Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80048.t1 | XP_013469843.1 | 98.8 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 2.00E-267 | 931.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80048.t1 | Q9STS3 | 75.1 | 579 | 141 | 3 | 1 | 577 | 1 | 578 | 1.4e-200 | 700.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80048.t1 | A0A072VQG1 | 98.8 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 1.5e-267 | 931.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80048 | MS.gene48038 | PPI |
| MS.gene80048 | MS.gene96778 | PPI |
| MS.gene80048 | MS.gene43131 | PPI |
| MS.gene80048 | MS.gene56523 | PPI |
| MS.gene80048 | MS.gene93598 | PPI |
| MS.gene80048 | MS.gene032323 | PPI |
| MS.gene80048 | MS.gene56142 | PPI |
| MS.gene022091 | MS.gene80048 | PPI |
| MS.gene80048 | MS.gene43188 | PPI |
| MS.gene80048 | MS.gene97314 | PPI |
| MS.gene80048 | MS.gene40797 | PPI |
| MS.gene80048 | MS.gene057101 | PPI |
| MS.gene80048 | MS.gene93612 | PPI |
| MS.gene80048 | MS.gene007855 | PPI |
| MS.gene80048 | MS.gene031482 | PPI |
| MS.gene005307 | MS.gene80048 | PPI |
| MS.gene80048 | MS.gene32240 | PPI |
| MS.gene038286 | MS.gene80048 | PPI |
| MS.gene80048 | MS.gene95446 | PPI |
| MS.gene80048 | MS.gene44181 | PPI |
| MS.gene006802 | MS.gene80048 | PPI |
| MS.gene80048 | MS.gene38996 | PPI |
| MS.gene80048 | MS.gene017070 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80048.t1 | MTR_1g103750 | 98.789 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1190 |
| MS.gene80048.t1 | MTR_8g021140 | 86.701 | 579 | 72 | 4 | 1 | 577 | 1 | 576 | 0.0 | 1046 |
| MS.gene80048.t1 | MTR_8g447330 | 46.118 | 425 | 123 | 14 | 1 | 366 | 1 | 378 | 4.33e-97 | 301 |
| MS.gene80048.t1 | MTR_8g447330 | 74.737 | 95 | 24 | 0 | 410 | 504 | 284 | 378 | 6.59e-43 | 158 |
| MS.gene80048.t1 | MTR_6g016680 | 28.070 | 342 | 230 | 4 | 213 | 554 | 411 | 736 | 3.54e-29 | 123 |
| MS.gene80048.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 358 | 649 | 8.46e-28 | 118 |
| MS.gene80048.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 372 | 663 | 1.07e-27 | 118 |
| MS.gene80048.t1 | MTR_2g019850 | 25.095 | 263 | 194 | 3 | 233 | 495 | 211 | 470 | 1.10e-13 | 74.3 |
| MS.gene80048.t1 | MTR_1g079510 | 24.590 | 305 | 179 | 6 | 281 | 547 | 107 | 398 | 8.57e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80048.t1 | AT3G48150 | 74.093 | 579 | 147 | 3 | 1 | 577 | 1 | 578 | 0.0 | 915 |
| MS.gene80048.t1 | AT3G48150 | 74.624 | 465 | 117 | 1 | 114 | 577 | 1 | 465 | 0.0 | 748 |
| MS.gene80048.t1 | AT2G20000 | 27.907 | 301 | 208 | 2 | 254 | 554 | 434 | 725 | 6.79e-28 | 119 |
| MS.gene80048.t1 | AT3G16320 | 27.500 | 320 | 215 | 4 | 241 | 555 | 390 | 697 | 6.62e-25 | 110 |
| MS.gene80048.t1 | AT3G16320 | 27.500 | 320 | 215 | 4 | 241 | 555 | 401 | 708 | 7.38e-25 | 109 |
| MS.gene80048.t1 | AT2G20000 | 33.155 | 187 | 125 | 0 | 254 | 440 | 434 | 620 | 1.39e-24 | 108 |
| MS.gene80048.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 401 | 544 | 1.06e-15 | 80.9 |
| MS.gene80048.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 390 | 533 | 1.11e-15 | 80.5 |
Find 112 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 1.1:-74621011 | MS.gene80048:CDS |
| TCTCTCTGCTTGGACACTTA+TGG | 0.199975 | 1.1:-74620910 | MS.gene80048:CDS |
| TGGGAATTATTACAGTTTAA+AGG | 0.204204 | 1.1:-74620991 | MS.gene80048:CDS |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 1.1:-74621010 | MS.gene80048:CDS |
| CTCTCTGCTTGGACACTTAT+GGG | 0.273049 | 1.1:-74620909 | MS.gene80048:CDS |
| TATCAGTCATGAATACTCTA+TGG | 0.285092 | 1.1:+74621042 | None:intergenic |
| GGGAATTATTACAGTTTAAA+GGG | 0.286813 | 1.1:-74620990 | MS.gene80048:CDS |
| GAATATTTACTCGGAACTTT+TGG | 0.289586 | 1.1:-74621245 | MS.gene80048:CDS |
| ACAGAAAGGCAATGATAATT+TGG | 0.300674 | 1.1:-74621459 | MS.gene80048:CDS |
| AAGATCTTATGCTCTCTATC+TGG | 0.346201 | 1.1:-74623747 | MS.gene80048:intron |
| CAAATTCTTTCAAACTGTAC+TGG | 0.353720 | 1.1:+74621186 | None:intergenic |
| ACAATGACGACGCCGATTGC+AGG | 0.355344 | 1.1:-74623920 | MS.gene80048:CDS |
| ACTTCGTCCTCCTCCATAAC+TGG | 0.358954 | 1.1:+74623878 | None:intergenic |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 1.1:+74621011 | None:intergenic |
| GATGATAGAACTTGAGGGTC+TGG | 0.368699 | 1.1:-74621597 | MS.gene80048:CDS |
| ATCCACAGTCGGGAATCATT+TGG | 0.376499 | 1.1:+74620714 | None:intergenic |
| AAGTAATGAAGCGCGTATAA+AGG | 0.384843 | 1.1:+74620759 | None:intergenic |
| CCTCATCGAGCTTGCGAAGC+TGG | 0.400023 | 1.1:+74620664 | None:intergenic |
| GTATGTCGCTACGCCAGTTA+TGG | 0.402332 | 1.1:-74623891 | MS.gene80048:CDS |
| GCAAAGCTGCATTCAGAGTT+GGG | 0.408786 | 1.1:-74620576 | MS.gene80048:CDS |
| TGTGATTATCGTGCTTTGTA+TGG | 0.409421 | 1.1:-74620813 | MS.gene80048:CDS |
| ATGCAGGGCGGCGGAGCAAT+TGG | 0.413245 | 1.1:-74624044 | MS.gene80048:intron |
| TCCACAGTCGGGAATCATTT+GGG | 0.420700 | 1.1:+74620715 | None:intergenic |
| ACCATATAAGTACAAACAAA+AGG | 0.420898 | 1.1:+74621493 | None:intergenic |
| GAGGATGGAATCTGAAGAGA+GGG | 0.426699 | 1.1:-74620511 | MS.gene80048:CDS |
| TAAAAGTGATGCTGTGAATC+AGG | 0.432981 | 1.1:-74621573 | MS.gene80048:CDS |
| CATGTTCTACGGGATCAAAT+TGG | 0.433240 | 1.1:-74623788 | MS.gene80048:CDS |
| AATATCAACTGAAGTGCATA+AGG | 0.439777 | 1.1:+74621367 | None:intergenic |
| GTCTCTATTCCGCTTCCAAA+TGG | 0.440463 | 1.1:-74624165 | MS.gene80048:intron |
| TGCAAAGCTGCATTCAGAGT+TGG | 0.452965 | 1.1:-74620577 | MS.gene80048:CDS |
| TGATGCTGTGAATCAGGAAT+TGG | 0.453070 | 1.1:-74621567 | MS.gene80048:CDS |
| GTCTTAATGTCAGTAGTCAT+TGG | 0.455741 | 1.1:-74621337 | MS.gene80048:CDS |
| ACCCTTGGAACTGGAATGCC+TGG | 0.456175 | 1.1:-74621403 | MS.gene80048:CDS |
| TAGATAGCTACCCTTGGAAC+TGG | 0.468316 | 1.1:-74621412 | MS.gene80048:CDS |
| AGGAATTGGTTTCTTTAGAG+AGG | 0.470455 | 1.1:-74621553 | MS.gene80048:CDS |
| AGGGCATCAAACTGTGATGA+TGG | 0.471291 | 1.1:-74620624 | MS.gene80048:CDS |
| GGGCTTTAGCAATTTGAGCT+TGG | 0.481121 | 1.1:+74621207 | None:intergenic |
| AGCAAAGCCTCAATCATGTT+AGG | 0.482273 | 1.1:+74620483 | None:intergenic |
| TTGTCTACACTCCGCAAGAA+TGG | 0.490832 | 1.1:-74621527 | MS.gene80048:CDS |
| AGAGAGCTGCTCATGTTCTA+CGG | 0.491336 | 1.1:-74623799 | MS.gene80048:CDS |
| GAGCAGCTCTCTTATATTCA+CGG | 0.492543 | 1.1:+74623810 | None:intergenic |
| GAGGAGGACGAAGTTGTTGA+TGG | 0.493850 | 1.1:-74623869 | MS.gene80048:CDS |
| CAGAAAGGATTTAGAGAGGA+TGG | 0.495031 | 1.1:-74620526 | MS.gene80048:CDS |
| CTGCTGTGAATGCCTATCGT+CGG | 0.496961 | 1.1:-74620854 | MS.gene80048:CDS |
| ACACGTCTTCTCGATTATAC+TGG | 0.497476 | 1.1:-74620402 | MS.gene80048:CDS |
| AGAGGATGGAATCTGAAGAG+AGG | 0.500780 | 1.1:-74620512 | MS.gene80048:CDS |
| TCCATGTCTTCCACTCTGTA+AGG | 0.501402 | 1.1:+74621122 | None:intergenic |
| TGCTGTGAATGCCTATCGTC+GGG | 0.506475 | 1.1:-74620853 | MS.gene80048:CDS |
| CTCCAATGTGCTTTATGCTA+AGG | 0.506539 | 1.1:-74621093 | MS.gene80048:CDS |
| AAATTCTTTCAAACTGTACT+GGG | 0.511198 | 1.1:+74621187 | None:intergenic |
| GAAGAGATGATAGAACTTGA+GGG | 0.512391 | 1.1:-74621602 | MS.gene80048:CDS |
| GGAAGAGATGATAGAACTTG+AGG | 0.513786 | 1.1:-74621603 | MS.gene80048:CDS |
| TGTCAGTAGTCATTGGATGA+AGG | 0.516391 | 1.1:-74621330 | MS.gene80048:CDS |
| ATGATAGAACTTGAGGGTCT+GGG | 0.520445 | 1.1:-74621596 | MS.gene80048:CDS |
| TGGACTAGGACAAGCTTATG+AGG | 0.520816 | 1.1:-74620793 | MS.gene80048:CDS |
| GGGCATCAAACTGTGATGAT+GGG | 0.526275 | 1.1:-74620623 | MS.gene80048:CDS |
| GAGAGCTGCTCATGTTCTAC+GGG | 0.527349 | 1.1:-74623798 | MS.gene80048:CDS |
| TAAGGATTGCAGCTCAGTCC+AGG | 0.528177 | 1.1:+74621385 | None:intergenic |
| TTCGAAGGCGTGAATTTCGA+TGG | 0.532573 | 1.1:+74624001 | None:intergenic |
| AGCCATTGCTATCCACAGTC+GGG | 0.535467 | 1.1:+74620704 | None:intergenic |
| TTTGGCGCGTACAGTTCTTG+TGG | 0.535552 | 1.1:-74621441 | MS.gene80048:CDS |
| CGATAGGCATTCACAGCAGC+GGG | 0.537165 | 1.1:+74620858 | None:intergenic |
| CCATATAAGTACAAACAAAA+GGG | 0.545143 | 1.1:+74621494 | None:intergenic |
| GTCCAGGCATTCCAGTTCCA+AGG | 0.545231 | 1.1:+74621401 | None:intergenic |
| GGAAAGTGCTCAACATCCGC+TGG | 0.547287 | 1.1:+74620201 | None:intergenic |
| GGAATTGGTTTCTTTAGAGA+GGG | 0.550127 | 1.1:-74621552 | MS.gene80048:CDS |
| GATCAATTGTTCCATTCTTG+CGG | 0.552254 | 1.1:+74621516 | None:intergenic |
| TATCGTGCTTTGTATGGACT+AGG | 0.552484 | 1.1:-74620807 | MS.gene80048:CDS |
| TGAAATATACCATTTGGAAG+CGG | 0.554816 | 1.1:+74624156 | None:intergenic |
| ACATACGAAACACCTGCAAT+CGG | 0.559093 | 1.1:+74623908 | None:intergenic |
| GGCAGGAGAAAAGCGAAAAG+AGG | 0.563435 | 1.1:-74621624 | MS.gene80048:CDS |
| GCAGAAGCAGATGAGTTCAA+AGG | 0.564871 | 1.1:-74624239 | None:intergenic |
| ATCAGTCATGAATACTCTAT+GGG | 0.566494 | 1.1:+74621043 | None:intergenic |
| ACTCTGAATGCAGCTTTGCA+AGG | 0.569872 | 1.1:+74620580 | None:intergenic |
| AAGAAGAACTGAAGAAGCAG+AGG | 0.572030 | 1.1:-74620433 | MS.gene80048:CDS |
| GGAATTATTACAGTTTAAAG+GGG | 0.578878 | 1.1:-74620989 | MS.gene80048:CDS |
| GGTCTTATACTGAAACAGAA+AGG | 0.579233 | 1.1:-74621473 | MS.gene80048:CDS |
| AATCTGTAGATAGCTACCCT+TGG | 0.580032 | 1.1:-74621418 | MS.gene80048:CDS |
| TATTTCAACAGCCCGACGAT+AGG | 0.582252 | 1.1:+74620842 | None:intergenic |
| AGAGTTGGGACGCACTGAAG+AGG | 0.583415 | 1.1:-74620562 | MS.gene80048:CDS |
| GAGCCATTGCTATCCACAGT+CGG | 0.589081 | 1.1:+74620703 | None:intergenic |
| TCAAAATATGAATATTTACT+CGG | 0.590894 | 1.1:-74621254 | MS.gene80048:CDS |
| TCCTTACAGAGTGGAAGACA+TGG | 0.592201 | 1.1:-74621123 | MS.gene80048:CDS |
| TTCCTTAGCATAAAGCACAT+TGG | 0.592234 | 1.1:+74621091 | None:intergenic |
| AGGCAATAAAGTGTTACAGA+AGG | 0.600848 | 1.1:-74620644 | MS.gene80048:CDS |
| TGTCGCTACGCCAGTTATGG+AGG | 0.602206 | 1.1:-74623888 | MS.gene80048:CDS |
| AGGGCGGCGGAGCAATTGGT+AGG | 0.602481 | 1.1:-74624040 | MS.gene80048:CDS |
| TTGATGAAAATGCAGGGCGG+CGG | 0.604789 | 1.1:-74624053 | MS.gene80048:intron |
| CGCTACGCCAGTTATGGAGG+AGG | 0.605303 | 1.1:-74623885 | MS.gene80048:CDS |
| GGCAATAAAGTGTTACAGAA+GGG | 0.606652 | 1.1:-74620643 | MS.gene80048:CDS |
| GGAAGGACCTAACATGATTG+AGG | 0.608692 | 1.1:-74620490 | MS.gene80048:CDS |
| TCCAGGCATTCCAGTTCCAA+GGG | 0.610042 | 1.1:+74621402 | None:intergenic |
| GGCATCAAACTGTGATGATG+GGG | 0.611034 | 1.1:-74620622 | MS.gene80048:CDS |
| AAGTGCTCAACATCCGCTGG+AGG | 0.612692 | 1.1:+74620204 | None:intergenic |
| ACTACAGAAAGGATTTAGAG+AGG | 0.616904 | 1.1:-74620530 | MS.gene80048:CDS |
| TTCCCGACTGTGGATAGCAA+TGG | 0.623157 | 1.1:-74620706 | MS.gene80048:CDS |
| TCATGAATACTCTATGGGCA+AGG | 0.627413 | 1.1:+74621048 | None:intergenic |
| AGTGCTCAACATCCGCTGGA+GGG | 0.630408 | 1.1:+74620205 | None:intergenic |
| CGTTGAAACCTCGTATTCGA+AGG | 0.633904 | 1.1:+74623986 | None:intergenic |
| ACAATCTAGTTTCCCTCCAG+CGG | 0.634292 | 1.1:-74620217 | MS.gene80048:CDS |
| TACAAAGCACGATAATCACA+CGG | 0.635868 | 1.1:+74620816 | None:intergenic |
| CTATATTTGAAGAACTGCTG+AGG | 0.641049 | 1.1:-74621151 | MS.gene80048:CDS |
| AATTCACGCCTTCGAATACG+AGG | 0.641925 | 1.1:-74623994 | MS.gene80048:CDS |
| GTGGAAGTTCAAGTATTCGT+CGG | 0.649300 | 1.1:-74623964 | MS.gene80048:CDS |
| CCAGCTTCGCAAGCTCGATG+AGG | 0.649439 | 1.1:-74620664 | MS.gene80048:CDS |
| ATGGAATCTGAAGAGAGGGA+AGG | 0.651788 | 1.1:-74620507 | MS.gene80048:CDS |
| ACGATAGGCATTCACAGCAG+CGG | 0.679646 | 1.1:+74620857 | None:intergenic |
| GAGGATTGATCCTTACAGAG+TGG | 0.688847 | 1.1:-74621132 | MS.gene80048:CDS |
| ACCCAAATGATTCCCGACTG+TGG | 0.691891 | 1.1:-74620716 | MS.gene80048:CDS |
| TGCTTCAAAAGACATTATGG+AGG | 0.698314 | 1.1:+74620180 | None:intergenic |
| ACAAAGCACGATAATCACAC+GGG | 0.717331 | 1.1:+74620817 | None:intergenic |
| TCGAATACGAGGTTTCAACG+TGG | 0.774191 | 1.1:-74623983 | MS.gene80048:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTGATTATTAAATGATT+TGG | + | chr1.1:74624131-74624150 | None:intergenic | 15.0% |
| !! | TACTAATAAACTATAATTAC+TGG | - | chr1.1:74621363-74621382 | MS.gene80048:CDS | 15.0% |
| !! | TCAAAATATGAATATTTACT+CGG | - | chr1.1:74623169-74623188 | MS.gene80048:intron | 15.0% |
| !! | TTTCAAAAATAACTAAAAAG+CGG | + | chr1.1:74622286-74622305 | None:intergenic | 15.0% |
| !!! | AAAAAAAATCTTTTCGAAAA+GGG | + | chr1.1:74622490-74622509 | None:intergenic | 15.0% |
| !!! | CTATTAACATTTTGTTTAAA+AGG | - | chr1.1:74622013-74622032 | MS.gene80048:intron | 15.0% |
| !!! | CTTTTAAACAAAATGTTAAT+AGG | + | chr1.1:74622015-74622034 | None:intergenic | 15.0% |
| !!! | TATAAGAAATACCAATTTTA+AGG | + | chr1.1:74621985-74622004 | None:intergenic | 15.0% |
| !! | AAACGTTACTTGATATATTT+AGG | - | chr1.1:74621323-74621342 | MS.gene80048:CDS | 20.0% |
| !! | AAGGAATAGATATTTAGATT+AGG | + | chr1.1:74620306-74620325 | None:intergenic | 20.0% |
| !! | AGGAATAGATATTTAGATTA+GGG | + | chr1.1:74620305-74620324 | None:intergenic | 20.0% |
| !! | GAGATTACAAAAATATATTC+AGG | - | chr1.1:74622247-74622266 | MS.gene80048:intron | 20.0% |
| !! | TCAAATCAAATAAAAGAGAA+TGG | + | chr1.1:74621665-74621684 | None:intergenic | 20.0% |
| !!! | ATAATTTTTGTCCAGTTTAA+GGG | + | chr1.1:74623494-74623513 | None:intergenic | 20.0% |
| !!! | GAAAAAAAATCTTTTCGAAA+AGG | + | chr1.1:74622491-74622510 | None:intergenic | 20.0% |
| !!! | GAAATTATTTTTACCAACAT+TGG | - | chr1.1:74620739-74620758 | MS.gene80048:CDS | 20.0% |
| !!! | GTTAAATATTTTTTACTCAC+AGG | + | chr1.1:74624048-74624067 | None:intergenic | 20.0% |
| !!! | TACTTTCCAAGTTTTATTTA+CGG | + | chr1.1:74622152-74622171 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTGATTTGAGTT+GGG | - | chr1.1:74621668-74621687 | MS.gene80048:intron | 20.0% |
| !!! | TTTGCATTTTCTGTTTATAT+GGG | - | chr1.1:74620985-74621004 | MS.gene80048:CDS | 20.0% |
| !!! | TTTTATAATGTCAAATGCAT+TGG | - | chr1.1:74620915-74620934 | MS.gene80048:CDS | 20.0% |
| ! | AAAGCATATGTTGTCAATAA+TGG | + | chr1.1:74621529-74621548 | None:intergenic | 25.0% |
| ! | AAATTCTTTCAAACTGTACT+GGG | + | chr1.1:74623239-74623258 | None:intergenic | 25.0% |
| ! | AATTCCTATAATTGTTGAAG+TGG | - | chr1.1:74621578-74621597 | MS.gene80048:CDS | 25.0% |
| ! | ACCATATAAGTACAAACAAA+AGG | + | chr1.1:74622933-74622952 | None:intergenic | 25.0% |
| ! | ACTTTGATGTAGTAGTATTA+TGG | - | chr1.1:74620958-74620977 | MS.gene80048:CDS | 25.0% |
| ! | AGAAAAAGTGAGAAGTTAAA+TGG | + | chr1.1:74622587-74622606 | None:intergenic | 25.0% |
| ! | ATAATCAAAGTCATTCTTTC+AGG | - | chr1.1:74624140-74624159 | MS.gene80048:intron | 25.0% |
| ! | ATGACTAATAATAGCATAAG+AGG | + | chr1.1:74622553-74622572 | None:intergenic | 25.0% |
| ! | ATTCCTATAATTGTTGAAGT+GGG | - | chr1.1:74621579-74621598 | MS.gene80048:CDS | 25.0% |
| ! | CACTAATCAGATTTAAAAGA+TGG | + | chr1.1:74621859-74621878 | None:intergenic | 25.0% |
| ! | CCATATAAGTACAAACAAAA+GGG | + | chr1.1:74622932-74622951 | None:intergenic | 25.0% |
| ! | CTAAATGAAGATAATCCATT+GGG | - | chr1.1:74622617-74622636 | MS.gene80048:intron | 25.0% |
| ! | GGAATTATTACAGTTTAAAG+GGG | - | chr1.1:74623434-74623453 | MS.gene80048:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+GGG | - | chr1.1:74623433-74623452 | MS.gene80048:intron | 25.0% |
| ! | GTAAATAAAACTTGGAAAGT+AGG | - | chr1.1:74622151-74622170 | MS.gene80048:intron | 25.0% |
| ! | TACGTTATAAACGAAATTGT+TGG | - | chr1.1:74620881-74620900 | MS.gene80048:CDS | 25.0% |
| ! | TCTAAATGAAGATAATCCAT+TGG | - | chr1.1:74622616-74622635 | MS.gene80048:intron | 25.0% |
| ! | TGGGAATTATTACAGTTTAA+AGG | - | chr1.1:74623432-74623451 | MS.gene80048:intron | 25.0% |
| ! | TTAACTCCTTAAATAGATCT+CGG | - | chr1.1:74620836-74620855 | MS.gene80048:CDS | 25.0% |
| !! | ATTTTGTTGAGTTCCATTTT+GGG | - | chr1.1:74621217-74621236 | MS.gene80048:CDS | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | - | chr1.1:74623413-74623432 | MS.gene80048:intron | 25.0% |
| !! | GAAGTTTGAAATATACCATT+TGG | + | chr1.1:74620276-74620295 | None:intergenic | 25.0% |
| !! | GATAATTTTTGTCCAGTTTA+AGG | + | chr1.1:74623495-74623514 | None:intergenic | 25.0% |
| !! | GTGTTTACTTCAATTTTTGT+GGG | - | chr1.1:74621128-74621147 | MS.gene80048:CDS | 25.0% |
| !! | GTTTGCATTTTCTGTTTATA+TGG | - | chr1.1:74620984-74621003 | MS.gene80048:CDS | 25.0% |
| !! | TGTGTTTACTTCAATTTTTG+TGG | - | chr1.1:74621127-74621146 | MS.gene80048:CDS | 25.0% |
| !!! | ATTTGAATTTGATTTCTAGC+TGG | - | chr1.1:74620783-74620802 | MS.gene80048:CDS | 25.0% |
| !!! | CTCTTTTATTTGATTTGAGT+TGG | - | chr1.1:74621667-74621686 | MS.gene80048:intron | 25.0% |
| !!! | TATGACCTTCTTTATTTTGA+AGG | + | chr1.1:74621835-74621854 | None:intergenic | 25.0% |
| !!! | TGAAAGAACTGAGTTTTTTT+GGG | - | chr1.1:74622723-74622742 | MS.gene80048:intron | 25.0% |
| !!! | TGATGGTGATTTTTATCTTT+TGG | - | chr1.1:74620571-74620590 | MS.gene80048:CDS | 25.0% |
| !!! | TTGAAAGAACTGAGTTTTTT+TGG | - | chr1.1:74622722-74622741 | MS.gene80048:intron | 25.0% |
| AATATCAACTGAAGTGCATA+AGG | + | chr1.1:74623059-74623078 | None:intergenic | 30.0% | |
| ACAAAAATTATCTCTCTGCT+TGG | - | chr1.1:74623503-74623522 | MS.gene80048:intron | 30.0% | |
| ACAATGTACTAATCCAATGT+TGG | + | chr1.1:74620755-74620774 | None:intergenic | 30.0% | |
| ACAGAAAGGCAATGATAATT+TGG | - | chr1.1:74622964-74622983 | MS.gene80048:intron | 30.0% | |
| ATATTACACACACAACTTCA+TGG | + | chr1.1:74622050-74622069 | None:intergenic | 30.0% | |
| ATCAGTCATGAATACTCTAT+GGG | + | chr1.1:74623383-74623402 | None:intergenic | 30.0% | |
| CAAATTCTTTCAAACTGTAC+TGG | + | chr1.1:74623240-74623259 | None:intergenic | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | + | chr1.1:74623415-74623434 | None:intergenic | 30.0% | |
| TAACTCCTTAAATAGATCTC+GGG | - | chr1.1:74620837-74620856 | MS.gene80048:CDS | 30.0% | |
| TATCAGTCATGAATACTCTA+TGG | + | chr1.1:74623384-74623403 | None:intergenic | 30.0% | |
| TCTTAAAAACATTCTGCTTC+AGG | + | chr1.1:74622223-74622242 | None:intergenic | 30.0% | |
| TGAAATATACCATTTGGAAG+CGG | + | chr1.1:74620270-74620289 | None:intergenic | 30.0% | |
| TGGAAAAACATATGTTGTGA+GGG | - | chr1.1:74620812-74620831 | MS.gene80048:CDS | 30.0% | |
| TGGAGTTCTTATGTTTATTG+TGG | - | chr1.1:74620935-74620954 | MS.gene80048:CDS | 30.0% | |
| TTAAATCTGATTAGTGCTGT+TGG | - | chr1.1:74621863-74621882 | MS.gene80048:intron | 30.0% | |
| TTCCTATAATTGTTGAAGTG+GGG | - | chr1.1:74621580-74621599 | MS.gene80048:CDS | 30.0% | |
| TTGACAAAACTAACCATAAG+AGG | + | chr1.1:74622516-74622535 | None:intergenic | 30.0% | |
| TTGGAAAAACATATGTTGTG+AGG | - | chr1.1:74620811-74620830 | MS.gene80048:CDS | 30.0% | |
| ! | CCTGAATCTTGTTGTATTAT+TGG | - | chr1.1:74623412-74623431 | MS.gene80048:intron | 30.0% |
| ! | CGTTTTCCGTAAATAAAACT+TGG | - | chr1.1:74622143-74622162 | MS.gene80048:intron | 30.0% |
| ! | GAATATTTACTCGGAACTTT+TGG | - | chr1.1:74623178-74623197 | MS.gene80048:intron | 30.0% |
| ! | GATTTTGTTGAGTTCCATTT+TGG | - | chr1.1:74621216-74621235 | MS.gene80048:CDS | 30.0% |
| ! | TATATTCAGGTTAAAGCATG+AGG | - | chr1.1:74622260-74622279 | MS.gene80048:intron | 30.0% |
| ! | TTCGTATTGATGAAAATGCA+GGG | - | chr1.1:74620364-74620383 | MS.gene80048:intron | 30.0% |
| ! | TTTCGTATTGATGAAAATGC+AGG | - | chr1.1:74620363-74620382 | MS.gene80048:intron | 30.0% |
| ! | TTTTGTTGAGTTCCATTTTG+GGG | - | chr1.1:74621218-74621237 | MS.gene80048:CDS | 30.0% |
| !! | AACATTGGATTAGTACATTG+TGG | - | chr1.1:74620754-74620773 | MS.gene80048:CDS | 30.0% |
| !! | CATTATGCATCCTTAGTTTT+TGG | + | chr1.1:74623141-74623160 | None:intergenic | 30.0% |
| !! | CCCTTTTGTTTGTACTTATA+TGG | - | chr1.1:74622929-74622948 | MS.gene80048:intron | 30.0% |
| !!! | CCAGAGTTTTAACTTTTACT+GGG | + | chr1.1:74621951-74621970 | None:intergenic | 30.0% |
| !!! | GAAAGAACTGAGTTTTTTTG+GGG | - | chr1.1:74622724-74622743 | MS.gene80048:intron | 30.0% |
| !!! | GATTTTTTTTCTGCCTCTTA+TGG | - | chr1.1:74622500-74622519 | MS.gene80048:intron | 30.0% |
| AAAGTCATTCTTTCAGGAGA+CGG | - | chr1.1:74624146-74624165 | MS.gene80048:intron | 35.0% | |
| AAATGAAACGTCGTCGTTTA+AGG | + | chr1.1:74620346-74620365 | None:intergenic | 35.0% | |
| AACCCCACTTCAACAATTAT+AGG | + | chr1.1:74621585-74621604 | None:intergenic | 35.0% | |
| AAGATCTTATGCTCTCTATC+TGG | - | chr1.1:74620676-74620695 | MS.gene80048:CDS | 35.0% | |
| AAGTAATGAAGCGCGTATAA+AGG | + | chr1.1:74623667-74623686 | None:intergenic | 35.0% | |
| ACATCTTAGACTTGACATGA+GGG | + | chr1.1:74621752-74621771 | None:intergenic | 35.0% | |
| ACTACAGAAAGGATTTAGAG+AGG | - | chr1.1:74623893-74623912 | MS.gene80048:CDS | 35.0% | |
| CAGCATACTATCTCTCTAAT+CGG | + | chr1.1:74621912-74621931 | None:intergenic | 35.0% | |
| CCCAGTAAAAGTTAAAACTC+TGG | - | chr1.1:74621948-74621967 | MS.gene80048:intron | 35.0% | |
| CTAATAGCACAAACAACTCA+TGG | - | chr1.1:74622652-74622671 | MS.gene80048:intron | 35.0% | |
| CTAATCCCGAGATCTATTTA+AGG | + | chr1.1:74620845-74620864 | None:intergenic | 35.0% | |
| CTATATTTGAAGAACTGCTG+AGG | - | chr1.1:74623272-74623291 | MS.gene80048:intron | 35.0% | |
| GAAGAGATGATAGAACTTGA+GGG | - | chr1.1:74622821-74622840 | MS.gene80048:intron | 35.0% | |
| GATCAATTGTTCCATTCTTG+CGG | + | chr1.1:74622910-74622929 | None:intergenic | 35.0% | |
| GTAAAAGTTAAAACTCTGGC+TGG | - | chr1.1:74621952-74621971 | MS.gene80048:intron | 35.0% | |
| GTCTTAATGTCAGTAGTCAT+TGG | - | chr1.1:74623086-74623105 | MS.gene80048:intron | 35.0% | |
| TAAAAGTGATGCTGTGAATC+AGG | - | chr1.1:74622850-74622869 | MS.gene80048:intron | 35.0% | |
| TACAAAGCACGATAATCACA+CGG | + | chr1.1:74623610-74623629 | None:intergenic | 35.0% | |
| TGCTGCCTTCAAAATAAAGA+AGG | - | chr1.1:74621827-74621846 | MS.gene80048:intron | 35.0% | |
| TGTGATTATCGTGCTTTGTA+TGG | - | chr1.1:74623610-74623629 | MS.gene80048:intron | 35.0% | |
| TTCCTTAGCATAAAGCACAT+TGG | + | chr1.1:74623335-74623354 | None:intergenic | 35.0% | |
| ! | AGGAATTGGTTTCTTTAGAG+AGG | - | chr1.1:74622870-74622889 | MS.gene80048:intron | 35.0% |
| ! | AGGCAATAAAGTGTTACAGA+AGG | - | chr1.1:74623779-74623798 | MS.gene80048:CDS | 35.0% |
| ! | GGAATTGGTTTCTTTAGAGA+GGG | - | chr1.1:74622871-74622890 | MS.gene80048:intron | 35.0% |
| ! | GGCAATAAAGTGTTACAGAA+GGG | - | chr1.1:74623780-74623799 | MS.gene80048:CDS | 35.0% |
| ! | GGTCTTATACTGAAACAGAA+AGG | - | chr1.1:74622950-74622969 | MS.gene80048:intron | 35.0% |
| ! | TATGCTAAGGAATGCTTTTC+TGG | - | chr1.1:74623343-74623362 | MS.gene80048:intron | 35.0% |
| ! | TTTGTGGGAAAGTCTGTTTT+GGG | - | chr1.1:74621143-74621162 | MS.gene80048:CDS | 35.0% |
| ! | TTTGTTGAGTTCCATTTTGG+GGG | - | chr1.1:74621219-74621238 | MS.gene80048:CDS | 35.0% |
| ! | TTTTGTGGGAAAGTCTGTTT+TGG | - | chr1.1:74621142-74621161 | MS.gene80048:CDS | 35.0% |
| !! | ATTTGCTATGTTGTCAGTTC+AGG | - | chr1.1:74621245-74621264 | MS.gene80048:CDS | 35.0% |
| !! | GAAATTACTGCGTTTGCTAT+TGG | + | chr1.1:74622376-74622395 | None:intergenic | 35.0% |
| !! | TGGATTAGTACATTGTGGTT+AGG | - | chr1.1:74620759-74620778 | MS.gene80048:CDS | 35.0% |
| !! | TTTTAAGAGAGCCCTTAAAC+TGG | - | chr1.1:74623480-74623499 | MS.gene80048:intron | 35.0% |
| !!! | ACTGAGTTTTTTTGGGGTTT+TGG | - | chr1.1:74622730-74622749 | MS.gene80048:intron | 35.0% |
| !!! | GCCAGAGTTTTAACTTTTAC+TGG | + | chr1.1:74621952-74621971 | None:intergenic | 35.0% |
| AAAACTTGGAAAGTAGGCAC+AGG | - | chr1.1:74622157-74622176 | MS.gene80048:intron | 40.0% | |
| AACGTCGTCGTTTAAGGAAT+AGG | + | chr1.1:74620340-74620359 | None:intergenic | 40.0% | |
| AAGAAGAACTGAAGAAGCAG+AGG | - | chr1.1:74623990-74624009 | MS.gene80048:CDS | 40.0% | |
| AATCGCAAAAAGCTCAACTC+TGG | - | chr1.1:74621432-74621451 | MS.gene80048:CDS | 40.0% | |
| AATCTGTAGATAGCTACCCT+TGG | - | chr1.1:74623005-74623024 | MS.gene80048:intron | 40.0% | |
| ACAAAGCACGATAATCACAC+GGG | + | chr1.1:74623609-74623628 | None:intergenic | 40.0% | |
| ACACGTCTTCTCGATTATAC+TGG | - | chr1.1:74624021-74624040 | MS.gene80048:CDS | 40.0% | |
| ACATACGAAACACCTGCAAT+CGG | + | chr1.1:74620518-74620537 | None:intergenic | 40.0% | |
| ACATTAGGCCAGAACATAGA+AGG | - | chr1.1:74621629-74621648 | MS.gene80048:intron | 40.0% | |
| ACGTCGTCGTTTAAGGAATA+GGG | + | chr1.1:74620339-74620358 | None:intergenic | 40.0% | |
| ACTGACATGTCATCTCTTCA+TGG | - | chr1.1:74621724-74621743 | MS.gene80048:intron | 40.0% | |
| ACTGAGCATGTAGCAACATT+AGG | - | chr1.1:74621614-74621633 | MS.gene80048:CDS | 40.0% | |
| AGCAAAGCCTCAATCATGTT+AGG | + | chr1.1:74623943-74623962 | None:intergenic | 40.0% | |
| ATAGACTGCCTTCTATGTTC+TGG | + | chr1.1:74621640-74621659 | None:intergenic | 40.0% | |
| ATCGCAAAAAGCTCAACTCT+GGG | - | chr1.1:74621433-74621452 | MS.gene80048:CDS | 40.0% | |
| ATGATAGAACTTGAGGGTCT+GGG | - | chr1.1:74622827-74622846 | MS.gene80048:intron | 40.0% | |
| CACATCTTAGACTTGACATG+AGG | + | chr1.1:74621753-74621772 | None:intergenic | 40.0% | |
| CAGAAAGGATTTAGAGAGGA+TGG | - | chr1.1:74623897-74623916 | MS.gene80048:CDS | 40.0% | |
| CATCTTAGACTTGACATGAG+GGG | + | chr1.1:74621751-74621770 | None:intergenic | 40.0% | |
| CATGTTCTACGGGATCAAAT+TGG | - | chr1.1:74620635-74620654 | MS.gene80048:CDS | 40.0% | |
| CCAGTCTCTACCAAAAACTA+AGG | - | chr1.1:74623128-74623147 | MS.gene80048:intron | 40.0% | |
| CTCCAATGTGCTTTATGCTA+AGG | - | chr1.1:74623330-74623349 | MS.gene80048:intron | 40.0% | |
| GAGCAGCTCTCTTATATTCA+CGG | + | chr1.1:74620616-74620635 | None:intergenic | 40.0% | |
| GGAAGAGATGATAGAACTTG+AGG | - | chr1.1:74622820-74622839 | MS.gene80048:intron | 40.0% | |
| GGAATAGGGAAAATGAGAGA+AGG | + | chr1.1:74620325-74620344 | None:intergenic | 40.0% | |
| GTGGAAGTTCAAGTATTCGT+CGG | - | chr1.1:74620459-74620478 | MS.gene80048:CDS | 40.0% | |
| TACAATGAACAAAGCACACC+AGG | - | chr1.1:74621699-74621718 | MS.gene80048:intron | 40.0% | |
| TAGCAAATATCCCCCCAAAA+TGG | + | chr1.1:74621233-74621252 | None:intergenic | 40.0% | |
| TATCGTGCTTTGTATGGACT+AGG | - | chr1.1:74623616-74623635 | MS.gene80048:intron | 40.0% | |
| TCATGAATACTCTATGGGCA+AGG | + | chr1.1:74623378-74623397 | None:intergenic | 40.0% | |
| TGATGCTGTGAATCAGGAAT+TGG | - | chr1.1:74622856-74622875 | MS.gene80048:intron | 40.0% | |
| TGTCAGTAGTCATTGGATGA+AGG | - | chr1.1:74623093-74623112 | MS.gene80048:intron | 40.0% | |
| ! | ACGACGAGATGATTTTGTGA+AGG | - | chr1.1:74621072-74621091 | MS.gene80048:CDS | 40.0% |
| ! | AGTGCTGTTGGAAAGTAAGT+TGG | - | chr1.1:74621875-74621894 | MS.gene80048:intron | 40.0% |
| ! | CTGTTACACAAACTGACTTC+AGG | - | chr1.1:74622430-74622449 | MS.gene80048:intron | 40.0% |
| ! | GGCAGCATTTTACTACAGAA+AGG | - | chr1.1:74623882-74623901 | MS.gene80048:CDS | 40.0% |
| ! | GGTGTGTATGTTGTGTTGAT+GGG | - | chr1.1:74621006-74621025 | MS.gene80048:CDS | 40.0% |
| ! | GTATTGATGAAAATGCAGGG+CGG | - | chr1.1:74620367-74620386 | MS.gene80048:intron | 40.0% |
| ! | TTGTTGAGTTCCATTTTGGG+GGG | - | chr1.1:74621220-74621239 | MS.gene80048:CDS | 40.0% |
| !! | ATTTGATTTGAGTTGGGTGC+AGG | - | chr1.1:74621674-74621693 | MS.gene80048:intron | 40.0% |
| !! | TGATTTCTAGCTGGTTCGTT+TGG | - | chr1.1:74620792-74620811 | MS.gene80048:CDS | 40.0% |
| !! | TTTGATTTGAGTTGGGTGCA+GGG | - | chr1.1:74621675-74621694 | MS.gene80048:intron | 40.0% |
| !!! | CCTTAGTTTTTGGTAGAGAC+TGG | + | chr1.1:74623131-74623150 | None:intergenic | 40.0% |
| AATTCACGCCTTCGAATACG+AGG | - | chr1.1:74620429-74620448 | MS.gene80048:CDS | 45.0% | |
| ACGACAAACTTCCGTGTTAG+TGG | - | chr1.1:74621494-74621513 | MS.gene80048:CDS | 45.0% | |
| ACTCTGAATGCAGCTTTGCA+AGG | + | chr1.1:74623846-74623865 | None:intergenic | 45.0% | |
| AGAGAGCTGCTCATGTTCTA+CGG | - | chr1.1:74620624-74620643 | MS.gene80048:CDS | 45.0% | |
| AGAGGATGGAATCTGAAGAG+AGG | - | chr1.1:74623911-74623930 | MS.gene80048:CDS | 45.0% | |
| AGCATAAGAGGCAGAAGACT+AGG | + | chr1.1:74622541-74622560 | None:intergenic | 45.0% | |
| ATCCACAGTCGGGAATCATT+TGG | + | chr1.1:74623712-74623731 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+AGG | - | chr1.1:74623916-74623935 | MS.gene80048:CDS | 45.0% | |
| CGTTGAAACCTCGTATTCGA+AGG | + | chr1.1:74620440-74620459 | None:intergenic | 45.0% | |
| CTCTCTGCTTGGACACTTAT+GGG | - | chr1.1:74623514-74623533 | MS.gene80048:intron | 45.0% | |
| GAGGATGGAATCTGAAGAGA+GGG | - | chr1.1:74623912-74623931 | MS.gene80048:CDS | 45.0% | |
| GAGGATTGATCCTTACAGAG+TGG | - | chr1.1:74623291-74623310 | MS.gene80048:intron | 45.0% | |
| GATGATAGAACTTGAGGGTC+TGG | - | chr1.1:74622826-74622845 | MS.gene80048:intron | 45.0% | |
| GCAAAGCTGCATTCAGAGTT+GGG | - | chr1.1:74623847-74623866 | MS.gene80048:CDS | 45.0% | |
| GCATAAGAGGCAGAAGACTA+GGG | + | chr1.1:74622540-74622559 | None:intergenic | 45.0% | |
| GGAAGGACCTAACATGATTG+AGG | - | chr1.1:74623933-74623952 | MS.gene80048:CDS | 45.0% | |
| GGGCATCAAACTGTGATGAT+GGG | - | chr1.1:74623800-74623819 | MS.gene80048:CDS | 45.0% | |
| GGGTGTGTATGTTGTGTTGA+TGG | - | chr1.1:74621005-74621024 | MS.gene80048:CDS | 45.0% | |
| GTCAGTTCAGGATAGCACAA+CGG | - | chr1.1:74621257-74621276 | MS.gene80048:CDS | 45.0% | |
| GTCTCTATTCCGCTTCCAAA+TGG | - | chr1.1:74620258-74620277 | MS.gene80048:CDS | 45.0% | |
| TAGATAGCTACCCTTGGAAC+TGG | - | chr1.1:74623011-74623030 | MS.gene80048:intron | 45.0% | |
| TATTTCAACAGCCCGACGAT+AGG | + | chr1.1:74623584-74623603 | None:intergenic | 45.0% | |
| TCCACAGTCGGGAATCATTT+GGG | + | chr1.1:74623711-74623730 | None:intergenic | 45.0% | |
| TCCATGTCTTCCACTCTGTA+AGG | + | chr1.1:74623304-74623323 | None:intergenic | 45.0% | |
| TCCTTACAGAGTGGAAGACA+TGG | - | chr1.1:74623300-74623319 | MS.gene80048:intron | 45.0% | |
| TCGAATACGAGGTTTCAACG+TGG | - | chr1.1:74620440-74620459 | MS.gene80048:CDS | 45.0% | |
| TCTCTCTGCTTGGACACTTA+TGG | - | chr1.1:74623513-74623532 | MS.gene80048:intron | 45.0% | |
| TGCAAAGCTGCATTCAGAGT+TGG | - | chr1.1:74623846-74623865 | MS.gene80048:CDS | 45.0% | |
| TTGTCTACACTCCGCAAGAA+TGG | - | chr1.1:74622896-74622915 | MS.gene80048:intron | 45.0% | |
| ! | ACAATCTAGTTTCCCTCCAG+CGG | - | chr1.1:74624206-74624225 | MS.gene80048:CDS | 45.0% |
| ! | AGGGCATCAAACTGTGATGA+TGG | - | chr1.1:74623799-74623818 | MS.gene80048:CDS | 45.0% |
| ! | CCTGCAGTCATCTCAGTTTT+GGG | + | chr1.1:74621293-74621312 | None:intergenic | 45.0% |
| ! | CTGCAGTCATCTCAGTTTTG+GGG | + | chr1.1:74621292-74621311 | None:intergenic | 45.0% |
| ! | GGCATCAAACTGTGATGATG+GGG | - | chr1.1:74623801-74623820 | MS.gene80048:CDS | 45.0% |
| ! | GGGCTTTAGCAATTTGAGCT+TGG | + | chr1.1:74623219-74623238 | None:intergenic | 45.0% |
| ! | TCCTGCAGTCATCTCAGTTT+TGG | + | chr1.1:74621294-74621313 | None:intergenic | 45.0% |
| ! | TGGACTAGGACAAGCTTATG+AGG | - | chr1.1:74623630-74623649 | MS.gene80048:intron | 45.0% |
| ! | TTAAAACTCTGGCTGGCTGT+TGG | - | chr1.1:74621959-74621978 | MS.gene80048:intron | 45.0% |
| ! | TTCGAAGGCGTGAATTTCGA+TGG | + | chr1.1:74620425-74620444 | None:intergenic | 45.0% |
| !! | CTGGCTGTTGGCCTTAAAAT+TGG | - | chr1.1:74621971-74621990 | MS.gene80048:intron | 45.0% |
| !! | TGGGAAAGTCTGTTTTGGGT+TGG | - | chr1.1:74621147-74621166 | MS.gene80048:CDS | 45.0% |
| !!! | GAAAGTCTGTTTTGGGTTGG+GGG | - | chr1.1:74621150-74621169 | MS.gene80048:CDS | 45.0% |
| !!! | GGAAAGTCTGTTTTGGGTTG+GGG | - | chr1.1:74621149-74621168 | MS.gene80048:CDS | 45.0% |
| !!! | GGGAAAGTCTGTTTTGGGTT+GGG | - | chr1.1:74621148-74621167 | MS.gene80048:CDS | 45.0% |
| ACCCAAATGATTCCCGACTG+TGG | - | chr1.1:74623707-74623726 | MS.gene80048:intron | 50.0% | |
| ACGATAGGCATTCACAGCAG+CGG | + | chr1.1:74623569-74623588 | None:intergenic | 50.0% | |
| ACTTCGTCCTCCTCCATAAC+TGG | + | chr1.1:74620548-74620567 | None:intergenic | 50.0% | |
| AGCCATTGCTATCCACAGTC+GGG | + | chr1.1:74623722-74623741 | None:intergenic | 50.0% | |
| CACGGAAGTTTGTCGTGTCA+CGG | + | chr1.1:74621490-74621509 | None:intergenic | 50.0% | |
| CCCAAAACTGAGATGACTGC+AGG | - | chr1.1:74621290-74621309 | MS.gene80048:CDS | 50.0% | |
| CTGCTGTGAATGCCTATCGT+CGG | - | chr1.1:74623569-74623588 | MS.gene80048:intron | 50.0% | |
| GAAGTTTGTCGTGTCACGGT+GGG | + | chr1.1:74621486-74621505 | None:intergenic | 50.0% | |
| GAGAGCTGCTCATGTTCTAC+GGG | - | chr1.1:74620625-74620644 | MS.gene80048:CDS | 50.0% | |
| GAGATGACATGTCAGTCACC+TGG | + | chr1.1:74621720-74621739 | None:intergenic | 50.0% | |
| GAGCCATTGCTATCCACAGT+CGG | + | chr1.1:74623723-74623742 | None:intergenic | 50.0% | |
| GAGGAGGACGAAGTTGTTGA+TGG | - | chr1.1:74620554-74620573 | MS.gene80048:CDS | 50.0% | |
| GGCAGGAGAAAAGCGAAAAG+AGG | - | chr1.1:74622799-74622818 | MS.gene80048:intron | 50.0% | |
| GGCAGTTAGCACCACTAACA+CGG | + | chr1.1:74621508-74621527 | None:intergenic | 50.0% | |
| GTATGTCGCTACGCCAGTTA+TGG | - | chr1.1:74620532-74620551 | MS.gene80048:CDS | 50.0% | |
| TAAGGATTGCAGCTCAGTCC+AGG | + | chr1.1:74623041-74623060 | None:intergenic | 50.0% | |
| TAGCATGCAACAGTGCCCAA+TGG | + | chr1.1:74622635-74622654 | None:intergenic | 50.0% | |
| TCCAGGCATTCCAGTTCCAA+GGG | + | chr1.1:74623024-74623043 | None:intergenic | 50.0% | |
| TGCTGTGAATGCCTATCGTC+GGG | - | chr1.1:74623570-74623589 | MS.gene80048:intron | 50.0% | |
| TTCCCGACTGTGGATAGCAA+TGG | - | chr1.1:74623717-74623736 | MS.gene80048:intron | 50.0% | |
| TTGATGAAAATGCAGGGCGG+CGG | - | chr1.1:74620370-74620389 | MS.gene80048:intron | 50.0% | |
| TTTGGCGCGTACAGTTCTTG+TGG | - | chr1.1:74622982-74623001 | MS.gene80048:intron | 50.0% | |
| !! | AGCTCAACTCTGGGATGCTA+TGG | - | chr1.1:74621442-74621461 | MS.gene80048:CDS | 50.0% |
| !! | TTCGCTTTTCTCCTGCCTGT+AGG | + | chr1.1:74622796-74622815 | None:intergenic | 50.0% |
| AAGTGCTCAACATCCGCTGG+AGG | + | chr1.1:74624222-74624241 | None:intergenic | 55.0% | |
| ACCCTTGGAACTGGAATGCC+TGG | - | chr1.1:74623020-74623039 | MS.gene80048:intron | 55.0% | |
| AGAGTTGGGACGCACTGAAG+AGG | - | chr1.1:74623861-74623880 | MS.gene80048:CDS | 55.0% | |
| AGTGCTCAACATCCGCTGGA+GGG | + | chr1.1:74624221-74624240 | None:intergenic | 55.0% | |
| CCATGCTCTGCACTTCCTAC+AGG | - | chr1.1:74622778-74622797 | MS.gene80048:intron | 55.0% | |
| CGATAGGCATTCACAGCAGC+GGG | + | chr1.1:74623568-74623587 | None:intergenic | 55.0% | |
| GGAAGTTTGTCGTGTCACGG+TGG | + | chr1.1:74621487-74621506 | None:intergenic | 55.0% | |
| GTCCAGGCATTCCAGTTCCA+AGG | + | chr1.1:74623025-74623044 | None:intergenic | 55.0% | |
| TGTCGCTACGCCAGTTATGG+AGG | - | chr1.1:74620535-74620554 | MS.gene80048:CDS | 55.0% | |
| ! | ACAATGACGACGCCGATTGC+AGG | - | chr1.1:74620503-74620522 | MS.gene80048:CDS | 55.0% |
| ! | CCTGTAGGAAGTGCAGAGCA+TGG | + | chr1.1:74622781-74622800 | None:intergenic | 55.0% |
| !! | GGAAAGTGCTCAACATCCGC+TGG | + | chr1.1:74624225-74624244 | None:intergenic | 55.0% |
| CCAGCTTCGCAAGCTCGATG+AGG | - | chr1.1:74623759-74623778 | MS.gene80048:CDS | 60.0% | |
| CCTCATCGAGCTTGCGAAGC+TGG | + | chr1.1:74623762-74623781 | None:intergenic | 60.0% | |
| CGCTACGCCAGTTATGGAGG+AGG | - | chr1.1:74620538-74620557 | MS.gene80048:CDS | 60.0% | |
| CTGGGATGCTATGGCGTGTG+TGG | - | chr1.1:74621451-74621470 | MS.gene80048:CDS | 60.0% | |
| GCTCTGCACTTCCTACAGGC+AGG | - | chr1.1:74622782-74622801 | MS.gene80048:intron | 60.0% | |
| GGATGCTATGGCGTGTGTGG+AGG | - | chr1.1:74621454-74621473 | MS.gene80048:CDS | 60.0% | |
| AGGGCGGCGGAGCAATTGGT+AGG | - | chr1.1:74620383-74620402 | MS.gene80048:intron | 65.0% | |
| ATGCAGGGCGGCGGAGCAAT+TGG | - | chr1.1:74620379-74620398 | MS.gene80048:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 74620194 | 74624251 | 74620194 | ID=MS.gene80048 |
| chr1.1 | mRNA | 74620194 | 74624251 | 74620194 | ID=MS.gene80048.t1;Parent=MS.gene80048 |
| chr1.1 | exon | 74624166 | 74624251 | 74624166 | ID=MS.gene80048.t1.exon1;Parent=MS.gene80048.t1 |
| chr1.1 | CDS | 74624166 | 74624251 | 74624166 | ID=cds.MS.gene80048.t1;Parent=MS.gene80048.t1 |
| chr1.1 | exon | 74623748 | 74624060 | 74623748 | ID=MS.gene80048.t1.exon2;Parent=MS.gene80048.t1 |
| chr1.1 | CDS | 74623748 | 74624060 | 74623748 | ID=cds.MS.gene80048.t1;Parent=MS.gene80048.t1 |
| chr1.1 | exon | 74620398 | 74621645 | 74620398 | ID=MS.gene80048.t1.exon3;Parent=MS.gene80048.t1 |
| chr1.1 | CDS | 74620398 | 74621645 | 74620398 | ID=cds.MS.gene80048.t1;Parent=MS.gene80048.t1 |
| chr1.1 | exon | 74620194 | 74620283 | 74620194 | ID=MS.gene80048.t1.exon4;Parent=MS.gene80048.t1 |
| chr1.1 | CDS | 74620194 | 74620283 | 74620194 | ID=cds.MS.gene80048.t1;Parent=MS.gene80048.t1 |
| Gene Sequence |
| Protein sequence |
