AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063165


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063165.t1 MTR_3g116500 98.656 372 5 0 1 372 1 372 0.0 755
MS.gene063165.t1 MTR_3g116500 98.092 262 5 0 111 372 1 262 0.0 527
MS.gene063165.t1 MTR_1g054300 24.207 347 207 10 60 370 156 482 1.96e-16 81.6
MS.gene063165.t1 MTR_5g022690 28.139 231 143 9 150 377 273 483 5.04e-16 80.1
MS.gene063165.t1 MTR_5g022690 24.201 219 152 4 57 275 271 475 3.93e-11 65.1
MS.gene063165.t1 MTR_2g012630 31.373 204 123 7 172 375 31 217 5.16e-16 80.9
MS.gene063165.t1 MTR_2g012630 31.373 204 123 7 172 375 31 217 6.05e-16 80.9
MS.gene063165.t1 MTR_2g436510 25.676 222 146 7 150 371 164 366 1.09e-15 79.3
MS.gene063165.t1 MTR_3g106080 26.894 264 168 7 61 314 415 663 1.53e-15 79.3
MS.gene063165.t1 MTR_3g106080 27.523 218 138 7 151 367 414 612 5.37e-14 74.3
MS.gene063165.t1 MTR_3g106080 28.571 217 130 8 110 324 422 615 1.19e-12 70.1
MS.gene063165.t1 MTR_4g095058 25.000 364 212 16 35 371 206 535 2.32e-15 78.6
MS.gene063165.t1 MTR_4g095058 25.207 242 146 10 60 287 325 545 1.55e-13 72.8
MS.gene063165.t1 MTR_4g119620 28.571 224 144 7 148 367 19 230 2.40e-15 77.0
MS.gene063165.t1 MTR_4g095058 25.000 364 212 16 35 371 204 533 2.46e-15 78.6
MS.gene063165.t1 MTR_4g095058 25.207 242 146 10 60 287 323 543 1.50e-13 72.8
MS.gene063165.t1 MTR_1g072140 24.060 266 185 5 59 324 21 269 4.02e-15 76.3
MS.gene063165.t1 MTR_1g072140 28.251 223 143 7 57 275 103 312 1.73e-14 74.3
MS.gene063165.t1 MTR_1g072140 30.114 176 109 6 150 325 21 182 3.43e-12 67.4
MS.gene063165.t1 MTR_5g016350 22.881 354 213 14 47 371 154 476 9.49e-15 76.3
MS.gene063165.t1 MTR_5g016350 23.967 242 149 9 60 287 266 486 9.18e-12 67.0
MS.gene063165.t1 MTR_5g016350 22.881 354 213 14 47 371 218 540 1.79e-14 75.9
MS.gene063165.t1 MTR_5g016350 23.967 242 149 9 60 287 330 550 1.21e-11 67.0
MS.gene063165.t1 MTR_5g016370 23.077 351 214 13 47 371 232 552 2.18e-14 75.5
MS.gene063165.t1 MTR_5g016370 22.822 241 151 9 60 286 342 561 1.65e-13 72.8
MS.gene063165.t1 MTR_7g086360 26.496 234 153 7 151 383 50 265 3.75e-14 73.6
MS.gene063165.t1 MTR_7g086360 21.786 280 195 8 61 334 51 312 1.60e-12 68.6
MS.gene063165.t1 MTR_2g102277 23.529 255 178 4 68 322 60 297 5.92e-14 74.3
MS.gene063165.t1 MTR_2g102277 23.529 255 178 4 68 322 60 297 6.25e-14 74.3
MS.gene063165.t1 MTR_4g011950 23.137 255 179 4 68 322 60 297 2.41e-13 72.4
MS.gene063165.t1 MTR_6g004040 27.027 259 159 10 122 378 32 262 3.60e-13 72.0
MS.gene063165.t1 MTR_8g106790 24.251 334 212 11 60 372 10 323 6.20e-13 69.7
MS.gene063165.t1 MTR_8g038550 24.497 298 196 11 73 367 191 462 1.39e-12 70.1
MS.gene063165.t1 MTR_4g102520 23.197 319 221 10 58 371 287 586 2.40e-12 69.3
MS.gene063165.t1 MTR_2g054920 25.094 267 176 7 60 325 56 299 4.39e-12 67.4
MS.gene063165.t1 MTR_1g097140 25.000 312 202 10 61 369 119 401 6.00e-12 67.4
MS.gene063165.t1 MTR_1g097140 27.451 255 161 9 110 363 83 314 8.52e-12 67.0
MS.gene063165.t1 MTR_2g102267 22.957 257 179 5 59 314 53 291 6.51e-12 66.6
MS.gene063165.t1 MTR_3g045130 24.419 258 169 8 113 369 278 510 7.65e-12 67.4
MS.gene063165.t1 MTR_3g075400 23.779 307 207 9 57 360 217 499 4.46e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063165.t1 AT4G34460 79.088 373 75 2 1 372 1 371 0.0 586
MS.gene063165.t1 AT4G34460 78.820 373 71 3 1 372 1 366 0.0 575
MS.gene063165.t1 AT4G34460 79.104 335 67 2 1 334 1 333 0.0 525
MS.gene063165.t1 AT4G34460 79.805 307 59 2 67 372 5 309 0.0 506
MS.gene063165.t1 AT4G02730 25.338 296 199 10 38 332 19 293 3.71e-19 88.6
MS.gene063165.t1 AT4G02730 26.147 218 145 6 150 367 37 238 5.17e-14 73.2
MS.gene063165.t1 AT5G67320 26.146 371 206 15 33 366 226 565 2.08e-18 87.8
MS.gene063165.t1 AT5G67320 23.404 235 157 8 60 286 360 579 1.44e-13 73.2
MS.gene063165.t1 AT5G67320 25.957 235 141 8 150 369 259 475 3.95e-11 65.5
MS.gene063165.t1 AT5G52820 23.238 383 212 9 57 369 101 471 7.27e-18 85.9
MS.gene063165.t1 AT3G16650 27.477 222 141 9 150 371 164 365 1.78e-17 84.7
MS.gene063165.t1 AT5G25150 27.419 248 165 6 49 296 402 634 2.85e-17 84.7
MS.gene063165.t1 AT5G25150 30.612 245 142 9 151 394 413 630 1.09e-16 82.8
MS.gene063165.t1 AT5G25150 27.419 248 165 6 49 296 402 634 3.10e-17 84.3
MS.gene063165.t1 AT5G25150 29.796 245 144 8 151 394 413 630 1.02e-16 82.8
MS.gene063165.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.14e-16 81.6
MS.gene063165.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene063165.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene063165.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene063165.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.27e-16 81.6
MS.gene063165.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.36e-16 81.6
MS.gene063165.t1 AT2G41500 26.459 257 160 9 113 367 304 533 3.42e-16 80.9
MS.gene063165.t1 AT2G41500 26.459 257 160 9 113 367 304 533 3.42e-16 80.9
MS.gene063165.t1 AT3G15980 23.273 275 188 7 52 323 2 256 3.70e-16 81.3
MS.gene063165.t1 AT1G52360 22.909 275 189 7 52 323 2 256 2.18e-15 79.0
MS.gene063165.t1 AT1G52360 23.529 255 178 4 68 322 60 297 1.39e-14 76.6
MS.gene063165.t1 AT1G52360 22.909 275 189 7 52 323 46 300 2.28e-15 79.0
MS.gene063165.t1 AT1G52360 23.529 255 178 4 68 322 104 341 1.32e-14 76.6
MS.gene063165.t1 AT1G52360 22.909 275 189 7 52 323 2 256 2.32e-15 79.0
MS.gene063165.t1 AT1G52360 23.529 255 178 4 68 322 60 297 1.43e-14 76.6
MS.gene063165.t1 AT1G52360 22.909 275 189 7 52 323 2 256 2.32e-15 79.0
MS.gene063165.t1 AT1G52360 23.529 255 178 4 68 322 60 297 1.43e-14 76.6
MS.gene063165.t1 AT5G13480 26.174 298 191 10 73 367 142 413 2.50e-15 78.6
MS.gene063165.t1 AT5G13480 26.174 298 191 10 73 367 119 390 2.99e-15 78.2
MS.gene063165.t1 AT5G13480 26.174 298 191 10 73 367 119 390 3.19e-15 78.2
MS.gene063165.t1 AT5G13480 26.174 298 191 10 73 367 131 402 4.08e-15 77.8
MS.gene063165.t1 AT1G11160 31.122 196 118 7 172 367 31 209 5.32e-15 77.8
MS.gene063165.t1 AT4G15900 26.577 222 144 8 150 371 170 372 5.47e-15 77.0
MS.gene063165.t1 AT1G11160 31.122 196 118 7 172 367 31 209 5.72e-15 77.8
MS.gene063165.t1 AT1G11160 31.122 196 118 7 172 367 31 209 6.24e-15 77.8
MS.gene063165.t1 AT5G08390 28.922 204 128 7 172 375 32 218 9.24e-15 77.0
MS.gene063165.t1 AT1G61210 30.612 196 119 7 172 367 31 209 1.55e-14 76.3
MS.gene063165.t1 AT1G61210 30.612 196 119 7 172 367 31 209 1.93e-14 76.3
MS.gene063165.t1 AT1G61210 30.612 196 119 7 172 367 31 209 1.95e-14 76.3
MS.gene063165.t1 AT1G79990 23.137 255 179 4 68 322 60 297 3.73e-14 75.1
MS.gene063165.t1 AT1G71840 25.159 314 205 11 61 369 109 397 3.79e-14 74.3
MS.gene063165.t1 AT1G79990 23.137 255 179 4 68 322 60 297 3.88e-14 75.1
MS.gene063165.t1 AT5G23430 28.922 204 128 7 172 375 32 218 4.49e-14 74.7
MS.gene063165.t1 AT5G23430 24.843 318 192 15 63 366 14 298 4.69e-11 65.5
MS.gene063165.t1 AT5G23430 28.922 204 128 7 172 375 32 218 4.49e-14 74.7
MS.gene063165.t1 AT5G23430 24.843 318 192 15 63 366 14 298 4.69e-11 65.5
MS.gene063165.t1 AT5G23430 28.922 204 128 7 172 375 32 218 4.65e-14 74.7
MS.gene063165.t1 AT5G23430 24.843 318 192 15 63 366 14 298 4.69e-11 65.5
MS.gene063165.t1 AT1G11160 30.723 166 103 5 202 367 14 167 1.02e-13 73.9
MS.gene063165.t1 AT1G15470 26.000 250 143 7 60 275 51 292 1.37e-13 72.0
MS.gene063165.t1 AT2G33340 26.246 301 143 14 122 371 237 509 3.00e-13 72.0
MS.gene063165.t1 AT2G33340 26.246 301 143 14 122 371 237 509 3.00e-13 72.0
MS.gene063165.t1 AT3G15610 26.855 283 160 8 60 308 56 325 4.18e-13 70.5
MS.gene063165.t1 AT3G49660 24.068 295 198 10 47 334 6 281 7.25e-13 69.7
MS.gene063165.t1 AT3G49660 23.502 217 155 4 59 275 107 312 3.53e-11 64.3
MS.gene063165.t1 AT4G29830 31.183 186 104 8 97 276 152 319 2.15e-12 68.2
MS.gene063165.t1 AT3G18130 23.567 314 199 11 80 372 31 324 1.37e-11 65.9
MS.gene063165.t1 AT2G43770 23.162 272 178 8 110 370 56 307 1.42e-11 65.9
MS.gene063165.t1 AT2G43770 21.071 280 197 9 61 334 49 310 3.77e-11 64.7
MS.gene063165.t1 AT1G10580 23.975 317 213 11 60 369 277 572 1.72e-11 66.6
MS.gene063165.t1 AT1G52730 26.400 250 142 6 60 275 56 297 2.93e-11 65.1
MS.gene063165.t1 AT1G52730 26.400 250 142 6 60 275 56 297 2.93e-11 65.1

Find 98 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGTTTGGGATACTTTAT+TGG 0.165728 3.2:-92011660 MS.gene063165:CDS
ACTCTCAGCATTTCCATTAA+TGG 0.169125 3.2:-92012001 MS.gene063165:intron
AGAACCAGATACAAACATTT+TGG 0.219891 3.2:+92011970 None:intergenic
TTTGGAGTTGGATCCATTAA+TGG 0.230052 3.2:+92011988 None:intergenic
TTTCCTGATGGAAATAGATT+TGG 0.276868 3.2:-92011851 MS.gene063165:CDS
AACTCCAAAATGTTTGTATC+TGG 0.288983 3.2:-92011974 MS.gene063165:CDS
AAGAATAGAATAAACCTTTC+CGG 0.299760 3.2:+92012956 None:intergenic
TGAGGGCAGGATCACCTGTT+TGG 0.300230 3.2:-92010352 MS.gene063165:CDS
GAAGACACTCACTTAATTAC+TGG 0.314223 3.2:-92012234 MS.gene063165:CDS
CTTGCAGATTGTTTGACATT+AGG 0.319869 3.2:-92011808 MS.gene063165:CDS
GGTAGAACTCCCGTTACTTT+TGG 0.320614 3.2:-92013020 MS.gene063165:CDS
AAGTTGGGACACAAATTTAA+AGG 0.324926 3.2:-92010295 MS.gene063165:intron
TCCGGAAGACTTCTTATTGC+TGG 0.330505 3.2:-92011701 MS.gene063165:CDS
CAAATGGCGATTGCTATGTT+TGG 0.331633 3.2:-92011673 MS.gene063165:CDS
AAGATGGAAGATTAATAGTA+TGG 0.336164 3.2:-92012482 MS.gene063165:CDS
TCATCTTGTCAGTATGTTCC+AGG 0.349435 3.2:-92012258 MS.gene063165:CDS
GAGGGCAGGATCACCTGTTT+GGG 0.353821 3.2:-92010351 MS.gene063165:CDS
ATCTTAATTCACCCACTGAT+AGG 0.354475 3.2:-92012332 MS.gene063165:CDS
AATAAGAAGTCTTCCGGATA+TGG 0.370745 3.2:+92011706 None:intergenic
TTTGAAGAGATCCTAGATTC+AGG 0.375592 3.2:+92010382 None:intergenic
CGAGCAGTACGGACATTTCA+TGG 0.392393 3.2:-92011905 MS.gene063165:CDS
AAATGGCGATTGCTATGTTT+GGG 0.404058 3.2:-92011672 MS.gene063165:CDS
TCCAGCAATAAGAAGTCTTC+CGG 0.412039 3.2:+92011700 None:intergenic
CACACGAGTGTCCCACAATC+TGG 0.420398 3.2:+92011934 None:intergenic
CTTATTGCTGGATATACAAA+TGG 0.425275 3.2:-92011689 MS.gene063165:CDS
TGCTTTGTGTACAGGAAGTT+GGG 0.428629 3.2:-92010310 MS.gene063165:CDS
TCCATTGCATTCTCCATATC+CGG 0.434553 3.2:-92011719 MS.gene063165:CDS
AATGTTTCAAGGATGCTTAG+TGG 0.436820 3.2:-92012297 MS.gene063165:CDS
AGGATGCTTAGTGGACATAA+AGG 0.438435 3.2:-92012288 MS.gene063165:CDS
GTGCTTTGTGTACAGGAAGT+TGG 0.441799 3.2:-92010311 MS.gene063165:CDS
TTGTAGGTGGTCCTGAATCT+AGG 0.445164 3.2:-92010393 MS.gene063165:intron
ATCAGCAGACAAACCCAAAC+AGG 0.447682 3.2:+92010338 None:intergenic
CTGTATTTACTGAATGATAA+TGG 0.447942 3.2:-92009582 MS.gene063165:intron
ACGTTCTCTGAGATTGTTGA+CGG 0.459466 3.2:+92013184 None:intergenic
ACATGTGCTTTCTCCCCAAC+TGG 0.465526 3.2:-92012402 MS.gene063165:CDS
TACAGGTTTACTCATTGGAT+TGG 0.465737 3.2:-92012539 MS.gene063165:intron
GATGCTTCTGATGTTGACTT+TGG 0.469044 3.2:-92008984 MS.gene063165:CDS
TCTGTCAAATTCTTTCCTGA+TGG 0.470264 3.2:-92011863 MS.gene063165:CDS
GTTCCAAATCTATTTCCATC+AGG 0.472273 3.2:+92011848 None:intergenic
TTGGGATACTTTATTGGCTA+AGG 0.475505 3.2:-92011654 MS.gene063165:intron
CCACTCCTTGTAGGGTATTG+TGG 0.476279 3.2:-92009026 MS.gene063165:intron
TGTTTGGGTTTGTCTGCTGA+TGG 0.484615 3.2:-92010336 MS.gene063165:CDS
TGCATCCAGGCGTTCATCCT+CGG 0.490721 3.2:-92009651 MS.gene063165:intron
AGTTCTACAGCAAAGGATAT+CGG 0.491736 3.2:+92012992 None:intergenic
ACTCACTTAATTACTGGTTC+TGG 0.492296 3.2:-92012228 MS.gene063165:CDS
ATGCAACAGATTGACCAGTT+GGG 0.494182 3.2:+92012388 None:intergenic
TTTGGAGGTGAATTTCAGTC+TGG 0.494970 3.2:-92012153 MS.gene063165:CDS
TTTGGAACTGGCTCAGAAGA+TGG 0.495617 3.2:-92011833 MS.gene063165:CDS
GATGGAAATAGATTTGGAAC+TGG 0.496817 3.2:-92011845 MS.gene063165:CDS
ACACAGCAGTGACAACGAAA+TGG 0.496865 3.2:-92011753 MS.gene063165:CDS
CTATAAAGCTTCCTTGTGCA+TGG 0.503577 3.2:-92012431 MS.gene063165:CDS
AACATCAGAAGCATCACTAC+TGG 0.504542 3.2:+92008992 None:intergenic
GATGGAAGTGCTTTGTGTAC+AGG 0.510526 3.2:-92010318 MS.gene063165:CDS
GCTGATTATATACTTGAAGT+TGG 0.510768 3.2:+92011777 None:intergenic
ATGGGAATCTAAATGTTTCA+AGG 0.511123 3.2:-92012308 MS.gene063165:CDS
AAACCTTTCCGGTATGACCT+TGG 0.513421 3.2:+92012967 None:intergenic
GCGATGCGACTGCCAGATTG+TGG 0.518560 3.2:-92011946 MS.gene063165:CDS
TTCAAAACTCTCATGAGGGC+AGG 0.518906 3.2:-92010365 MS.gene063165:CDS
TCGGTGGGACCAAAAGTAAC+GGG 0.529222 3.2:+92013011 None:intergenic
TCTTAATTCACCCACTGATA+GGG 0.531433 3.2:-92012331 MS.gene063165:CDS
TCATCCTCGGATGTATTCAA+TGG 0.538527 3.2:-92009638 MS.gene063165:CDS
CATGCAACAGATTGACCAGT+TGG 0.543738 3.2:+92012387 None:intergenic
AGAACTCTCCAAGGTCATAC+CGG 0.550488 3.2:-92012975 MS.gene063165:CDS
GACATACTGCAGATGTACTT+AGG 0.555324 3.2:-92012131 MS.gene063165:intron
ATTCACCCACTGATAGGGAT+GGG 0.578801 3.2:-92012326 MS.gene063165:CDS
CGATGCGACTGCCAGATTGT+GGG 0.579543 3.2:-92011945 MS.gene063165:CDS
TGCAACAGATTGACCAGTTG+GGG 0.579784 3.2:+92012389 None:intergenic
AGATTGTTTGACATTAGGAC+TGG 0.580110 3.2:-92011803 MS.gene063165:CDS
GGTCAATCTGTTGCATGCGG+TGG 0.581213 3.2:-92012381 MS.gene063165:CDS
AATTCACCCACTGATAGGGA+TGG 0.581894 3.2:-92012327 MS.gene063165:CDS
ATTGTTAGTGCATCTCAAGA+TGG 0.582738 3.2:-92012498 MS.gene063165:CDS
GCTGGTTATGCAAAGTCTCA+AGG 0.587086 3.2:-92013041 MS.gene063165:CDS
TATAAAGCTTCCTTGTGCAT+GGG 0.587824 3.2:-92012430 MS.gene063165:CDS
ATCGGTGGGACCAAAAGTAA+CGG 0.588862 3.2:+92013010 None:intergenic
CGGACATTTCATGGGCATGA+GGG 0.590801 3.2:-92011896 MS.gene063165:CDS
TAGATTCCCATCCCTATCAG+TGG 0.592534 3.2:+92012320 None:intergenic
CTTTGCTGTAGAACTCTCCA+AGG 0.594435 3.2:-92012984 MS.gene063165:CDS
GAGCAGTACGGACATTTCAT+GGG 0.596617 3.2:-92011904 MS.gene063165:CDS
AGATTCCCATCCCTATCAGT+GGG 0.597288 3.2:+92012321 None:intergenic
CTTGGAGAGTTCTACAGCAA+AGG 0.598090 3.2:+92012985 None:intergenic
ATCTCTTCAAAACTCTCATG+AGG 0.599478 3.2:-92010370 MS.gene063165:CDS
ACGGACATTTCATGGGCATG+AGG 0.601876 3.2:-92011897 MS.gene063165:CDS
ATTAAGTGAGTGTCTTCACC+TGG 0.602650 3.2:+92012240 None:intergenic
AGAACGTCACATAGCTGCAA+CGG 0.607199 3.2:-92013210 MS.gene063165:CDS
TCCGGATATGGAGAATGCAA+TGG 0.614685 3.2:+92011718 None:intergenic
GTGTGGCAAGTCGAGCAGTA+CGG 0.621594 3.2:-92011916 MS.gene063165:CDS
CATGTCATAACCCATGCACA+AGG 0.635502 3.2:+92012420 None:intergenic
AAATAGAACAAACACTGTCA+AGG 0.643390 3.2:+92012358 None:intergenic
TCTACAGCAAAGGATATCGG+TGG 0.646947 3.2:+92012995 None:intergenic
TCTCTTCAAAACTCTCATGA+GGG 0.650264 3.2:-92010369 MS.gene063165:CDS
AACAGATGTTCTCAGGCCAG+TGG 0.652607 3.2:+92012176 None:intergenic
TCTCCAAGGTCATACCGGAA+AGG 0.660052 3.2:-92012970 MS.gene063165:intron
CTACAGCAAAGGATATCGGT+GGG 0.670691 3.2:+92012996 None:intergenic
CATGCCATTGAATACATCCG+AGG 0.674309 3.2:+92009634 None:intergenic
CAGATTGTGGGACACTCGTG+TGG 0.674572 3.2:-92011933 MS.gene063165:CDS
GGATATGGAGAATGCAATGG+AGG 0.676943 3.2:+92011721 None:intergenic
ACTGGTCAATCTGTTGCATG+CGG 0.714193 3.2:-92012384 MS.gene063165:CDS
TATCTGTATCAAGAAGAGAG+AGG 0.734700 3.2:+92013147 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTAAGCTAAAAT+CGG - chr3.2:92009469-92009488 MS.gene063165:intron 10.0%
!!! AAATTTTTTTCTTATTTTGA+AGG - chr3.2:92011436-92011455 MS.gene063165:intron 10.0%
!!! ATTTCTACTTATTATATTTT+GGG - chr3.2:92010708-92010727 MS.gene063165:intron 10.0%
!!! TATTTCTACTTATTATATTT+TGG - chr3.2:92010707-92010726 MS.gene063165:intron 10.0%
!!! TTTTCTTTTTTCAAAAAATA+TGG + chr3.2:92011591-92011610 None:intergenic 10.0%
!! AGTTAATATGAATTATTTGA+AGG - chr3.2:92011413-92011432 MS.gene063165:intron 15.0%
!! TATTCTAATTTCTTCTTAAT+CGG - chr3.2:92009301-92009320 MS.gene063165:intron 15.0%
!!! AAAAAGCATTATATTTATGA+TGG - chr3.2:92012135-92012154 MS.gene063165:CDS 15.0%
!!! AAAGAATCTTATTTTCTATA+TGG + chr3.2:92010920-92010939 None:intergenic 15.0%
!!! AAGAATCTTATTTTCTATAT+GGG + chr3.2:92010919-92010938 None:intergenic 15.0%
!!! ATATTTTTGTTATAAAAGAG+AGG + chr3.2:92012764-92012783 None:intergenic 15.0%
!!! TAATTCCTAATTCTTTTTAA+AGG + chr3.2:92012105-92012124 None:intergenic 15.0%
!!! TATTTTTGTTATAAAAGAGA+GGG + chr3.2:92012763-92012782 None:intergenic 15.0%
!!! TTAAACCTTTAAAAAGAATT+AGG - chr3.2:92012097-92012116 MS.gene063165:intron 15.0%
!!! TTGATAATATTACTATACTA+TGG - chr3.2:92012896-92012915 MS.gene063165:intron 15.0%
!! ATCTTTGTTGCTATAATATA+AGG - chr3.2:92009499-92009518 MS.gene063165:intron 20.0%
!! GATTATGTAAAACAAAAGTA+GGG - chr3.2:92010567-92010586 MS.gene063165:intron 20.0%
!! GCATTATCTTGTATATAAAT+TGG - chr3.2:92011253-92011272 MS.gene063165:intron 20.0%
!! GTACAAAATAAAATAAACAG+CGG + chr3.2:92011339-92011358 None:intergenic 20.0%
!! TATTTGATACAAATATGCAT+TGG + chr3.2:92012925-92012944 None:intergenic 20.0%
!! TCTATCTTGAAAAAATGTTT+AGG - chr3.2:92013017-92013036 MS.gene063165:CDS 20.0%
!! TCTTTGTTGCTATAATATAA+GGG - chr3.2:92009500-92009519 MS.gene063165:intron 20.0%
!! TGATTATGTAAAACAAAAGT+AGG - chr3.2:92010566-92010585 MS.gene063165:intron 20.0%
!!! AAACATTTTTTCAAGATAGA+CGG + chr3.2:92013017-92013036 None:intergenic 20.0%
!!! ACAGAATCTTATTTTCTATA+TGG + chr3.2:92011072-92011091 None:intergenic 20.0%
!!! CAGAATCTTATTTTCTATAT+GGG + chr3.2:92011071-92011090 None:intergenic 20.0%
!!! GATTTCACTGATTAAATATA+TGG - chr3.2:92012972-92012991 MS.gene063165:CDS 20.0%
!!! TTTTTAAAGGTTTAACCTTA+AGG + chr3.2:92012092-92012111 None:intergenic 20.0%
! AAAAATATGATACCAACTTC+AGG + chr3.2:92012321-92012340 None:intergenic 25.0%
! AAAATATGATACCAACTTCA+GGG + chr3.2:92012320-92012339 None:intergenic 25.0%
! AAGAATAGAATAAACCTTTC+CGG + chr3.2:92009227-92009246 None:intergenic 25.0%
! AAGATGGAAGATTAATAGTA+TGG - chr3.2:92009698-92009717 MS.gene063165:intron 25.0%
! ACTGATTAAATATATGGATG+TGG - chr3.2:92012978-92012997 MS.gene063165:CDS 25.0%
! AGATCTATATGAAAATCAGT+TGG - chr3.2:92010100-92010119 MS.gene063165:intron 25.0%
! ATACTCCTAGTCTATATTAA+TGG + chr3.2:92011542-92011561 None:intergenic 25.0%
! CAAAAAATTTACCACTAACT+TGG + chr3.2:92012277-92012296 None:intergenic 25.0%
! CGTAAAATTGAAGTTAGTTA+CGG + chr3.2:92009360-92009379 None:intergenic 25.0%
! CTAATGCTTCATTTCATTAA+GGG - chr3.2:92009395-92009414 MS.gene063165:intron 25.0%
! CTGTATTTACTGAATGATAA+TGG - chr3.2:92012598-92012617 MS.gene063165:intron 25.0%
! GATCTATATGAAAATCAGTT+GGG - chr3.2:92010101-92010120 MS.gene063165:intron 25.0%
! GTCTGATACATAAAACTTAT+AGG - chr3.2:92011923-92011942 MS.gene063165:CDS 25.0%
! GTGGAATAACATAAAACAAA+AGG - chr3.2:92012643-92012662 MS.gene063165:intron 25.0%
! TACTCCTAGTCTATATTAAT+GGG + chr3.2:92011541-92011560 None:intergenic 25.0%
! TAGTTTATAAGCTTTCCTTA+AGG - chr3.2:92012074-92012093 MS.gene063165:intron 25.0%
! TATAGGTTATGTGTGATATA+GGG - chr3.2:92011940-92011959 MS.gene063165:CDS 25.0%
! TTAAAGTAGTAACTTTGACT+TGG + chr3.2:92010882-92010901 None:intergenic 25.0%
! TTATAGGTTATGTGTGATAT+AGG - chr3.2:92011939-92011958 MS.gene063165:CDS 25.0%
!! AATTTTACAGGTTTACTCAT+TGG - chr3.2:92009636-92009655 MS.gene063165:CDS 25.0%
!! CGCATTCATTTAAATTTTAC+AGG - chr3.2:92009624-92009643 MS.gene063165:CDS 25.0%
!! CGTAACTAACTTCAATTTTA+CGG - chr3.2:92009358-92009377 MS.gene063165:intron 25.0%
!! TGATCAAACATGTGTTTTAT+GGG - chr3.2:92009975-92009994 MS.gene063165:intron 25.0%
!! TTCATATTAACTCCTTTTAC+TGG + chr3.2:92011405-92011424 None:intergenic 25.0%
!!! ATTTTATTTCGAAAGGTAGT+TGG - chr3.2:92010733-92010752 MS.gene063165:intron 25.0%
!!! CAAGTTAGTGGTAAATTTTT+TGG - chr3.2:92012275-92012294 MS.gene063165:CDS 25.0%
!!! GATTGAACTTTTAAAGAACT+AGG - chr3.2:92012042-92012061 MS.gene063165:intron 25.0%
!!! GGCATAGTTTTTTTTTAGTA+TGG - chr3.2:92010122-92010141 MS.gene063165:intron 25.0%
!!! GGTTGAGATTTTTCTTATTT+TGG - chr3.2:92011469-92011488 MS.gene063165:intron 25.0%
!!! TATTTTGAAGGTTTATCTTC+TGG - chr3.2:92011448-92011467 MS.gene063165:intron 25.0%
!!! TTCTTATTTTGGAAAAAGAC+AGG - chr3.2:92011480-92011499 MS.gene063165:intron 25.0%
AAATAGAACAAACACTGTCA+AGG + chr3.2:92009825-92009844 None:intergenic 30.0%
AACTCCAAAATGTTTGTATC+TGG - chr3.2:92010206-92010225 MS.gene063165:intron 30.0%
AACTCCCATTAATATAGACT+AGG - chr3.2:92011534-92011553 MS.gene063165:intron 30.0%
AAGTTGGGACACAAATTTAA+AGG - chr3.2:92011885-92011904 MS.gene063165:CDS 30.0%
AATCTTCTGGTCATAATACT+GGG - chr3.2:92012244-92012263 MS.gene063165:CDS 30.0%
ACAGAACACAAATTAATGGT+TGG + chr3.2:92009329-92009348 None:intergenic 30.0%
AGTATATTAAATCTCAGGCT+TGG - chr3.2:92011557-92011576 MS.gene063165:intron 30.0%
ATAGAAACTAAACATGCTGT+TGG + chr3.2:92011103-92011122 None:intergenic 30.0%
ATAGGTTATGTGTGATATAG+GGG - chr3.2:92011941-92011960 MS.gene063165:CDS 30.0%
ATATAAGGGAATTGCTGTAT+TGG - chr3.2:92009514-92009533 MS.gene063165:intron 30.0%
ATGGGAATCTAAATGTTTCA+AGG - chr3.2:92009872-92009891 MS.gene063165:intron 30.0%
ATTGAGTCAATGTTGTTAGT+TGG + chr3.2:92012730-92012749 None:intergenic 30.0%
CAAGAGCAAGTACAAATAAA+TGG + chr3.2:92011692-92011711 None:intergenic 30.0%
CTCATCATGATTAATAGACT+CGG + chr3.2:92011225-92011244 None:intergenic 30.0%
CTGAACAGAACACAAATTAA+TGG + chr3.2:92009333-92009352 None:intergenic 30.0%
CTTATTGCTGGATATACAAA+TGG - chr3.2:92010491-92010510 MS.gene063165:intron 30.0%
GCTAATGCTTCATTTCATTA+AGG - chr3.2:92009394-92009413 MS.gene063165:intron 30.0%
GCTGATTATATACTTGAAGT+TGG + chr3.2:92010406-92010425 None:intergenic 30.0%
TAGTCTATATTAATGGGAGT+TGG + chr3.2:92011535-92011554 None:intergenic 30.0%
TATAAAAGCTCCACATCAAA+AGG + chr3.2:92011316-92011335 None:intergenic 30.0%
TATAAGGGAATTGCTGTATT+GGG - chr3.2:92009515-92009534 MS.gene063165:intron 30.0%
TTACTTCTACATGCGATTTA+GGG - chr3.2:92011143-92011162 MS.gene063165:intron 30.0%
TTGAAGCTAACTTCCAAAAT+TGG + chr3.2:92011974-92011993 None:intergenic 30.0%
TTGCTTCTTCATTTGATTGT+AGG - chr3.2:92011771-92011790 MS.gene063165:CDS 30.0%
TTTACTTCTACATGCGATTT+AGG - chr3.2:92011142-92011161 MS.gene063165:intron 30.0%
TTTCCTGATGGAAATAGATT+TGG - chr3.2:92010329-92010348 MS.gene063165:CDS 30.0%
! ACACTTTTGGCAAAGATAAT+TGG - chr3.2:92010648-92010667 MS.gene063165:intron 30.0%
! AGAACCAGATACAAACATTT+TGG + chr3.2:92010213-92010232 None:intergenic 30.0%
! CTAGGAGTATATTAAATCTC+AGG - chr3.2:92011552-92011571 MS.gene063165:intron 30.0%
! CTATGTTTGGGATACTTTAT+TGG - chr3.2:92010520-92010539 MS.gene063165:intron 30.0%
! GTGATCAAACATGTGTTTTA+TGG - chr3.2:92009974-92009993 MS.gene063165:intron 30.0%
! TACTATGTTTGCAACACTTT+TGG - chr3.2:92010635-92010654 MS.gene063165:intron 30.0%
! TAGAAATGTCGAAAGCATAA+TGG + chr3.2:92011182-92011201 None:intergenic 30.0%
! TATCACAATACCTTTTGATG+TGG - chr3.2:92011303-92011322 MS.gene063165:intron 30.0%
! TTTGTTATAAAAGAGAGGGA+AGG + chr3.2:92012759-92012778 None:intergenic 30.0%
!! AATGATAATGGTGAGCTAAA+AGG - chr3.2:92012610-92012629 MS.gene063165:intron 30.0%
!! ATCCTAAAGGAAGTATGTTT+TGG + chr3.2:92012202-92012221 None:intergenic 30.0%
!! TACTTCCTTTAGGATTGTTA+AGG - chr3.2:92012207-92012226 MS.gene063165:CDS 30.0%
!! TGTTGACTTTGGTCAAAAAT+TGG - chr3.2:92013207-92013226 MS.gene063165:CDS 30.0%
!! TTGGGAGATTTTATTTCGAA+AGG - chr3.2:92010726-92010745 MS.gene063165:intron 30.0%
!!! AGATACAAACATTTTGGAGT+TGG + chr3.2:92010207-92010226 None:intergenic 30.0%
AAATGGCGATTGCTATGTTT+GGG - chr3.2:92010508-92010527 MS.gene063165:intron 35.0%
AAGGTCCTTAACAATCCTAA+AGG + chr3.2:92012215-92012234 None:intergenic 35.0%
AATAAGAAGTCTTCCGGATA+TGG + chr3.2:92010477-92010496 None:intergenic 35.0%
AATGTTTCAAGGATGCTTAG+TGG - chr3.2:92009883-92009902 MS.gene063165:intron 35.0%
ACTCTCAGCATTTCCATTAA+TGG - chr3.2:92010179-92010198 MS.gene063165:intron 35.0%
AGATTGTTTGACATTAGGAC+TGG - chr3.2:92010377-92010396 MS.gene063165:CDS 35.0%
AGTTCTACAGCAAAGGATAT+CGG + chr3.2:92009191-92009210 None:intergenic 35.0%
AGTTTCGTCAATTGTGTTGA+GGG + chr3.2:92012458-92012477 None:intergenic 35.0%
ATACTTTGACTCCTTTGTCA+GGG - chr3.2:92013131-92013150 MS.gene063165:intron 35.0%
ATCATGATTAATAGACTCGG+AGG + chr3.2:92011222-92011241 None:intergenic 35.0%
ATCTCTTCAAAACTCTCATG+AGG - chr3.2:92011810-92011829 MS.gene063165:CDS 35.0%
ATCTTAATTCACCCACTGAT+AGG - chr3.2:92009848-92009867 MS.gene063165:intron 35.0%
ATTGTTAGTGCATCTCAAGA+TGG - chr3.2:92009682-92009701 MS.gene063165:intron 35.0%
CAATCCTACAATCATTCTAG+TGG + chr3.2:92012027-92012046 None:intergenic 35.0%
CATGTTAGACAAACCCATAT+AGG + chr3.2:92010772-92010791 None:intergenic 35.0%
CCAGAAGATTCATTTATGCA+AGG + chr3.2:92012234-92012253 None:intergenic 35.0%
CCTTGCATAAATGAATCTTC+TGG - chr3.2:92012231-92012250 MS.gene063165:CDS 35.0%
CTCCAAAACATACTTCCTTT+AGG - chr3.2:92012197-92012216 MS.gene063165:CDS 35.0%
CTTCTTCATTTGATTGTAGG+TGG - chr3.2:92011774-92011793 MS.gene063165:CDS 35.0%
CTTGCAGATTGTTTGACATT+AGG - chr3.2:92010372-92010391 MS.gene063165:CDS 35.0%
GAAGACACTCACTTAATTAC+TGG - chr3.2:92009946-92009965 MS.gene063165:intron 35.0%
GAATCTTCTGGTCATAATAC+TGG - chr3.2:92012243-92012262 MS.gene063165:CDS 35.0%
GCTTTCGACATTTCTATATG+TGG - chr3.2:92011186-92011205 MS.gene063165:intron 35.0%
GTTCCAAATCTATTTCCATC+AGG + chr3.2:92010335-92010354 None:intergenic 35.0%
TACAGGTTTACTCATTGGAT+TGG - chr3.2:92009641-92009660 MS.gene063165:CDS 35.0%
TACTTCTACATGCGATTTAG+GGG - chr3.2:92011144-92011163 MS.gene063165:intron 35.0%
TACTTGCATCTTGCAGATAT+GGG - chr3.2:92013057-92013076 MS.gene063165:intron 35.0%
TACTTGCTCTTGTACTTATG+TGG - chr3.2:92011700-92011719 MS.gene063165:CDS 35.0%
TAGGTTATGTGTGATATAGG+GGG - chr3.2:92011942-92011961 MS.gene063165:CDS 35.0%
TATAAAGCTTCCTTGTGCAT+GGG - chr3.2:92009750-92009769 MS.gene063165:intron 35.0%
TATCTGTATCAAGAAGAGAG+AGG + chr3.2:92009036-92009055 None:intergenic 35.0%
TCATTTCTCTTTGTAGTTGC+TGG - chr3.2:92009121-92009140 MS.gene063165:intron 35.0%
TCTCTTCAAAACTCTCATGA+GGG - chr3.2:92011811-92011830 MS.gene063165:CDS 35.0%
TCTGTCAAATTCTTTCCTGA+TGG - chr3.2:92010317-92010336 MS.gene063165:CDS 35.0%
TCTTAATTCACCCACTGATA+GGG - chr3.2:92009849-92009868 MS.gene063165:intron 35.0%
TGAGCTAAAAGGTTCTACTA+TGG - chr3.2:92012621-92012640 MS.gene063165:intron 35.0%
TGCTTTAGTGTGTCCTATAT+GGG - chr3.2:92010756-92010775 MS.gene063165:intron 35.0%
TTAATCATGATGAGCTCACT+AGG - chr3.2:92011231-92011250 MS.gene063165:intron 35.0%
TTACTGACAATAGTTGCACT+AGG + chr3.2:92011731-92011750 None:intergenic 35.0%
TTACTTGCATCTTGCAGATA+TGG - chr3.2:92013056-92013075 MS.gene063165:intron 35.0%
TTCGACATTTCTATATGTGG+TGG - chr3.2:92011189-92011208 MS.gene063165:intron 35.0%
TTTAACCTGAAATGACAGCA+GGG - chr3.2:92010679-92010698 MS.gene063165:intron 35.0%
TTTGAAGAGATCCTAGATTC+AGG + chr3.2:92011801-92011820 None:intergenic 35.0%
TTTGGAAAAAGACAGGAGAA+GGG - chr3.2:92011487-92011506 MS.gene063165:intron 35.0%
! CTAGAAGATTCTAGAAGAGA+GGG + chr3.2:92012823-92012842 None:intergenic 35.0%
! GATGGAAATAGATTTGGAAC+TGG - chr3.2:92010335-92010354 MS.gene063165:CDS 35.0%
! GCTTTATAGCATGAGTTTTC+TGG + chr3.2:92009738-92009757 None:intergenic 35.0%
! GTTTTATGGGATATTACCAC+TGG - chr3.2:92009988-92010007 MS.gene063165:intron 35.0%
! TTGGAAGTTAGCTTCAATGT+TGG - chr3.2:92011977-92011996 MS.gene063165:CDS 35.0%
! TTGGGATACTTTATTGGCTA+AGG - chr3.2:92010526-92010545 MS.gene063165:intron 35.0%
! TTTGGAGTTGGATCCATTAA+TGG + chr3.2:92010195-92010214 None:intergenic 35.0%
! TTTTACTGGCCCATAAAACA+AGG + chr3.2:92011391-92011410 None:intergenic 35.0%
!! ACTCACTTAATTACTGGTTC+TGG - chr3.2:92009952-92009971 MS.gene063165:intron 35.0%
!! TTCTAGAATCTTCTAGCATG+TGG - chr3.2:92012827-92012846 MS.gene063165:intron 35.0%
!! TTGTTTTATGGGCCAGTAAA+AGG - chr3.2:92011390-92011409 MS.gene063165:intron 35.0%
!! TTTTGGAAAAAGACAGGAGA+AGG - chr3.2:92011486-92011505 MS.gene063165:intron 35.0%
!!! TGCCTAAGACCTTGTTTTAT+GGG - chr3.2:92011379-92011398 MS.gene063165:intron 35.0%
!!! TTGCCTAAGACCTTGTTTTA+TGG - chr3.2:92011378-92011397 MS.gene063165:intron 35.0%
AAGTATGAGTCTTTACCCCA+TGG + chr3.2:92013117-92013136 None:intergenic 40.0%
AGAATGTGTCCAATCGTTTG+AGG + chr3.2:92012483-92012502 None:intergenic 40.0%
ATCTTGCAGATATGGGCATT+TGG - chr3.2:92013064-92013083 MS.gene063165:intron 40.0%
ATGAACCACAATACCCTACA+AGG + chr3.2:92013162-92013181 None:intergenic 40.0%
ATGCAACAGATTGACCAGTT+GGG + chr3.2:92009795-92009814 None:intergenic 40.0%
ATTAAGTGAGTGTCTTCACC+TGG + chr3.2:92009943-92009962 None:intergenic 40.0%
CAAATGGCGATTGCTATGTT+TGG - chr3.2:92010507-92010526 MS.gene063165:intron 40.0%
CATACTTTGACTCCTTTGTC+AGG - chr3.2:92013130-92013149 MS.gene063165:intron 40.0%
CCTAGAATTGTCTCACTGAT+AGG - chr3.2:92012356-92012375 MS.gene063165:CDS 40.0%
CCTATCAGTGAGACAATTCT+AGG + chr3.2:92012359-92012378 None:intergenic 40.0%
CTATAAAGCTTCCTTGTGCA+TGG - chr3.2:92009749-92009768 MS.gene063165:intron 40.0%
CTCCAAAAACAGATGTTCTC+AGG + chr3.2:92010014-92010033 None:intergenic 40.0%
GACATACTGCAGATGTACTT+AGG - chr3.2:92010049-92010068 MS.gene063165:intron 40.0%
GAGCACGATGTGTTAAATTG+AGG + chr3.2:92009254-92009273 None:intergenic 40.0%
GAGTTTCGTCAATTGTGTTG+AGG + chr3.2:92012459-92012478 None:intergenic 40.0%
GATGCATTGGAAGCAAGATT+GGG + chr3.2:92012515-92012534 None:intergenic 40.0%
GCTAAAAGGTTCTACTATGG+TGG - chr3.2:92012624-92012643 MS.gene063165:intron 40.0%
GTCAATGTTGTTAGTTGGAG+AGG + chr3.2:92012725-92012744 None:intergenic 40.0%
GTGCTTTAGTGTGTCCTATA+TGG - chr3.2:92010755-92010774 MS.gene063165:intron 40.0%
GTTTAACCTGAAATGACAGC+AGG - chr3.2:92010678-92010697 MS.gene063165:intron 40.0%
TACGCCACTAGAATGATTGT+AGG - chr3.2:92012020-92012039 MS.gene063165:intron 40.0%
TAGTAAGTGATAAGACACCG+AGG + chr3.2:92012857-92012876 None:intergenic 40.0%
TCATCCTCGGATGTATTCAA+TGG - chr3.2:92012542-92012561 MS.gene063165:intron 40.0%
TCATCTTGTCAGTATGTTCC+AGG - chr3.2:92009922-92009941 MS.gene063165:intron 40.0%
TCCAGCAATAAGAAGTCTTC+CGG + chr3.2:92010483-92010502 None:intergenic 40.0%
TCCATTGCATTCTCCATATC+CGG - chr3.2:92010461-92010480 MS.gene063165:intron 40.0%
TGCTTTGTGTACAGGAAGTT+GGG - chr3.2:92011870-92011889 MS.gene063165:CDS 40.0%
TTTGGAGGTGAATTTCAGTC+TGG - chr3.2:92010027-92010046 MS.gene063165:intron 40.0%
! AAGGCACATTCTAGAAGAGA+GGG - chr3.2:92012389-92012408 MS.gene063165:CDS 40.0%
! AGGATGCTTAGTGGACATAA+AGG - chr3.2:92009892-92009911 MS.gene063165:intron 40.0%
! GCTAGAAGATTCTAGAAGAG+AGG + chr3.2:92012824-92012843 None:intergenic 40.0%
!! AACATCAGAAGCATCACTAC+TGG + chr3.2:92013191-92013210 None:intergenic 40.0%
!! ACGTTCTCTGAGATTGTTGA+CGG + chr3.2:92008999-92009018 None:intergenic 40.0%
!! ATTCTAGGACAAAACAGCTG+AGG + chr3.2:92012344-92012363 None:intergenic 40.0%
!! GATGCTTCTGATGTTGACTT+TGG - chr3.2:92013196-92013215 MS.gene063165:CDS 40.0%
!! TAGTTAGGAGTATTGTGCTC+TGG + chr3.2:92012694-92012713 None:intergenic 40.0%
!!! CTGAGAACATCTGTTTTTGG+AGG - chr3.2:92010012-92010031 MS.gene063165:intron 40.0%
AAACCTTTCCGGTATGACCT+TGG + chr3.2:92009216-92009235 None:intergenic 45.0%
AAGGGAGGCTGAAAAAGAGT+GGG - chr3.2:92011505-92011524 MS.gene063165:intron 45.0%
AAGGTGATTTGAGCCATCCA+TGG - chr3.2:92013097-92013116 MS.gene063165:intron 45.0%
AATTCACCCACTGATAGGGA+TGG - chr3.2:92009853-92009872 MS.gene063165:intron 45.0%
ACACAGCAGTGACAACGAAA+TGG - chr3.2:92010427-92010446 MS.gene063165:intron 45.0%
ACTGATAGGACATCTAGGCA+AGG - chr3.2:92012370-92012389 MS.gene063165:CDS 45.0%
ACTGGTCAATCTGTTGCATG+CGG - chr3.2:92009796-92009815 MS.gene063165:intron 45.0%
AGAACGTCACATAGCTGCAA+CGG - chr3.2:92008970-92008989 MS.gene063165:CDS 45.0%
AGAACTCTCCAAGGTCATAC+CGG - chr3.2:92009205-92009224 MS.gene063165:intron 45.0%
AGATTCCCATCCCTATCAGT+GGG + chr3.2:92009862-92009881 None:intergenic 45.0%
AGGTGATTTGAGCCATCCAT+GGG - chr3.2:92013098-92013117 MS.gene063165:intron 45.0%
ATCAGCAGACAAACCCAAAC+AGG + chr3.2:92011845-92011864 None:intergenic 45.0%
ATCATGTTCTGCCCTGAAGT+TGG - chr3.2:92012306-92012325 MS.gene063165:CDS 45.0%
ATCGGTGGGACCAAAAGTAA+CGG + chr3.2:92009173-92009192 None:intergenic 45.0%
ATCTTGCTTCCAATGCATCC+AGG - chr3.2:92012516-92012535 MS.gene063165:CDS 45.0%
ATGAGTCTTTACCCCATGGA+TGG + chr3.2:92013113-92013132 None:intergenic 45.0%
ATTCACCCACTGATAGGGAT+GGG - chr3.2:92009854-92009873 MS.gene063165:intron 45.0%
CATGCAACAGATTGACCAGT+TGG + chr3.2:92009796-92009815 None:intergenic 45.0%
CATGCCATTGAATACATCCG+AGG + chr3.2:92012549-92012568 None:intergenic 45.0%
CATGTCATAACCCATGCACA+AGG + chr3.2:92009763-92009782 None:intergenic 45.0%
CTACAGCAAAGGATATCGGT+GGG + chr3.2:92009187-92009206 None:intergenic 45.0%
CTTGGAGAGTTCTACAGCAA+AGG + chr3.2:92009198-92009217 None:intergenic 45.0%
GAGCAGTACGGACATTTCAT+GGG - chr3.2:92010276-92010295 MS.gene063165:intron 45.0%
GCTGGTTATGCAAAGTCTCA+AGG - chr3.2:92009139-92009158 MS.gene063165:intron 45.0%
GGAGAGGTTTCTCTCTAGTT+AGG + chr3.2:92012709-92012728 None:intergenic 45.0%
GGATATGGAGAATGCAATGG+AGG + chr3.2:92010462-92010481 None:intergenic 45.0%
GGATGCATTGGAAGCAAGAT+TGG + chr3.2:92012516-92012535 None:intergenic 45.0%
GGCCCATAAAACAAGGTCTT+AGG + chr3.2:92011384-92011403 None:intergenic 45.0%
GTCTCACTGATAGGACATCT+AGG - chr3.2:92012365-92012384 MS.gene063165:CDS 45.0%
GTGCTTTGTGTACAGGAAGT+TGG - chr3.2:92011869-92011888 MS.gene063165:CDS 45.0%
GTTATGTGTGATATAGGGGG+TGG - chr3.2:92011945-92011964 MS.gene063165:CDS 45.0%
TAGATTCCCATCCCTATCAG+TGG + chr3.2:92009863-92009882 None:intergenic 45.0%
TAGTAATCCCCAGTTCACTG+TGG + chr3.2:92010620-92010639 None:intergenic 45.0%
TCCGGAAGACTTCTTATTGC+TGG - chr3.2:92010479-92010498 MS.gene063165:intron 45.0%
TCCGGATATGGAGAATGCAA+TGG + chr3.2:92010465-92010484 None:intergenic 45.0%
TCTACAGCAAAGGATATCGG+TGG + chr3.2:92009188-92009207 None:intergenic 45.0%
TGCAACAGATTGACCAGTTG+GGG + chr3.2:92009794-92009813 None:intergenic 45.0%
TGCAGATATGGGCATTTGGA+GGG - chr3.2:92013068-92013087 MS.gene063165:intron 45.0%
TTCAAAACTCTCATGAGGGC+AGG - chr3.2:92011815-92011834 MS.gene063165:CDS 45.0%
TTGCAGATATGGGCATTTGG+AGG - chr3.2:92013067-92013086 MS.gene063165:intron 45.0%
TTGTAGGTGGTCCTGAATCT+AGG - chr3.2:92011787-92011806 MS.gene063165:CDS 45.0%
! AAACACCCTGCTGTCATTTC+AGG + chr3.2:92010687-92010706 None:intergenic 45.0%
! CAAGGCACATTCTAGAAGAG+AGG - chr3.2:92012388-92012407 MS.gene063165:CDS 45.0%
! CTTTGCTGTAGAACTCTCCA+AGG - chr3.2:92009196-92009215 MS.gene063165:intron 45.0%
! GGCCTGAGAACATCTGTTTT+TGG - chr3.2:92010009-92010028 MS.gene063165:intron 45.0%
! TAAGAGTACGCACGCAATTG+CGG - chr3.2:92009427-92009446 MS.gene063165:intron 45.0%
! TAGGGGGTGGTTACCAATTT+TGG - chr3.2:92011958-92011977 MS.gene063165:CDS 45.0%
! TGGGACTTGTTCCAAGTTAG+TGG - chr3.2:92012263-92012282 MS.gene063165:CDS 45.0%
! TGTTTGGGTTTGTCTGCTGA+TGG - chr3.2:92011844-92011863 MS.gene063165:CDS 45.0%
! TTTGGAACTGGCTCAGAAGA+TGG - chr3.2:92010347-92010366 MS.gene063165:CDS 45.0%
!! GATGGAAGTGCTTTGTGTAC+AGG - chr3.2:92011862-92011881 MS.gene063165:CDS 45.0%
!! GGTAGAACTCCCGTTACTTT+TGG - chr3.2:92009160-92009179 MS.gene063165:intron 45.0%
!! TAGGAGTATTGTGCTCTGGT+AGG + chr3.2:92012690-92012709 None:intergenic 45.0%
AACAGATGTTCTCAGGCCAG+TGG + chr3.2:92010007-92010026 None:intergenic 50.0%
ACATGTGCTTTCTCCCCAAC+TGG - chr3.2:92009778-92009797 MS.gene063165:intron 50.0%
ACGGACATTTCATGGGCATG+AGG - chr3.2:92010283-92010302 MS.gene063165:intron 50.0%
AGCCTCATACCACAGTGAAC+TGG - chr3.2:92010608-92010627 MS.gene063165:intron 50.0%
CCACAATACCCTACAAGGAG+TGG + chr3.2:92013157-92013176 None:intergenic 50.0%
CCTCATACCACAGTGAACTG+GGG - chr3.2:92010610-92010629 MS.gene063165:intron 50.0%
CGAAACTCGCCTCAAACGAT+TGG - chr3.2:92012471-92012490 MS.gene063165:CDS 50.0%
CGAGCAGTACGGACATTTCA+TGG - chr3.2:92010275-92010294 MS.gene063165:intron 50.0%
CGGACATTTCATGGGCATGA+GGG - chr3.2:92010284-92010303 MS.gene063165:intron 50.0%
GAAGGGAGGCTGAAAAAGAG+TGG - chr3.2:92011504-92011523 MS.gene063165:intron 50.0%
GATGGCATGCGAGCTTATAG+AGG - chr3.2:92012153-92012172 MS.gene063165:CDS 50.0%
GCCTCATACCACAGTGAACT+GGG - chr3.2:92010609-92010628 MS.gene063165:intron 50.0%
GGAAAAAGACAGGAGAAGGG+AGG - chr3.2:92011490-92011509 MS.gene063165:intron 50.0%
GGTGATTTGAGCCATCCATG+GGG - chr3.2:92013099-92013118 MS.gene063165:intron 50.0%
TCCACATACATCAGCGTTCC+TGG + chr3.2:92012954-92012973 None:intergenic 50.0%
TCCAGGAACGCTGATGTATG+TGG - chr3.2:92012950-92012969 MS.gene063165:intron 50.0%
TCGGTGGGACCAAAAGTAAC+GGG + chr3.2:92009172-92009191 None:intergenic 50.0%
TCTCCAAGGTCATACCGGAA+AGG - chr3.2:92009210-92009229 MS.gene063165:intron 50.0%
TGCGATTTAGGGGTGAGTTC+TGG - chr3.2:92011154-92011173 MS.gene063165:intron 50.0%
! TATGGGCATTTGGAGGGCAT+AGG - chr3.2:92013074-92013093 MS.gene063165:intron 50.0%
! TTCTAGCATGTGGCTTGCCT+CGG - chr3.2:92012837-92012856 MS.gene063165:intron 50.0%
!! CCACTCCTTGTAGGGTATTG+TGG - chr3.2:92013154-92013173 MS.gene063165:CDS 50.0%
!! TGGTAGGAGTGTTCTCACTC+TGG + chr3.2:92012674-92012693 None:intergenic 50.0%
ACAAGGAGTGGCCCTGACAA+AGG + chr3.2:92013145-92013164 None:intergenic 55.0%
CACACGAGTGTCCCACAATC+TGG + chr3.2:92010249-92010268 None:intergenic 55.0%
CAGATTGTGGGACACTCGTG+TGG - chr3.2:92010247-92010266 MS.gene063165:intron 55.0%
CCCCAGTTCACTGTGGTATG+AGG + chr3.2:92010613-92010632 None:intergenic 55.0%
CGATGCGACTGCCAGATTGT+GGG - chr3.2:92010235-92010254 MS.gene063165:intron 55.0%
GAGGGCAGGATCACCTGTTT+GGG - chr3.2:92011829-92011848 MS.gene063165:CDS 55.0%
GGATGAACGCCTGGATGCAT+TGG + chr3.2:92012528-92012547 None:intergenic 55.0%
GGTCAATCTGTTGCATGCGG+TGG - chr3.2:92009799-92009818 MS.gene063165:intron 55.0%
GTGTGGCAAGTCGAGCAGTA+CGG - chr3.2:92010264-92010283 MS.gene063165:intron 55.0%
TAACACATCGTGCTCGCTCG+TGG - chr3.2:92009259-92009278 MS.gene063165:intron 55.0%
TACATCCGAGGATGAACGCC+TGG + chr3.2:92012537-92012556 None:intergenic 55.0%
TGAGGGCAGGATCACCTGTT+TGG - chr3.2:92011828-92011847 MS.gene063165:CDS 55.0%
TGCATCCAGGCGTTCATCCT+CGG - chr3.2:92012529-92012548 MS.gene063165:CDS 55.0%
TGTCAGGGCCACTCCTTGTA+GGG - chr3.2:92013146-92013165 MS.gene063165:intron 55.0%
TTGTCAGGGCCACTCCTTGT+AGG - chr3.2:92013145-92013164 MS.gene063165:intron 55.0%
! GGCATTTGGAGGGCATAGGA+AGG - chr3.2:92013078-92013097 MS.gene063165:intron 55.0%
GCGATGCGACTGCCAGATTG+TGG - chr3.2:92010234-92010253 MS.gene063165:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 92008950 92013252 92008950 ID=MS.gene063165
chr3.2 mRNA 92008950 92013252 92008950 ID=MS.gene063165.t1;Parent=MS.gene063165
chr3.2 exon 92013147 92013252 92013147 ID=MS.gene063165.t1.exon1;Parent=MS.gene063165.t1
chr3.2 CDS 92013147 92013252 92013147 ID=cds.MS.gene063165.t1;Parent=MS.gene063165.t1
chr3.2 exon 92012971 92013065 92012971 ID=MS.gene063165.t1.exon2;Parent=MS.gene063165.t1
chr3.2 CDS 92012971 92013065 92012971 ID=cds.MS.gene063165.t1;Parent=MS.gene063165.t1
chr3.2 exon 92012132 92012556 92012132 ID=MS.gene063165.t1.exon3;Parent=MS.gene063165.t1
chr3.2 CDS 92012132 92012556 92012132 ID=cds.MS.gene063165.t1;Parent=MS.gene063165.t1
chr3.2 exon 92011655 92012015 92011655 ID=MS.gene063165.t1.exon4;Parent=MS.gene063165.t1
chr3.2 CDS 92011655 92012015 92011655 ID=cds.MS.gene063165.t1;Parent=MS.gene063165.t1
chr3.2 exon 92010296 92010409 92010296 ID=MS.gene063165.t1.exon5;Parent=MS.gene063165.t1
chr3.2 CDS 92010296 92010409 92010296 ID=cds.MS.gene063165.t1;Parent=MS.gene063165.t1
chr3.2 exon 92009583 92009664 92009583 ID=MS.gene063165.t1.exon6;Parent=MS.gene063165.t1
chr3.2 CDS 92009583 92009664 92009583 ID=cds.MS.gene063165.t1;Parent=MS.gene063165.t1
chr3.2 exon 92008950 92009035 92008950 ID=MS.gene063165.t1.exon7;Parent=MS.gene063165.t1
chr3.2 CDS 92008950 92009035 92008950 ID=cds.MS.gene063165.t1;Parent=MS.gene063165.t1
Gene Sequence

>MS.gene063165

ATGTCAGTTACGGAGCTGAAAGAACGTCACATAGCTGCAACGGAAACCGTCAACAATCTCAGAGAACGTTTGAAGCAAAGACGCCTCTCTCTTCTTGATACAGATAGTAAGTTTCATTTCATAGTTCATTCATTAGATCTATCTATTTATTTTCTAACTCAACAAACAATTTCATTTCTCTTTGTAGTTGCTGGTTATGCAAAGTCTCAAGGTAGAACTCCCGTTACTTTTGGTCCCACCGATATCCTTTGCTGTAGAACTCTCCAAGGTCATACCGGAAAGGTTTATTCTATTCTTTTTTCCTCAATTTAACACATCGTGCTCGCTCGTGGTAGCTACAATTATTATTATTATTCTAATTTCTTCTTAATCGGTACCAACCATTAATTTGTGTTCTGTTCAGTTGACCGTAACTAACTTCAATTTTACGGTACTCAACTCAACGCTAATGCTTCATTTCATTAAGGGAACATAATGTAAGAGTACGCACGCAATTGCGGTTTGTTTAGTTGTTGTTATTATTATTATTAAGCTAAAATCGGTACTTAGATCTTTGTTGCTATAATATAAGGGAATTGCTGTATTGGGTTTCGAGTTAGATTCATTTACTTCTATCATCACTTATAGCAATTTTTTTGTTAGTTGTGAGTGAGATATGCACGTGCAATGAATAACGCATTCATTTAAATTTTACAGGTTTACTCATTGGATTGGACTTCAGAAAAGAATCGAATTGTTAGTGCATCTCAAGATGGAAGATTAATAGTATGGAATGCTCTAACAAGCCAGAAAACTCATGCTATAAAGCTTCCTTGTGCATGGGTTATGACATGTGCTTTCTCCCCAACTGGTCAATCTGTTGCATGCGGTGGCCTTGACAGTGTTTGTTCTATTTTCAATCTTAATTCACCCACTGATAGGGATGGGAATCTAAATGTTTCAAGGATGCTTAGTGGACATAAAGGTTATGTTTCATCTTGTCAGTATGTTCCAGGTGAAGACACTCACTTAATTACTGGTTCTGGTGATCAAACATGTGTTTTATGGGATATTACCACTGGCCTGAGAACATCTGTTTTTGGAGGTGAATTTCAGTCTGGACATACTGCAGATGTACTTAGGTATTGTTTAAGTTGTTTTAATAGTAGCGAGATCTATATGAAAATCAGTTGGGCATAGTTTTTTTTTAGTATGGAATCATCGCTAAGAAATATTTCTTTTCTTTGCTCACTCTCAGCATTTCCATTAATGGATCCAACTCCAAAATGTTTGTATCTGGTTCTTGCGATGCGACTGCCAGATTGTGGGACACTCGTGTGGCAAGTCGAGCAGTACGGACATTTCATGGGCATGAGGGTGATGTTAATTCTGTCAAATTCTTTCCTGATGGAAATAGATTTGGAACTGGCTCAGAAGATGGAACTTGCAGATTGTTTGACATTAGGACTGGACACCAACTTCAAGTATATAATCAGCAACACAGCAGTGACAACGAAATGGCACATGTGACCTCCATTGCATTCTCCATATCCGGAAGACTTCTTATTGCTGGATATACAAATGGCGATTGCTATGTTTGGGATACTTTATTGGCTAAGGTAATTGTTGCTTTAGTGTGATTATGTAAAACAAAAGTAGGGCGTTTTCTTTCTACTCATAGCCTCATACCACAGTGAACTGGGGATTACTATGTTTGCAACACTTTTGGCAAAGATAATTGGTTTTTCAGTTTAACCTGAAATGACAGCAGGGTGTTTTATTTCTACTTATTATATTTTGGGAGATTTTATTTCGAAAGGTAGTTGGTGCTTTAGTGTGTCCTATATGGGTTTGTCTAACATGTTAAAACAACTAAAAGCAGTAATTTTTTTATTGAAAACAACAATTATTTATTAAAAAGCGACACATTTAATATAAAATGCACAAGTTCCAAGTCAAAGTTACTACTTTAAATTTCTTAACATGACCCATATAGAAAATAAGATTCTTTGTGACGCTTAATAATTTTTTATTGAAAACAACTAAATTTCTTAACAATTATTTATTAAAAAGCGACACATTTAATATAAAATGCACAAGTTCCAAGTCAAAGTTACTACTTTAAATTTCTTAACATGACCCATATAGAAAATAAGATTCTGTGACACATACCAACAGCATGTTTAGTTTCTATTAATTAACTAATTGTTTGCTTTACTTCTACATGCGATTTAGGGGTGAGTTCTGGTTCCATTATGCTTTCGACATTTCTATATGTGGTGGAATTGTGCCTCCGAGTCTATTAATCATGATGAGCTCACTAGGCATTATCTTGTATATAAATTGGCTCGTAACTTTCTGATATTCTTTTTGCTATCACAATACCTTTTGATGTGGAGCTTTTATACCGCTGTTTATTTTATTTTGTACTTCTATTTGTCTCAAGTCATTGCCTAAGACCTTGTTTTATGGGCCAGTAAAAGGAGTTAATATGAATTATTTGAAGGAAATTTTTTTCTTATTTTGAAGGTTTATCTTCTGGTTGAGATTTTTCTTATTTTGGAAAAAGACAGGAGAAGGGAGGCTGAAAAAGAGTGGGTGTTCCAACTCCCATTAATATAGACTAGGAGTATATTAAATCTCAGGCTTGGCAAACTTGCCATATTTTTTGAAAAAAGAAAAACTGAACAAAAACAAAATGCAATTCTGTCTTGTAACATCTAATCATAGCATGATATTTTCTGACGCTGCTTTCTCTTTCCATTTATTTGTACTTGCTCTTGTACTTATGTGGTTGTGCCTAGTGCAACTATTGTCAGTAAGACTGACTAACTGACTATACTTGCTTCTTCATTTGATTGTAGGTGGTCCTGAATCTAGGATCTCTTCAAAACTCTCATGAGGGCAGGATCACCTGTTTGGGTTTGTCTGCTGATGGAAGTGCTTTGTGTACAGGAAGTTGGGACACAAATTTAAAGGTGAGCAAACATTTTAGTCTGATACATAAAACTTATAGGTTATGTGTGATATAGGGGGTGGTTACCAATTTTGGAAGTTAGCTTCAATGTTGGTGATATTTTTCATGTTTTTTTACGCCACTAGAATGATTGTAGGATTGAACTTTTAAAGAACTAGGCTTTTGTGTTAGTTTATAAGCTTTCCTTAAGGTTAAACCTTTAAAAAGAATTAGGAATTAAGCAAAAATAAAAAAGCATTATATTTATGATGGCATGCGAGCTTATAGAGGTTTAACATGTTCTGAGTTGAACTCCAAAACATACTTCCTTTAGGATTGTTAAGGACCTTGCATAAATGAATCTTCTGGTCATAATACTGGGACTTGTTCCAAGTTAGTGGTAAATTTTTTGGTTAGAAAAATCATGTTCTGCCCTGAAGTTGGTATCATATTTTTCCTCAGCTGTTTTGTCCTAGAATTGTCTCACTGATAGGACATCTAGGCAAGGCACATTCTAGAAGAGAGGGAATATGAGTTAGAACTCAGTTTCTCTGTGTTTCATCATCACTGCCCTCAACACAATTGACGAAACTCGCCTCAAACGATTGGACACATTCTTCAAATCTTCCCAATCTTGCTTCCAATGCATCCAGGCGTTCATCCTCGGATGTATTCAATGGCATGATAGAACTTGTAAAATCAAGATAACAAAACTGTATTTACTGAATGATAATGGTGAGCTAAAAGGTTCTACTATGGTGGAATAACATAAAACAAAAGGATAAACCAGAGTGAGAACACTCCTACCAGAGCACAATACTCCTAACTAGAGAGAAACCTCTCCAACTAACAACATTGACTCAATCACTAGCCTTCCCTCTCTTTTATAACAAAAATATCTCTAAAATAAAGAACTTTGCTAACTAACTCATATTCCCTCTCTTCTAGAATCTTCTAGCATGTGGCTTGCCTCGGTGTCTTATCACTTACTATACTAACATTTTTTTTTCTTTGATAATATTACTATACTATGGTAACCAATGCATATTTGTATCAAATAATATATCCAGGAACGCTGATGTATGTGGATTTCACTGATTAAATATATGGATGTGGTATTTTCTGAGTGCCGTCTATCTTGAAAAAATGTTTAGGCGTTAGTTTGACATAATTACTTGCATCTTGCAGATATGGGCATTTGGAGGGCATAGGAAGGTGATTTGAGCCATCCATGGGGTAAAGACTCATACTTTGACTCCTTTGTCAGGGCCACTCCTTGTAGGGTATTGTGGTTCATCACAATCCAGTAGTGATGCTTCTGATGTTGACTTTGGTCAAAAATTGGAAGACAAAGTTTATAACCTTTAG

Protein sequence

>MS.gene063165.t1

MSVTELKERHIAATETVNNLRERLKQRRLSLLDTDIAGYAKSQGRTPVTFGPTDILCCRTLQGHTGKVYSLDWTSEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLNVSRMLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSNSKMFVSGSCDATARLWDTRVASRAVRTFHGHEGDVNSVKFFPDGNRFGTGSEDGTCRLFDIRTGHQLQVYNQQHSSDNEMAHVTSIAFSISGRLLIAGYTNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKAFILGCIQWHDRTCKIKITKLYLLNDNGYCGSSQSSSDASDVDFGQKLEDKVYNL