Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25107.t1 | XP_003627324.2 | 99.5 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 1.60E-235 | 825.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25107.t1 | Q9STS3 | 67.8 | 578 | 184 | 1 | 1 | 576 | 1 | 578 | 2.6e-170 | 600.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25107.t1 | G7L7L4 | 99.5 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 1.1e-235 | 825.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038286 | MS.gene25107 | PPI |
| MS.gene25107 | MS.gene48038 | PPI |
| MS.gene25107 | MS.gene96778 | PPI |
| MS.gene006802 | MS.gene25107 | PPI |
| MS.gene25107 | MS.gene43131 | PPI |
| MS.gene25107 | MS.gene017070 | PPI |
| MS.gene25107 | MS.gene56523 | PPI |
| MS.gene25107 | MS.gene93598 | PPI |
| MS.gene25107 | MS.gene56142 | PPI |
| MS.gene25107 | MS.gene43188 | PPI |
| MS.gene38996 | MS.gene25107 | PPI |
| MS.gene25107 | MS.gene97314 | PPI |
| MS.gene25107 | MS.gene057101 | PPI |
| MS.gene022091 | MS.gene25107 | PPI |
| MS.gene005307 | MS.gene25107 | PPI |
| MS.gene25107 | MS.gene93612 | PPI |
| MS.gene25107 | MS.gene032323 | PPI |
| MS.gene25107 | MS.gene007855 | PPI |
| MS.gene32240 | MS.gene25107 | PPI |
| MS.gene25107 | MS.gene031482 | PPI |
| MS.gene40797 | MS.gene25107 | PPI |
| MS.gene25107 | MS.gene95446 | PPI |
| MS.gene25107 | MS.gene44181 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25107.t1 | MTR_8g021140 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| MS.gene25107.t1 | MTR_1g103750 | 86.528 | 579 | 73 | 4 | 1 | 576 | 1 | 577 | 0.0 | 1045 |
| MS.gene25107.t1 | MTR_8g447330 | 44.787 | 422 | 134 | 12 | 1 | 367 | 1 | 378 | 1.50e-95 | 297 |
| MS.gene25107.t1 | MTR_8g447330 | 74.737 | 95 | 24 | 0 | 411 | 505 | 284 | 378 | 7.19e-43 | 158 |
| MS.gene25107.t1 | MTR_6g016680 | 28.159 | 277 | 190 | 2 | 270 | 546 | 460 | 727 | 1.01e-28 | 121 |
| MS.gene25107.t1 | MTR_7g019230 | 27.055 | 292 | 203 | 3 | 255 | 546 | 368 | 649 | 2.55e-26 | 114 |
| MS.gene25107.t1 | MTR_7g019230 | 27.055 | 292 | 203 | 3 | 255 | 546 | 382 | 663 | 3.16e-26 | 114 |
| MS.gene25107.t1 | MTR_2g019850 | 25.543 | 184 | 135 | 2 | 234 | 417 | 211 | 392 | 6.57e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25107.t1 | AT3G48150 | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| MS.gene25107.t1 | AT3G48150 | 73.978 | 465 | 119 | 1 | 114 | 576 | 1 | 465 | 0.0 | 750 |
| MS.gene25107.t1 | AT2G20000 | 27.243 | 301 | 210 | 2 | 255 | 555 | 434 | 725 | 2.65e-27 | 117 |
| MS.gene25107.t1 | AT3G16320 | 31.441 | 229 | 150 | 3 | 242 | 463 | 390 | 618 | 5.02e-27 | 116 |
| MS.gene25107.t1 | AT3G16320 | 31.441 | 229 | 150 | 3 | 242 | 463 | 401 | 629 | 5.46e-27 | 116 |
| MS.gene25107.t1 | AT2G20000 | 29.907 | 214 | 150 | 0 | 255 | 468 | 434 | 647 | 9.81e-27 | 115 |
| MS.gene25107.t1 | AT3G16320 | 31.944 | 144 | 96 | 1 | 242 | 383 | 401 | 544 | 2.14e-16 | 82.8 |
| MS.gene25107.t1 | AT3G16320 | 31.944 | 144 | 96 | 1 | 242 | 383 | 390 | 533 | 2.39e-16 | 82.8 |
Find 102 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 8.4:+72557164 | MS.gene25107:CDS |
| AAGATCTTATGCTCTTTATT+TGG | 0.192432 | 8.4:+72552622 | MS.gene25107:CDS |
| GGGAATTATTACAGTTTAAA+AGG | 0.197539 | 8.4:+72557185 | MS.gene25107:CDS |
| TAGTAAAACGCTGCCTCTTC+AGG | 0.213627 | 8.4:-72557626 | None:intergenic |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 8.4:+72557165 | MS.gene25107:CDS |
| CATTATGCATCCTTAATTCT+TGG | 0.262649 | 8.4:-72556890 | None:intergenic |
| GAATATCTACTCGGAACTTT+TGG | 0.287414 | 8.4:+72556930 | MS.gene25107:CDS |
| CATGTTCTTCGTGATCAAAT+TGG | 0.290724 | 8.4:+72552581 | MS.gene25107:CDS |
| TATCCGTCGTGAATACTCTA+TGG | 0.295435 | 8.4:-72557133 | None:intergenic |
| GTATGTGGCTACTCCGGTTA+TGG | 0.336064 | 8.4:+72552478 | MS.gene25107:CDS |
| CTCTGAAACCTCGTGTTTGA+TGG | 0.342510 | 8.4:-72552380 | None:intergenic |
| TTTGATGGAGTAAACTTAGA+TGG | 0.360770 | 8.4:-72552365 | None:intergenic |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 8.4:-72557164 | None:intergenic |
| TCTTGCAGCCAAATGATTCT+CGG | 0.391224 | 8.4:+72557453 | MS.gene25107:CDS |
| ACACGCCTTCTTGATTATAC+TGG | 0.393914 | 8.4:+72557773 | MS.gene25107:CDS |
| GATAGAACTTGACGGACCTC+TGG | 0.399973 | 8.4:+72556578 | MS.gene25107:CDS |
| CCAGTGCCTACCAAGAATTA+AGG | 0.405369 | 8.4:+72556880 | MS.gene25107:CDS |
| ATGTTCTTCGTGATCAAATT+GGG | 0.413042 | 8.4:+72552582 | MS.gene25107:CDS |
| AATTCATCCTCTTCCATAAC+CGG | 0.419596 | 8.4:-72552491 | None:intergenic |
| TCTCTCTGCTTGGACACTCA+TGG | 0.430654 | 8.4:+72557265 | MS.gene25107:CDS |
| TAAAAGTGATGCTGTGAATC+AGG | 0.432981 | 8.4:+72556602 | MS.gene25107:CDS |
| TGATCAAATTGGGAGGAAAT+CGG | 0.441059 | 8.4:+72552592 | MS.gene25107:CDS |
| GTCTTAATCTCAATAGTCAT+TGG | 0.443586 | 8.4:+72556838 | MS.gene25107:CDS |
| GCTATCAACTGTAGTGCATA+AGG | 0.444872 | 8.4:-72556808 | None:intergenic |
| CCGGCAATCGGTGTTGTTGT+TGG | 0.446248 | 8.4:-72552449 | None:intergenic |
| CCAACAACAACACCGATTGC+CGG | 0.446537 | 8.4:+72552449 | MS.gene25107:CDS |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | 8.4:+72556763 | MS.gene25107:CDS |
| CAAATTCTCTCAAACTGTAC+TGG | 0.449897 | 8.4:-72556989 | None:intergenic |
| GTCTCTATTCCTCTTCCAAA+TGG | 0.454376 | 8.4:+72552099 | MS.gene25107:CDS |
| GAAGAGGATGAATTTGTTGA+TGG | 0.454661 | 8.4:+72552500 | MS.gene25107:CDS |
| ATGCAGGGCAGCAGAGCAAT+TGG | 0.455938 | 8.4:+72552325 | MS.gene25107:intron |
| CCAGCTTCGCATGCTCGATA+AGG | 0.459121 | 8.4:+72557511 | MS.gene25107:CDS |
| AGGAATTCGTTTCATTAGAG+AGG | 0.459664 | 8.4:+72556622 | MS.gene25107:CDS |
| ATCCACAACCGAGAATCATT+TGG | 0.460057 | 8.4:-72557461 | None:intergenic |
| CTGAATGCAGCTTCGCTAGT+TGG | 0.462339 | 8.4:-72557592 | None:intergenic |
| CTCTCTGCTTGGACACTCAT+GGG | 0.470449 | 8.4:+72557266 | MS.gene25107:CDS |
| GATTGCCGGTGTTTCGTATG+TGG | 0.471511 | 8.4:+72552463 | MS.gene25107:CDS |
| TCCAAGTCTTCCACTCTGTA+AGG | 0.474410 | 8.4:-72557053 | None:intergenic |
| CCTTATCGAGCATGCGAAGC+TGG | 0.477242 | 8.4:-72557511 | None:intergenic |
| TTGGCGTAATCTCATGTGTT+CGG | 0.485540 | 8.4:-72552430 | None:intergenic |
| CCTTAATTCTTGGTAGGCAC+TGG | 0.488674 | 8.4:-72556880 | None:intergenic |
| GAGTATGGAATCTGAAGAGA+GGG | 0.490455 | 8.4:+72557664 | MS.gene25107:CDS |
| ACAGAAAGGCAATGATACTT+TGG | 0.492080 | 8.4:+72556716 | MS.gene25107:CDS |
| GGCTACTCCGGTTATGGAAG+AGG | 0.498305 | 8.4:+72552484 | MS.gene25107:CDS |
| CCATACAAGTACAAAAGAAA+AGG | 0.502137 | 8.4:-72556681 | None:intergenic |
| TCCTTACAGAGTGGAAGACT+TGG | 0.506974 | 8.4:+72557052 | MS.gene25107:CDS |
| CGCTGTGGATGCCTATCGTC+GGG | 0.517609 | 8.4:+72557322 | MS.gene25107:CDS |
| GACGGACCTCACATGGTTGA+GGG | 0.518538 | 8.4:+72557686 | MS.gene25107:CDS |
| TTTGGCACGCACAGTTCTTG+TGG | 0.519291 | 8.4:+72556734 | MS.gene25107:CDS |
| TGTGATTATCGTGCTTGGTA+TGG | 0.521126 | 8.4:+72557362 | MS.gene25107:CDS |
| CCGCTGTGGATGCCTATCGT+CGG | 0.525627 | 8.4:+72557321 | MS.gene25107:CDS |
| GCGAAGCTGCATTCAGAGCT+CGG | 0.527303 | 8.4:+72557599 | MS.gene25107:CDS |
| CGATAGGCATCCACAGCGGC+AGG | 0.530461 | 8.4:-72557317 | None:intergenic |
| ACATACGAAACACCGGCAAT+CGG | 0.530765 | 8.4:-72552461 | None:intergenic |
| CTCCAATGTTCTCTATGCTA+AGG | 0.531177 | 8.4:+72557082 | MS.gene25107:CDS |
| AGGCAATAAAATGTTACAGA+AGG | 0.533908 | 8.4:+72557531 | MS.gene25107:CDS |
| ACCCTTGGAACTGGAATGCA+TGG | 0.534200 | 8.4:+72556772 | MS.gene25107:CDS |
| ATGCATCCTTAATTCTTGGT+AGG | 0.534236 | 8.4:-72556886 | None:intergenic |
| AGCCAAATGATTCTCGGTTG+TGG | 0.535639 | 8.4:+72557459 | MS.gene25107:CDS |
| GGACGGACCTCACATGGTTG+AGG | 0.535859 | 8.4:+72557685 | MS.gene25107:CDS |
| GTCCATGCATTCCAGTTCCA+AGG | 0.536564 | 8.4:-72556774 | None:intergenic |
| GGAATTCGTTTCATTAGAGA+GGG | 0.537497 | 8.4:+72556623 | MS.gene25107:CDS |
| ACCCGTGTGATTATCGTGCT+TGG | 0.539237 | 8.4:+72557357 | MS.gene25107:CDS |
| AGTAAGTTACCATTTGGAAG+AGG | 0.540515 | 8.4:-72552108 | None:intergenic |
| TTATCGTGCTTGGTATGGAC+TGG | 0.541413 | 8.4:+72557367 | MS.gene25107:CDS |
| AGTAAAACGCTGCCTCTTCA+GGG | 0.544822 | 8.4:-72557625 | None:intergenic |
| TTCTCGGTTGTGGATAGCTA+TGG | 0.550619 | 8.4:+72557469 | MS.gene25107:CDS |
| TCTCAATAGTCATTGGATGA+AGG | 0.551481 | 8.4:+72556845 | MS.gene25107:CDS |
| AAGTAATGAAGTGAATAGAA+AGG | 0.552141 | 8.4:-72557416 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | 8.4:+72556757 | MS.gene25107:CDS |
| GGCAATAAAATGTTACAGAA+GGG | 0.556837 | 8.4:+72557532 | MS.gene25107:CDS |
| ATAGAACTTGACGGACCTCT+GGG | 0.563134 | 8.4:+72556579 | MS.gene25107:CDS |
| ATCCGTCGTGAATACTCTAT+GGG | 0.563752 | 8.4:-72557132 | None:intergenic |
| TTCCTTAGCATAGAGAACAT+TGG | 0.567573 | 8.4:-72557084 | None:intergenic |
| GGCCGGAGAAAAGCGAAAAG+AGG | 0.569695 | 8.4:+72556548 | MS.gene25107:intron |
| AGAGCTCGGACGCCCTGAAG+AGG | 0.573981 | 8.4:+72557613 | MS.gene25107:CDS |
| GAAGAGTTGATAGAACTTGA+CGG | 0.586173 | 8.4:+72556570 | MS.gene25107:CDS |
| TATATCAACAGCCCGACGAT+AGG | 0.587440 | 8.4:-72557333 | None:intergenic |
| TGTTTCGTATGTGGCTACTC+CGG | 0.589698 | 8.4:+72552472 | MS.gene25107:CDS |
| GGTCTCATACTGAAACAGAA+AGG | 0.599721 | 8.4:+72556702 | MS.gene25107:CDS |
| TCCATGCATTCCAGTTCCAA+GGG | 0.603030 | 8.4:-72556773 | None:intergenic |
| CTGGGCCAGTATAATCAAGA+AGG | 0.603911 | 8.4:-72557778 | None:intergenic |
| TATCGTGCTTGGTATGGACT+GGG | 0.604702 | 8.4:+72557368 | MS.gene25107:CDS |
| AGAGAGGGACGGACCTCACA+TGG | 0.611477 | 8.4:+72557679 | MS.gene25107:CDS |
| CTATATTTGAAGATCTGTTG+AGG | 0.612589 | 8.4:+72557024 | MS.gene25107:CDS |
| AGAGTATGGAATCTGAAGAG+AGG | 0.616817 | 8.4:+72557663 | MS.gene25107:CDS |
| CTTCATTAGAGAAATTAGGA+AGG | 0.619845 | 8.4:-72557978 | None:intergenic |
| AGCAAACCCTCAACCATGTG+AGG | 0.622036 | 8.4:-72557692 | None:intergenic |
| TCGAAATATGAATATCTACT+CGG | 0.623030 | 8.4:+72556921 | MS.gene25107:CDS |
| AAAGTTTACTAAGAGGGATG+CGG | 0.625884 | 8.4:+72557919 | MS.gene25107:CDS |
| TCGTGAATACTCTATGGGCA+AGG | 0.631954 | 8.4:-72557127 | None:intergenic |
| AGGGCAGCAGAGCAATTGGT+AGG | 0.639451 | 8.4:+72552329 | MS.gene25107:intron |
| TACCAAGCACGATAATCACA+CGG | 0.642802 | 8.4:-72557359 | None:intergenic |
| TTCTTCGTGATCAAATTGGG+AGG | 0.645388 | 8.4:+72552585 | MS.gene25107:CDS |
| ATGGAATCTGAAGAGAGGGA+CGG | 0.663753 | 8.4:+72557668 | MS.gene25107:CDS |
| AGTTTACTCCATCAAACACG+AGG | 0.685167 | 8.4:+72552372 | MS.gene25107:CDS |
| AGTAGCCACATACGAAACAC+CGG | 0.691312 | 8.4:-72552468 | None:intergenic |
| ACCAAGCACGATAATCACAC+GGG | 0.697673 | 8.4:-72557358 | None:intergenic |
| GAGGACTGATCCTTACAGAG+TGG | 0.728386 | 8.4:+72557043 | MS.gene25107:CDS |
| TGCCCATAGAGTATTCACGA+CGG | 0.777322 | 8.4:+72557130 | MS.gene25107:CDS |
| CCGACGATAGGCATCCACAG+CGG | 0.791397 | 8.4:-72557321 | None:intergenic |
| TCAAACACGAGGTTTCAGAG+AGG | 0.797609 | 8.4:+72552383 | MS.gene25107:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAAATAAATAAAT+CGG | - | chr8.4:72557830-72557849 | None:intergenic | 0.0% |
| !! | TAAAAATAGAAATATTGTAT+TGG | + | chr8.4:72553847-72553866 | MS.gene25107:intron | 10.0% |
| !!! | AAAAATCAGTTATATATTTT+AGG | + | chr8.4:72557216-72557235 | MS.gene25107:CDS | 10.0% |
| !! | ATTTATTTAAATGTTACTCA+AGG | - | chr8.4:72556361-72556380 | None:intergenic | 15.0% |
| !! | TGTTTATATATAAACAAACT+AGG | + | chr8.4:72554076-72554095 | MS.gene25107:intron | 15.0% |
| !! | TTGATATATTTAGGAATTAA+TGG | + | chr8.4:72554553-72554572 | MS.gene25107:intron | 15.0% |
| !! | TTTATTTAAATGTTACTCAA+GGG | - | chr8.4:72556360-72556379 | None:intergenic | 15.0% |
| !!! | AACTTGCATATAAATTTTTT+GGG | - | chr8.4:72555975-72555994 | None:intergenic | 15.0% |
| !!! | ATAAGCTTTTATAATTACTT+AGG | - | chr8.4:72553721-72553740 | None:intergenic | 15.0% |
| !!! | CTATTAACATTTTGATTAAA+AGG | + | chr8.4:72555535-72555554 | MS.gene25107:intron | 15.0% |
| !!! | TAACTTGCATATAAATTTTT+TGG | - | chr8.4:72555976-72555995 | None:intergenic | 15.0% |
| !! | AAACATAAACATAGCAAAAT+AGG | - | chr8.4:72552675-72552694 | None:intergenic | 20.0% |
| !! | AAACTATATGAGAAACTATT+AGG | + | chr8.4:72554924-72554943 | MS.gene25107:intron | 20.0% |
| !! | AACACTAAAAATTAAAACAC+TGG | + | chr8.4:72555471-72555490 | MS.gene25107:intron | 20.0% |
| !! | AACATAAACATAGCAAAATA+GGG | - | chr8.4:72552674-72552693 | None:intergenic | 20.0% |
| !! | AGAAAACATTCTCTTAAAAA+GGG | - | chr8.4:72556201-72556220 | None:intergenic | 20.0% |
| !! | AGAAATATTGTATTGGAAAA+TGG | + | chr8.4:72553854-72553873 | MS.gene25107:intron | 20.0% |
| !! | ATATAAACAAACTAGGATTT+GGG | + | chr8.4:72554083-72554102 | MS.gene25107:intron | 20.0% |
| !! | CTGTATATATGATAATAGAT+TGG | - | chr8.4:72553173-72553192 | None:intergenic | 20.0% |
| !! | TATACCTATATGTTATACTA+GGG | + | chr8.4:72553628-72553647 | MS.gene25107:intron | 20.0% |
| !! | TATATAAACAAACTAGGATT+TGG | + | chr8.4:72554082-72554101 | MS.gene25107:intron | 20.0% |
| !! | TTAAATCTGATAATTTCTGT+TGG | + | chr8.4:72555386-72555405 | MS.gene25107:intron | 20.0% |
| !! | TTATACCTATATGTTATACT+AGG | + | chr8.4:72553627-72553646 | MS.gene25107:intron | 20.0% |
| !! | TTATTTAAATGTTACTCAAG+GGG | - | chr8.4:72556359-72556378 | None:intergenic | 20.0% |
| !!! | AACTATTTCTTACTTATACA+AGG | - | chr8.4:72555735-72555754 | None:intergenic | 20.0% |
| !!! | AAGAATTGATTTTGAATTGT+AGG | + | chr8.4:72552813-72552832 | MS.gene25107:intron | 20.0% |
| !!! | AGAGTTTGATTTTTATATCT+GGG | + | chr8.4:72554218-72554237 | MS.gene25107:intron | 20.0% |
| !!! | ATTCGTTTAAGATTAAACAA+AGG | + | chr8.4:72553784-72553803 | MS.gene25107:intron | 20.0% |
| !!! | CTATCTGATTTTTAAAAGAA+TGG | - | chr8.4:72553442-72553461 | None:intergenic | 20.0% |
| !!! | TAATAGTAGTAACTTTTTCT+TGG | - | chr8.4:72555913-72555932 | None:intergenic | 20.0% |
| !!! | TCATATATTTTTTACTCACT+GGG | - | chr8.4:72557799-72557818 | None:intergenic | 20.0% |
| !!! | TGTGTTTAATTCAATTTTTG+TGG | + | chr8.4:72554361-72554380 | MS.gene25107:intron | 20.0% |
| !!! | TTCGTTTAAGATTAAACAAA+GGG | + | chr8.4:72553785-72553804 | MS.gene25107:intron | 20.0% |
| ! | AAATCCTATGATGTCAATAA+TGG | - | chr8.4:72554794-72554813 | None:intergenic | 25.0% |
| ! | AACGACGAGATTAAAAAATA+TGG | + | chr8.4:72555772-72555791 | MS.gene25107:intron | 25.0% |
| ! | AAGATCTTATGCTCTTTATT+TGG | + | chr8.4:72552622-72552641 | MS.gene25107:CDS | 25.0% |
| ! | AAGTAATGAAGTGAATAGAA+AGG | - | chr8.4:72557419-72557438 | None:intergenic | 25.0% |
| ! | ACAGAACATATAACAACATT+AGG | + | chr8.4:72555113-72555132 | MS.gene25107:intron | 25.0% |
| ! | ATAGGATGACAAAATTTATG+TGG | - | chr8.4:72553246-72553265 | None:intergenic | 25.0% |
| ! | CAAACATACACTAAACATTA+TGG | - | chr8.4:72552781-72552800 | None:intergenic | 25.0% |
| ! | CAAATAGTCTCTAATACATT+TGG | - | chr8.4:72554147-72554166 | None:intergenic | 25.0% |
| ! | CAGAAAACATTCTCTTAAAA+AGG | - | chr8.4:72556202-72556221 | None:intergenic | 25.0% |
| ! | CATAATGTTTAGTGTATGTT+TGG | + | chr8.4:72552779-72552798 | MS.gene25107:intron | 25.0% |
| ! | CATTTAAAGAAACAGTAATG+AGG | - | chr8.4:72553295-72553314 | None:intergenic | 25.0% |
| ! | GCATAATTAATCAGTCTATT+TGG | - | chr8.4:72554427-72554446 | None:intergenic | 25.0% |
| ! | GGCTGTAATTTGATATATTT+AGG | + | chr8.4:72554544-72554563 | MS.gene25107:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+AGG | + | chr8.4:72557185-72557204 | MS.gene25107:CDS | 25.0% |
| ! | GTGCAAAAATAACTAAAAAG+AGG | - | chr8.4:72556009-72556028 | None:intergenic | 25.0% |
| ! | TATATAGCATGATTAAGACT+GGG | - | chr8.4:72556250-72556269 | None:intergenic | 25.0% |
| ! | TATATGAGAAACTATTAGGA+AGG | + | chr8.4:72554928-72554947 | MS.gene25107:intron | 25.0% |
| ! | TCATACTAAATCATTCTTTC+AGG | + | chr8.4:72557881-72557900 | MS.gene25107:intron | 25.0% |
| ! | TCCTAAAGTAGAAACAATTT+CGG | + | chr8.4:72552932-72552951 | MS.gene25107:intron | 25.0% |
| ! | TCGAAATATGAATATCTACT+CGG | + | chr8.4:72556921-72556940 | MS.gene25107:CDS | 25.0% |
| ! | TGTATTTAAATCAGCCAAAA+TGG | + | chr8.4:72553473-72553492 | MS.gene25107:intron | 25.0% |
| ! | TTAACAAAAGTAAGCATAAG+TGG | - | chr8.4:72556225-72556244 | None:intergenic | 25.0% |
| ! | TTATATAGCATGATTAAGAC+TGG | - | chr8.4:72556251-72556270 | None:intergenic | 25.0% |
| ! | TTGTAATTTAGTACAACCTT+TGG | + | chr8.4:72554275-72554294 | MS.gene25107:intron | 25.0% |
| !! | AATTACTGATTAGAGAGATA+AGG | + | chr8.4:72555427-72555446 | MS.gene25107:intron | 25.0% |
| !! | ACATAAATTTTGTCATCCTA+TGG | + | chr8.4:72553245-72553264 | MS.gene25107:intron | 25.0% |
| !! | AGCTTTTATAATTACTTAGG+AGG | - | chr8.4:72553718-72553737 | None:intergenic | 25.0% |
| !! | ATCATGTGGATTATATAGTA+AGG | + | chr8.4:72554846-72554865 | MS.gene25107:intron | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | + | chr8.4:72557165-72557184 | MS.gene25107:CDS | 25.0% |
| !! | TATTGACATCATAGGATTTT+TGG | + | chr8.4:72554795-72554814 | MS.gene25107:intron | 25.0% |
| !! | TCAGAAGATAATTTTTAACC+TGG | + | chr8.4:72553584-72553603 | MS.gene25107:intron | 25.0% |
| !!! | ATTAATTATGCTGATTCTGT+TGG | + | chr8.4:72554436-72554455 | MS.gene25107:intron | 25.0% |
| !!! | ATTTGTTTTTTGATTCCTTG+TGG | + | chr8.4:72554162-72554181 | MS.gene25107:intron | 25.0% |
| !!! | GAGAGTTTGATTTTTATATC+TGG | + | chr8.4:72554217-72554236 | MS.gene25107:intron | 25.0% |
| !!! | GTCATATATTTTTTACTCAC+TGG | - | chr8.4:72557800-72557819 | None:intergenic | 25.0% |
| !!! | TACTATCCCAGTTTTATTTA+CGG | - | chr8.4:72555676-72555695 | None:intergenic | 25.0% |
| !!! | TTTTGGCTGATTTAAATACA+TGG | - | chr8.4:72553473-72553492 | None:intergenic | 25.0% |
| AAAAAGATTTGAAGAAGCAG+AGG | + | chr8.4:72557742-72557761 | MS.gene25107:CDS | 30.0% | |
| AAATATAATGCATTGAGCTC+TGG | + | chr8.4:72556377-72556396 | MS.gene25107:intron | 30.0% | |
| AAATGACTGAGTTTGGTATT+TGG | - | chr8.4:72556088-72556107 | None:intergenic | 30.0% | |
| AACATTAGGCAAGAATATAG+AGG | + | chr8.4:72555127-72555146 | MS.gene25107:intron | 30.0% | |
| ACAAAAATTATCTCTCTGCT+TGG | + | chr8.4:72557255-72557274 | MS.gene25107:CDS | 30.0% | |
| ACAGCAAAAAGTTTACTAAG+AGG | + | chr8.4:72557912-72557931 | MS.gene25107:CDS | 30.0% | |
| ACATATACTAAGCCAACATA+TGG | + | chr8.4:72553049-72553068 | MS.gene25107:intron | 30.0% | |
| ACATTAGGCAAGAATATAGA+GGG | + | chr8.4:72555128-72555147 | MS.gene25107:intron | 30.0% | |
| AGAAAGATCTGAAGATTGTT+TGG | - | chr8.4:72556156-72556175 | None:intergenic | 30.0% | |
| AGGCAATAAAATGTTACAGA+AGG | + | chr8.4:72557531-72557550 | MS.gene25107:CDS | 30.0% | |
| AGTTAGAGTAAGTTACCATT+TGG | - | chr8.4:72552117-72552136 | None:intergenic | 30.0% | |
| ATGTCCTATAATTGTTGAAG+TGG | + | chr8.4:72555074-72555093 | MS.gene25107:intron | 30.0% | |
| ATGTCTTCCGTAAATAAAAC+TGG | + | chr8.4:72555666-72555685 | MS.gene25107:intron | 30.0% | |
| ATGTTCTTCGTGATCAAATT+GGG | + | chr8.4:72552582-72552601 | MS.gene25107:CDS | 30.0% | |
| CAAAAAAGAGTTAGAGAGTA+TGG | + | chr8.4:72557649-72557668 | MS.gene25107:CDS | 30.0% | |
| CAAATAGAAATGACTGAGTT+TGG | - | chr8.4:72556095-72556114 | None:intergenic | 30.0% | |
| CAGCAAAAAGTTTACTAAGA+GGG | + | chr8.4:72557913-72557932 | MS.gene25107:CDS | 30.0% | |
| CATTATGCATCCTTAATTCT+TGG | - | chr8.4:72556893-72556912 | None:intergenic | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | - | chr8.4:72557167-72557186 | None:intergenic | 30.0% | |
| CCATACAAGTACAAAAGAAA+AGG | - | chr8.4:72556684-72556703 | None:intergenic | 30.0% | |
| CTATATTTGAAGATCTGTTG+AGG | + | chr8.4:72557024-72557043 | MS.gene25107:CDS | 30.0% | |
| GAAAGATCTGAAGATTGTTT+GGG | - | chr8.4:72556155-72556174 | None:intergenic | 30.0% | |
| GAAGGAGAATGAAAATGAAA+TGG | - | chr8.4:72552301-72552320 | None:intergenic | 30.0% | |
| GACATCAGTGTTATCAATAT+TGG | - | chr8.4:72553688-72553707 | None:intergenic | 30.0% | |
| GGCAATAAAATGTTACAGAA+GGG | + | chr8.4:72557532-72557551 | MS.gene25107:CDS | 30.0% | |
| GTAAATAAAACTGGGATAGT+AGG | + | chr8.4:72555675-72555694 | MS.gene25107:intron | 30.0% | |
| GTATTACTTACACAACTTCA+CGG | - | chr8.4:72555572-72555591 | None:intergenic | 30.0% | |
| GTCTTAATCTCAATAGTCAT+TGG | + | chr8.4:72556838-72556857 | MS.gene25107:CDS | 30.0% | |
| GTGTTATCAATATTGGATAG+CGG | - | chr8.4:72553681-72553700 | None:intergenic | 30.0% | |
| TAAATCATTCTTTCAGGAGA+GGG | + | chr8.4:72557887-72557906 | MS.gene25107:intron | 30.0% | |
| TAGACCCTAGTATAACATAT+AGG | - | chr8.4:72553635-72553654 | None:intergenic | 30.0% | |
| TATATGCAAGTTAAACCATG+AGG | + | chr8.4:72555983-72556002 | MS.gene25107:intron | 30.0% | |
| TATTTACGGAAGACATTGTT+GGG | - | chr8.4:72555662-72555681 | None:intergenic | 30.0% | |
| TGATTGAAGCTAAAATCATG+TGG | + | chr8.4:72554832-72554851 | MS.gene25107:intron | 30.0% | |
| TGTCCTATAATTGTTGAAGT+GGG | + | chr8.4:72555075-72555094 | MS.gene25107:intron | 30.0% | |
| TGTCTTCCGTAAATAAAACT+GGG | + | chr8.4:72555667-72555686 | MS.gene25107:intron | 30.0% | |
| TTAAGGAAACCAAAAGTAGT+AGG | - | chr8.4:72553932-72553951 | None:intergenic | 30.0% | |
| TTATTTACGGAAGACATTGT+TGG | - | chr8.4:72555663-72555682 | None:intergenic | 30.0% | |
| TTTGATGGAGTAAACTTAGA+TGG | - | chr8.4:72552368-72552387 | None:intergenic | 30.0% | |
| ! | AGGTAAAGTGATTTGTGTTT+GGG | + | chr8.4:72552833-72552852 | MS.gene25107:intron | 30.0% |
| ! | CCTGAATCTTGTTGTATTAT+TGG | + | chr8.4:72557164-72557183 | MS.gene25107:CDS | 30.0% |
| ! | CCTTTTCTTTTGTACTTGTA+TGG | + | chr8.4:72556681-72556700 | MS.gene25107:CDS | 30.0% |
| ! | GCAATTTTTCTACTGCAAAA+AGG | - | chr8.4:72556036-72556055 | None:intergenic | 30.0% |
| ! | GGACAAATTTTACACATGAT+TGG | + | chr8.4:72553082-72553101 | MS.gene25107:intron | 30.0% |
| ! | GGGTTTTCATATTAATCAGT+GGG | + | chr8.4:72554103-72554122 | MS.gene25107:intron | 30.0% |
| ! | GTTTCTCATATAGTTTTCCT+AGG | - | chr8.4:72554920-72554939 | None:intergenic | 30.0% |
| ! | TAGGTAAAGTGATTTGTGTT+TGG | + | chr8.4:72552832-72552851 | MS.gene25107:intron | 30.0% |
| ! | TGGGTTTTCATATTAATCAG+TGG | + | chr8.4:72554102-72554121 | MS.gene25107:intron | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr8.4:72554981-72555000 | MS.gene25107:intron | 30.0% |
| !! | ATGTTGGCTTAGTATATGTT+TGG | - | chr8.4:72553048-72553067 | None:intergenic | 30.0% |
| !! | CTGATAATAATTTTGATCCC+AGG | - | chr8.4:72555357-72555376 | None:intergenic | 30.0% |
| !! | TCCGAAATTGTTTCTACTTT+AGG | - | chr8.4:72552936-72552955 | None:intergenic | 30.0% |
| !! | TGATGGTGATTTTTATCTGT+TGG | + | chr8.4:72552517-72552536 | MS.gene25107:CDS | 30.0% |
| !!! | ATCTCGTCGTTTTTTTTTTC+TGG | - | chr8.4:72555763-72555782 | None:intergenic | 30.0% |
| !!! | CACTCTTTTTGATTTGAGTT+GGG | + | chr8.4:72555167-72555186 | MS.gene25107:intron | 30.0% |
| !!! | CAGCCAAAATGGTTTTAAAT+AGG | + | chr8.4:72553484-72553503 | MS.gene25107:intron | 30.0% |
| !!! | CCAAAATGGTTTTAAATAGG+CGG | + | chr8.4:72553487-72553506 | MS.gene25107:intron | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | + | chr8.4:72553005-72553024 | MS.gene25107:intron | 30.0% |
| !!! | TCACTCTTTTTGATTTGAGT+TGG | + | chr8.4:72555166-72555185 | MS.gene25107:intron | 30.0% |
| AAAACTGGGATAGTAGGTAT+TGG | + | chr8.4:72555681-72555700 | MS.gene25107:intron | 35.0% | |
| AAAATAAGCCCCTAGCTTAA+GGG | - | chr8.4:72553998-72554017 | None:intergenic | 35.0% | |
| AAAGTTTACTAAGAGGGATG+CGG | + | chr8.4:72557919-72557938 | MS.gene25107:CDS | 35.0% | |
| AACCTATCGTATATTCGAAC+TGG | + | chr8.4:72553134-72553153 | MS.gene25107:intron | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | + | chr8.4:72556757-72556776 | MS.gene25107:CDS | 35.0% | |
| AATTCATCCTCTTCCATAAC+CGG | - | chr8.4:72552494-72552513 | None:intergenic | 35.0% | |
| ACAGAAAGGCAATGATACTT+TGG | + | chr8.4:72556716-72556735 | MS.gene25107:CDS | 35.0% | |
| ACCTATCGTATATTCGAACT+GGG | + | chr8.4:72553135-72553154 | MS.gene25107:intron | 35.0% | |
| AGAAGAAACACCAACTTTGA+AGG | - | chr8.4:72555503-72555522 | None:intergenic | 35.0% | |
| AGAATTGATCCTAGCATGTT+TGG | - | chr8.4:72552986-72553005 | None:intergenic | 35.0% | |
| AGGAATTCGTTTCATTAGAG+AGG | + | chr8.4:72556622-72556641 | MS.gene25107:CDS | 35.0% | |
| AGTAAGTTACCATTTGGAAG+AGG | - | chr8.4:72552111-72552130 | None:intergenic | 35.0% | |
| ATAAACTTACCAGCTTAAGC+AGG | - | chr8.4:72553519-72553538 | None:intergenic | 35.0% | |
| ATAACTAAAAAGAGGCCTCA+TGG | - | chr8.4:72556001-72556020 | None:intergenic | 35.0% | |
| ATGCATCCTTAATTCTTGGT+AGG | - | chr8.4:72556889-72556908 | None:intergenic | 35.0% | |
| ATTTACGGAAGACATTGTTG+GGG | - | chr8.4:72555661-72555680 | None:intergenic | 35.0% | |
| CAAAAGTAGTAGGTTTGCAT+TGG | - | chr8.4:72553922-72553941 | None:intergenic | 35.0% | |
| CAAATTCTCTCAAACTGTAC+TGG | - | chr8.4:72556992-72557011 | None:intergenic | 35.0% | |
| CATGTTCTTCGTGATCAAAT+TGG | + | chr8.4:72552581-72552600 | MS.gene25107:CDS | 35.0% | |
| CTAAATCATTCTTTCAGGAG+AGG | + | chr8.4:72557886-72557905 | MS.gene25107:intron | 35.0% | |
| GGAATTCGTTTCATTAGAGA+GGG | + | chr8.4:72556623-72556642 | MS.gene25107:CDS | 35.0% | |
| GGATCTAGAGATAAATGAGT+TGG | + | chr8.4:72554949-72554968 | MS.gene25107:intron | 35.0% | |
| GTCCTATAATTGTTGAAGTG+GGG | + | chr8.4:72555076-72555095 | MS.gene25107:intron | 35.0% | |
| GTTGCCATTATTGACATCAT+AGG | + | chr8.4:72554787-72554806 | MS.gene25107:intron | 35.0% | |
| TAAAAGTGATGCTGTGAATC+AGG | + | chr8.4:72556602-72556621 | MS.gene25107:CDS | 35.0% | |
| TAATTACTTAGGAGGACTAC+TGG | - | chr8.4:72553710-72553729 | None:intergenic | 35.0% | |
| TCCTATAATTGTTGAAGTGG+GGG | + | chr8.4:72555077-72555096 | MS.gene25107:intron | 35.0% | |
| TCTCAATAGTCATTGGATGA+AGG | + | chr8.4:72556845-72556864 | MS.gene25107:CDS | 35.0% | |
| TGATCAAATTGGGAGGAAAT+CGG | + | chr8.4:72552592-72552611 | MS.gene25107:CDS | 35.0% | |
| TTAAATGTTACTCAAGGGGA+TGG | - | chr8.4:72556355-72556374 | None:intergenic | 35.0% | |
| TTAGCATAACCCTTAAGCTA+GGG | + | chr8.4:72553986-72554005 | MS.gene25107:intron | 35.0% | |
| TTCCTTAGCATAGAGAACAT+TGG | - | chr8.4:72557087-72557106 | None:intergenic | 35.0% | |
| ! | AAATGAGTTGGAGAAAGACA+TGG | + | chr8.4:72554961-72554980 | MS.gene25107:intron | 35.0% |
| ! | ACATTTTACACCTCACACAA+GGG | - | chr8.4:72555250-72555269 | None:intergenic | 35.0% |
| ! | CAATGCAAACCTACTACTTT+TGG | + | chr8.4:72553920-72553939 | MS.gene25107:intron | 35.0% |
| ! | CATGTCCTTCCTTAATTTGA+AGG | - | chr8.4:72555334-72555353 | None:intergenic | 35.0% |
| ! | CGAATGTTCTTGACTTTTGA+AGG | - | chr8.4:72553769-72553788 | None:intergenic | 35.0% |
| ! | GAATATCTACTCGGAACTTT+TGG | + | chr8.4:72556930-72556949 | MS.gene25107:CDS | 35.0% |
| ! | TTTGTGGCCAAGTCTATTTT+GGG | + | chr8.4:72554377-72554396 | MS.gene25107:intron | 35.0% |
| ! | TTTTGTGGCCAAGTCTATTT+TGG | + | chr8.4:72554376-72554395 | MS.gene25107:intron | 35.0% |
| !! | ATGTTTGGTTCCACTTTTAG+AGG | - | chr8.4:72553033-72553052 | None:intergenic | 35.0% |
| !! | CCGCCTATTTAAAACCATTT+TGG | - | chr8.4:72553490-72553509 | None:intergenic | 35.0% |
| !! | GAAGAGGATGAATTTGTTGA+TGG | + | chr8.4:72552500-72552519 | MS.gene25107:CDS | 35.0% |
| !! | GAAGAGTTGATAGAACTTGA+CGG | + | chr8.4:72556570-72556589 | MS.gene25107:CDS | 35.0% |
| !! | TACCAACAATGCTTTGAAGT+TGG | + | chr8.4:72552744-72552763 | MS.gene25107:intron | 35.0% |
| !! | TGTTTGGTTCCACTTTTAGA+GGG | - | chr8.4:72553032-72553051 | None:intergenic | 35.0% |
| !!! | AGGAGCATTTCTTGTTTTTG+TGG | - | chr8.4:72554674-72554693 | None:intergenic | 35.0% |
| !!! | TCTGTTGGATTCCTTTTTTG+CGG | + | chr8.4:72554451-72554470 | MS.gene25107:intron | 35.0% |
| AAATTAAGGAAGGACATGCC+TGG | + | chr8.4:72555336-72555355 | MS.gene25107:intron | 40.0% | |
| AACCATCTCGTCTTTACCAA+AGG | - | chr8.4:72554294-72554313 | None:intergenic | 40.0% | |
| AACCTTTGGTAAAGACGAGA+TGG | + | chr8.4:72554289-72554308 | MS.gene25107:intron | 40.0% | |
| AAGACGAGATGGTTATGTGA+AGG | + | chr8.4:72554300-72554319 | MS.gene25107:intron | 40.0% | |
| AATGAGGTGAAAAGCTCAGA+AGG | - | chr8.4:72553279-72553298 | None:intergenic | 40.0% | |
| AATTAAGGAAGGACATGCCT+GGG | + | chr8.4:72555337-72555356 | MS.gene25107:intron | 40.0% | |
| ACACGCCTTCTTGATTATAC+TGG | + | chr8.4:72557773-72557792 | MS.gene25107:CDS | 40.0% | |
| ACCCAGTTCGAATATACGAT+AGG | - | chr8.4:72553139-72553158 | None:intergenic | 40.0% | |
| ACCCCCACTTCAACAATTAT+AGG | - | chr8.4:72555081-72555100 | None:intergenic | 40.0% | |
| AGAGTATGGAATCTGAAGAG+AGG | + | chr8.4:72557663-72557682 | MS.gene25107:CDS | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr8.4:72554862-72554881 | MS.gene25107:intron | 40.0% | |
| AGTCAGATCACTAGAGGTAA+GGG | + | chr8.4:72554890-72554909 | MS.gene25107:intron | 40.0% | |
| AGTTTACTCCATCAAACACG+AGG | + | chr8.4:72552372-72552391 | MS.gene25107:CDS | 40.0% | |
| ATCCACAACCGAGAATCATT+TGG | - | chr8.4:72557464-72557483 | None:intergenic | 40.0% | |
| ATCCGTCGTGAATACTCTAT+GGG | - | chr8.4:72557135-72557154 | None:intergenic | 40.0% | |
| CAAAATAAGCCCCTAGCTTA+AGG | - | chr8.4:72553999-72554018 | None:intergenic | 40.0% | |
| CAGCAAAAATCCCGCAAAAA+AGG | - | chr8.4:72554465-72554484 | None:intergenic | 40.0% | |
| CATTCTCCTTCCTTAATGCA+GGG | + | chr8.4:72552310-72552329 | MS.gene25107:intron | 40.0% | |
| CTCCAATGTTCTCTATGCTA+AGG | + | chr8.4:72557082-72557101 | MS.gene25107:CDS | 40.0% | |
| CTCCTTAACCAATGTCCTAA+GGG | - | chr8.4:72553826-72553845 | None:intergenic | 40.0% | |
| CTTATCCTACTAAGTGAGGT+CGG | - | chr8.4:72555026-72555045 | None:intergenic | 40.0% | |
| GAGTATGGAATCTGAAGAGA+GGG | + | chr8.4:72557664-72557683 | MS.gene25107:CDS | 40.0% | |
| GCACAGAGTTAAATGGACAA+TGG | + | chr8.4:72555189-72555208 | MS.gene25107:intron | 40.0% | |
| GCTATCAACTGTAGTGCATA+AGG | - | chr8.4:72556811-72556830 | None:intergenic | 40.0% | |
| GGTCTCATACTGAAACAGAA+AGG | + | chr8.4:72556702-72556721 | MS.gene25107:CDS | 40.0% | |
| GTCTCTATTCCTCTTCCAAA+TGG | + | chr8.4:72552099-72552118 | MS.gene25107:CDS | 40.0% | |
| GTTAGCATAACCCTTAAGCT+AGG | + | chr8.4:72553985-72554004 | MS.gene25107:intron | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | + | chr8.4:72556763-72556782 | MS.gene25107:CDS | 40.0% | |
| TACCAAGCACGATAATCACA+CGG | - | chr8.4:72557362-72557381 | None:intergenic | 40.0% | |
| TAGCATAACCCTTAAGCTAG+GGG | + | chr8.4:72553987-72554006 | MS.gene25107:intron | 40.0% | |
| TATCCGTCGTGAATACTCTA+TGG | - | chr8.4:72557136-72557155 | None:intergenic | 40.0% | |
| TATTCACGCACAACAGTTAC+TGG | - | chr8.4:72553417-72553436 | None:intergenic | 40.0% | |
| TCACTTAGTAGGATAAGGCT+TGG | + | chr8.4:72555029-72555048 | MS.gene25107:intron | 40.0% | |
| TCATTCTCCTTCCTTAATGC+AGG | + | chr8.4:72552309-72552328 | MS.gene25107:intron | 40.0% | |
| TCTCCTTAACCAATGTCCTA+AGG | - | chr8.4:72553827-72553846 | None:intergenic | 40.0% | |
| TCTTGCAGCCAAATGATTCT+CGG | + | chr8.4:72557453-72557472 | MS.gene25107:CDS | 40.0% | |
| TGGTGCCTTCAAATTAAGGA+AGG | + | chr8.4:72555326-72555345 | MS.gene25107:intron | 40.0% | |
| TGTGATTATCGTGCTTGGTA+TGG | + | chr8.4:72557362-72557381 | MS.gene25107:CDS | 40.0% | |
| TTCTTCGTGATCAAATTGGG+AGG | + | chr8.4:72552585-72552604 | MS.gene25107:CDS | 40.0% | |
| TTGGCGTAATCTCATGTGTT+CGG | - | chr8.4:72552433-72552452 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCTACTAAGTG+AGG | - | chr8.4:72555030-72555049 | None:intergenic | 40.0% |
| ! | ACTTAGATGTAGCAGCGTTT+TGG | + | chr8.4:72554185-72554204 | MS.gene25107:intron | 40.0% |
| ! | ATGTGTGATGCATTTTGCTG+TGG | + | chr8.4:72555306-72555325 | MS.gene25107:intron | 40.0% |
| ! | CACATTTTACACCTCACACA+AGG | - | chr8.4:72555251-72555270 | None:intergenic | 40.0% |
| ! | CTTGTTCAGGGCATTTGTTA+AGG | - | chr8.4:72553949-72553968 | None:intergenic | 40.0% |
| ! | TGTCATTGAACTTGTTCACC+AGG | - | chr8.4:72553605-72553624 | None:intergenic | 40.0% |
| !! | AAATACTCAAGAGTGCCCTT+AGG | + | chr8.4:72553808-72553827 | MS.gene25107:intron | 40.0% |
| !! | AATTTTGGCCCCTCTAAAAG+TGG | + | chr8.4:72553020-72553039 | MS.gene25107:intron | 40.0% |
| !! | GTCCAACTTCAAAGCATTGT+TGG | - | chr8.4:72552749-72552768 | None:intergenic | 40.0% |
| !! | GTTTGGTTCCACTTTTAGAG+GGG | - | chr8.4:72553031-72553050 | None:intergenic | 40.0% |
| !! | TATTGGATAGCGGAATATCG+CGG | - | chr8.4:72553671-72553690 | None:intergenic | 40.0% |
| !! | TTCCTCTTTTCGCTTTTCTC+CGG | - | chr8.4:72556553-72556572 | None:intergenic | 40.0% |
| !!! | CTGTTGGATTCCTTTTTTGC+GGG | + | chr8.4:72554452-72554471 | MS.gene25107:intron | 40.0% |
| AAACGTCGAGAATGACCCAT+CGG | - | chr8.4:72554257-72554276 | None:intergenic | 45.0% | |
| AAGAAATGCTCCTGTGAACG+CGG | + | chr8.4:72554681-72554700 | MS.gene25107:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr8.4:72554865-72554884 | MS.gene25107:intron | 45.0% | |
| ACATACGAAACACCGGCAAT+CGG | - | chr8.4:72552464-72552483 | None:intergenic | 45.0% | |
| ACCAAGCACGATAATCACAC+GGG | - | chr8.4:72557361-72557380 | None:intergenic | 45.0% | |
| AGCCAAATGATTCTCGGTTG+TGG | + | chr8.4:72557459-72557478 | MS.gene25107:CDS | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | + | chr8.4:72554866-72554885 | MS.gene25107:intron | 45.0% | |
| AGTAAAACGCTGCCTCTTCA+GGG | - | chr8.4:72557628-72557647 | None:intergenic | 45.0% | |
| AGTAGCCACATACGAAACAC+CGG | - | chr8.4:72552471-72552490 | None:intergenic | 45.0% | |
| ATACACACGTCTTCGATCAG+AGG | + | chr8.4:72552239-72552258 | MS.gene25107:intron | 45.0% | |
| ATGCACTGCATCAGATCAGT+TGG | - | chr8.4:72556421-72556440 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+CGG | + | chr8.4:72557668-72557687 | MS.gene25107:CDS | 45.0% | |
| ATTCGAACTGGGTAACGAAG+TGG | + | chr8.4:72553146-72553165 | MS.gene25107:intron | 45.0% | |
| CCAACATATGGTGTGCACAT+AGG | + | chr8.4:72553061-72553080 | MS.gene25107:intron | 45.0% | |
| CCAGTGCCTACCAAGAATTA+AGG | + | chr8.4:72556880-72556899 | MS.gene25107:CDS | 45.0% | |
| CCATGCTTTGTACTTCCTAC+AGG | + | chr8.4:72556527-72556546 | MS.gene25107:intron | 45.0% | |
| CCTATGTGCACACCATATGT+TGG | - | chr8.4:72553064-72553083 | None:intergenic | 45.0% | |
| CCTCCAACCCAAAATAGACT+TGG | - | chr8.4:72554387-72554406 | None:intergenic | 45.0% | |
| CCTTAATTCTTGGTAGGCAC+TGG | - | chr8.4:72556883-72556902 | None:intergenic | 45.0% | |
| CGAAAGCAACCAAACATGCT+AGG | + | chr8.4:72552974-72552993 | MS.gene25107:intron | 45.0% | |
| CGACCTCACTTAGTAGGATA+AGG | + | chr8.4:72555024-72555043 | MS.gene25107:intron | 45.0% | |
| CTGCTACATCTAAGTCCACA+AGG | - | chr8.4:72554180-72554199 | None:intergenic | 45.0% | |
| CTGGGCCAGTATAATCAAGA+AGG | - | chr8.4:72557781-72557800 | None:intergenic | 45.0% | |
| CTTCATGTTTCCCTTGTGTG+AGG | + | chr8.4:72555237-72555256 | MS.gene25107:intron | 45.0% | |
| GAGTCAGATCACTAGAGGTA+AGG | + | chr8.4:72554889-72554908 | MS.gene25107:intron | 45.0% | |
| GAGTTGGGCACAGAGTTAAA+TGG | + | chr8.4:72555182-72555201 | MS.gene25107:intron | 45.0% | |
| GCTGTGGTGCCTTCAAATTA+AGG | + | chr8.4:72555322-72555341 | MS.gene25107:intron | 45.0% | |
| TAGTAAAACGCTGCCTCTTC+AGG | - | chr8.4:72557629-72557648 | None:intergenic | 45.0% | |
| TATATCAACAGCCCGACGAT+AGG | - | chr8.4:72557336-72557355 | None:intergenic | 45.0% | |
| TATCGTGCTTGGTATGGACT+GGG | + | chr8.4:72557368-72557387 | MS.gene25107:CDS | 45.0% | |
| TATGCTAACAAGTGCCCTGA+GGG | - | chr8.4:72553974-72553993 | None:intergenic | 45.0% | |
| TCAAACACGAGGTTTCAGAG+AGG | + | chr8.4:72552383-72552402 | MS.gene25107:CDS | 45.0% | |
| TCAGAAGGACACTCAACCAT+AGG | - | chr8.4:72553264-72553283 | None:intergenic | 45.0% | |
| TCCAAGTCTTCCACTCTGTA+AGG | - | chr8.4:72557056-72557075 | None:intergenic | 45.0% | |
| TCCATGCATTCCAGTTCCAA+GGG | - | chr8.4:72556776-72556795 | None:intergenic | 45.0% | |
| TCCTTACAGAGTGGAAGACT+TGG | + | chr8.4:72557052-72557071 | MS.gene25107:CDS | 45.0% | |
| TCGTGAATACTCTATGGGCA+AGG | - | chr8.4:72557130-72557149 | None:intergenic | 45.0% | |
| TGTAGCAACCCAGAATTGTG+TGG | - | chr8.4:72554719-72554738 | None:intergenic | 45.0% | |
| TGTTTCGTATGTGGCTACTC+CGG | + | chr8.4:72552472-72552491 | MS.gene25107:CDS | 45.0% | |
| TTATCGTGCTTGGTATGGAC+TGG | + | chr8.4:72557367-72557386 | MS.gene25107:CDS | 45.0% | |
| TTATGCTAACAAGTGCCCTG+AGG | - | chr8.4:72553975-72553994 | None:intergenic | 45.0% | |
| TTCTCGGTTGTGGATAGCTA+TGG | + | chr8.4:72557469-72557488 | MS.gene25107:CDS | 45.0% | |
| ! | ATAGAACTTGACGGACCTCT+GGG | + | chr8.4:72556579-72556598 | MS.gene25107:CDS | 45.0% |
| ! | CCTGTAGGAAGTACAAAGCA+TGG | - | chr8.4:72556530-72556549 | None:intergenic | 45.0% |
| ! | GGGGCCAAAATTGATTCTAG+AGG | - | chr8.4:72553012-72553031 | None:intergenic | 45.0% |
| ! | TCATGTTTCTAACCCTCCTC+TGG | - | chr8.4:72554331-72554350 | None:intergenic | 45.0% |
| ! | TGCCCATAGAGTATTCACGA+CGG | + | chr8.4:72557130-72557149 | MS.gene25107:CDS | 45.0% |
| ! | TGCCCTTAGGACATTGGTTA+AGG | + | chr8.4:72553821-72553840 | MS.gene25107:intron | 45.0% |
| !! | ACAGCATCACTTTTACCCAG+AGG | - | chr8.4:72556597-72556616 | None:intergenic | 45.0% |
| !! | CTCTGAAACCTCGTGTTTGA+TGG | - | chr8.4:72552383-72552402 | None:intergenic | 45.0% |
| !! | TGGCCAAGTCTATTTTGGGT+TGG | + | chr8.4:72554381-72554400 | MS.gene25107:intron | 45.0% |
| !! | TTTTGCTGTGTTGTCAGTCC+TGG | + | chr8.4:72554477-72554496 | MS.gene25107:intron | 45.0% |
| !!! | CCAAGTCTATTTTGGGTTGG+AGG | + | chr8.4:72554384-72554403 | MS.gene25107:intron | 45.0% |
| !!! | TTAAAATAGAAATTTTATAT+TGG | + | chr8.4:72555833-72555852 | MS.gene25107:intron | 5.0% |
| AACCCCAAAACTGGGATAGC+AGG | + | chr8.4:72554514-72554533 | MS.gene25107:intron | 50.0% | |
| ACCCCAAAACTGGGATAGCA+GGG | + | chr8.4:72554515-72554534 | MS.gene25107:intron | 50.0% | |
| ACCCGTGTGATTATCGTGCT+TGG | + | chr8.4:72557357-72557376 | MS.gene25107:CDS | 50.0% | |
| ACCCTTGGAACTGGAATGCA+TGG | + | chr8.4:72556772-72556791 | MS.gene25107:CDS | 50.0% | |
| AGCAAACCCTCAACCATGTG+AGG | - | chr8.4:72557695-72557714 | None:intergenic | 50.0% | |
| ATACTAGGGTCTAGCACACG+TGG | + | chr8.4:72553642-72553661 | MS.gene25107:intron | 50.0% | |
| CTAGAGGTAAGGGTAGACCT+AGG | + | chr8.4:72554900-72554919 | MS.gene25107:intron | 50.0% | |
| CTCTCTGCTTGGACACTCAT+GGG | + | chr8.4:72557266-72557285 | MS.gene25107:CDS | 50.0% | |
| CTGAATGCAGCTTCGCTAGT+TGG | - | chr8.4:72557595-72557614 | None:intergenic | 50.0% | |
| CTGGCTGTTGCCTTCAAAGT+TGG | + | chr8.4:72555490-72555509 | MS.gene25107:intron | 50.0% | |
| GAAAAATACTCCTGCCGCTG+TGG | + | chr8.4:72557307-72557326 | MS.gene25107:CDS | 50.0% | |
| GAATTGTGTGGCAACCGTCA+TGG | - | chr8.4:72554707-72554726 | None:intergenic | 50.0% | |
| GACGGTTGCCACACAATTCT+GGG | + | chr8.4:72554708-72554727 | MS.gene25107:intron | 50.0% | |
| GAGGACTGATCCTTACAGAG+TGG | + | chr8.4:72557043-72557062 | MS.gene25107:CDS | 50.0% | |
| GATTGCCGGTGTTTCGTATG+TGG | + | chr8.4:72552463-72552482 | MS.gene25107:CDS | 50.0% | |
| GCTTTGTACTTCCTACAGGC+CGG | + | chr8.4:72556531-72556550 | MS.gene25107:intron | 50.0% | |
| GGAGAGTAGATCAGATGGAG+GGG | + | chr8.4:72554867-72554886 | MS.gene25107:intron | 50.0% | |
| GTATGTGGCTACTCCGGTTA+TGG | + | chr8.4:72552478-72552497 | MS.gene25107:CDS | 50.0% | |
| GTCCATGCATTCCAGTTCCA+AGG | - | chr8.4:72556777-72556796 | None:intergenic | 50.0% | |
| TCTCTCTGCTTGGACACTCA+TGG | + | chr8.4:72557265-72557284 | MS.gene25107:CDS | 50.0% | |
| TGACGGTTGCCACACAATTC+TGG | + | chr8.4:72554707-72554726 | MS.gene25107:intron | 50.0% | |
| TGTAGCCGACCTCACTTAGT+AGG | + | chr8.4:72555018-72555037 | MS.gene25107:intron | 50.0% | |
| TTATGTGAAGGTAGCGCCAG+AGG | + | chr8.4:72554312-72554331 | MS.gene25107:intron | 50.0% | |
| TTTGGCACGCACAGTTCTTG+TGG | + | chr8.4:72556734-72556753 | MS.gene25107:CDS | 50.0% | |
| ! | ACACCCTGCTATCCCAGTTT+TGG | - | chr8.4:72554521-72554540 | None:intergenic | 50.0% |
| ! | ACCCTGCTATCCCAGTTTTG+GGG | - | chr8.4:72554519-72554538 | None:intergenic | 50.0% |
| ! | CACCCTGCTATCCCAGTTTT+GGG | - | chr8.4:72554520-72554539 | None:intergenic | 50.0% |
| ! | CCAACAACAACACCGATTGC+CGG | + | chr8.4:72552449-72552468 | MS.gene25107:CDS | 50.0% |
| ! | GATAGAACTTGACGGACCTC+TGG | + | chr8.4:72556578-72556597 | MS.gene25107:CDS | 50.0% |
| ! | GTCTGTGTCGGTGTAAGAGA+GGG | - | chr8.4:72552161-72552180 | None:intergenic | 50.0% |
| ! | TGTCTGTGTCGGTGTAAGAG+AGG | - | chr8.4:72552162-72552181 | None:intergenic | 50.0% |
| !! | CAAGAGTGCCCTTAGGACAT+TGG | + | chr8.4:72553815-72553834 | MS.gene25107:intron | 50.0% |
| !!! | AGCAGCGTTTTGGAGAGCTT+AGG | + | chr8.4:72554195-72554214 | MS.gene25107:intron | 50.0% |
| ACAACACGCTGCCGCTCTAA+CGG | + | chr8.4:72554759-72554778 | MS.gene25107:intron | 55.0% | |
| ACTGGGATAGCAGGGTGTGA+TGG | + | chr8.4:72554523-72554542 | MS.gene25107:intron | 55.0% | |
| AGAGCGGTCAACCCCAAAAC+TGG | + | chr8.4:72554505-72554524 | MS.gene25107:intron | 55.0% | |
| AGGGCAGCAGAGCAATTGGT+AGG | + | chr8.4:72552329-72552348 | MS.gene25107:intron | 55.0% | |
| ATGCAGGGCAGCAGAGCAAT+TGG | + | chr8.4:72552325-72552344 | MS.gene25107:intron | 55.0% | |
| CCAGCTTCGCATGCTCGATA+AGG | + | chr8.4:72557511-72557530 | MS.gene25107:CDS | 55.0% | |
| CCTTATCGAGCATGCGAAGC+TGG | - | chr8.4:72557514-72557533 | None:intergenic | 55.0% | |
| CGGCTAGAACCTGCTTAAGC+TGG | + | chr8.4:72553507-72553526 | MS.gene25107:intron | 55.0% | |
| CTGCTGCCCTGCATTAAGGA+AGG | - | chr8.4:72552319-72552338 | None:intergenic | 55.0% | |
| GACGGACCTCACATGGTTGA+GGG | + | chr8.4:72557686-72557705 | MS.gene25107:CDS | 55.0% | |
| GAGCGGTCAACCCCAAAACT+GGG | + | chr8.4:72554506-72554525 | MS.gene25107:intron | 55.0% | |
| GAGGGGAGTCAGATCACTAG+AGG | + | chr8.4:72554884-72554903 | MS.gene25107:intron | 55.0% | |
| GCGAAGCTGCATTCAGAGCT+CGG | + | chr8.4:72557599-72557618 | MS.gene25107:CDS | 55.0% | |
| GGCCGGAGAAAAGCGAAAAG+AGG | + | chr8.4:72556548-72556567 | MS.gene25107:intron | 55.0% | |
| GGCTACTCCGGTTATGGAAG+AGG | + | chr8.4:72552484-72552503 | MS.gene25107:CDS | 55.0% | |
| GTCAGTCCTGGATAGCAGAG+CGG | + | chr8.4:72554489-72554508 | MS.gene25107:intron | 55.0% | |
| TGCTCTGCTGCCCTGCATTA+AGG | - | chr8.4:72552323-72552342 | None:intergenic | 55.0% | |
| TGGGTTGCTACAGCGAGTGT+GGG | + | chr8.4:72554727-72554746 | MS.gene25107:intron | 55.0% | |
| ! | GGTGTGTACGTTGTGCCGAT+GGG | + | chr8.4:72554239-72554258 | MS.gene25107:intron | 55.0% |
| ! | TGAGCTCTGGCGCATGCTAA+TGG | + | chr8.4:72556390-72556409 | MS.gene25107:intron | 55.0% |
| !! | CAGTGTCGACGTGTCTGTGT+CGG | - | chr8.4:72552173-72552192 | None:intergenic | 55.0% |
| !! | CCGGCAATCGGTGTTGTTGT+TGG | - | chr8.4:72552452-72552471 | None:intergenic | 55.0% |
| !! | TTCGCTTTTCTCCGGCCTGT+AGG | - | chr8.4:72556545-72556564 | None:intergenic | 55.0% |
| AGAGAGGGACGGACCTCACA+TGG | + | chr8.4:72557679-72557698 | MS.gene25107:CDS | 60.0% | |
| CCGACGATAGGCATCCACAG+CGG | - | chr8.4:72557324-72557343 | None:intergenic | 60.0% | |
| CCGCTGTGGATGCCTATCGT+CGG | + | chr8.4:72557321-72557340 | MS.gene25107:CDS | 60.0% | |
| CGCTGTGGATGCCTATCGTC+GGG | + | chr8.4:72557322-72557341 | MS.gene25107:CDS | 60.0% | |
| CTGGGTTGCTACAGCGAGTG+TGG | + | chr8.4:72554726-72554745 | MS.gene25107:intron | 60.0% | |
| GCCCTGAACAAGTGCCCTCA+GGG | + | chr8.4:72553957-72553976 | MS.gene25107:intron | 60.0% | |
| GGACGGACCTCACATGGTTG+AGG | + | chr8.4:72557685-72557704 | MS.gene25107:CDS | 60.0% | |
| GGCAACTAGCGCCGTTAGAG+CGG | - | chr8.4:72554773-72554792 | None:intergenic | 60.0% | |
| GGGTGTGTACGTTGTGCCGA+TGG | + | chr8.4:72554238-72554257 | MS.gene25107:intron | 60.0% | |
| GGGTTGCTACAGCGAGTGTG+GGG | + | chr8.4:72554728-72554747 | MS.gene25107:intron | 60.0% | |
| GGTTGACCGCTCTGCTATCC+AGG | - | chr8.4:72554498-72554517 | None:intergenic | 60.0% | |
| GGTTGCTACAGCGAGTGTGG+GGG | + | chr8.4:72554729-72554748 | MS.gene25107:intron | 60.0% | |
| GTGAAGGTAGCGCCAGAGGA+GGG | + | chr8.4:72554316-72554335 | MS.gene25107:intron | 60.0% | |
| TCCTGTGAACGCGGCCATGA+CGG | + | chr8.4:72554690-72554709 | MS.gene25107:intron | 60.0% | |
| TGCCCTGAACAAGTGCCCTC+AGG | + | chr8.4:72553956-72553975 | MS.gene25107:intron | 60.0% | |
| TGTGAAGGTAGCGCCAGAGG+AGG | + | chr8.4:72554315-72554334 | MS.gene25107:intron | 60.0% | |
| !! | GCCCTGAGGGCACTTGTTCA+GGG | - | chr8.4:72553961-72553980 | None:intergenic | 60.0% |
| !! | TGCCCTGAGGGCACTTGTTC+AGG | - | chr8.4:72553962-72553981 | None:intergenic | 60.0% |
| ACCGTCATGGCCGCGTTCAC+AGG | - | chr8.4:72554694-72554713 | None:intergenic | 65.0% | |
| AGAGCTCGGACGCCCTGAAG+AGG | + | chr8.4:72557613-72557632 | MS.gene25107:CDS | 65.0% | |
| CGATAGGCATCCACAGCGGC+AGG | - | chr8.4:72557320-72557339 | None:intergenic | 65.0% | |
| TGCTACAGCGAGTGTGGGGG+CGG | + | chr8.4:72554732-72554751 | MS.gene25107:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 72552035 | 72557986 | 72552035 | ID=MS.gene25107 |
| chr8.4 | mRNA | 72552035 | 72557986 | 72552035 | ID=MS.gene25107.t1;Parent=MS.gene25107 |
| chr8.4 | exon | 72552035 | 72552120 | 72552035 | ID=MS.gene25107.t1.exon1;Parent=MS.gene25107.t1 |
| chr8.4 | CDS | 72552035 | 72552120 | 72552035 | ID=cds.MS.gene25107.t1;Parent=MS.gene25107.t1 |
| chr8.4 | exon | 72552331 | 72552643 | 72552331 | ID=MS.gene25107.t1.exon2;Parent=MS.gene25107.t1 |
| chr8.4 | CDS | 72552331 | 72552643 | 72552331 | ID=cds.MS.gene25107.t1;Parent=MS.gene25107.t1 |
| chr8.4 | exon | 72556549 | 72557799 | 72556549 | ID=MS.gene25107.t1.exon3;Parent=MS.gene25107.t1 |
| chr8.4 | CDS | 72556549 | 72557799 | 72556549 | ID=cds.MS.gene25107.t1;Parent=MS.gene25107.t1 |
| chr8.4 | exon | 72557903 | 72557986 | 72557903 | ID=MS.gene25107.t1.exon4;Parent=MS.gene25107.t1 |
| chr8.4 | CDS | 72557903 | 72557986 | 72557903 | ID=cds.MS.gene25107.t1;Parent=MS.gene25107.t1 |
| Gene Sequence |
| Protein sequence |
