACCCACTGATAGGGAT+GGG - chr3.1:92086702-92086721 MS.gene014281:intron 45.0%
CATGCAACAGATTGACCAGT+TGG + chr3.1:92086644-92086663 None:intergenic 45.0%
CATGCCATTGAATACATCCG+AGG + chr3.1:92089396-92089415 None:intergenic 45.0%
CATGTCATAACCCATGCACA+AGG + chr3.1:92086611-92086630 None:intergenic 45.0%
CTACAGCAAAGGATATCGGT+GGG + chr3.1:92086035-92086054 None:intergenic 45.0%
CTTGGAGAGTTCTACAGCAA+AGG + chr3.1:92086046-92086065 None:intergenic 45.0%
GAGCAGTACGGACATTTCAT+GGG - chr3.1:92087124-92087143 MS.gene014281:intron 45.0%
GCTGGTTATGCAAAGTCTCA+AGG - chr3.1:92085987-92086006 MS.gene014281:intron 45.0%
GGAGAGGTTTCTCTCTAGTT+AGG + chr3.1:92089556-92089575 None:intergenic 45.0%
GGATATGGAGAATGCAATGG+AGG + chr3.1:92087310-92087329 None:intergenic 45.0%
GGATGCATTGGAAGCAAGAT+TGG + chr3.1:92089363-92089382 None:intergenic 45.0%
GGCCCATAAAACAAGGTCTT+AGG + chr3.1:92088231-92088250 None:intergenic 45.0%
GTCTCACTGATAGGACATCT+AGG - chr3.1:92089212-92089231 MS.gene014281:CDS 45.0%
GTGCTTTGTGTACAGGAAGT+TGG - chr3.1:92088716-92088735 MS.gene014281:CDS 45.0%
GTTATGTGTGATATAGGGGG+TGG - chr3.1:92088792-92088811 MS.gene014281:CDS 45.0%
TAGATTCCCATCCCTATCAG+TGG + chr3.1:92086711-92086730 None:intergenic 45.0%
TAGTAATCCCCAGTTCACTG+TGG + chr3.1:92087468-92087487 None:intergenic 45.0%
TCCGGAAGACTTCTTATTGC+TGG - chr3.1:92087327-92087346 MS.gene014281:intron 45.0%
TCCGGATATGGAGAATGCAA+TGG + chr3.1:92087313-92087332 None:intergenic 45.0%
TCTACAGCAAAGGATATCGG+TGG + chr3.1:92086036-92086055 None:intergenic 45.0%
TGCAACAGATTGACCAGTTG+GGG + chr3.1:92086642-92086661 None:intergenic 45.0%
TGCAGATATGGGCATTTGGA+GGG - chr3.1:92089915-92089934 MS.gene014281:intron 45.0%
TTCAAAACTCTCATGAGGGC+AGG - chr3.1:92088662-92088681 MS.gene014281:CDS 45.0%
TTGCAGATATGGGCATTTGG+AGG - chr3.1:92089914-92089933 MS.gene014281:intron 45.0%
TTGTAGGTGGTCCTGAATCT+AGG - chr3.1:92088634-92088653 MS.gene014281:CDS 45.0%
! AAACACCCTGCTGTCATTTC+AGG + chr3.1:92087535-92087554 None:intergenic 45.0%
! CAAGGCACATTCTAGAAGAG+AGG - chr3.1:92089235-92089254 MS.gene014281:CDS 45.0%
! CTTTGCTGTAGAACTCTCCA+AGG - chr3.1:92086044-92086063 MS.gene014281:intron 45.0%
! GGCCTGAGAACATCTGTTTT+TGG - chr3.1:92086857-92086876 MS.gene014281:intron 45.0%
! TAAGAGTACGCACGCAATTG+CGG - chr3.1:92086275-92086294 MS.gene014281:intron 45.0%
! TAGGGGGTGGTTACCAATTT+TGG - chr3.1:92088805-92088824 MS.gene014281:CDS 45.0%
! TGGGACTTGTTCCAAGTTAG+TGG - chr3.1:92089110-92089129 MS.gene014281:CDS 45.0%
! TGTTTGGGTTTGTCTGCTGA+TGG - chr3.1:92088691-92088710 MS.gene014281:CDS 45.0%
! TTTGGAACTGGCTCAGAAGA+TGG - chr3.1:92087195-92087214 MS.gene014281:CDS 45.0%
!! GATGGAAGTGCTTTGTGTAC+AGG - chr3.1:92088709-92088728 MS.gene014281:CDS 45.0%
!! GGTAGAACTCCCGTTACTTT+TGG - chr3.1:92086008-92086027 MS.gene014281:intron 45.0%
!! TAGGAGTATTGTGCTCTGGT+AGG + chr3.1:92089537-92089556 None:intergenic 45.0%
AACAGATGTTCTCAGGCCAG+TGG + chr3.1:92086855-92086874 None:intergenic 50.0%
ACATGTGCTTTCTCCCCAAC+TGG - chr3.1:92086626-92086645 MS.gene014281:intron 50.0%
ACGGACATTTCATGGGCATG+AGG - chr3.1:92087131-92087150 MS.gene014281:intron 50.0%
AGCCTCATACCACAGTGAAC+TGG - chr3.1:92087456-92087475 MS.gene014281:intron 50.0%
CCACAATACCCTACAAGGAG+TGG + chr3.1:92090004-92090023 None:intergenic 50.0%
CCTCATACCACAGTGAACTG+GGG - chr3.1:92087458-92087477 MS.gene014281:intron 50.0%
CGAAACTCGCCTCAAACGAT+TGG - chr3.1:92089318-92089337 MS.gene014281:CDS 50.0%
CGAGCAGTACGGACATTTCA+TGG - chr3.1:92087123-92087142 MS.gene014281:intron 50.0%
CGGACATTTCATGGGCATGA+GGG - chr3.1:92087132-92087151 MS.gene014281:intron 50.0%
GAAGGGAGGCTGAAAAAGAG+TGG - chr3.1:92088351-92088370 MS.gene014281:intron 50.0%
GATGGCATGCGAGCTTATAG+AGG - chr3.1:92089000-92089019 MS.gene014281:CDS 50.0%
GCCTCATACCACAGTGAACT+GGG - chr3.1:92087457-92087476 MS.gene014281:intron 50.0%
GGAAAAAGACAGGAGAAGGG+AGG - chr3.1:92088337-92088356 MS.gene014281:intron 50.0%
GGTGATTTGAGCCATCCATG+GGG - chr3.1:92089946-92089965 MS.gene014281:intron 50.0%
TCCACATACATCAGCGTTCC+TGG + chr3.1:92089801-92089820 None:intergenic 50.0%
TCGGTGGGACCAAAAGTAAC+GGG + chr3.1:92086020-92086039 None:intergenic 50.0%
TCTCCAAGGTCATACCGGAA+AGG - chr3.1:92086058-92086077 MS.gene014281:intron 50.0%
TGCGATTTAGGGGTGAGTTC+TGG - chr3.1:92088001-92088020 MS.gene014281:intron 50.0%
! TATGGGCATTTGGAGGGCAT+AGG - chr3.1:92089921-92089940 MS.gene014281:intron 50.0%
! TTCTAGCATGTGGCTTGCCT+CGG - chr3.1:92089684-92089703 MS.gene014281:intron 50.0%
!! CCACTCCTTGTAGGGTATTG+TGG - chr3.1:92090001-92090020 MS.gene014281:CDS 50.0%
!! TGGTAGGAGTGTTCTCACTC+TGG + chr3.1:92089521-92089540 None:intergenic 50.0%
ACAAGGAGTGGCCCTGACAA+AGG + chr3.1:92089992-92090011 None:intergenic 55.0%
CACACGAGTGTCCCACAATC+TGG + chr3.1:92087097-92087116 None:intergenic 55.0%
CAGATTGTGGGACACTCGTG+TGG - chr3.1:92087095-92087114 MS.gene014281:intron 55.0%
CCCCAGTTCACTGTGGTATG+AGG + chr3.1:92087461-92087480 None:intergenic 55.0%
CGATGCGACTGCCAGATTGT+GGG - chr3.1:92087083-92087102 MS.gene014281:intron 55.0%
GAGGGCAGGATCACCTGTTT+GGG - chr3.1:92088676-92088695 MS.gene014281:CDS 55.0%
GGATGAACGCCTGGATGCAT+TGG + chr3.1:92089375-92089394 None:intergenic 55.0%
GGTCAATCTGTTGCATGCGG+TGG - chr3.1:92086647-92086666 MS.gene014281:intron 55.0%
GTGTGGCAAGTCGAGCAGTA+CGG - chr3.1:92087112-92087131 MS.gene014281:intron 55.0%
TAACACATCGTGCTCGCTCG+TGG - chr3.1:92086107-92086126 MS.gene014281:intron 55.0%
TACATCCGAGGATGAACGCC+TGG + chr3.1:92089384-92089403 None:intergenic 55.0%
TGAGGGCAGGATCACCTGTT+TGG - chr3.1:92088675-92088694 MS.gene014281:CDS 55.0%
TGCATCCAGGCGTTCATCCT+CGG - chr3.1:92089376-92089395 MS.gene014281:CDS 55.0%
TGTCAGGGCCACTCCTTGTA+GGG - chr3.1:92089993-92090012 MS.gene014281:intron 55.0%
TTGTCAGGGCCACTCCTTGT+AGG - chr3.1:92089992-92090011 MS.gene014281:intron 55.0%
! GGCATTTGGAGGGCATAGGA+AGG - chr3.1:92089925-92089944 MS.gene014281:intron 55.0%
GCGATGCGACTGCCAGATTG+TGG - chr3.1:92087082-92087101 MS.gene014281:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 92085798 92090099 92085798 ID=MS.gene014281
chr3.1 mRNA 92085798 92090099 92085798 ID=MS.gene014281.t1;Parent=MS.gene014281
chr3.1 exon 92089994 92090099 92089994 ID=MS.gene014281.t1.exon1;Parent=MS.gene014281.t1
chr3.1 CDS 92089994 92090099 92089994 ID=cds.MS.gene014281.t1;Parent=MS.gene014281.t1
chr3.1 exon 92089818 92089912 92089818 ID=MS.gene014281.t1.exon2;Parent=MS.gene014281.t1
chr3.1 CDS 92089818 92089912 92089818 ID=cds.MS.gene014281.t1;Parent=MS.gene014281.t1
chr3.1 exon 92088979 92089403 92088979 ID=MS.gene014281.t1.exon3;Parent=MS.gene014281.t1
chr3.1 CDS 92088979 92089403 92088979 ID=cds.MS.gene014281.t1;Parent=MS.gene014281.t1
chr3.1 exon 92088502 92088862 92088502 ID=MS.gene014281.t1.exon4;Parent=MS.gene014281.t1
chr3.1 CDS 92088502 92088862 92088502 ID=cds.MS.gene014281.t1;Parent=MS.gene014281.t1
chr3.1 exon 92087144 92087257 92087144 ID=MS.gene014281.t1.exon5;Parent=MS.gene014281.t1
chr3.1 CDS 92087144 92087257 92087144 ID=cds.MS.gene014281.t1;Parent=MS.gene014281.t1
chr3.1 exon 92086431 92086512 92086431 ID=MS.gene014281.t1.exon6;Parent=MS.gene014281.t1
chr3.1 CDS 92086431 92086512 92086431 ID=cds.MS.gene014281.t1;Parent=MS.gene014281.t1
chr3.1 exon 92085798 92085883 92085798 ID=MS.gene014281.t1.exon7;Parent=MS.gene014281.t1
chr3.1 CDS 92085798 92085883 92085798 ID=cds.MS.gene014281.t1;Parent=MS.gene014281.t1
Gene Sequence

>MS.gene014281

ATGTCAGTTACGGAGCTGAAAGAACGTCACATAGCTGCAACGGAAACCGTCAACAATCTCAGAGAACGTTTGAAGCAAAGACGCCTCTCTCTTCTTGATACAGATAGTAAGTTTCATTTCATAGTTCATTCATTAGATCTATCTATTTATTTTCTAACTCAACAAACAATTTCATTTCTCTTTGTAGTTGCTGGTTATGCAAAGTCTCAAGGTAGAACTCCCGTTACTTTTGGTCCCACCGATATCCTTTGCTGTAGAACTCTCCAAGGTCATACCGGAAAGGTTTATTCTATTCTTTTTTCCTCAATTTAACACATCGTGCTCGCTCGTGGTAGCTACAATTATTATTATTATTCTAATTTCTTCTTAATCGGTACCAACCATTAATTTGTGTTCTGTTCAGTTGACCGTAACTAACTTCAATTTTACGGTACTCAACTCAACGCTAATGCTTCATTTCATTAAGGGAACATAATGTAAGAGTACGCACGCAATTGCGGTTTGTTTAGTTGTTGTTATTATTATTATTAAGCTAAAATCGGTACTTAGATCTTTGTTGCTATAATATAAGGGAATTGCTGTATTGGGTTTCGAGTTAGATTCATTTACTTCTATCATCACTTATAGCAATTTTTTTGTTAGTTGTGAGTGAGATATGCACGTGCAATGAATAACGCATTCATTTAAATTTTACAGGTTTACTCATTGGATTGGACTTCAGAAAAGAATCGAATTGTTAGTGCATCTCAAGATGGAAGATTAATAGTATGGAATGCTCTAACAAGCCAGAAAACTCATGCTATAAAGCTTCCTTGTGCATGGGTTATGACATGTGCTTTCTCCCCAACTGGTCAATCTGTTGCATGCGGTGGCCTTGACAGTGTTTGTTCTATTTTCAATCTTAATTCACCCACTGATAGGGATGGGAATCTAAATGTTTCAAGGATGCTTAGTGGACATAAAGGTTATGTTTCATCTTGTCAGTATGTTCCAGGTGAAGACACTCACTTAATTACTGGTTCTGGTGATCAAACATGTGTTTTATGGGATATTACCACTGGCCTGAGAACATCTGTTTTTGGAGGTGAATTTCAGTCTGGACATACTGCAGATGTACTTAGGTATTGTTTAAGTTGTTTTAATAGTAGCGAGATCTATATGAAAATCAGTTGGGCATAGTTTTTTTTTAGTATGGAATCATCGCTAAGAAATATTTCTTTTCTTTGCTCACTCTCAGCATTTCCATTAATGGATCCAACTCCAAAATGTTTGTATCTGGTTCTTGCGATGCGACTGCCAGATTGTGGGACACTCGTGTGGCAAGTCGAGCAGTACGGACATTTCATGGGCATGAGGGTGATGTTAATTCTGTCAAATTCTTTCCTGATGGAAATAGATTTGGAACTGGCTCAGAAGATGGAACTTGCAGATTGTTTGACATTAGGACTGGACACCAACTTCAAGTATATAATCAGCAACACAGCAGTGACAACGAAATGGCACATGTGACCTCCATTGCATTCTCCATATCCGGAAGACTTCTTATTGCTGGATATACAAATGGCGATTGCTATGTTTGGGATACTTTATTGGCTAAGGTAATTGTTGCTTTAGTGTGATTATGTAAAACAAAAGTAGGGCGTTTTCTTTCTACTCATAGCCTCATACCACAGTGAACTGGGGATTACTATGTTTGCAACACTTTTGGCAAAGATAATTGGTTTTTCAGTTTAACCTGAAATGACAGCAGGGTGTTTTATTTCTACTTATTATATTTTGGGAGATTTTATTTCGAAAGGTAGTTGGTGCTTTAGTGTGTCCTATATGGGTTTGTCTAACATGTTAAAACAACTAAAAGCAGTAATTTTTTATTGAAAACAACAATTATTTATTAAAAAGCGACACATTTAATATAAAATGCACAAGTTCCAAGTCAAAGTTACTACTTTAAATTTCTTAACATGACCCATATAGAAAATAAGATTCTTTGTGACGCTTAATAATTTTTTATTGAAAACAACTAAATTTCTTAACAATTATTTATTAAAAAGCGACACATTTAATATAAAATGCACAAGTTCCAAGTCAAAGTTACTACTTTAAATTTCTTAACATGACCCATATAGAAAATAAGATTCTGTGACACATACCAACAGCATGTTTAGTTTCTATTAATTAACTAATTGTTTGCTTTACTTCTACATGCGATTTAGGGGTGAGTTCTGGTTCCATTATGCTTTCGACATTTCTATATGTGGTGGAATTGTGCCTCCGAGTCTATTAATCATGATGAGCTCACTAGGCATTATCTTGTATATAAATTGGCTCGTAACTTTCTGATATTCTTTTTGCTATCACAATACCTTTTGATGTGGAGCTTTTATACCGCTGTTTATTTTATTTTGTACTTCTATTTGTCTCAAGTCATTGCCTAAGACCTTGTTTTATGGGCCAGTAAAAGGAGTTAATATGAATTATTTGAAGGAAATTTTTTTCTTATTTTGAAGGTTTATCTTCTGGTTGAGATTTTTCTTATTTTGGAAAAAGACAGGAGAAGGGAGGCTGAAAAAGAGTGGGTGTTCCAACTCCCATTAATATAGACTAGGAGTATATTAAATCTCAGGCTTGGCAAACTTGCCATATTTTTTGAAAAAAGAAAAACTGAACAAAAACAAAATGCAATTCTGTCTTGTAACATCTAATCATAGCATGATATTTTCTGACGCTGCTTTCTCTTTCCATTTATTTGTACTTGCTCTTGTACTTATGTGGTTGTGCCTAGTGCAACTATTGTCAGTAAGACTGACTAACTGACTATACTTGCTTCTTCATTTGATTGTAGGTGGTCCTGAATCTAGGATCTCTTCAAAACTCTCATGAGGGCAGGATCACCTGTTTGGGTTTGTCTGCTGATGGAAGTGCTTTGTGTACAGGAAGTTGGGACACAAATTTAAAGGTGAGCAAACATTTTAGTCTGATACATAAAACTTATAGGTTATGTGTGATATAGGGGGTGGTTACCAATTTTGGAAGTTAGCTTCAATGTTGGTGATATTTTTCATGTTTTTTTACGCCACTAGAATGATTGTAGGATTGAACTTTTAAAGAACTAGGCTTTTGTGTTAGTTTATAAGCTTTCCTTAAGGTTAAACCTTTAAAAAGAATTAGGAATTAAGCAAAAATAAAAAAGCATTATATTTATGATGGCATGCGAGCTTATAGAGGTTTAACATGTTCTGAGTTGAACTCCAAAACATACTTCCTTTAGGATTGTTAAGGACCTTGCATAAATGAATCTTCTGGTCATAATACTGGGACTTGTTCCAAGTTAGTGGTAAATTTTTTGGTTAGAAAAATCATGTTCTGCCCTGAAGTTGGTATCATATTTTTCCTCAGCTGTTTTGTCCTAGAATTGTCTCACTGATAGGACATCTAGGCAAGGCACATTCTAGAAGAGAGGGAATATGAGTTAGAACTCAGTTTCTCTGTGTTTCATCATCACTGCCCTCAACACAATTGACGAAACTCGCCTCAAACGATTGGACACATTCTTCAAATCTTCCCAATCTTGCTTCCAATGCATCCAGGCGTTCATCCTCGGATGTATTCAATGGCATGATAGAACTTGTAAAATCAAGATAACAAAACTGTATTTACTGAATGATAATGGTGAGCTAAAAGGTTCTACTATGGTGGAATAACATAAAACAAAAGGATAAACCAGAGTGAGAACACTCCTACCAGAGCACAATACTCCTAACTAGAGAGAAACCTCTCCAACTAACAACATTGACTCAATCACTAGCCTTCCCTCTCTTTTATAACAAAAATATCTCTAAAATAAAGAACTTTGCTAACTAACTCATATTCCCTCTCTTCTAGAATCTTCTAGCATGTGGCTTGCCTCGGTGTCTTATCACTTACTATACTAACATTTTTTTTTCTTTGATAATATTACTATACTATGGTAACCAATGCATATTTGTATCAAATAATATATCCAGGAACGCTGATGTATGTGGATTTCACTGATTAAATATATGGATGTGGTATTTTCTGAGTGCCGTCTATCTTGAAAAAATGTTTAGGCGTTAGTTTGACATAATTACTTGCATCTTGCAGATATGGGCATTTGGAGGGCATAGGAAGGTGATTTGAGCCATCCATGGGGTAAAGACTCATACTTTGACTCCTTTGTCAGGGCCACTCCTTGTAGGGTATTGTGGTTCATCACAATCCAGTAGTGATGCTTCTGATGTTGACTTTGGTCAAAAATTGGAAGACAAAGTTTATAACCTTTAG

Protein sequence

>MS.gene014281.t1

MSVTELKERHIAATETVNNLRERLKQRRLSLLDTDIAGYAKSQGRTPVTFGPTDILCCRTLQGHTGKVYSLDWTSEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLNVSRMLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSNSKMFVSGSCDATARLWDTRVASRAVRTFHGHEGDVNSVKFFPDGNRFGTGSEDGTCRLFDIRTGHQLQVYNQQHSSDNEMAHVTSIAFSISGRLLIAGYTNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKAFILGCIQWHDRTCKIKITKLYLLNDNGYCGSSQSSSDASDVDFGQKLEDKVYNL