Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30421.t1 | XP_003627324.2 | 99.5 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 1.60E-235 | 825.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30421.t1 | Q9STS3 | 67.8 | 578 | 184 | 1 | 1 | 576 | 1 | 578 | 2.6e-170 | 600.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30421.t1 | G7L7L4 | 99.5 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 1.1e-235 | 825.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049887 | MS.gene30421 | 0.809557 | 1.78E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene30421 | 0.803936 | 2.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006802 | MS.gene30421 | PPI |
| MS.gene007855 | MS.gene30421 | PPI |
| MS.gene017070 | MS.gene30421 | PPI |
| MS.gene032323 | MS.gene30421 | PPI |
| MS.gene30421 | MS.gene95446 | PPI |
| MS.gene30421 | MS.gene93612 | PPI |
| MS.gene031482 | MS.gene30421 | PPI |
| MS.gene56142 | MS.gene30421 | PPI |
| MS.gene44181 | MS.gene30421 | PPI |
| MS.gene56523 | MS.gene30421 | PPI |
| MS.gene38996 | MS.gene30421 | PPI |
| MS.gene022091 | MS.gene30421 | PPI |
| MS.gene005307 | MS.gene30421 | PPI |
| MS.gene30421 | MS.gene93598 | PPI |
| MS.gene32240 | MS.gene30421 | PPI |
| MS.gene30421 | MS.gene96778 | PPI |
| MS.gene48038 | MS.gene30421 | PPI |
| MS.gene40797 | MS.gene30421 | PPI |
| MS.gene30421 | MS.gene97314 | PPI |
| MS.gene43188 | MS.gene30421 | PPI |
| MS.gene30421 | MS.gene057101 | PPI |
| MS.gene038286 | MS.gene30421 | PPI |
| MS.gene43131 | MS.gene30421 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30421.t1 | MTR_8g021140 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| MS.gene30421.t1 | MTR_1g103750 | 86.528 | 579 | 73 | 4 | 1 | 576 | 1 | 577 | 0.0 | 1045 |
| MS.gene30421.t1 | MTR_8g447330 | 44.787 | 422 | 134 | 12 | 1 | 367 | 1 | 378 | 1.50e-95 | 297 |
| MS.gene30421.t1 | MTR_8g447330 | 74.737 | 95 | 24 | 0 | 411 | 505 | 284 | 378 | 7.19e-43 | 158 |
| MS.gene30421.t1 | MTR_6g016680 | 28.159 | 277 | 190 | 2 | 270 | 546 | 460 | 727 | 1.01e-28 | 121 |
| MS.gene30421.t1 | MTR_7g019230 | 27.055 | 292 | 203 | 3 | 255 | 546 | 368 | 649 | 2.55e-26 | 114 |
| MS.gene30421.t1 | MTR_7g019230 | 27.055 | 292 | 203 | 3 | 255 | 546 | 382 | 663 | 3.16e-26 | 114 |
| MS.gene30421.t1 | MTR_2g019850 | 25.543 | 184 | 135 | 2 | 234 | 417 | 211 | 392 | 6.57e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30421.t1 | AT3G48150 | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| MS.gene30421.t1 | AT3G48150 | 73.978 | 465 | 119 | 1 | 114 | 576 | 1 | 465 | 0.0 | 750 |
| MS.gene30421.t1 | AT2G20000 | 27.243 | 301 | 210 | 2 | 255 | 555 | 434 | 725 | 2.65e-27 | 117 |
| MS.gene30421.t1 | AT3G16320 | 31.441 | 229 | 150 | 3 | 242 | 463 | 390 | 618 | 5.02e-27 | 116 |
| MS.gene30421.t1 | AT3G16320 | 31.441 | 229 | 150 | 3 | 242 | 463 | 401 | 629 | 5.46e-27 | 116 |
| MS.gene30421.t1 | AT2G20000 | 29.907 | 214 | 150 | 0 | 255 | 468 | 434 | 647 | 9.81e-27 | 115 |
| MS.gene30421.t1 | AT3G16320 | 31.944 | 144 | 96 | 1 | 242 | 383 | 401 | 544 | 2.14e-16 | 82.8 |
| MS.gene30421.t1 | AT3G16320 | 31.944 | 144 | 96 | 1 | 242 | 383 | 390 | 533 | 2.39e-16 | 82.8 |
Find 104 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 8.1:+78255123 | MS.gene30421:CDS |
| AAGATCTTATGCTCTTTATT+TGG | 0.192432 | 8.1:+78250599 | MS.gene30421:CDS |
| GGGAATTATTACAGTTTAAA+AGG | 0.197539 | 8.1:+78255144 | MS.gene30421:CDS |
| TAGTAAAACGCTGCCTCTTC+AGG | 0.213627 | 8.1:-78255585 | None:intergenic |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 8.1:+78255124 | MS.gene30421:CDS |
| CATTATGCATCCTTAATTCT+TGG | 0.262649 | 8.1:-78254849 | None:intergenic |
| GAATATCTACTCGGAACTTT+TGG | 0.287414 | 8.1:+78254889 | MS.gene30421:CDS |
| CATGTTCTTCGTGATCAAAT+TGG | 0.290724 | 8.1:+78250558 | MS.gene30421:CDS |
| TATCCGTCGTGAATACTCTA+TGG | 0.295435 | 8.1:-78255092 | None:intergenic |
| GTATGTGGCTACTCCGGTTA+TGG | 0.336064 | 8.1:+78250455 | MS.gene30421:CDS |
| CTCTGAAACCTCGTGTTTGA+TGG | 0.342510 | 8.1:-78250357 | None:intergenic |
| TTTGATGGAGTAAACTTAGA+TGG | 0.360770 | 8.1:-78250342 | None:intergenic |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 8.1:-78255123 | None:intergenic |
| TCTTGCAGCCAAATGATTCT+CGG | 0.391224 | 8.1:+78255412 | MS.gene30421:CDS |
| ACACGCCTTCTTGATTATAC+TGG | 0.393914 | 8.1:+78255732 | MS.gene30421:CDS |
| GATAGAACTTGACGGACCTC+TGG | 0.399973 | 8.1:+78254537 | MS.gene30421:CDS |
| CCAGTGCCTACCAAGAATTA+AGG | 0.405369 | 8.1:+78254839 | MS.gene30421:CDS |
| ATGTTCTTCGTGATCAAATT+GGG | 0.413042 | 8.1:+78250559 | MS.gene30421:CDS |
| AATTCATCCTCTTCCATAAC+CGG | 0.419596 | 8.1:-78250468 | None:intergenic |
| TCTCTCTGCTTGGACACTCA+TGG | 0.430654 | 8.1:+78255224 | MS.gene30421:CDS |
| TAAAAGTGATGCTGTGAATC+AGG | 0.432981 | 8.1:+78254561 | MS.gene30421:CDS |
| TGATCAAATTGGGAGGAAAT+CGG | 0.441059 | 8.1:+78250569 | MS.gene30421:CDS |
| GTCTTAATCTCAATAGTCAT+TGG | 0.443586 | 8.1:+78254797 | MS.gene30421:CDS |
| GCTATCAACTGTAGTGCATA+AGG | 0.444872 | 8.1:-78254767 | None:intergenic |
| CCGGCAATCGGTGTTGTTGT+TGG | 0.446248 | 8.1:-78250426 | None:intergenic |
| CCAACAACAACACCGATTGC+CGG | 0.446537 | 8.1:+78250426 | MS.gene30421:CDS |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | 8.1:+78254722 | MS.gene30421:CDS |
| CAAATTCTCTCAAACTGTAC+TGG | 0.449897 | 8.1:-78254948 | None:intergenic |
| GTCTCTATTCCTCTTCCAAA+TGG | 0.454376 | 8.1:+78250076 | MS.gene30421:CDS |
| GAAGAGGATGAATTTGTTGA+TGG | 0.454661 | 8.1:+78250477 | MS.gene30421:CDS |
| ATGCAGGGCAGCAGAGCAAT+TGG | 0.455938 | 8.1:+78250302 | MS.gene30421:intron |
| CCAGCTTCGCATGCTCGATA+AGG | 0.459121 | 8.1:+78255470 | MS.gene30421:CDS |
| AGGAATTCGTTTCATTAGAG+AGG | 0.459664 | 8.1:+78254581 | MS.gene30421:CDS |
| ATCCACAACCGAGAATCATT+TGG | 0.460057 | 8.1:-78255420 | None:intergenic |
| CTGAATGCAGCTTCGCTAGT+TGG | 0.462339 | 8.1:-78255551 | None:intergenic |
| CTCTCTGCTTGGACACTCAT+GGG | 0.470449 | 8.1:+78255225 | MS.gene30421:CDS |
| GATTGCCGGTGTTTCGTATG+TGG | 0.471511 | 8.1:+78250440 | MS.gene30421:CDS |
| TCCAAGTCTTCCACTCTGTA+AGG | 0.474410 | 8.1:-78255012 | None:intergenic |
| CCTTATCGAGCATGCGAAGC+TGG | 0.477242 | 8.1:-78255470 | None:intergenic |
| TTGGCGTAATCTCATGTGTT+CGG | 0.485540 | 8.1:-78250407 | None:intergenic |
| CCTTAATTCTTGGTAGGCAC+TGG | 0.488674 | 8.1:-78254839 | None:intergenic |
| GAGTATGGAATCTGAAGAGA+GGG | 0.490455 | 8.1:+78255623 | MS.gene30421:CDS |
| ACAGAAAGGCAATGATACTT+TGG | 0.492080 | 8.1:+78254675 | MS.gene30421:CDS |
| GGCTACTCCGGTTATGGAAG+AGG | 0.498305 | 8.1:+78250461 | MS.gene30421:CDS |
| CCATACAAGTACAAAAGAAA+AGG | 0.502137 | 8.1:-78254640 | None:intergenic |
| TCCTTACAGAGTGGAAGACT+TGG | 0.506974 | 8.1:+78255011 | MS.gene30421:CDS |
| CGCTGTGGATGCCTATCGTC+GGG | 0.517609 | 8.1:+78255281 | MS.gene30421:CDS |
| GACGGACCTCACATGGTTGA+GGG | 0.518538 | 8.1:+78255645 | MS.gene30421:CDS |
| TTTGGCACGCACAGTTCTTG+TGG | 0.519291 | 8.1:+78254693 | MS.gene30421:CDS |
| TGTGATTATCGTGCTTGGTA+TGG | 0.521126 | 8.1:+78255321 | MS.gene30421:CDS |
| CCGCTGTGGATGCCTATCGT+CGG | 0.525627 | 8.1:+78255280 | MS.gene30421:CDS |
| GCGAAGCTGCATTCAGAGCT+CGG | 0.527303 | 8.1:+78255558 | MS.gene30421:CDS |
| CGATAGGCATCCACAGCGGC+AGG | 0.530461 | 8.1:-78255276 | None:intergenic |
| ACATACGAAACACCGGCAAT+CGG | 0.530765 | 8.1:-78250438 | None:intergenic |
| CTCCAATGTTCTCTATGCTA+AGG | 0.531177 | 8.1:+78255041 | MS.gene30421:CDS |
| AGGCAATAAAATGTTACAGA+AGG | 0.533908 | 8.1:+78255490 | MS.gene30421:CDS |
| ACCCTTGGAACTGGAATGCA+TGG | 0.534200 | 8.1:+78254731 | MS.gene30421:CDS |
| ATGCATCCTTAATTCTTGGT+AGG | 0.534236 | 8.1:-78254845 | None:intergenic |
| AGCCAAATGATTCTCGGTTG+TGG | 0.535639 | 8.1:+78255418 | MS.gene30421:CDS |
| GGACGGACCTCACATGGTTG+AGG | 0.535859 | 8.1:+78255644 | MS.gene30421:CDS |
| GTCCATGCATTCCAGTTCCA+AGG | 0.536564 | 8.1:-78254733 | None:intergenic |
| GGAATTCGTTTCATTAGAGA+GGG | 0.537497 | 8.1:+78254582 | MS.gene30421:CDS |
| ACCCGTGTGATTATCGTGCT+TGG | 0.539237 | 8.1:+78255316 | MS.gene30421:CDS |
| AGTAAGTTACCATTTGGAAG+AGG | 0.540515 | 8.1:-78250085 | None:intergenic |
| TTATCGTGCTTGGTATGGAC+TGG | 0.541413 | 8.1:+78255326 | MS.gene30421:CDS |
| AACTTTGTCATTCTTGCGAA+GGG | 0.544567 | 8.1:-78254614 | None:intergenic |
| AGTAAAACGCTGCCTCTTCA+GGG | 0.544822 | 8.1:-78255584 | None:intergenic |
| TTCTCGGTTGTGGATAGCTA+TGG | 0.550619 | 8.1:+78255428 | MS.gene30421:CDS |
| TCTCAATAGTCATTGGATGA+AGG | 0.551481 | 8.1:+78254804 | MS.gene30421:CDS |
| AAGTAATGAAGTGAATAGAA+AGG | 0.552141 | 8.1:-78255375 | None:intergenic |
| CAACTTTGTCATTCTTGCGA+AGG | 0.553243 | 8.1:-78254615 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | 8.1:+78254716 | MS.gene30421:CDS |
| GGCAATAAAATGTTACAGAA+GGG | 0.556837 | 8.1:+78255491 | MS.gene30421:CDS |
| ATAGAACTTGACGGACCTCT+GGG | 0.563134 | 8.1:+78254538 | MS.gene30421:CDS |
| ATCCGTCGTGAATACTCTAT+GGG | 0.563752 | 8.1:-78255091 | None:intergenic |
| TTCCTTAGCATAGAGAACAT+TGG | 0.567573 | 8.1:-78255043 | None:intergenic |
| GGCCGGAGAAAAGCGAAAAG+AGG | 0.569695 | 8.1:+78254507 | MS.gene30421:intron |
| AGAGCTCGGACGCCCTGAAG+AGG | 0.573981 | 8.1:+78255572 | MS.gene30421:CDS |
| GAAGAGTTGATAGAACTTGA+CGG | 0.586173 | 8.1:+78254529 | MS.gene30421:CDS |
| TATATCAACAGCCCGACGAT+AGG | 0.587440 | 8.1:-78255292 | None:intergenic |
| TGTTTCGTATGTGGCTACTC+CGG | 0.589698 | 8.1:+78250449 | MS.gene30421:CDS |
| GGTCTCATACTGAAACAGAA+AGG | 0.599721 | 8.1:+78254661 | MS.gene30421:CDS |
| TCCATGCATTCCAGTTCCAA+GGG | 0.603030 | 8.1:-78254732 | None:intergenic |
| CTGGGCCAGTATAATCAAGA+AGG | 0.603911 | 8.1:-78255737 | None:intergenic |
| TATCGTGCTTGGTATGGACT+GGG | 0.604702 | 8.1:+78255327 | MS.gene30421:CDS |
| AGAGAGGGACGGACCTCACA+TGG | 0.611477 | 8.1:+78255638 | MS.gene30421:CDS |
| CTATATTTGAAGATCTGTTG+AGG | 0.612589 | 8.1:+78254983 | MS.gene30421:CDS |
| AGAGTATGGAATCTGAAGAG+AGG | 0.616817 | 8.1:+78255622 | MS.gene30421:CDS |
| CTTCATTAGAGAAATTAGGA+AGG | 0.619845 | 8.1:-78255937 | None:intergenic |
| AGCAAACCCTCAACCATGTG+AGG | 0.622036 | 8.1:-78255651 | None:intergenic |
| TCGAAATATGAATATCTACT+CGG | 0.623030 | 8.1:+78254880 | MS.gene30421:CDS |
| AAAGTTTACTAAGAGGGATG+CGG | 0.625884 | 8.1:+78255878 | MS.gene30421:CDS |
| TCGTGAATACTCTATGGGCA+AGG | 0.631954 | 8.1:-78255086 | None:intergenic |
| AGGGCAGCAGAGCAATTGGT+AGG | 0.639451 | 8.1:+78250306 | MS.gene30421:intron |
| TACCAAGCACGATAATCACA+CGG | 0.642802 | 8.1:-78255318 | None:intergenic |
| TTCTTCGTGATCAAATTGGG+AGG | 0.645388 | 8.1:+78250562 | MS.gene30421:CDS |
| ATGGAATCTGAAGAGAGGGA+CGG | 0.663753 | 8.1:+78255627 | MS.gene30421:CDS |
| AGTTTACTCCATCAAACACG+AGG | 0.685167 | 8.1:+78250349 | MS.gene30421:CDS |
| AGTAGCCACATACGAAACAC+CGG | 0.691312 | 8.1:-78250445 | None:intergenic |
| ACCAAGCACGATAATCACAC+GGG | 0.697673 | 8.1:-78255317 | None:intergenic |
| GAGGACTGATCCTTACAGAG+TGG | 0.728386 | 8.1:+78255002 | MS.gene30421:CDS |
| TGCCCATAGAGTATTCACGA+CGG | 0.777322 | 8.1:+78255089 | MS.gene30421:CDS |
| CCGACGATAGGCATCCACAG+CGG | 0.791397 | 8.1:-78255280 | None:intergenic |
| TCAAACACGAGGTTTCAGAG+AGG | 0.797609 | 8.1:+78250360 | MS.gene30421:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAAATAAATAAAT+CGG | - | chr8.1:78255789-78255808 | None:intergenic | 0.0% |
| !! | TAAAAATAGAAATATTGTAT+TGG | + | chr8.1:78251824-78251843 | MS.gene30421:intron | 10.0% |
| !!! | AAAAATCAGTTATATATTTT+AGG | + | chr8.1:78255175-78255194 | MS.gene30421:CDS | 10.0% |
| !! | AAATATTTCTTACTTATACA+AGG | - | chr8.1:78253712-78253731 | None:intergenic | 15.0% |
| !! | ATTTATTTAAATGTTACTCA+AGG | - | chr8.1:78254320-78254339 | None:intergenic | 15.0% |
| !! | TGTTTATATATAAACAAACT+AGG | + | chr8.1:78252053-78252072 | MS.gene30421:intron | 15.0% |
| !! | TTGATATATTTAGGAATTAA+TGG | + | chr8.1:78252530-78252549 | MS.gene30421:intron | 15.0% |
| !! | TTTATTTAAATGTTACTCAA+GGG | - | chr8.1:78254319-78254338 | None:intergenic | 15.0% |
| !!! | AACTTGCATATAAATTTTTT+GGG | - | chr8.1:78253934-78253953 | None:intergenic | 15.0% |
| !!! | ATAAGCTTTTATAATTACTT+AGG | - | chr8.1:78251698-78251717 | None:intergenic | 15.0% |
| !!! | CTATTAACATTTTGATTAAA+AGG | + | chr8.1:78253512-78253531 | MS.gene30421:intron | 15.0% |
| !!! | TAACTTGCATATAAATTTTT+TGG | - | chr8.1:78253935-78253954 | None:intergenic | 15.0% |
| !! | AAACATAAACATAGCAAAAT+AGG | - | chr8.1:78250652-78250671 | None:intergenic | 20.0% |
| !! | AAACTATATGAGAAACTATT+AGG | + | chr8.1:78252901-78252920 | MS.gene30421:intron | 20.0% |
| !! | AACACTAAAAATTAAAACAC+TGG | + | chr8.1:78253448-78253467 | MS.gene30421:intron | 20.0% |
| !! | AACATAAACATAGCAAAATA+GGG | - | chr8.1:78250651-78250670 | None:intergenic | 20.0% |
| !! | AGAAAACATTCTCTTAAAAA+GGG | - | chr8.1:78254160-78254179 | None:intergenic | 20.0% |
| !! | AGAAATATTGTATTGGAAAA+TGG | + | chr8.1:78251831-78251850 | MS.gene30421:intron | 20.0% |
| !! | CTGTATATATGATAATAGAT+TGG | - | chr8.1:78251150-78251169 | None:intergenic | 20.0% |
| !! | TATACCTATATGTTATACTA+GGG | + | chr8.1:78251605-78251624 | MS.gene30421:intron | 20.0% |
| !! | TTATACCTATATGTTATACT+AGG | + | chr8.1:78251604-78251623 | MS.gene30421:intron | 20.0% |
| !! | TTATTTAAATGTTACTCAAG+GGG | - | chr8.1:78254318-78254337 | None:intergenic | 20.0% |
| !!! | AAGAATTGATTTTGAATTGT+AGG | + | chr8.1:78250790-78250809 | MS.gene30421:intron | 20.0% |
| !!! | AGAGTTTGATTTTTATATCT+GGG | + | chr8.1:78252195-78252214 | MS.gene30421:intron | 20.0% |
| !!! | ATTCGTTTAAGATTAAACAA+AGG | + | chr8.1:78251761-78251780 | MS.gene30421:intron | 20.0% |
| !!! | CTATCTGATTTTTAAAAGAA+TGG | - | chr8.1:78251419-78251438 | None:intergenic | 20.0% |
| !!! | TCATATATTTTTTACTCACT+GGG | - | chr8.1:78255758-78255777 | None:intergenic | 20.0% |
| !!! | TGTGTTTAATTCAATTTTTG+TGG | + | chr8.1:78252338-78252357 | MS.gene30421:intron | 20.0% |
| !!! | TTCGTTTAAGATTAAACAAA+GGG | + | chr8.1:78251762-78251781 | MS.gene30421:intron | 20.0% |
| ! | AAATCCTATGATGTCAATAA+TGG | - | chr8.1:78252771-78252790 | None:intergenic | 25.0% |
| ! | AACGACGAGATTAAAAAATA+TGG | + | chr8.1:78253749-78253768 | MS.gene30421:intron | 25.0% |
| ! | AAGATCTTATGCTCTTTATT+TGG | + | chr8.1:78250599-78250618 | MS.gene30421:CDS | 25.0% |
| ! | AAGTAATGAAGTGAATAGAA+AGG | - | chr8.1:78255378-78255397 | None:intergenic | 25.0% |
| ! | ACAGAACATATAACAACATT+AGG | + | chr8.1:78253090-78253109 | MS.gene30421:intron | 25.0% |
| ! | ATAGGATGACAAAATTTATG+TGG | - | chr8.1:78251223-78251242 | None:intergenic | 25.0% |
| ! | ATATAAACAAACTAGGCTTT+GGG | + | chr8.1:78252060-78252079 | MS.gene30421:intron | 25.0% |
| ! | CAAACATACACTAAACATTA+TGG | - | chr8.1:78250758-78250777 | None:intergenic | 25.0% |
| ! | CAAATAGTCTCTAATACATT+TGG | - | chr8.1:78252124-78252143 | None:intergenic | 25.0% |
| ! | CAGAAAACATTCTCTTAAAA+AGG | - | chr8.1:78254161-78254180 | None:intergenic | 25.0% |
| ! | CATAATGTTTAGTGTATGTT+TGG | + | chr8.1:78250756-78250775 | MS.gene30421:intron | 25.0% |
| ! | CATTTAAAGAAACAGTAATG+AGG | - | chr8.1:78251272-78251291 | None:intergenic | 25.0% |
| ! | GAAGTAGAATGAAAATGAAA+TGG | - | chr8.1:78250278-78250297 | None:intergenic | 25.0% |
| ! | GCATAATTAATCAGTCTATT+TGG | - | chr8.1:78252404-78252423 | None:intergenic | 25.0% |
| ! | GGCTGTAATTTGATATATTT+AGG | + | chr8.1:78252521-78252540 | MS.gene30421:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+AGG | + | chr8.1:78255144-78255163 | MS.gene30421:CDS | 25.0% |
| ! | GTGCAAAAATAACTAAAAAG+AGG | - | chr8.1:78253968-78253987 | None:intergenic | 25.0% |
| ! | TATATAAACAAACTAGGCTT+TGG | + | chr8.1:78252059-78252078 | MS.gene30421:intron | 25.0% |
| ! | TATATAGCATGATTAAGACT+GGG | - | chr8.1:78254209-78254228 | None:intergenic | 25.0% |
| ! | TATATGAGAAACTATTAGGA+AGG | + | chr8.1:78252905-78252924 | MS.gene30421:intron | 25.0% |
| ! | TCATACTAAATCATTCTTTC+AGG | + | chr8.1:78255840-78255859 | MS.gene30421:intron | 25.0% |
| ! | TCCTAAAGTAGAAACAATTT+CGG | + | chr8.1:78250909-78250928 | MS.gene30421:intron | 25.0% |
| ! | TCGAAATATGAATATCTACT+CGG | + | chr8.1:78254880-78254899 | MS.gene30421:CDS | 25.0% |
| ! | TGTATTTAAATCAGCCAAAA+TGG | + | chr8.1:78251450-78251469 | MS.gene30421:intron | 25.0% |
| ! | TTAAATCTGATCATTTCTGT+TGG | + | chr8.1:78253363-78253382 | MS.gene30421:intron | 25.0% |
| ! | TTAACAAAAGTAAGCATAAG+TGG | - | chr8.1:78254184-78254203 | None:intergenic | 25.0% |
| ! | TTATATAGCATGATTAAGAC+TGG | - | chr8.1:78254210-78254229 | None:intergenic | 25.0% |
| ! | TTGTAATTTAGTACAACCTT+TGG | + | chr8.1:78252252-78252271 | MS.gene30421:intron | 25.0% |
| !! | AATTACTGATTAGAGAGATA+AGG | + | chr8.1:78253404-78253423 | MS.gene30421:intron | 25.0% |
| !! | ACATAAATTTTGTCATCCTA+TGG | + | chr8.1:78251222-78251241 | MS.gene30421:intron | 25.0% |
| !! | AGCTTTTATAATTACTTAGG+AGG | - | chr8.1:78251695-78251714 | None:intergenic | 25.0% |
| !! | ATCATGTGGATTATATAGTA+AGG | + | chr8.1:78252823-78252842 | MS.gene30421:intron | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | + | chr8.1:78255124-78255143 | MS.gene30421:CDS | 25.0% |
| !! | TATTGACATCATAGGATTTT+TGG | + | chr8.1:78252772-78252791 | MS.gene30421:intron | 25.0% |
| !! | TCAGAAGATAATTTTTAACC+TGG | + | chr8.1:78251561-78251580 | MS.gene30421:intron | 25.0% |
| !!! | ATTAATTATGCTGATTCTGT+TGG | + | chr8.1:78252413-78252432 | MS.gene30421:intron | 25.0% |
| !!! | ATTTGTTTTTTGATTCCTTG+TGG | + | chr8.1:78252139-78252158 | MS.gene30421:intron | 25.0% |
| !!! | GAGAGTTTGATTTTTATATC+TGG | + | chr8.1:78252194-78252213 | MS.gene30421:intron | 25.0% |
| !!! | GTCATATATTTTTTACTCAC+TGG | - | chr8.1:78255759-78255778 | None:intergenic | 25.0% |
| !!! | TACTATCCCAGTTTTATTTA+CGG | - | chr8.1:78253653-78253672 | None:intergenic | 25.0% |
| !!! | TTTTGGCTGATTTAAATACA+TGG | - | chr8.1:78251450-78251469 | None:intergenic | 25.0% |
| AAAAAGATTTGAAGAAGCAG+AGG | + | chr8.1:78255701-78255720 | MS.gene30421:CDS | 30.0% | |
| AAATATAATGCATTGAGCTC+TGG | + | chr8.1:78254336-78254355 | MS.gene30421:intron | 30.0% | |
| AAATGACTGAGTTTGGTATT+TGG | - | chr8.1:78254047-78254066 | None:intergenic | 30.0% | |
| AACATTAGGCAAGAATATAG+AGG | + | chr8.1:78253104-78253123 | MS.gene30421:intron | 30.0% | |
| ACAAAAATTATCTCTCTGCT+TGG | + | chr8.1:78255214-78255233 | MS.gene30421:CDS | 30.0% | |
| ACAGCAAAAAGTTTACTAAG+AGG | + | chr8.1:78255871-78255890 | MS.gene30421:CDS | 30.0% | |
| ACATATACTAAGCCAACATA+TGG | + | chr8.1:78251026-78251045 | MS.gene30421:intron | 30.0% | |
| ACATTAGGCAAGAATATAGA+GGG | + | chr8.1:78253105-78253124 | MS.gene30421:intron | 30.0% | |
| AGAAAGATCTGAAGATTGTT+TGG | - | chr8.1:78254115-78254134 | None:intergenic | 30.0% | |
| AGGCAATAAAATGTTACAGA+AGG | + | chr8.1:78255490-78255509 | MS.gene30421:CDS | 30.0% | |
| AGTTAGAGTAAGTTACCATT+TGG | - | chr8.1:78250094-78250113 | None:intergenic | 30.0% | |
| ATAAATTTACCAGCTTAAGC+AGG | - | chr8.1:78251496-78251515 | None:intergenic | 30.0% | |
| ATGTCCTATAATTGTTGAAG+TGG | + | chr8.1:78253051-78253070 | MS.gene30421:intron | 30.0% | |
| ATGTCTTCCGTAAATAAAAC+TGG | + | chr8.1:78253643-78253662 | MS.gene30421:intron | 30.0% | |
| ATGTTCTTCGTGATCAAATT+GGG | + | chr8.1:78250559-78250578 | MS.gene30421:CDS | 30.0% | |
| CAAAAAAGAGTTAGAGAGTA+TGG | + | chr8.1:78255608-78255627 | MS.gene30421:CDS | 30.0% | |
| CAAATAGAAATGACTGAGTT+TGG | - | chr8.1:78254054-78254073 | None:intergenic | 30.0% | |
| CAGCAAAAAGTTTACTAAGA+GGG | + | chr8.1:78255872-78255891 | MS.gene30421:CDS | 30.0% | |
| CATTATGCATCCTTAATTCT+TGG | - | chr8.1:78254852-78254871 | None:intergenic | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | - | chr8.1:78255126-78255145 | None:intergenic | 30.0% | |
| CCATACAAGTACAAAAGAAA+AGG | - | chr8.1:78254643-78254662 | None:intergenic | 30.0% | |
| CTATATTTGAAGATCTGTTG+AGG | + | chr8.1:78254983-78255002 | MS.gene30421:CDS | 30.0% | |
| GAAAGATCTGAAGATTGTTT+GGG | - | chr8.1:78254114-78254133 | None:intergenic | 30.0% | |
| GACATCAGTGTTATCAATAT+TGG | - | chr8.1:78251665-78251684 | None:intergenic | 30.0% | |
| GGCAATAAAATGTTACAGAA+GGG | + | chr8.1:78255491-78255510 | MS.gene30421:CDS | 30.0% | |
| GTAAATAAAACTGGGATAGT+AGG | + | chr8.1:78253652-78253671 | MS.gene30421:intron | 30.0% | |
| GTATTACTTACACAACTTCA+CGG | - | chr8.1:78253549-78253568 | None:intergenic | 30.0% | |
| GTCTTAATCTCAATAGTCAT+TGG | + | chr8.1:78254797-78254816 | MS.gene30421:CDS | 30.0% | |
| GTGTTATCAATATTGGATAG+CGG | - | chr8.1:78251658-78251677 | None:intergenic | 30.0% | |
| TAAATCATTCTTTCAGGAGA+GGG | + | chr8.1:78255846-78255865 | MS.gene30421:intron | 30.0% | |
| TAGACCCTAGTATAACATAT+AGG | - | chr8.1:78251612-78251631 | None:intergenic | 30.0% | |
| TATATGCAAGTTAAACCATG+AGG | + | chr8.1:78253942-78253961 | MS.gene30421:intron | 30.0% | |
| TATTTACGGAAGACATTGTT+GGG | - | chr8.1:78253639-78253658 | None:intergenic | 30.0% | |
| TGATTGAAGCTAAAATCATG+TGG | + | chr8.1:78252809-78252828 | MS.gene30421:intron | 30.0% | |
| TGTCCTATAATTGTTGAAGT+GGG | + | chr8.1:78253052-78253071 | MS.gene30421:intron | 30.0% | |
| TGTCTTCCGTAAATAAAACT+GGG | + | chr8.1:78253644-78253663 | MS.gene30421:intron | 30.0% | |
| TTAAGGAAACCAAAAGTAGT+AGG | - | chr8.1:78251909-78251928 | None:intergenic | 30.0% | |
| TTATTTACGGAAGACATTGT+TGG | - | chr8.1:78253640-78253659 | None:intergenic | 30.0% | |
| TTTGATGGAGTAAACTTAGA+TGG | - | chr8.1:78250345-78250364 | None:intergenic | 30.0% | |
| ! | AGGTAAAGTGATTTGTGTTT+GGG | + | chr8.1:78250810-78250829 | MS.gene30421:intron | 30.0% |
| ! | CCTGAATCTTGTTGTATTAT+TGG | + | chr8.1:78255123-78255142 | MS.gene30421:CDS | 30.0% |
| ! | CCTTTTCTTTTGTACTTGTA+TGG | + | chr8.1:78254640-78254659 | MS.gene30421:CDS | 30.0% |
| ! | GCAATTTTTCTACTGCAAAA+AGG | - | chr8.1:78253995-78254014 | None:intergenic | 30.0% |
| ! | GGACAAATTTTACACATGAT+TGG | + | chr8.1:78251059-78251078 | MS.gene30421:intron | 30.0% |
| ! | GGGTTTTCATATTAATCAGT+GGG | + | chr8.1:78252080-78252099 | MS.gene30421:intron | 30.0% |
| ! | GTTTCTCATATAGTTTTCCT+AGG | - | chr8.1:78252897-78252916 | None:intergenic | 30.0% |
| ! | TAGGTAAAGTGATTTGTGTT+TGG | + | chr8.1:78250809-78250828 | MS.gene30421:intron | 30.0% |
| ! | TGGGTTTTCATATTAATCAG+TGG | + | chr8.1:78252079-78252098 | MS.gene30421:intron | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr8.1:78252958-78252977 | MS.gene30421:intron | 30.0% |
| !! | ATGTTGGCTTAGTATATGTT+TGG | - | chr8.1:78251025-78251044 | None:intergenic | 30.0% |
| !! | CTGATAATAATTTTGATCCC+AGG | - | chr8.1:78253334-78253353 | None:intergenic | 30.0% |
| !! | TCCGAAATTGTTTCTACTTT+AGG | - | chr8.1:78250913-78250932 | None:intergenic | 30.0% |
| !! | TGATGGTGATTTTTATCTGT+TGG | + | chr8.1:78250494-78250513 | MS.gene30421:CDS | 30.0% |
| !!! | ATCTCGTCGTTTTTTTTTTC+TGG | - | chr8.1:78253740-78253759 | None:intergenic | 30.0% |
| !!! | CACTCTTTTTGATTTGAGTT+GGG | + | chr8.1:78253144-78253163 | MS.gene30421:intron | 30.0% |
| !!! | CAGCCAAAATGGTTTTAAAT+AGG | + | chr8.1:78251461-78251480 | MS.gene30421:intron | 30.0% |
| !!! | CCAAAATGGTTTTAAATAGG+CGG | + | chr8.1:78251464-78251483 | MS.gene30421:intron | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | + | chr8.1:78250982-78251001 | MS.gene30421:intron | 30.0% |
| !!! | TCACTCTTTTTGATTTGAGT+TGG | + | chr8.1:78253143-78253162 | MS.gene30421:intron | 30.0% |
| AAAACTGGGATAGTAGGTAT+TGG | + | chr8.1:78253658-78253677 | MS.gene30421:intron | 35.0% | |
| AAAATAAGCCCCTAGCTTAA+GGG | - | chr8.1:78251975-78251994 | None:intergenic | 35.0% | |
| AAAGTTTACTAAGAGGGATG+CGG | + | chr8.1:78255878-78255897 | MS.gene30421:CDS | 35.0% | |
| AACTTTGTCATTCTTGCGAA+GGG | - | chr8.1:78254617-78254636 | None:intergenic | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | + | chr8.1:78254716-78254735 | MS.gene30421:CDS | 35.0% | |
| AATTCATCCTCTTCCATAAC+CGG | - | chr8.1:78250471-78250490 | None:intergenic | 35.0% | |
| ACAGAAAGGCAATGATACTT+TGG | + | chr8.1:78254675-78254694 | MS.gene30421:CDS | 35.0% | |
| AGAAGAAACACCAACTTTGA+AGG | - | chr8.1:78253480-78253499 | None:intergenic | 35.0% | |
| AGAATTGATCCTAGCATGTT+TGG | - | chr8.1:78250963-78250982 | None:intergenic | 35.0% | |
| AGGAATTCGTTTCATTAGAG+AGG | + | chr8.1:78254581-78254600 | MS.gene30421:CDS | 35.0% | |
| AGTAAGTTACCATTTGGAAG+AGG | - | chr8.1:78250088-78250107 | None:intergenic | 35.0% | |
| ATAACTAAAAAGAGGCCTCA+TGG | - | chr8.1:78253960-78253979 | None:intergenic | 35.0% | |
| ATGCATCCTTAATTCTTGGT+AGG | - | chr8.1:78254848-78254867 | None:intergenic | 35.0% | |
| ATTTACGGAAGACATTGTTG+GGG | - | chr8.1:78253638-78253657 | None:intergenic | 35.0% | |
| CAAAAGTAGTAGGTTTGCAT+TGG | - | chr8.1:78251899-78251918 | None:intergenic | 35.0% | |
| CAAATTCTCTCAAACTGTAC+TGG | - | chr8.1:78254951-78254970 | None:intergenic | 35.0% | |
| CATGTTCTTCGTGATCAAAT+TGG | + | chr8.1:78250558-78250577 | MS.gene30421:CDS | 35.0% | |
| CATTCTACTTCCTTAATGCA+GGG | + | chr8.1:78250287-78250306 | MS.gene30421:intron | 35.0% | |
| CTAAATCATTCTTTCAGGAG+AGG | + | chr8.1:78255845-78255864 | MS.gene30421:intron | 35.0% | |
| GGAATTCGTTTCATTAGAGA+GGG | + | chr8.1:78254582-78254601 | MS.gene30421:CDS | 35.0% | |
| GGATCTAGAGATATATGAGT+TGG | + | chr8.1:78252926-78252945 | MS.gene30421:intron | 35.0% | |
| GTCCTATAATTGTTGAAGTG+GGG | + | chr8.1:78253053-78253072 | MS.gene30421:intron | 35.0% | |
| GTTGCCATTATTGACATCAT+AGG | + | chr8.1:78252764-78252783 | MS.gene30421:intron | 35.0% | |
| TAAAAGTGATGCTGTGAATC+AGG | + | chr8.1:78254561-78254580 | MS.gene30421:CDS | 35.0% | |
| TAATTACTTAGGAGGACTAC+TGG | - | chr8.1:78251687-78251706 | None:intergenic | 35.0% | |
| TCATTCTACTTCCTTAATGC+AGG | + | chr8.1:78250286-78250305 | MS.gene30421:intron | 35.0% | |
| TCCTATAATTGTTGAAGTGG+GGG | + | chr8.1:78253054-78253073 | MS.gene30421:intron | 35.0% | |
| TCTCAATAGTCATTGGATGA+AGG | + | chr8.1:78254804-78254823 | MS.gene30421:CDS | 35.0% | |
| TGATCAAATTGGGAGGAAAT+CGG | + | chr8.1:78250569-78250588 | MS.gene30421:CDS | 35.0% | |
| TTAGCATAACCCTTAAGCTA+GGG | + | chr8.1:78251963-78251982 | MS.gene30421:intron | 35.0% | |
| TTCCTTAGCATAGAGAACAT+TGG | - | chr8.1:78255046-78255065 | None:intergenic | 35.0% | |
| ! | ACATTTTACACCTCACACAA+GGG | - | chr8.1:78253227-78253246 | None:intergenic | 35.0% |
| ! | ATATGAGTTGGAGAAAGACA+TGG | + | chr8.1:78252938-78252957 | MS.gene30421:intron | 35.0% |
| ! | ATGTGTGATGCATTTTGCTA+TGG | + | chr8.1:78253283-78253302 | MS.gene30421:intron | 35.0% |
| ! | CAATGCAAACCTACTACTTT+TGG | + | chr8.1:78251897-78251916 | MS.gene30421:intron | 35.0% |
| ! | CATGTCCTTCCTTAATTTGA+AGG | - | chr8.1:78253311-78253330 | None:intergenic | 35.0% |
| ! | CGAATGTTCTTGACTTTTGA+AGG | - | chr8.1:78251746-78251765 | None:intergenic | 35.0% |
| ! | GAATATCTACTCGGAACTTT+TGG | + | chr8.1:78254889-78254908 | MS.gene30421:CDS | 35.0% |
| ! | TTTGTGGCCAAGTCTATTTT+GGG | + | chr8.1:78252354-78252373 | MS.gene30421:intron | 35.0% |
| ! | TTTTGTGGCCAAGTCTATTT+TGG | + | chr8.1:78252353-78252372 | MS.gene30421:intron | 35.0% |
| !! | ATGTTTGGTTCCACTTTTAG+AGG | - | chr8.1:78251010-78251029 | None:intergenic | 35.0% |
| !! | CCGCCTATTTAAAACCATTT+TGG | - | chr8.1:78251467-78251486 | None:intergenic | 35.0% |
| !! | GAAGAGGATGAATTTGTTGA+TGG | + | chr8.1:78250477-78250496 | MS.gene30421:CDS | 35.0% |
| !! | GAAGAGTTGATAGAACTTGA+CGG | + | chr8.1:78254529-78254548 | MS.gene30421:CDS | 35.0% |
| !! | TACCAACAATGCTTTGAAGT+TGG | + | chr8.1:78250721-78250740 | MS.gene30421:intron | 35.0% |
| !! | TGCACGTAGTAACTTTTTCT+TGG | - | chr8.1:78253890-78253909 | None:intergenic | 35.0% |
| !! | TGTTTGGTTCCACTTTTAGA+GGG | - | chr8.1:78251009-78251028 | None:intergenic | 35.0% |
| !!! | AGGAGCATTTCTTGTTTTTG+TGG | - | chr8.1:78252651-78252670 | None:intergenic | 35.0% |
| !!! | TCTGTTGGATTCCTTTTTTG+CGG | + | chr8.1:78252428-78252447 | MS.gene30421:intron | 35.0% |
| AAATTAAGGAAGGACATGCC+TGG | + | chr8.1:78253313-78253332 | MS.gene30421:intron | 40.0% | |
| AACCATCTCGTCTTTACCAA+AGG | - | chr8.1:78252271-78252290 | None:intergenic | 40.0% | |
| AACCGATCGTATATTCGAAC+TGG | + | chr8.1:78251111-78251130 | MS.gene30421:intron | 40.0% | |
| AACCTTTGGTAAAGACGAGA+TGG | + | chr8.1:78252266-78252285 | MS.gene30421:intron | 40.0% | |
| AAGACGAGATGGTTATGTGA+AGG | + | chr8.1:78252277-78252296 | MS.gene30421:intron | 40.0% | |
| AATGAGGTGAAAAGCTCAGA+AGG | - | chr8.1:78251256-78251275 | None:intergenic | 40.0% | |
| AATTAAGGAAGGACATGCCT+GGG | + | chr8.1:78253314-78253333 | MS.gene30421:intron | 40.0% | |
| ACACGCCTTCTTGATTATAC+TGG | + | chr8.1:78255732-78255751 | MS.gene30421:CDS | 40.0% | |
| ACCCAGTTCGAATATACGAT+CGG | - | chr8.1:78251116-78251135 | None:intergenic | 40.0% | |
| ACCCCCACTTCAACAATTAT+AGG | - | chr8.1:78253058-78253077 | None:intergenic | 40.0% | |
| ACCGATCGTATATTCGAACT+GGG | + | chr8.1:78251112-78251131 | MS.gene30421:intron | 40.0% | |
| AGAGTATGGAATCTGAAGAG+AGG | + | chr8.1:78255622-78255641 | MS.gene30421:CDS | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr8.1:78252839-78252858 | MS.gene30421:intron | 40.0% | |
| AGTCAGATCACTAGAGGTAA+GGG | + | chr8.1:78252867-78252886 | MS.gene30421:intron | 40.0% | |
| AGTTTACTCCATCAAACACG+AGG | + | chr8.1:78250349-78250368 | MS.gene30421:CDS | 40.0% | |
| ATCCACAACCGAGAATCATT+TGG | - | chr8.1:78255423-78255442 | None:intergenic | 40.0% | |
| ATCCGTCGTGAATACTCTAT+GGG | - | chr8.1:78255094-78255113 | None:intergenic | 40.0% | |
| CAAAATAAGCCCCTAGCTTA+AGG | - | chr8.1:78251976-78251995 | None:intergenic | 40.0% | |
| CAACTTTGTCATTCTTGCGA+AGG | - | chr8.1:78254618-78254637 | None:intergenic | 40.0% | |
| CAGCAAAAATCCCGCAAAAA+AGG | - | chr8.1:78252442-78252461 | None:intergenic | 40.0% | |
| CTCCAATGTTCTCTATGCTA+AGG | + | chr8.1:78255041-78255060 | MS.gene30421:CDS | 40.0% | |
| CTCCTTAACCAATGTCCTAA+GGG | - | chr8.1:78251803-78251822 | None:intergenic | 40.0% | |
| CTTATCCTACTAAGTGAGGT+CGG | - | chr8.1:78253003-78253022 | None:intergenic | 40.0% | |
| GAGTATGGAATCTGAAGAGA+GGG | + | chr8.1:78255623-78255642 | MS.gene30421:CDS | 40.0% | |
| GCACAGAGTTAAATGGACAA+TGG | + | chr8.1:78253166-78253185 | MS.gene30421:intron | 40.0% | |
| GCTATCAACTGTAGTGCATA+AGG | - | chr8.1:78254770-78254789 | None:intergenic | 40.0% | |
| GCTATGGTGCCTTCAAATTA+AGG | + | chr8.1:78253299-78253318 | MS.gene30421:intron | 40.0% | |
| GGTCTCATACTGAAACAGAA+AGG | + | chr8.1:78254661-78254680 | MS.gene30421:CDS | 40.0% | |
| GTCTCTATTCCTCTTCCAAA+TGG | + | chr8.1:78250076-78250095 | MS.gene30421:CDS | 40.0% | |
| GTTAGCATAACCCTTAAGCT+AGG | + | chr8.1:78251962-78251981 | MS.gene30421:intron | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | + | chr8.1:78254722-78254741 | MS.gene30421:CDS | 40.0% | |
| TACCAAGCACGATAATCACA+CGG | - | chr8.1:78255321-78255340 | None:intergenic | 40.0% | |
| TAGCATAACCCTTAAGCTAG+GGG | + | chr8.1:78251964-78251983 | MS.gene30421:intron | 40.0% | |
| TATCCGTCGTGAATACTCTA+TGG | - | chr8.1:78255095-78255114 | None:intergenic | 40.0% | |
| TATTCACGCACAACAGTTAC+TGG | - | chr8.1:78251394-78251413 | None:intergenic | 40.0% | |
| TCACTTAGTAGGATAAGGCT+TGG | + | chr8.1:78253006-78253025 | MS.gene30421:intron | 40.0% | |
| TCTCCTTAACCAATGTCCTA+AGG | - | chr8.1:78251804-78251823 | None:intergenic | 40.0% | |
| TCTTGCAGCCAAATGATTCT+CGG | + | chr8.1:78255412-78255431 | MS.gene30421:CDS | 40.0% | |
| TGGTGCCTTCAAATTAAGGA+AGG | + | chr8.1:78253303-78253322 | MS.gene30421:intron | 40.0% | |
| TGTGATTATCGTGCTTGGTA+TGG | + | chr8.1:78255321-78255340 | MS.gene30421:CDS | 40.0% | |
| TTCTTCGTGATCAAATTGGG+AGG | + | chr8.1:78250562-78250581 | MS.gene30421:CDS | 40.0% | |
| TTGGCGTAATCTCATGTGTT+CGG | - | chr8.1:78250410-78250429 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCTACTAAGTG+AGG | - | chr8.1:78253007-78253026 | None:intergenic | 40.0% |
| ! | ACTTAGATGTAGCAGCGTTT+TGG | + | chr8.1:78252162-78252181 | MS.gene30421:intron | 40.0% |
| ! | CACATTTTACACCTCACACA+AGG | - | chr8.1:78253228-78253247 | None:intergenic | 40.0% |
| ! | CTTGTTCAGGGCATTTGTTA+AGG | - | chr8.1:78251926-78251945 | None:intergenic | 40.0% |
| ! | TGTCATTGAACTTGTTCACC+AGG | - | chr8.1:78251582-78251601 | None:intergenic | 40.0% |
| !! | AAATACTCAAGAGTGCCCTT+AGG | + | chr8.1:78251785-78251804 | MS.gene30421:intron | 40.0% |
| !! | AATTTTGGCCCCTCTAAAAG+TGG | + | chr8.1:78250997-78251016 | MS.gene30421:intron | 40.0% |
| !! | GTCCAACTTCAAAGCATTGT+TGG | - | chr8.1:78250726-78250745 | None:intergenic | 40.0% |
| !! | GTTTGGTTCCACTTTTAGAG+GGG | - | chr8.1:78251008-78251027 | None:intergenic | 40.0% |
| !! | TATTGGATAGCGGAATATCG+CGG | - | chr8.1:78251648-78251667 | None:intergenic | 40.0% |
| !! | TTCCTCTTTTCGCTTTTCTC+CGG | - | chr8.1:78254512-78254531 | None:intergenic | 40.0% |
| !!! | CTGTTGGATTCCTTTTTTGC+GGG | + | chr8.1:78252429-78252448 | MS.gene30421:intron | 40.0% |
| AAACGTCGAGAATGACCCAT+CGG | - | chr8.1:78252234-78252253 | None:intergenic | 45.0% | |
| AAGAAATGCTCCTGTGAACG+CGG | + | chr8.1:78252658-78252677 | MS.gene30421:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr8.1:78252842-78252861 | MS.gene30421:intron | 45.0% | |
| ACATACGAAACACCGGCAAT+CGG | - | chr8.1:78250441-78250460 | None:intergenic | 45.0% | |
| ACCAAGCACGATAATCACAC+GGG | - | chr8.1:78255320-78255339 | None:intergenic | 45.0% | |
| AGCCAAATGATTCTCGGTTG+TGG | + | chr8.1:78255418-78255437 | MS.gene30421:CDS | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | + | chr8.1:78252843-78252862 | MS.gene30421:intron | 45.0% | |
| AGTAAAACGCTGCCTCTTCA+GGG | - | chr8.1:78255587-78255606 | None:intergenic | 45.0% | |
| AGTAGCCACATACGAAACAC+CGG | - | chr8.1:78250448-78250467 | None:intergenic | 45.0% | |
| ATACACACGTCTTCGATCAG+AGG | + | chr8.1:78250216-78250235 | MS.gene30421:intron | 45.0% | |
| ATGCACTGCATCAGATCAGT+TGG | - | chr8.1:78254380-78254399 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+CGG | + | chr8.1:78255627-78255646 | MS.gene30421:CDS | 45.0% | |
| ATTCGAACTGGGTAACGAAG+TGG | + | chr8.1:78251123-78251142 | MS.gene30421:intron | 45.0% | |
| CCAACATATGGTGTGCACAT+AGG | + | chr8.1:78251038-78251057 | MS.gene30421:intron | 45.0% | |
| CCAGTGCCTACCAAGAATTA+AGG | + | chr8.1:78254839-78254858 | MS.gene30421:CDS | 45.0% | |
| CCATGCTTTGTACTTCCTAC+AGG | + | chr8.1:78254486-78254505 | MS.gene30421:intron | 45.0% | |
| CCTATGTGCACACCATATGT+TGG | - | chr8.1:78251041-78251060 | None:intergenic | 45.0% | |
| CCTCCAACCCAAAATAGACT+TGG | - | chr8.1:78252364-78252383 | None:intergenic | 45.0% | |
| CCTTAATTCTTGGTAGGCAC+TGG | - | chr8.1:78254842-78254861 | None:intergenic | 45.0% | |
| CGAAAGCAACCAAACATGCT+AGG | + | chr8.1:78250951-78250970 | MS.gene30421:intron | 45.0% | |
| CGACCTCACTTAGTAGGATA+AGG | + | chr8.1:78253001-78253020 | MS.gene30421:intron | 45.0% | |
| CTGCTACATCTAAGTCCACA+AGG | - | chr8.1:78252157-78252176 | None:intergenic | 45.0% | |
| CTGGGCCAGTATAATCAAGA+AGG | - | chr8.1:78255740-78255759 | None:intergenic | 45.0% | |
| CTTCATGTTTCCCTTGTGTG+AGG | + | chr8.1:78253214-78253233 | MS.gene30421:intron | 45.0% | |
| GAGTCAGATCACTAGAGGTA+AGG | + | chr8.1:78252866-78252885 | MS.gene30421:intron | 45.0% | |
| GAGTTGGGCACAGAGTTAAA+TGG | + | chr8.1:78253159-78253178 | MS.gene30421:intron | 45.0% | |
| GTCTGTGTCAGTGTAAGAGA+GGG | - | chr8.1:78250138-78250157 | None:intergenic | 45.0% | |
| TAGTAAAACGCTGCCTCTTC+AGG | - | chr8.1:78255588-78255607 | None:intergenic | 45.0% | |
| TATATCAACAGCCCGACGAT+AGG | - | chr8.1:78255295-78255314 | None:intergenic | 45.0% | |
| TATCGTGCTTGGTATGGACT+GGG | + | chr8.1:78255327-78255346 | MS.gene30421:CDS | 45.0% | |
| TATGCTAACAAGTGCCCTGA+GGG | - | chr8.1:78251951-78251970 | None:intergenic | 45.0% | |
| TCAAACACGAGGTTTCAGAG+AGG | + | chr8.1:78250360-78250379 | MS.gene30421:CDS | 45.0% | |
| TCAGAAGGACACTCAACCAT+AGG | - | chr8.1:78251241-78251260 | None:intergenic | 45.0% | |
| TCCAAGTCTTCCACTCTGTA+AGG | - | chr8.1:78255015-78255034 | None:intergenic | 45.0% | |
| TCCATGCATTCCAGTTCCAA+GGG | - | chr8.1:78254735-78254754 | None:intergenic | 45.0% | |
| TCCTTACAGAGTGGAAGACT+TGG | + | chr8.1:78255011-78255030 | MS.gene30421:CDS | 45.0% | |
| TCGTGAATACTCTATGGGCA+AGG | - | chr8.1:78255089-78255108 | None:intergenic | 45.0% | |
| TGTAGCAACCCAGAATTGTG+TGG | - | chr8.1:78252696-78252715 | None:intergenic | 45.0% | |
| TGTCTGTGTCAGTGTAAGAG+AGG | - | chr8.1:78250139-78250158 | None:intergenic | 45.0% | |
| TGTTTCGTATGTGGCTACTC+CGG | + | chr8.1:78250449-78250468 | MS.gene30421:CDS | 45.0% | |
| TTATCGTGCTTGGTATGGAC+TGG | + | chr8.1:78255326-78255345 | MS.gene30421:CDS | 45.0% | |
| TTATGCTAACAAGTGCCCTG+AGG | - | chr8.1:78251952-78251971 | None:intergenic | 45.0% | |
| TTCTCGGTTGTGGATAGCTA+TGG | + | chr8.1:78255428-78255447 | MS.gene30421:CDS | 45.0% | |
| ! | ATAGAACTTGACGGACCTCT+GGG | + | chr8.1:78254538-78254557 | MS.gene30421:CDS | 45.0% |
| ! | CCTGTAGGAAGTACAAAGCA+TGG | - | chr8.1:78254489-78254508 | None:intergenic | 45.0% |
| ! | GGGGCCAAAATTGATTCTAG+AGG | - | chr8.1:78250989-78251008 | None:intergenic | 45.0% |
| ! | TCATGTTTCTAACCCTCCTC+TGG | - | chr8.1:78252308-78252327 | None:intergenic | 45.0% |
| ! | TGCCCATAGAGTATTCACGA+CGG | + | chr8.1:78255089-78255108 | MS.gene30421:CDS | 45.0% |
| ! | TGCCCTTAGGACATTGGTTA+AGG | + | chr8.1:78251798-78251817 | MS.gene30421:intron | 45.0% |
| !! | ACAGCATCACTTTTACCCAG+AGG | - | chr8.1:78254556-78254575 | None:intergenic | 45.0% |
| !! | CTCTGAAACCTCGTGTTTGA+TGG | - | chr8.1:78250360-78250379 | None:intergenic | 45.0% |
| !! | TGGCCAAGTCTATTTTGGGT+TGG | + | chr8.1:78252358-78252377 | MS.gene30421:intron | 45.0% |
| !! | TTTTGCTGTGTTGTCAGTCC+TGG | + | chr8.1:78252454-78252473 | MS.gene30421:intron | 45.0% |
| !!! | CCAAGTCTATTTTGGGTTGG+AGG | + | chr8.1:78252361-78252380 | MS.gene30421:intron | 45.0% |
| !!! | TTAAAATAGAAATTTTATAT+CGG | + | chr8.1:78253810-78253829 | MS.gene30421:intron | 5.0% |
| AACCCCAAAACTGGGATAGC+AGG | + | chr8.1:78252491-78252510 | MS.gene30421:intron | 50.0% | |
| ACCCCAAAACTGGGATAGCA+GGG | + | chr8.1:78252492-78252511 | MS.gene30421:intron | 50.0% | |
| ACCCGTGTGATTATCGTGCT+TGG | + | chr8.1:78255316-78255335 | MS.gene30421:CDS | 50.0% | |
| ACCCTTGGAACTGGAATGCA+TGG | + | chr8.1:78254731-78254750 | MS.gene30421:CDS | 50.0% | |
| AGCAAACCCTCAACCATGTG+AGG | - | chr8.1:78255654-78255673 | None:intergenic | 50.0% | |
| ATACTAGGGTCTAGCACACG+TGG | + | chr8.1:78251619-78251638 | MS.gene30421:intron | 50.0% | |
| CTAGAGGTAAGGGTAGACCT+AGG | + | chr8.1:78252877-78252896 | MS.gene30421:intron | 50.0% | |
| CTCTCTGCTTGGACACTCAT+GGG | + | chr8.1:78255225-78255244 | MS.gene30421:CDS | 50.0% | |
| CTGAATGCAGCTTCGCTAGT+TGG | - | chr8.1:78255554-78255573 | None:intergenic | 50.0% | |
| CTGGCTGTTGCCTTCAAAGT+TGG | + | chr8.1:78253467-78253486 | MS.gene30421:intron | 50.0% | |
| GAAAAATACTCCTGCCGCTG+TGG | + | chr8.1:78255266-78255285 | MS.gene30421:CDS | 50.0% | |
| GAATTGTGTGGCAACCGTCA+TGG | - | chr8.1:78252684-78252703 | None:intergenic | 50.0% | |
| GACGGTTGCCACACAATTCT+GGG | + | chr8.1:78252685-78252704 | MS.gene30421:intron | 50.0% | |
| GAGGACTGATCCTTACAGAG+TGG | + | chr8.1:78255002-78255021 | MS.gene30421:CDS | 50.0% | |
| GATTGCCGGTGTTTCGTATG+TGG | + | chr8.1:78250440-78250459 | MS.gene30421:CDS | 50.0% | |
| GCTTTGTACTTCCTACAGGC+CGG | + | chr8.1:78254490-78254509 | MS.gene30421:intron | 50.0% | |
| GGAGAGTAGATCAGATGGAG+GGG | + | chr8.1:78252844-78252863 | MS.gene30421:intron | 50.0% | |
| GTATGTGGCTACTCCGGTTA+TGG | + | chr8.1:78250455-78250474 | MS.gene30421:CDS | 50.0% | |
| GTCCATGCATTCCAGTTCCA+AGG | - | chr8.1:78254736-78254755 | None:intergenic | 50.0% | |
| TCTCTCTGCTTGGACACTCA+TGG | + | chr8.1:78255224-78255243 | MS.gene30421:CDS | 50.0% | |
| TGACGGTTGCCACACAATTC+TGG | + | chr8.1:78252684-78252703 | MS.gene30421:intron | 50.0% | |
| TGTAGCCGACCTCACTTAGT+AGG | + | chr8.1:78252995-78253014 | MS.gene30421:intron | 50.0% | |
| TTATGTGAAGGTAGCGCCAG+AGG | + | chr8.1:78252289-78252308 | MS.gene30421:intron | 50.0% | |
| TTTGGCACGCACAGTTCTTG+TGG | + | chr8.1:78254693-78254712 | MS.gene30421:CDS | 50.0% | |
| ! | ACACCCTGCTATCCCAGTTT+TGG | - | chr8.1:78252498-78252517 | None:intergenic | 50.0% |
| ! | ACCCTGCTATCCCAGTTTTG+GGG | - | chr8.1:78252496-78252515 | None:intergenic | 50.0% |
| ! | CACCCTGCTATCCCAGTTTT+GGG | - | chr8.1:78252497-78252516 | None:intergenic | 50.0% |
| ! | CCAACAACAACACCGATTGC+CGG | + | chr8.1:78250426-78250445 | MS.gene30421:CDS | 50.0% |
| ! | GATAGAACTTGACGGACCTC+TGG | + | chr8.1:78254537-78254556 | MS.gene30421:CDS | 50.0% |
| !! | CAAGAGTGCCCTTAGGACAT+TGG | + | chr8.1:78251792-78251811 | MS.gene30421:intron | 50.0% |
| !!! | AGCAGCGTTTTGGAGAGCTT+AGG | + | chr8.1:78252172-78252191 | MS.gene30421:intron | 50.0% |
| ACAACACGCTGCCGCTCTAA+CGG | + | chr8.1:78252736-78252755 | MS.gene30421:intron | 55.0% | |
| ACTGGGATAGCAGGGTGTGA+TGG | + | chr8.1:78252500-78252519 | MS.gene30421:intron | 55.0% | |
| AGAGCGGTCAACCCCAAAAC+TGG | + | chr8.1:78252482-78252501 | MS.gene30421:intron | 55.0% | |
| AGGGCAGCAGAGCAATTGGT+AGG | + | chr8.1:78250306-78250325 | MS.gene30421:intron | 55.0% | |
| ATGCAGGGCAGCAGAGCAAT+TGG | + | chr8.1:78250302-78250321 | MS.gene30421:intron | 55.0% | |
| CCAGCTTCGCATGCTCGATA+AGG | + | chr8.1:78255470-78255489 | MS.gene30421:CDS | 55.0% | |
| CCTTATCGAGCATGCGAAGC+TGG | - | chr8.1:78255473-78255492 | None:intergenic | 55.0% | |
| CGGCTAGAACCTGCTTAAGC+TGG | + | chr8.1:78251484-78251503 | MS.gene30421:intron | 55.0% | |
| GACGGACCTCACATGGTTGA+GGG | + | chr8.1:78255645-78255664 | MS.gene30421:CDS | 55.0% | |
| GAGCGGTCAACCCCAAAACT+GGG | + | chr8.1:78252483-78252502 | MS.gene30421:intron | 55.0% | |
| GAGGGGAGTCAGATCACTAG+AGG | + | chr8.1:78252861-78252880 | MS.gene30421:intron | 55.0% | |
| GCGAAGCTGCATTCAGAGCT+CGG | + | chr8.1:78255558-78255577 | MS.gene30421:CDS | 55.0% | |
| GGCCGGAGAAAAGCGAAAAG+AGG | + | chr8.1:78254507-78254526 | MS.gene30421:intron | 55.0% | |
| GGCTACTCCGGTTATGGAAG+AGG | + | chr8.1:78250461-78250480 | MS.gene30421:CDS | 55.0% | |
| GTCAGTCCTGGATAGCAGAG+CGG | + | chr8.1:78252466-78252485 | MS.gene30421:intron | 55.0% | |
| TGCTCTGCTGCCCTGCATTA+AGG | - | chr8.1:78250300-78250319 | None:intergenic | 55.0% | |
| TGGGTTGCTACAGCGAGTGT+GGG | + | chr8.1:78252704-78252723 | MS.gene30421:intron | 55.0% | |
| ! | GGTGTGTACGTTGTGCCGAT+GGG | + | chr8.1:78252216-78252235 | MS.gene30421:intron | 55.0% |
| ! | TGAGCTCTGGCGCATGCTAA+TGG | + | chr8.1:78254349-78254368 | MS.gene30421:intron | 55.0% |
| !! | CCGGCAATCGGTGTTGTTGT+TGG | - | chr8.1:78250429-78250448 | None:intergenic | 55.0% |
| !! | TTCGCTTTTCTCCGGCCTGT+AGG | - | chr8.1:78254504-78254523 | None:intergenic | 55.0% |
| AGAGAGGGACGGACCTCACA+TGG | + | chr8.1:78255638-78255657 | MS.gene30421:CDS | 60.0% | |
| CCGACGATAGGCATCCACAG+CGG | - | chr8.1:78255283-78255302 | None:intergenic | 60.0% | |
| CCGCTGTGGATGCCTATCGT+CGG | + | chr8.1:78255280-78255299 | MS.gene30421:CDS | 60.0% | |
| CGCTGTGGATGCCTATCGTC+GGG | + | chr8.1:78255281-78255300 | MS.gene30421:CDS | 60.0% | |
| CTGGGTTGCTACAGCGAGTG+TGG | + | chr8.1:78252703-78252722 | MS.gene30421:intron | 60.0% | |
| GCCCTGAACAAGTGCCCTCA+GGG | + | chr8.1:78251934-78251953 | MS.gene30421:intron | 60.0% | |
| GGACGGACCTCACATGGTTG+AGG | + | chr8.1:78255644-78255663 | MS.gene30421:CDS | 60.0% | |
| GGCAACTAGCGCCGTTAGAG+CGG | - | chr8.1:78252750-78252769 | None:intergenic | 60.0% | |
| GGGTGTGTACGTTGTGCCGA+TGG | + | chr8.1:78252215-78252234 | MS.gene30421:intron | 60.0% | |
| GGGTTGCTACAGCGAGTGTG+GGG | + | chr8.1:78252705-78252724 | MS.gene30421:intron | 60.0% | |
| GGTTGACCGCTCTGCTATCC+AGG | - | chr8.1:78252475-78252494 | None:intergenic | 60.0% | |
| GGTTGCTACAGCGAGTGTGG+GGG | + | chr8.1:78252706-78252725 | MS.gene30421:intron | 60.0% | |
| GTGAAGGTAGCGCCAGAGGA+GGG | + | chr8.1:78252293-78252312 | MS.gene30421:intron | 60.0% | |
| TCCTGTGAACGCGGCCATGA+CGG | + | chr8.1:78252667-78252686 | MS.gene30421:intron | 60.0% | |
| TGCCCTGAACAAGTGCCCTC+AGG | + | chr8.1:78251933-78251952 | MS.gene30421:intron | 60.0% | |
| TGTGAAGGTAGCGCCAGAGG+AGG | + | chr8.1:78252292-78252311 | MS.gene30421:intron | 60.0% | |
| !! | GCCCTGAGGGCACTTGTTCA+GGG | - | chr8.1:78251938-78251957 | None:intergenic | 60.0% |
| !! | TGCCCTGAGGGCACTTGTTC+AGG | - | chr8.1:78251939-78251958 | None:intergenic | 60.0% |
| ACCGTCATGGCCGCGTTCAC+AGG | - | chr8.1:78252671-78252690 | None:intergenic | 65.0% | |
| AGAGCTCGGACGCCCTGAAG+AGG | + | chr8.1:78255572-78255591 | MS.gene30421:CDS | 65.0% | |
| CGATAGGCATCCACAGCGGC+AGG | - | chr8.1:78255279-78255298 | None:intergenic | 65.0% | |
| TGCTACAGCGAGTGTGGGGG+CGG | + | chr8.1:78252709-78252728 | MS.gene30421:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 78250012 | 78255945 | 78250012 | ID=MS.gene30421 |
| chr8.1 | mRNA | 78250012 | 78255945 | 78250012 | ID=MS.gene30421.t1;Parent=MS.gene30421 |
| chr8.1 | exon | 78250012 | 78250097 | 78250012 | ID=MS.gene30421.t1.exon1;Parent=MS.gene30421.t1 |
| chr8.1 | CDS | 78250012 | 78250097 | 78250012 | ID=cds.MS.gene30421.t1;Parent=MS.gene30421.t1 |
| chr8.1 | exon | 78250308 | 78250620 | 78250308 | ID=MS.gene30421.t1.exon2;Parent=MS.gene30421.t1 |
| chr8.1 | CDS | 78250308 | 78250620 | 78250308 | ID=cds.MS.gene30421.t1;Parent=MS.gene30421.t1 |
| chr8.1 | exon | 78254508 | 78255758 | 78254508 | ID=MS.gene30421.t1.exon3;Parent=MS.gene30421.t1 |
| chr8.1 | CDS | 78254508 | 78255758 | 78254508 | ID=cds.MS.gene30421.t1;Parent=MS.gene30421.t1 |
| chr8.1 | exon | 78255862 | 78255945 | 78255862 | ID=MS.gene30421.t1.exon4;Parent=MS.gene30421.t1 |
| chr8.1 | CDS | 78255862 | 78255945 | 78255862 | ID=cds.MS.gene30421.t1;Parent=MS.gene30421.t1 |
| Gene Sequence |
| Protein sequence |
