Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017070.t1 | XP_003617387.2 | 99 | 922 | 9 | 0 | 1 | 922 | 1 | 922 | 0.00E+00 | 1744.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017070.t1 | Q8H1U4 | 65.8 | 916 | 304 | 4 | 1 | 913 | 1 | 910 | 0.0e+00 | 1115.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017070.t1 | G7K3C1 | 99.0 | 922 | 9 | 0 | 1 | 922 | 1 | 922 | 0.0e+00 | 1744.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006802 | MS.gene017070 | PPI |
| MS.gene017070 | MS.gene30421 | PPI |
| MS.gene017070 | MS.gene56523 | PPI |
| MS.gene017070 | MS.gene76069 | PPI |
| MS.gene017070 | MS.gene93598 | PPI |
| MS.gene017070 | MS.gene96778 | PPI |
| MS.gene017070 | MS.gene051100 | PPI |
| MS.gene56142 | MS.gene017070 | PPI |
| MS.gene017070 | MS.gene43131 | PPI |
| MS.gene059369 | MS.gene017070 | PPI |
| MS.gene25107 | MS.gene017070 | PPI |
| MS.gene017070 | MS.gene059371 | PPI |
| MS.gene017070 | MS.gene26468 | PPI |
| MS.gene38996 | MS.gene017070 | PPI |
| MS.gene017070 | MS.gene032323 | PPI |
| MS.gene32240 | MS.gene017070 | PPI |
| MS.gene074437 | MS.gene017070 | PPI |
| MS.gene017070 | MS.gene46213 | PPI |
| MS.gene017070 | MS.gene29661 | PPI |
| MS.gene017070 | MS.gene93612 | PPI |
| MS.gene017070 | MS.gene007855 | PPI |
| MS.gene017070 | MS.gene031482 | PPI |
| MS.gene017070 | MS.gene006458 | PPI |
| MS.gene017070 | MS.gene047859 | PPI |
| MS.gene017070 | MS.gene26467 | PPI |
| MS.gene059370 | MS.gene017070 | PPI |
| MS.gene017070 | MS.gene26890 | PPI |
| MS.gene017070 | MS.gene33573 | PPI |
| MS.gene80048 | MS.gene017070 | PPI |
| MS.gene017070 | MS.gene94232 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017070.t1 | MTR_5g091020 | 99.132 | 922 | 8 | 0 | 1 | 922 | 1 | 922 | 0.0 | 1876 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017070.t1 | AT1G06590 | 65.939 | 916 | 303 | 4 | 1 | 913 | 1 | 910 | 0.0 | 1174 |
Find 184 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAGCTGATCAGGTTATTT+TGG | 0.134029 | 5.1:+72502685 | MS.gene017070:CDS |
| CTAATGAGTTCTTCCAATTT+TGG | 0.138756 | 5.1:-72502385 | None:intergenic |
| CAAGTTCATCACACAGTTTC+TGG | 0.154029 | 5.1:-72510740 | None:intergenic |
| TTTGGATGCGAACAGTAATT+TGG | 0.171286 | 5.1:+72502703 | MS.gene017070:CDS |
| CTGAGCTTCATGGAAGATTT+TGG | 0.180753 | 5.1:-72508310 | None:intergenic |
| TGTTGTTGTTTAGGAATAAT+TGG | 0.207157 | 5.1:+72502641 | MS.gene017070:intron |
| CAACATTTAGCAGTCTTTAA+AGG | 0.213041 | 5.1:+72510321 | MS.gene017070:CDS |
| TCAAACTTGCTGTTTGAAAA+TGG | 0.214893 | 5.1:+72506085 | MS.gene017070:CDS |
| GCCAAGTTGCTTCCCAGTTT+TGG | 0.226282 | 5.1:-72502426 | None:intergenic |
| ATATTCACCGTTTACTAGTA+TGG | 0.229148 | 5.1:+72506141 | MS.gene017070:CDS |
| TGAAATTGCTTTATTATGTT+TGG | 0.240051 | 5.1:+72505555 | MS.gene017070:CDS |
| ACTACCTTGGAAACGTTAAC+TGG | 0.242741 | 5.1:-72508340 | None:intergenic |
| GAAATTGCTTTATTATGTTT+GGG | 0.268224 | 5.1:+72505556 | MS.gene017070:CDS |
| GCTTTGGCATCACCTGTTAC+TGG | 0.276397 | 5.1:+72510765 | MS.gene017070:CDS |
| TCTGCGACAGCTACAGAAAT+TGG | 0.287798 | 5.1:+72504158 | MS.gene017070:CDS |
| TTCATTTCAGAAACATATAT+TGG | 0.294740 | 5.1:+72513956 | MS.gene017070:CDS |
| GGATGATGCATTTCCACTTT+GGG | 0.312657 | 5.1:+72505578 | MS.gene017070:CDS |
| GCAGTCATGTGATGATATTT+TGG | 0.317956 | 5.1:+72502360 | MS.gene017070:intron |
| TTGGATGCGAACAGTAATTT+GGG | 0.319904 | 5.1:+72502704 | MS.gene017070:CDS |
| CAGAAAATATTTGAACCATT+TGG | 0.320684 | 5.1:-72508561 | None:intergenic |
| CAAAGGCCCTTGTTATCATT+TGG | 0.320708 | 5.1:+72508286 | MS.gene017070:CDS |
| TGAGATTGATAAGCCAAAAC+TGG | 0.320794 | 5.1:+72502413 | MS.gene017070:CDS |
| ATAATTGGAGGTCCCGATTC+AGG | 0.332819 | 5.1:+72502656 | MS.gene017070:CDS |
| CCTCCATGACCAAGAATTAT+CGG | 0.342968 | 5.1:-72512245 | None:intergenic |
| TTCTGTCAGGATTCTGGATC+TGG | 0.349192 | 5.1:+72508579 | MS.gene017070:CDS |
| GTTGTTGGCTTCCAATCATT+TGG | 0.351718 | 5.1:+72506246 | MS.gene017070:CDS |
| CTTCGCCATTGCCAAATGAT+TGG | 0.353923 | 5.1:-72506257 | None:intergenic |
| TGGGCATCCAAAGCTGGCTT+TGG | 0.360157 | 5.1:+72505597 | MS.gene017070:CDS |
| TCTTAATTTATCACTCTGTT+TGG | 0.362155 | 5.1:-72503872 | None:intergenic |
| ACCTGTTACTGGTGTAGATA+TGG | 0.365708 | 5.1:+72510776 | MS.gene017070:CDS |
| TTTCAATTTGCTACCGTTTG+AGG | 0.370631 | 5.1:+72502754 | MS.gene017070:CDS |
| TTCACCTCCAAAGCCAGCTT+TGG | 0.375269 | 5.1:-72505604 | None:intergenic |
| TTTAAAGCTAAAACGGTTGT+TGG | 0.375594 | 5.1:+72506231 | MS.gene017070:CDS |
| TGCTCTGCAGTTTCATGAAT+TGG | 0.376439 | 5.1:+72513857 | MS.gene017070:intron |
| AATGGCGAAGTTTGATTTAA+CGG | 0.376800 | 5.1:+72506270 | MS.gene017070:CDS |
| TACGAAGAAACTAGTTTAGA+TGG | 0.377685 | 5.1:+72503460 | MS.gene017070:CDS |
| ATGTTGGTTGGGCACAGAAC+TGG | 0.377959 | 5.1:-72508620 | None:intergenic |
| CCGGCTGGTAATAATAGTTC+TGG | 0.380070 | 5.1:+72505526 | MS.gene017070:CDS |
| TTACTTTGGCGGTCTTCATA+TGG | 0.381475 | 5.1:-72503904 | None:intergenic |
| CCACTTTGGGCATCCAAAGC+TGG | 0.381512 | 5.1:+72505591 | MS.gene017070:CDS |
| GCAACAGCTTGGGAGTTATA+TGG | 0.382924 | 5.1:+72508693 | MS.gene017070:CDS |
| GCTGAGCTATGGCTCTCTCT+TGG | 0.386122 | 5.1:+72512176 | MS.gene017070:CDS |
| TGACAAACTTGGGCAATTAG+AGG | 0.387249 | 5.1:+72513914 | MS.gene017070:CDS |
| GGTAGTGCCGTTTCTTTGAA+TGG | 0.388272 | 5.1:+72504123 | MS.gene017070:CDS |
| ACTAAACTCAGAAGTGCATT+AGG | 0.400537 | 5.1:-72503616 | None:intergenic |
| TGATGATTATACTGCTGCTT+TGG | 0.403956 | 5.1:+72504330 | MS.gene017070:CDS |
| TCAAGCACTGCTGGGATACT+AGG | 0.406665 | 5.1:+72506112 | MS.gene017070:CDS |
| GGTAAACTAACCTCGTATAT+CGG | 0.408448 | 5.1:-72502515 | None:intergenic |
| TCCATATCTACACCAGTAAC+AGG | 0.408554 | 5.1:-72510777 | None:intergenic |
| AATGGCATCTCAAGCACTGC+TGG | 0.409205 | 5.1:+72506103 | MS.gene017070:CDS |
| CAGAAAATTTAAAGCTAAAA+CGG | 0.410366 | 5.1:+72506224 | MS.gene017070:CDS |
| GGGATGATGCATTTCCACTT+TGG | 0.412550 | 5.1:+72505577 | MS.gene017070:CDS |
| AATTCTTGGTCATGGAGGTT+TGG | 0.413839 | 5.1:+72512250 | MS.gene017070:CDS |
| AGAAGAAATTGAAGCAAGAA+AGG | 0.415329 | 5.1:+72503558 | MS.gene017070:CDS |
| TTCTGAAGAACTCCAACCTT+TGG | 0.419782 | 5.1:+72512850 | MS.gene017070:CDS |
| AAACTTACTCGATGCAGTTC+AGG | 0.424047 | 5.1:-72504183 | None:intergenic |
| GCCCAACCAACATCAATTCC+TGG | 0.424701 | 5.1:+72508630 | MS.gene017070:CDS |
| AGCTTCGATATCACCTGAAT+CGG | 0.425601 | 5.1:-72502669 | None:intergenic |
| TCCAGGAATTGATGTTGGTT+GGG | 0.434584 | 5.1:-72508631 | None:intergenic |
| TTTGCTTGCTGAGATTCATA+AGG | 0.436669 | 5.1:+72511552 | MS.gene017070:CDS |
| AAGTTCATCACACAGTTTCT+GGG | 0.437398 | 5.1:-72510739 | None:intergenic |
| TGCTAAAGTATATGCAAGAT+TGG | 0.437680 | 5.1:-72506056 | None:intergenic |
| GCACTTCTGAGTTTAGTAGA+TGG | 0.438748 | 5.1:+72503622 | MS.gene017070:CDS |
| ATCCAGGAATTGATGTTGGT+TGG | 0.441435 | 5.1:-72508632 | None:intergenic |
| GCATCCAAAGCTGGCTTTGG+AGG | 0.444711 | 5.1:+72505600 | MS.gene017070:CDS |
| GTGTGATGAACTTGGTGCTT+TGG | 0.447118 | 5.1:+72510749 | MS.gene017070:CDS |
| CTTCATGAGCATGCTTTACA+CGG | 0.452464 | 5.1:+72510608 | MS.gene017070:CDS |
| TGGGCATGTACTGAGCTTCA+TGG | 0.453351 | 5.1:-72508320 | None:intergenic |
| GAAAGGCTTGCTAAAGCATA+TGG | 0.453725 | 5.1:-72512098 | None:intergenic |
| CTCTTACTTTAGCTGAGCTA+TGG | 0.457524 | 5.1:+72512165 | MS.gene017070:CDS |
| GAGGTTTGGAGCTCCGCTCA+CGG | 0.457750 | 5.1:+72512264 | MS.gene017070:CDS |
| TATACTTCGTGCAACAGCTT+GGG | 0.460709 | 5.1:+72508683 | MS.gene017070:CDS |
| TGAAGAACTCCAACCTTTGG+AGG | 0.461943 | 5.1:+72512853 | MS.gene017070:CDS |
| GCCAAAACTGGGAAGCAACT+TGG | 0.464201 | 5.1:+72502425 | MS.gene017070:CDS |
| GTAGTGCCGTTTCTTTGAAT+GGG | 0.464451 | 5.1:+72504124 | MS.gene017070:CDS |
| TTCAAACCCATTCAAAGAAA+CGG | 0.465431 | 5.1:-72504130 | None:intergenic |
| ATTCTGCATATCATTTAACT+TGG | 0.466902 | 5.1:+72512121 | MS.gene017070:CDS |
| TGTCATAGACCATGGCCATC+AGG | 0.469456 | 5.1:-72513896 | None:intergenic |
| TGTTGGTTGGGCACAGAACT+GGG | 0.472742 | 5.1:-72508619 | None:intergenic |
| CCCGTACCATGTTACTTTGG+CGG | 0.476806 | 5.1:-72503915 | None:intergenic |
| GAAATACCCATACTAGTAAA+CGG | 0.476976 | 5.1:-72506148 | None:intergenic |
| TTTATATCTGGCAGGAACTC+AGG | 0.477934 | 5.1:+72508442 | MS.gene017070:intron |
| TCTAAACTAGTTTCTTCGTA+TGG | 0.481801 | 5.1:-72503457 | None:intergenic |
| CTTTGCTGCGAGCAAGGTAC+GGG | 0.483239 | 5.1:-72510829 | None:intergenic |
| GCTTTGCTGCGAGCAAGGTA+CGG | 0.484021 | 5.1:-72510830 | None:intergenic |
| AGGTGATATCGAAGCTGATC+AGG | 0.492525 | 5.1:+72502676 | MS.gene017070:CDS |
| CAATTGTTTGTTCTCTTGAG+AGG | 0.495715 | 5.1:+72506187 | MS.gene017070:CDS |
| CGCACAAACTGGCAGATACA+AGG | 0.495982 | 5.1:+72503967 | MS.gene017070:CDS |
| TTTCCGATAATTCTTGGTCA+TGG | 0.496921 | 5.1:+72512242 | MS.gene017070:CDS |
| CTTGCTTTGCTGATGCATCA+AGG | 0.501716 | 5.1:+72509901 | MS.gene017070:CDS |
| CTCAAGATCTACGCTCCTCC+AGG | 0.503478 | 5.1:+72501829 | MS.gene017070:CDS |
| AGTTCTGCAATGACAATTGA+TGG | 0.505348 | 5.1:+72508501 | MS.gene017070:CDS |
| AGCAGTTCGTGTTTCTCAGC+AGG | 0.505632 | 5.1:+72505782 | MS.gene017070:CDS |
| GACAAAAGTGCAGGGAAAGA+AGG | 0.506651 | 5.1:+72505487 | MS.gene017070:intron |
| TATTCACCGTTTACTAGTAT+GGG | 0.513278 | 5.1:+72506142 | MS.gene017070:CDS |
| AGGAATTTACAAAAGCCAAA+TGG | 0.514925 | 5.1:+72508546 | MS.gene017070:CDS |
| TATCCCGTACCATGTTACTT+TGG | 0.516958 | 5.1:-72503918 | None:intergenic |
| GGCTTCCAATCATTTGGCAA+TGG | 0.517340 | 5.1:+72506252 | MS.gene017070:CDS |
| GCAAGGTACGGGCATGGCGA+AGG | 0.518844 | 5.1:-72510818 | None:intergenic |
| CAGAAACTGTGTGATGAACT+TGG | 0.519173 | 5.1:+72510741 | MS.gene017070:CDS |
| CCTTCAGTACAGCTTGGCTC+AGG | 0.520226 | 5.1:+72508526 | MS.gene017070:CDS |
| GCTACAGATTCGAACGGAAA+AGG | 0.520404 | 5.1:-72501865 | None:intergenic |
| CTATGTGATACAAATTTCAA+TGG | 0.520415 | 5.1:+72512314 | MS.gene017070:CDS |
| GGTTCAGTGCCCGTGTGGCA+TGG | 0.523020 | 5.1:-72512205 | None:intergenic |
| AGGTTTGGAGCTCCGCTCAC+GGG | 0.524912 | 5.1:+72512265 | MS.gene017070:CDS |
| CTACCTTGGAAACGTTAACT+GGG | 0.525003 | 5.1:-72508339 | None:intergenic |
| ATATACTTCGTGCAACAGCT+TGG | 0.526105 | 5.1:+72508682 | MS.gene017070:CDS |
| ATTTGTAACACATGCAAAAG+AGG | 0.526228 | 5.1:-72511495 | None:intergenic |
| ACCGCCAAAGTAACATGGTA+CGG | 0.526359 | 5.1:+72503914 | MS.gene017070:CDS |
| GGAAAACGCCATACCTCAAA+CGG | 0.526617 | 5.1:-72502767 | None:intergenic |
| AGTACTTGCAAAACAGATCC+AGG | 0.526714 | 5.1:-72508648 | None:intergenic |
| ACTTGGGCAATTAGAGGAAA+GGG | 0.529233 | 5.1:+72513920 | MS.gene017070:CDS |
| AATGAGCTTTACATATGCTA+AGG | 0.532611 | 5.1:-72510298 | None:intergenic |
| GCCATGGTCTATGACAAACT+TGG | 0.534302 | 5.1:+72513903 | MS.gene017070:CDS |
| GTAGCTCAACATAATCGTCT+TGG | 0.536260 | 5.1:+72501883 | MS.gene017070:CDS |
| CTGGAGGAGCGTAGATCTTG+AGG | 0.540154 | 5.1:-72501828 | None:intergenic |
| TCCCTATGTTTGTTAAGAGA+CGG | 0.541201 | 5.1:-72503402 | None:intergenic |
| GTCTGCTTACCTCCAAAGGT+TGG | 0.541541 | 5.1:-72512862 | None:intergenic |
| ATGGTGCCTTCAGTACAGCT+TGG | 0.541706 | 5.1:+72508520 | MS.gene017070:CDS |
| TCTGCAGTTTCATGAATTGG+CGG | 0.545463 | 5.1:+72513860 | MS.gene017070:intron |
| GCTTCGATATCACCTGAATC+GGG | 0.550133 | 5.1:-72502668 | None:intergenic |
| AACTTGGGCAATTAGAGGAA+AGG | 0.550820 | 5.1:+72513919 | MS.gene017070:CDS |
| CAGAGTGATAAATTAAGAGT+AGG | 0.551438 | 5.1:+72503877 | MS.gene017070:CDS |
| ACAGATCCAGGAATTGATGT+TGG | 0.553520 | 5.1:-72508636 | None:intergenic |
| CTGCGAGCAAGGTACGGGCA+TGG | 0.554584 | 5.1:-72510824 | None:intergenic |
| TAAATGATATGCAGAATGAA+AGG | 0.559046 | 5.1:-72512115 | None:intergenic |
| TTAGGTGTATGAAGATGAAA+CGG | 0.559249 | 5.1:-72503598 | None:intergenic |
| TGCCGTCTCTTAACAAACAT+AGG | 0.559859 | 5.1:+72503400 | MS.gene017070:CDS |
| GCAGTCTTTAAAGGATACAA+AGG | 0.560313 | 5.1:+72510330 | MS.gene017070:CDS |
| TAAAGTCTGCTTACCTCCAA+AGG | 0.561354 | 5.1:-72512866 | None:intergenic |
| CTTCTCTGCAGCATGTTCAA+AGG | 0.566366 | 5.1:+72508269 | MS.gene017070:intron |
| GAATTGCTTTGCTGCGAGCA+AGG | 0.566474 | 5.1:-72510835 | None:intergenic |
| ATGCAGCGGACGTTTAAAGC+TGG | 0.567106 | 5.1:+72510716 | MS.gene017070:intron |
| GCCGTCTCTTAACAAACATA+GGG | 0.569130 | 5.1:+72503401 | MS.gene017070:CDS |
| CCATGGTCTATGACAAACTT+GGG | 0.572262 | 5.1:+72513904 | MS.gene017070:CDS |
| CGGGCACTGAACCTTGTCCA+TGG | 0.573001 | 5.1:+72512215 | MS.gene017070:CDS |
| GGCTGAAGCATTCTACCTGA+TGG | 0.574890 | 5.1:+72513881 | MS.gene017070:CDS |
| ATGGCATCTCAAGCACTGCT+GGG | 0.575777 | 5.1:+72506104 | MS.gene017070:CDS |
| AAACTAGTTTCTTCGTATGG+AGG | 0.578782 | 5.1:-72503454 | None:intergenic |
| AGAATACGAGAACATGGACT+TGG | 0.579108 | 5.1:+72503510 | MS.gene017070:CDS |
| CCAGAACTATTATTACCAGC+CGG | 0.579141 | 5.1:-72505526 | None:intergenic |
| AGCTAAAGTAAGAGTAGCTG+AGG | 0.583735 | 5.1:-72512156 | None:intergenic |
| CCCAAGTTTGTCATAGACCA+TGG | 0.588238 | 5.1:-72513904 | None:intergenic |
| CCGCCAAAGTAACATGGTAC+GGG | 0.590022 | 5.1:+72503915 | MS.gene017070:CDS |
| CCTGAGCCAAGCTGTACTGA+AGG | 0.590820 | 5.1:-72508526 | None:intergenic |
| ATGAAACGGAACTCTTCCAC+TGG | 0.590952 | 5.1:-72503584 | None:intergenic |
| GAATTATCGGAAAAGCTCCA+TGG | 0.592292 | 5.1:-72512232 | None:intergenic |
| ATGCCCAGTTAACGTTTCCA+AGG | 0.595544 | 5.1:+72508336 | MS.gene017070:CDS |
| CCGATAATTCTTGGTCATGG+AGG | 0.595973 | 5.1:+72512245 | MS.gene017070:CDS |
| ATTCAATATATACTAACAAG+AGG | 0.598080 | 5.1:-72514008 | None:intergenic |
| TGTTGTTTAGGAATAATTGG+AGG | 0.608292 | 5.1:+72502644 | MS.gene017070:intron |
| AAATTGCTTTATTATGTTTG+GGG | 0.609522 | 5.1:+72505557 | MS.gene017070:CDS |
| GAGATTGATAAGCCAAAACT+GGG | 0.611852 | 5.1:+72502414 | MS.gene017070:CDS |
| AGCGCATTTATGCGAGACAT+AGG | 0.613638 | 5.1:-72509867 | None:intergenic |
| TTTGTAACACATGCAAAAGA+GGG | 0.615678 | 5.1:-72511494 | None:intergenic |
| CAGCTTGGGAGTTATATGGC+AGG | 0.615717 | 5.1:+72508697 | MS.gene017070:CDS |
| TGGATGCGAACAGTAATTTG+GGG | 0.621377 | 5.1:+72502705 | MS.gene017070:CDS |
| AAAGGAACGGAAACTTGACC+TGG | 0.622958 | 5.1:-72501847 | None:intergenic |
| TCGGAAAAGCTCCATGGACA+AGG | 0.623063 | 5.1:-72512226 | None:intergenic |
| TTGGATCAAGCCATGCCACA+CGG | 0.623878 | 5.1:+72512195 | MS.gene017070:CDS |
| TGTTGAGCTACAGATTCGAA+CGG | 0.626645 | 5.1:-72501871 | None:intergenic |
| ATACAGAGCGATACTTTGTG+TGG | 0.626980 | 5.1:-72501802 | None:intergenic |
| TTCATGAGCATGCTTTACAC+GGG | 0.629895 | 5.1:+72510609 | MS.gene017070:CDS |
| TGGATCAAGCCATGCCACAC+GGG | 0.632664 | 5.1:+72512196 | MS.gene017070:CDS |
| CCAGCTTTGGATGCCCAAAG+TGG | 0.638618 | 5.1:-72505591 | None:intergenic |
| TGAAGACCGCCAAAGTAACA+TGG | 0.640921 | 5.1:+72503909 | MS.gene017070:CDS |
| AGAAATTGAAGCAAGAAAGG+AGG | 0.641409 | 5.1:+72503561 | MS.gene017070:CDS |
| TGTTTGGATACTGAATCAGC+AGG | 0.647779 | 5.1:-72503856 | None:intergenic |
| GGAGTTATCGTAAATGCACC+TGG | 0.655237 | 5.1:-72501781 | None:intergenic |
| CAACAATATAGGCCCGTGAG+CGG | 0.657328 | 5.1:-72512277 | None:intergenic |
| GTATTCAGAATACGAGAACA+TGG | 0.657580 | 5.1:+72503504 | MS.gene017070:CDS |
| GAAGCAAGAAAGGAGGCCAG+TGG | 0.662714 | 5.1:+72503568 | MS.gene017070:CDS |
| AGCATTCTACCTGATGGCCA+TGG | 0.666689 | 5.1:+72513887 | MS.gene017070:CDS |
| AGATTCGAACGGAAAAGGAA+CGG | 0.668299 | 5.1:-72501860 | None:intergenic |
| CGCAGCAAAGCAATTCCGAG+AGG | 0.671365 | 5.1:+72510842 | MS.gene017070:CDS |
| TTTGGACCAAATGATAACAA+GGG | 0.679717 | 5.1:-72508292 | None:intergenic |
| GTTGGTTGGGCACAGAACTG+GGG | 0.696775 | 5.1:-72508618 | None:intergenic |
| GACAAGGTTCAGTGCCCGTG+TGG | 0.697635 | 5.1:-72512210 | None:intergenic |
| GGAACGGAAACTTGACCTGG+AGG | 0.699710 | 5.1:-72501844 | None:intergenic |
| GCTGTGATGTTGAAACAACC+AGG | 0.711853 | 5.1:+72501763 | MS.gene017070:CDS |
| GAACTATTATTACCAGCCGG+AGG | 0.715079 | 5.1:-72505523 | None:intergenic |
| TTATCAGAAATCTGGCAATG+CGG | 0.719122 | 5.1:+72512064 | MS.gene017070:intron |
| GTACGGGATATTGATCCCAG+TGG | 0.719445 | 5.1:+72503931 | MS.gene017070:CDS |
| GTTCATCTTAGCTCTCACCA+AGG | 0.742877 | 5.1:+72501909 | MS.gene017070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 72501760 | 72514028 | 72501760 | ID=MS.gene017070 |
| chr5.1 | mRNA | 72501760 | 72514028 | 72501760 | ID=MS.gene017070.t1;Parent=MS.gene017070 |
| chr5.1 | exon | 72501760 | 72501930 | 72501760 | ID=MS.gene017070.t1.exon1;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72501760 | 72501930 | 72501760 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72502364 | 72502526 | 72502364 | ID=MS.gene017070.t1.exon2;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72502364 | 72502526 | 72502364 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72502654 | 72502775 | 72502654 | ID=MS.gene017070.t1.exon3;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72502654 | 72502775 | 72502654 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72503394 | 72503643 | 72503394 | ID=MS.gene017070.t1.exon4;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72503394 | 72503643 | 72503394 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72503845 | 72504022 | 72503845 | ID=MS.gene017070.t1.exon5;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72503845 | 72504022 | 72503845 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72504119 | 72504197 | 72504119 | ID=MS.gene017070.t1.exon6;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72504119 | 72504197 | 72504119 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72504295 | 72504380 | 72504295 | ID=MS.gene017070.t1.exon7;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72504295 | 72504380 | 72504295 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72505495 | 72505621 | 72505495 | ID=MS.gene017070.t1.exon8;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72505495 | 72505621 | 72505495 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72505771 | 72505803 | 72505771 | ID=MS.gene017070.t1.exon9;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72505771 | 72505803 | 72505771 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72506043 | 72506291 | 72506043 | ID=MS.gene017070.t1.exon10;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72506043 | 72506291 | 72506043 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72508280 | 72508357 | 72508280 | ID=MS.gene017070.t1.exon11;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72508280 | 72508357 | 72508280 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72508456 | 72508718 | 72508456 | ID=MS.gene017070.t1.exon12;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72508456 | 72508718 | 72508456 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72509863 | 72509922 | 72509863 | ID=MS.gene017070.t1.exon13;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72509863 | 72509922 | 72509863 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72510284 | 72510351 | 72510284 | ID=MS.gene017070.t1.exon14;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72510284 | 72510351 | 72510284 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72510525 | 72510630 | 72510525 | ID=MS.gene017070.t1.exon15;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72510525 | 72510630 | 72510525 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72510722 | 72510863 | 72510722 | ID=MS.gene017070.t1.exon16;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72510722 | 72510863 | 72510722 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72511475 | 72511573 | 72511475 | ID=MS.gene017070.t1.exon17;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72511475 | 72511573 | 72511475 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72512071 | 72512335 | 72512071 | ID=MS.gene017070.t1.exon18;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72512071 | 72512335 | 72512071 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72512807 | 72512874 | 72512807 | ID=MS.gene017070.t1.exon19;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72512807 | 72512874 | 72512807 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| chr5.1 | exon | 72513867 | 72514028 | 72513867 | ID=MS.gene017070.t1.exon20;Parent=MS.gene017070.t1 |
| chr5.1 | CDS | 72513867 | 72514028 | 72513867 | ID=cds.MS.gene017070.t1;Parent=MS.gene017070.t1 |
| Gene Sequence |
| Protein sequence |
