Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96778.t1 | XP_013456753.1 | 99 | 884 | 9 | 0 | 1 | 884 | 1 | 884 | 0.00E+00 | 1721.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96778.t1 | Q8H1U5 | 70.4 | 889 | 234 | 7 | 1 | 884 | 1 | 865 | 0.0e+00 | 1211.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96778.t1 | A0A072ULX4 | 99.0 | 884 | 9 | 0 | 1 | 884 | 1 | 884 | 0.0e+00 | 1721.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene96778 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene049418 | MS.gene96778 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene051248 | MS.gene96778 | 0.812488 | 4.13E-51 | -1.69E-46 |
| MS.gene056228 | MS.gene96778 | 0.821496 | 3.92E-53 | -1.69E-46 |
| MS.gene059154 | MS.gene96778 | 0.812739 | 3.64E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80048 | MS.gene96778 | PPI |
| MS.gene39862 | MS.gene96778 | PPI |
| MS.gene70750 | MS.gene96778 | PPI |
| MS.gene97314 | MS.gene96778 | PPI |
| MS.gene25107 | MS.gene96778 | PPI |
| MS.gene017070 | MS.gene96778 | PPI |
| MS.gene032323 | MS.gene96778 | PPI |
| MS.gene37878 | MS.gene96778 | PPI |
| MS.gene96778 | MS.gene016802 | PPI |
| MS.gene25827 | MS.gene96778 | PPI |
| MS.gene022091 | MS.gene96778 | PPI |
| MS.gene32240 | MS.gene96778 | PPI |
| MS.gene034323 | MS.gene96778 | PPI |
| MS.gene96778 | MS.gene057101 | PPI |
| MS.gene38996 | MS.gene96778 | PPI |
| MS.gene95446 | MS.gene96778 | PPI |
| MS.gene96778 | MS.gene006458 | PPI |
| MS.gene30421 | MS.gene96778 | PPI |
| MS.gene81557 | MS.gene96778 | PPI |
| MS.gene059359 | MS.gene96778 | PPI |
| MS.gene074437 | MS.gene96778 | PPI |
| MS.gene96778 | MS.gene26890 | PPI |
| MS.gene96778 | MS.gene33573 | PPI |
| MS.gene038286 | MS.gene96778 | PPI |
| MS.gene48038 | MS.gene96778 | PPI |
| MS.gene007855 | MS.gene96778 | PPI |
| MS.gene43188 | MS.gene96778 | PPI |
| MS.gene96778 | MS.gene051100 | PPI |
| MS.gene044173 | MS.gene96778 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96778.t1 | MTR_4g082265 | 98.982 | 884 | 9 | 0 | 1 | 884 | 1 | 884 | 0.0 | 1801 |
| MS.gene96778.t1 | MTR_4g082150 | 97.738 | 884 | 20 | 0 | 1 | 884 | 1 | 884 | 0.0 | 1783 |
| MS.gene96778.t1 | MTR_7g021880 | 88.488 | 886 | 93 | 4 | 1 | 883 | 32 | 911 | 0.0 | 1594 |
| MS.gene96778.t1 | MTR_4g082150 | 98.305 | 708 | 12 | 0 | 177 | 884 | 1 | 708 | 0.0 | 1434 |
| MS.gene96778.t1 | MTR_7g022050 | 65.546 | 119 | 36 | 2 | 488 | 603 | 209 | 325 | 2.21e-32 | 134 |
| MS.gene96778.t1 | MTR_7g022050 | 60.000 | 60 | 20 | 1 | 824 | 883 | 270 | 325 | 1.29e-11 | 68.9 |
| MS.gene96778.t1 | MTR_0073s0020 | 90.000 | 60 | 6 | 0 | 488 | 547 | 204 | 263 | 2.54e-24 | 104 |
| MS.gene96778.t1 | MTR_0073s0020 | 82.500 | 40 | 7 | 0 | 844 | 883 | 262 | 301 | 7.76e-12 | 67.8 |
| MS.gene96778.t1 | MTR_2g437390 | 27.320 | 194 | 131 | 3 | 553 | 745 | 423 | 607 | 1.10e-11 | 69.3 |
| MS.gene96778.t1 | MTR_4g119413 | 27.168 | 173 | 118 | 1 | 553 | 725 | 425 | 589 | 2.56e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96778.t1 | AT2G04660 | 70.112 | 890 | 235 | 9 | 1 | 884 | 1 | 865 | 0.0 | 1216 |
Find 185 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAACACTGCAAGATTTA+AGG | 0.110861 | 4.3:+28255693 | MS.gene96778:CDS |
| GGACAGCATGACGATGATTT+TGG | 0.120787 | 4.3:-28255608 | None:intergenic |
| CCTCTTAAGTAATCCCTTAT+TGG | 0.161441 | 4.3:-28256360 | None:intergenic |
| AACGATTATCTCAAATAATT+TGG | 0.172152 | 4.3:-28255720 | None:intergenic |
| CTATCATATCTTCTAATTTC+TGG | 0.192152 | 4.3:+28257297 | MS.gene96778:CDS |
| GAAGAAATTCAAGAGAATTT+TGG | 0.200492 | 4.3:+28256495 | MS.gene96778:CDS |
| GGAATGATTGTTGGCATAAT+TGG | 0.254142 | 4.3:+28256752 | MS.gene96778:CDS |
| CCTCTAAGACTTTGAGAAAA+TGG | 0.259142 | 4.3:-28253801 | None:intergenic |
| GGAGAAGTGTCTGTTAATTT+TGG | 0.260716 | 4.3:+28254385 | MS.gene96778:CDS |
| TGGTTTCTGCTTCCCTTCAA+TGG | 0.267589 | 4.3:-28256710 | None:intergenic |
| CAACGGGTTCCGGCAGGTTA+AGG | 0.272229 | 4.3:-28258154 | None:intergenic |
| GAAATGGGTCATCGAGGTTT+TGG | 0.288023 | 4.3:+28253904 | MS.gene96778:CDS |
| AAAGACCTTGCAGCTGCTAT+TGG | 0.292801 | 4.3:+28258570 | MS.gene96778:CDS |
| TCATGATGTATCTCAAAATA+AGG | 0.296986 | 4.3:+28254944 | MS.gene96778:CDS |
| CATGCCCTTCTTGTCTATCT+TGG | 0.297786 | 4.3:+28255533 | MS.gene96778:CDS |
| AGGCAGTTGGTGAACCAATA+AGG | 0.300745 | 4.3:+28256346 | MS.gene96778:CDS |
| TGAGCTTGTATACACTATTA+TGG | 0.302563 | 4.3:+28258909 | MS.gene96778:CDS |
| GACTGTCTCTTCTGTGCTTA+TGG | 0.305488 | 4.3:+28254499 | MS.gene96778:CDS |
| TGCTTTGGAAGAAATCTCTT+TGG | 0.326554 | 4.3:+28254349 | MS.gene96778:CDS |
| CAAGAAGGGCATGGAGAAAC+TGG | 0.330140 | 4.3:-28255523 | None:intergenic |
| AACGGGTTCCGGCAGGTTAA+GGG | 0.332582 | 4.3:-28258153 | None:intergenic |
| TGTTGGAGTGATTTGTCATA+AGG | 0.333266 | 4.3:-28259718 | None:intergenic |
| GGGGTCATTGCAGAGTCGTC+GGG | 0.345702 | 4.3:+28258874 | MS.gene96778:CDS |
| TGGAGTTGCAGTTTGAAGAT+AGG | 0.349470 | 4.3:+28258399 | MS.gene96778:CDS |
| GGCAATGCTCAGGAACTTCT+TGG | 0.357857 | 4.3:+28258970 | MS.gene96778:CDS |
| ATTATGCTCAATGATCTAAT+TGG | 0.362022 | 4.3:+28257063 | MS.gene96778:CDS |
| GACAGTCCATTGATACTTAG+AGG | 0.365748 | 4.3:-28254483 | None:intergenic |
| CAGCAGGATCTATCGTCCTT+AGG | 0.366985 | 4.3:-28256311 | None:intergenic |
| GACATGGATTTAGATGAAAA+AGG | 0.367608 | 4.3:+28254969 | MS.gene96778:CDS |
| TAATTTCTGGCCTCCGATAC+AGG | 0.368371 | 4.3:+28257310 | MS.gene96778:CDS |
| AGAAGCTTGTCAACGGGTTC+CGG | 0.372296 | 4.3:-28258164 | None:intergenic |
| TTTATGGCAGAAATTTATCT+TGG | 0.376798 | 4.3:+28259505 | MS.gene96778:intron |
| ATAATAATAGATGCAAGAAC+AGG | 0.380155 | 4.3:-28258443 | None:intergenic |
| TGAGGAGAAGTTAGAACTTC+GGG | 0.382470 | 4.3:+28259771 | MS.gene96778:CDS |
| CTCTTTGGAGAAACAGTATC+AGG | 0.383970 | 4.3:+28254364 | MS.gene96778:CDS |
| CAAAGGAAGGTTGACATACT+TGG | 0.384395 | 4.3:+28256731 | MS.gene96778:CDS |
| ATCTATTCAAAGCTGGATAC+AGG | 0.386253 | 4.3:+28255368 | MS.gene96778:CDS |
| CCATGCTTTACAATCTTTCA+AGG | 0.390562 | 4.3:+28254409 | MS.gene96778:CDS |
| CAAGTATGTCAACCTTCCTT+TGG | 0.402337 | 4.3:-28256730 | None:intergenic |
| GGCAGTTGGTGAACCAATAA+GGG | 0.403262 | 4.3:+28256347 | MS.gene96778:CDS |
| TTATGGCAGAAATTTATCTT+GGG | 0.412611 | 4.3:+28259506 | MS.gene96778:intron |
| AGAAGAGGGTATAGCTTTCA+AGG | 0.415712 | 4.3:-28253666 | None:intergenic |
| TGTCTGAGGTGGCTGACTTA+TGG | 0.416119 | 4.3:-28257118 | None:intergenic |
| GTTGGAGTGATTTGTCATAA+GGG | 0.421083 | 4.3:-28259717 | None:intergenic |
| GGTCTTCGCTGAGTGTATCT+AGG | 0.426120 | 4.3:-28253630 | None:intergenic |
| CAATCTCTTCTCGGCGGTGC+TGG | 0.429156 | 4.3:+28253700 | MS.gene96778:CDS |
| AAGACCTTGCAGCTGCTATT+GGG | 0.432206 | 4.3:+28258571 | MS.gene96778:CDS |
| GTTCTTGATCTCAGAAGTCT+TGG | 0.439927 | 4.3:+28255089 | MS.gene96778:CDS |
| GGGTCATTGCAGAGTCGTCG+GGG | 0.444773 | 4.3:+28258875 | MS.gene96778:CDS |
| TTGGGGATGCTCACAAACTT+TGG | 0.447157 | 4.3:+28259524 | MS.gene96778:CDS |
| GACATACTTGGAATGATTGT+TGG | 0.448809 | 4.3:+28256743 | MS.gene96778:CDS |
| AAATCATCGTCATGCTGTCC+TGG | 0.449614 | 4.3:+28255611 | MS.gene96778:CDS |
| TCAAGTGCGTCTGGAAATCC+TGG | 0.451021 | 4.3:+28256441 | MS.gene96778:CDS |
| AGCAGGATCTATCGTCCTTA+GGG | 0.456615 | 4.3:-28256310 | None:intergenic |
| CCAATAAGGGATTACTTAAG+AGG | 0.456839 | 4.3:+28256360 | MS.gene96778:CDS |
| TTCAATGGATCTGCTTCTAC+AGG | 0.459480 | 4.3:-28256695 | None:intergenic |
| AGCAGCTGCAAGGTCTTTAG+AGG | 0.459954 | 4.3:-28258565 | None:intergenic |
| AAGTCTTGGATTTACTTCAA+TGG | 0.460838 | 4.3:+28255103 | MS.gene96778:CDS |
| CTTTAATAGTAGAAACGTAT+TGG | 0.463553 | 4.3:-28256287 | None:intergenic |
| GTATTGGTGTAATATATCAT+TGG | 0.463906 | 4.3:-28256271 | None:intergenic |
| GGTCATTGCAGAGTCGTCGG+GGG | 0.467945 | 4.3:+28258876 | MS.gene96778:CDS |
| GGATCTGCTTCTACAGGATC+AGG | 0.468033 | 4.3:-28256689 | None:intergenic |
| TACCTGTGGATGTATTAAAC+AGG | 0.470219 | 4.3:+28258595 | MS.gene96778:CDS |
| TTTCAAGGATTTCGTGAAGT+TGG | 0.472247 | 4.3:-28253651 | None:intergenic |
| TTTGTTGGTTTGAACAAGAA+TGG | 0.472788 | 4.3:+28253951 | MS.gene96778:CDS |
| CACCAGCTTTGAATGTTGTC+CGG | 0.474610 | 4.3:-28256196 | None:intergenic |
| AGCTACGAAAGTACTTCATC+AGG | 0.478342 | 4.3:+28255566 | MS.gene96778:CDS |
| TACCATTAGCTATATTGCAT+TGG | 0.480614 | 4.3:+28254868 | MS.gene96778:intron |
| GGAGTTGCAGTTTGAAGATA+GGG | 0.482664 | 4.3:+28258400 | MS.gene96778:CDS |
| AGGCGGCAGTGGCAATGCTC+AGG | 0.487470 | 4.3:+28258960 | MS.gene96778:CDS |
| AGTAGGAATGGAGGCGGCAG+TGG | 0.489096 | 4.3:+28258949 | MS.gene96778:CDS |
| GTCATTGCAGAGTCGTCGGG+GGG | 0.489601 | 4.3:+28258877 | MS.gene96778:CDS |
| ACCTTACCTCTAAGTATCAA+TGG | 0.493728 | 4.3:+28254477 | MS.gene96778:CDS |
| CTCAAGACCATGTTTACAAA+GGG | 0.496856 | 4.3:-28253764 | None:intergenic |
| AAACCAACAAAATCAGCATA+AGG | 0.497257 | 4.3:-28253939 | None:intergenic |
| GAGTGTGCTGTGTAATGCTT+TGG | 0.502770 | 4.3:+28254334 | MS.gene96778:CDS |
| GGCAAAAGTGTATGATGTAG+CGG | 0.502818 | 4.3:+28255317 | MS.gene96778:intron |
| CTCCTGTTTAATACATCCAC+AGG | 0.506815 | 4.3:-28258597 | None:intergenic |
| ACGTACTCTAGAACTCCTTA+AGG | 0.510812 | 4.3:+28256862 | MS.gene96778:CDS |
| TCTTACAATCTATTCAAAGC+TGG | 0.511851 | 4.3:+28255361 | MS.gene96778:CDS |
| CGTTATCGCCTTCTTACTGC+AGG | 0.512285 | 4.3:+28256240 | MS.gene96778:CDS |
| GAAGGAGATGACTGTGTATG+AGG | 0.519729 | 4.3:+28259044 | MS.gene96778:CDS |
| TCAGAGAGAAGCTTGTCAAC+GGG | 0.519759 | 4.3:-28258170 | None:intergenic |
| CAAGTAACAAAATACCTATC+GGG | 0.520343 | 4.3:-28255749 | None:intergenic |
| CCATGTTGACAGATGGGACT+GGG | 0.526083 | 4.3:+28256412 | MS.gene96778:CDS |
| CTGAGGAGAAGTTAGAACTT+CGG | 0.527615 | 4.3:+28259770 | MS.gene96778:CDS |
| ACGGGTTCCGGCAGGTTAAG+GGG | 0.528148 | 4.3:-28258152 | None:intergenic |
| GCTTGTCAACGGGTTCCGGC+AGG | 0.528380 | 4.3:-28258160 | None:intergenic |
| TCCATTGATACTTAGAGGTA+AGG | 0.529156 | 4.3:-28254478 | None:intergenic |
| TGTCCGATGGAAGTTGCGGC+TGG | 0.530148 | 4.3:+28255658 | MS.gene96778:CDS |
| AACGCCACACAATCTCTTCT+CGG | 0.535228 | 4.3:+28253691 | MS.gene96778:CDS |
| CTTTGCCCTCTTAGGTGTGG+AGG | 0.535555 | 4.3:+28257235 | MS.gene96778:intron |
| GAGTTAAGTACAGTCATGGA+TGG | 0.545785 | 4.3:+28254912 | MS.gene96778:CDS |
| GTCTTGTCCGATGGAAGTTG+CGG | 0.545950 | 4.3:+28255654 | MS.gene96778:CDS |
| GGAAGACAGATCTGTGGCCT+CGG | 0.546586 | 4.3:+28259005 | MS.gene96778:CDS |
| CCATCGGACAAGACTTTCAG+AGG | 0.547527 | 4.3:-28255645 | None:intergenic |
| AGTCACCAAGATAGACAAGA+AGG | 0.548972 | 4.3:-28255538 | None:intergenic |
| TCTTCAAGAAGGCTATCTCC+AGG | 0.554437 | 4.3:-28256459 | None:intergenic |
| TTTCATCTACAGACCTGTAT+CGG | 0.555411 | 4.3:-28257323 | None:intergenic |
| AGTAAACTGGTGAAGAACAT+TGG | 0.555932 | 4.3:+28255059 | MS.gene96778:CDS |
| CCCAGTCCCATCTGTCAACA+TGG | 0.557354 | 4.3:-28256412 | None:intergenic |
| GCCTCAAGGAAAACACCAGC+AGG | 0.557589 | 4.3:-28256327 | None:intergenic |
| ATCTCAAAATAAGGATGACA+TGG | 0.558115 | 4.3:+28254953 | MS.gene96778:CDS |
| TTGGAGTGATTTGTCATAAG+GGG | 0.559276 | 4.3:-28259716 | None:intergenic |
| ACCATGTTGACAGATGGGAC+TGG | 0.561044 | 4.3:+28256411 | MS.gene96778:CDS |
| AGTTAAGTACAGTCATGGAT+GGG | 0.561896 | 4.3:+28254913 | MS.gene96778:CDS |
| AAACACCCCGTAAGCTTCAG+TGG | 0.561927 | 4.3:+28258219 | MS.gene96778:CDS |
| TGAAGACAATGCAATATCCA+TGG | 0.562525 | 4.3:+28257259 | MS.gene96778:CDS |
| TGTAGAAGCAGATCCATTGA+AGG | 0.562590 | 4.3:+28256697 | MS.gene96778:CDS |
| ATCAGAGAGAAGCTTGTCAA+CGG | 0.564745 | 4.3:-28258171 | None:intergenic |
| CTCTGTTCAACTCTTCAAGA+AGG | 0.564962 | 4.3:-28256470 | None:intergenic |
| GAAATTAGAAGATATGATAG+TGG | 0.564975 | 4.3:-28257294 | None:intergenic |
| GCTCACAAACTTTGGTAGCA+TGG | 0.567179 | 4.3:+28259532 | MS.gene96778:CDS |
| TTTCTACTATTAAAGCCCTA+AGG | 0.569692 | 4.3:+28256295 | MS.gene96778:CDS |
| TTTATCTGGTCTAGTCTCTG+AGG | 0.569936 | 4.3:+28259753 | MS.gene96778:CDS |
| AAAACATGGCTGAGACAAGT+AGG | 0.570506 | 4.3:+28258932 | MS.gene96778:CDS |
| GCAAAAGTGTATGATGTAGC+GGG | 0.570656 | 4.3:+28255318 | MS.gene96778:CDS |
| CCTTGAAAGATTGTAAAGCA+TGG | 0.574343 | 4.3:-28254409 | None:intergenic |
| CACCGGACAACATTCAAAGC+TGG | 0.575768 | 4.3:+28256194 | MS.gene96778:CDS |
| TATGGCAGAAATTTATCTTG+GGG | 0.576637 | 4.3:+28259507 | MS.gene96778:intron |
| GTTCACACCCTTTGTAAACA+TGG | 0.577340 | 4.3:+28253757 | MS.gene96778:CDS |
| GGAACTTCTTGGAGGTGATG+AGG | 0.577500 | 4.3:+28258981 | MS.gene96778:CDS |
| GGAGGAGTTAAGTACAGTCA+TGG | 0.578050 | 4.3:+28254908 | MS.gene96778:CDS |
| ATTGTGTGGCGTTGCAGAAG+AGG | 0.578118 | 4.3:-28253681 | None:intergenic |
| TTGATGCGCCTGCAGTAAGA+AGG | 0.578224 | 4.3:-28256248 | None:intergenic |
| TTGGTTCACCAACTGCCTCA+AGG | 0.580208 | 4.3:-28256341 | None:intergenic |
| TAAGGGATTACTTAAGAGGA+AGG | 0.582412 | 4.3:+28256364 | MS.gene96778:CDS |
| ATTCCAGCCGCAACTTCCAT+CGG | 0.585035 | 4.3:-28255661 | None:intergenic |
| AGGGAAAACGCGAGGAAGTG+TGG | 0.588281 | 4.3:-28254522 | None:intergenic |
| CCTCTGAAAGTCTTGTCCGA+TGG | 0.589489 | 4.3:+28255645 | MS.gene96778:CDS |
| AATGCTCAGGAACTTCTTGG+AGG | 0.589642 | 4.3:+28258973 | MS.gene96778:CDS |
| AAACTTTGTCTTGAATACAC+CGG | 0.591489 | 4.3:+28256177 | MS.gene96778:CDS |
| ATGGCTGAGACAAGTAGGAA+TGG | 0.591664 | 4.3:+28258937 | MS.gene96778:CDS |
| TTGTGTGGCGTTGCAGAAGA+GGG | 0.593354 | 4.3:-28253680 | None:intergenic |
| CTAAGGACGATAGATCCTGC+TGG | 0.595778 | 4.3:+28256312 | MS.gene96778:CDS |
| GGATGAGCCCCTTAACCTGC+CGG | 0.599416 | 4.3:+28258145 | MS.gene96778:intron |
| CAAGATAGACAAGAAGGGCA+TGG | 0.599694 | 4.3:-28255532 | None:intergenic |
| AGGATCAAATGTCAGAGGAA+AGG | 0.602132 | 4.3:+28254429 | MS.gene96778:CDS |
| CACTCATCACTGTTCAACAT+AGG | 0.604772 | 4.3:+28253604 | MS.gene96778:CDS |
| AATATGCAAGGATGGTGAGA+TGG | 0.607005 | 4.3:+28254995 | MS.gene96778:CDS |
| ACACTGATGATAGGCAAGCA+TGG | 0.608815 | 4.3:+28256535 | MS.gene96778:CDS |
| TAATAATAGATGCAAGAACA+GGG | 0.609839 | 4.3:-28258442 | None:intergenic |
| CGGACAACATTCAAAGCTGG+TGG | 0.611952 | 4.3:+28256197 | MS.gene96778:CDS |
| GGTAGAAAATCAACTTCGGA+AGG | 0.612407 | 4.3:+28259026 | MS.gene96778:CDS |
| GGTGCTGGCGATCTTTCATA+CGG | 0.612729 | 4.3:+28253715 | MS.gene96778:CDS |
| ACTTGGAAATTACTTGTCTG+AGG | 0.615031 | 4.3:-28257132 | None:intergenic |
| TGGAGTGATTTGTCATAAGG+GGG | 0.616687 | 4.3:-28259715 | None:intergenic |
| TCGCATTCACAATACTCTCA+AGG | 0.617271 | 4.3:+28259562 | MS.gene96778:CDS |
| TAATCGTTGATTATCCCGAT+AGG | 0.622726 | 4.3:+28255735 | MS.gene96778:CDS |
| ACCGCCGAGAAGAGATTGTG+TGG | 0.626583 | 4.3:-28253695 | None:intergenic |
| ACTTCTTGGAGGTGATGAGG+AGG | 0.630481 | 4.3:+28258984 | MS.gene96778:CDS |
| ATACACTATTATGGAAAACA+TGG | 0.630647 | 4.3:+28258918 | MS.gene96778:CDS |
| GAGACAAGTAGGAATGGAGG+CGG | 0.631254 | 4.3:+28258943 | MS.gene96778:CDS |
| GTATCCCAATAGCAGCTGCA+AGG | 0.631753 | 4.3:-28258575 | None:intergenic |
| ACTCAAGACCATGTTTACAA+AGG | 0.633854 | 4.3:-28253765 | None:intergenic |
| GTTAAGTACAGTCATGGATG+GGG | 0.634457 | 4.3:+28254914 | MS.gene96778:CDS |
| TTTCAAGGATCAAATGTCAG+AGG | 0.635912 | 4.3:+28254424 | MS.gene96778:CDS |
| AGCTGCTATTGGGATACCTG+TGG | 0.636994 | 4.3:+28258581 | MS.gene96778:CDS |
| CATCGGACAAGACTTTCAGA+GGG | 0.638744 | 4.3:-28255644 | None:intergenic |
| GTCACCAAGATAGACAAGAA+GGG | 0.640544 | 4.3:-28255537 | None:intergenic |
| TGAAATGAAACAGATTGATG+AGG | 0.640549 | 4.3:+28254301 | MS.gene96778:intron |
| CATGTTGACAGATGGGACTG+GGG | 0.641737 | 4.3:+28256413 | MS.gene96778:CDS |
| CCTCGGTAGAAAATCAACTT+CGG | 0.642262 | 4.3:+28259022 | MS.gene96778:CDS |
| TGGAAATTACTTGTCTGAGG+TGG | 0.648039 | 4.3:-28257129 | None:intergenic |
| GTAGAAGCAGATCCATTGAA+GGG | 0.650235 | 4.3:+28256698 | MS.gene96778:CDS |
| TAGTGACCATGTTGACAGAT+GGG | 0.652904 | 4.3:+28256406 | MS.gene96778:CDS |
| GAGAAGTTAGAACTTCGGGA+TGG | 0.655185 | 4.3:+28259775 | MS.gene96778:CDS |
| TGAAGGGAAGCAGAAACCAA+AGG | 0.658879 | 4.3:+28256714 | MS.gene96778:CDS |
| GGGAAGCAGAAACCAAAGGA+AGG | 0.661505 | 4.3:+28256718 | MS.gene96778:CDS |
| ATTAGAAGATATGATAGTGG+CGG | 0.665563 | 4.3:-28257291 | None:intergenic |
| TACAAACCAGGGAAAACGCG+AGG | 0.666974 | 4.3:-28254530 | None:intergenic |
| GCTGAGACAAGTAGGAATGG+AGG | 0.667699 | 4.3:+28258940 | MS.gene96778:CDS |
| ATAGTGACCATGTTGACAGA+TGG | 0.668208 | 4.3:+28256405 | MS.gene96778:CDS |
| TGAAATTTCAAGATCAAACG+TGG | 0.669365 | 4.3:+28258465 | MS.gene96778:CDS |
| AGGGCATGGAGAAACTGGAG+AGG | 0.675629 | 4.3:-28255518 | None:intergenic |
| CATCTACAGACCTGTATCGG+AGG | 0.676557 | 4.3:-28257320 | None:intergenic |
| ATGTTGACAGATGGGACTGG+GGG | 0.677133 | 4.3:+28256414 | MS.gene96778:CDS |
| TTGAACGAAATGGGTCATCG+AGG | 0.686113 | 4.3:+28253898 | MS.gene96778:CDS |
| TGAGGAGGAAGACAGATCTG+TGG | 0.687455 | 4.3:+28258999 | MS.gene96778:CDS |
| AATAATAGATGCAAGAACAG+GGG | 0.695684 | 4.3:-28258441 | None:intergenic |
| TCGGACAAGACTTTCAGAGG+GGG | 0.715598 | 4.3:-28255642 | None:intergenic |
| AAGCATGGATCAATGCCACA+CGG | 0.717438 | 4.3:+28256550 | MS.gene96778:CDS |
| AATAGTGTATACAAGCTCAG+AGG | 0.720700 | 4.3:-28258905 | None:intergenic |
| ATCGGACAAGACTTTCAGAG+GGG | 0.728009 | 4.3:-28255643 | None:intergenic |
| GCCACACAATCTCTTCTCGG+CGG | 0.741154 | 4.3:+28253694 | MS.gene96778:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATATAATAAATAT+TGG | - | chr4.3:28259357-28259376 | None:intergenic | 0.0% |
| !! | TTTCATAAAAAAAAAAATCA+TGG | - | chr4.3:28254286-28254305 | None:intergenic | 10.0% |
| !! | AATGAAAATATAGTGTAAAA+AGG | - | chr4.3:28257566-28257585 | None:intergenic | 15.0% |
| !! | ACATAAAAAATATCAAACAT+GGG | - | chr4.3:28254797-28254816 | None:intergenic | 15.0% |
| !! | ACATATATAATACTTATAAC+TGG | + | chr4.3:28255479-28255498 | MS.gene96778:intron | 15.0% |
| !! | GTTAAATAATGTACATTAAA+AGG | - | chr4.3:28259159-28259178 | None:intergenic | 15.0% |
| !! | TCTAATTGAAGATTATTTAT+TGG | - | chr4.3:28257488-28257507 | None:intergenic | 15.0% |
| !! | TCTGTTTAATTATAATCTTT+GGG | + | chr4.3:28255264-28255283 | MS.gene96778:intron | 15.0% |
| !!! | AAACTTCAAATTTTTCTAAT+CGG | + | chr4.3:28254822-28254841 | MS.gene96778:intron | 15.0% |
| !!! | AATTTTTTTGGTAAACTTTT+AGG | + | chr4.3:28258666-28258685 | MS.gene96778:intron | 15.0% |
| !!! | ATATGTATTGATAGATTATT+AGG | - | chr4.3:28258494-28258513 | None:intergenic | 15.0% |
| !!! | TGAATTTTTATTGATTTCTT+TGG | + | chr4.3:28253862-28253881 | MS.gene96778:intron | 15.0% |
| !!! | TTATGTCTTATTAAATTGAA+TGG | + | chr4.3:28255828-28255847 | MS.gene96778:intron | 15.0% |
| !!! | TTTTATGTTAATGTTAATGA+GGG | + | chr4.3:28254568-28254587 | MS.gene96778:intron | 15.0% |
| !! | AAAGATGCTTATATTTATTC+AGG | - | chr4.3:28259304-28259323 | None:intergenic | 20.0% |
| !! | AACGATTATCTCAAATAATT+TGG | - | chr4.3:28255723-28255742 | None:intergenic | 20.0% |
| !! | AAGATGCTTATATTTATTCA+GGG | - | chr4.3:28259303-28259322 | None:intergenic | 20.0% |
| !! | AATGTACATTATTTAACCTT+TGG | + | chr4.3:28259162-28259181 | MS.gene96778:intron | 20.0% |
| !! | ACAAGATTCTATAATCAAAA+TGG | - | chr4.3:28254630-28254649 | None:intergenic | 20.0% |
| !! | ATAATAGTTGAAACTATCTT+TGG | - | chr4.3:28257185-28257204 | None:intergenic | 20.0% |
| !! | ATGAACCTAAGTATAATATA+CGG | - | chr4.3:28257440-28257459 | None:intergenic | 20.0% |
| !! | ATTAAACAGATGTTTACATA+TGG | - | chr4.3:28256992-28257011 | None:intergenic | 20.0% |
| !! | CACATAAAAAATATCAAACA+TGG | - | chr4.3:28254798-28254817 | None:intergenic | 20.0% |
| !! | CTAAAAAAAAACTAATTCTC+TGG | + | chr4.3:28256058-28256077 | MS.gene96778:intron | 20.0% |
| !! | CTCTGTTTAATTATAATCTT+TGG | + | chr4.3:28255263-28255282 | MS.gene96778:intron | 20.0% |
| !! | GAATTTGTAGTAATTCTTAA+TGG | + | chr4.3:28259186-28259205 | MS.gene96778:intron | 20.0% |
| !! | TACCAAAAAAATTATACAAG+AGG | - | chr4.3:28258659-28258678 | None:intergenic | 20.0% |
| !! | TTATTTGAATTAGTACCTTA+AGG | - | chr4.3:28256880-28256899 | None:intergenic | 20.0% |
| !! | TTTAATTATAATCTTTGGGT+GGG | + | chr4.3:28255268-28255287 | MS.gene96778:intron | 20.0% |
| !! | TTTACACCTTTATAAATGTT+AGG | + | chr4.3:28259629-28259648 | MS.gene96778:intron | 20.0% |
| !!! | AAATAGTGAAATTTTCAGTT+GGG | - | chr4.3:28253829-28253848 | None:intergenic | 20.0% |
| !!! | AATAAATTTTTGGATAAGCA+AGG | + | chr4.3:28258620-28258639 | MS.gene96778:CDS | 20.0% |
| !!! | AATAACTAGAATTCTTGTTT+TGG | - | chr4.3:28258786-28258805 | None:intergenic | 20.0% |
| !!! | ACTCAAATCATTTTAGTTTT+AGG | + | chr4.3:28257624-28257643 | MS.gene96778:intron | 20.0% |
| !!! | ATCTAACATGTATTGTTTTA+TGG | + | chr4.3:28259489-28259508 | MS.gene96778:intron | 20.0% |
| !!! | CTTTTATGTTAATGTTAATG+AGG | + | chr4.3:28254567-28254586 | MS.gene96778:intron | 20.0% |
| !!! | TAAACAGGAGAATAAATTTT+TGG | + | chr4.3:28258610-28258629 | MS.gene96778:CDS | 20.0% |
| !!! | TACACTATATTTTCATTTTC+AGG | + | chr4.3:28257569-28257588 | MS.gene96778:intron | 20.0% |
| !!! | TAGATAAACAAATGTTTTCA+CGG | + | chr4.3:28255451-28255470 | MS.gene96778:intron | 20.0% |
| !!! | TGCTATATTTTTACTACTAA+AGG | + | chr4.3:28255145-28255164 | MS.gene96778:CDS | 20.0% |
| !!! | TTACTCAAATTTTGGAATTT+TGG | - | chr4.3:28257730-28257749 | None:intergenic | 20.0% |
| !!! | TTTAGCTCTAATTTAGAAAT+AGG | + | chr4.3:28254705-28254724 | MS.gene96778:intron | 20.0% |
| ! | AAACTACAGTATTAAGTAAC+AGG | - | chr4.3:28257600-28257619 | None:intergenic | 25.0% |
| ! | AAATACAGGATATTTGAACT+TGG | - | chr4.3:28257152-28257171 | None:intergenic | 25.0% |
| ! | AAATTGATGTTTCTTCTCAA+TGG | + | chr4.3:28256645-28256664 | MS.gene96778:intron | 25.0% |
| ! | AATTACTACAAATTCACCAA+AGG | - | chr4.3:28259181-28259200 | None:intergenic | 25.0% |
| ! | AATTGATGTTTCTTCTCAAT+GGG | + | chr4.3:28256646-28256665 | MS.gene96778:intron | 25.0% |
| ! | ACAAGTAACAAAATACCTAT+CGG | - | chr4.3:28255753-28255772 | None:intergenic | 25.0% |
| ! | ATAATAATAGATGCAAGAAC+AGG | - | chr4.3:28258446-28258465 | None:intergenic | 25.0% |
| ! | ATACACTATTATGGAAAACA+TGG | + | chr4.3:28258918-28258937 | MS.gene96778:CDS | 25.0% |
| ! | ATAGCACTATAAAATGCTAA+AGG | - | chr4.3:28257906-28257925 | None:intergenic | 25.0% |
| ! | ATTAAGCAAAACTTTCAATC+AGG | - | chr4.3:28254773-28254792 | None:intergenic | 25.0% |
| ! | ATTAATGACAGTAGAAAACA+TGG | - | chr4.3:28257771-28257790 | None:intergenic | 25.0% |
| ! | ATTATGCTCAATGATCTAAT+TGG | + | chr4.3:28257063-28257082 | MS.gene96778:CDS | 25.0% |
| ! | CACACGGTATATTTATAATA+TGG | + | chr4.3:28256566-28256585 | MS.gene96778:intron | 25.0% |
| ! | CATATCTAGTCAAACAAAAA+AGG | - | chr4.3:28256914-28256933 | None:intergenic | 25.0% |
| ! | CATATTATAAATATACCGTG+TGG | - | chr4.3:28256568-28256587 | None:intergenic | 25.0% |
| ! | CATTCATTTACAGTATGAAA+AGG | - | chr4.3:28254598-28254617 | None:intergenic | 25.0% |
| ! | CGTTTATGAAATTCAAAATC+TGG | + | chr4.3:28255174-28255193 | MS.gene96778:intron | 25.0% |
| ! | CTATCATATCTTCTAATTTC+TGG | + | chr4.3:28257297-28257316 | MS.gene96778:CDS | 25.0% |
| ! | CTTTAATAGTAGAAACGTAT+TGG | - | chr4.3:28256290-28256309 | None:intergenic | 25.0% |
| ! | GAAATTAGAAGATATGATAG+TGG | - | chr4.3:28257297-28257316 | None:intergenic | 25.0% |
| ! | GTTTAATTATAATCTTTGGG+TGG | + | chr4.3:28255267-28255286 | MS.gene96778:intron | 25.0% |
| ! | TAATAATAGATGCAAGAACA+GGG | - | chr4.3:28258445-28258464 | None:intergenic | 25.0% |
| ! | TCATGATGTATCTCAAAATA+AGG | + | chr4.3:28254944-28254963 | MS.gene96778:CDS | 25.0% |
| ! | TCCATGTAAAATTAACCATA+TGG | - | chr4.3:28254674-28254693 | None:intergenic | 25.0% |
| ! | TGAAAAAGGAAAAATATGCA+AGG | + | chr4.3:28254983-28255002 | MS.gene96778:CDS | 25.0% |
| ! | TGAACCTAAGTATAATATAC+GGG | - | chr4.3:28257439-28257458 | None:intergenic | 25.0% |
| ! | TTATGGCAGAAATTTATCTT+GGG | + | chr4.3:28259506-28259525 | MS.gene96778:intron | 25.0% |
| ! | TTATTATCTCTTGCTCATTT+AGG | + | chr4.3:28258742-28258761 | MS.gene96778:intron | 25.0% |
| ! | TTCAAAATTTACTCAACTCA+AGG | - | chr4.3:28256015-28256034 | None:intergenic | 25.0% |
| ! | TTCTCGTTTATGTTTATTGA+AGG | + | chr4.3:28259424-28259443 | MS.gene96778:intron | 25.0% |
| ! | TTGCCTAAAACTAAAATGAT+TGG | - | chr4.3:28257630-28257649 | None:intergenic | 25.0% |
| ! | TTTATGGCAGAAATTTATCT+TGG | + | chr4.3:28259505-28259524 | MS.gene96778:intron | 25.0% |
| !! | AAATTTTGAACTCCAACAAT+AGG | + | chr4.3:28256025-28256044 | MS.gene96778:intron | 25.0% |
| !! | ACCATATGGTTAATTTTACA+TGG | + | chr4.3:28254670-28254689 | MS.gene96778:intron | 25.0% |
| !! | AGAAAAGCTTACTCAAATTT+TGG | - | chr4.3:28257738-28257757 | None:intergenic | 25.0% |
| !! | ATAAAAAGCTTTGTAGTTGT+TGG | - | chr4.3:28259738-28259757 | None:intergenic | 25.0% |
| !! | ATTTTCAGAAAACAGTAAAC+TGG | + | chr4.3:28255046-28255065 | MS.gene96778:CDS | 25.0% |
| !! | CAAATAGTGAAATTTTCAGT+TGG | - | chr4.3:28253830-28253849 | None:intergenic | 25.0% |
| !! | GAAGAAATTCAAGAGAATTT+TGG | + | chr4.3:28256495-28256514 | MS.gene96778:CDS | 25.0% |
| !! | GTATTGGTGTAATATATCAT+TGG | - | chr4.3:28256274-28256293 | None:intergenic | 25.0% |
| !!! | AAAATGATTGGCTTAAGATA+AGG | - | chr4.3:28257663-28257682 | None:intergenic | 25.0% |
| !!! | AAAGGCAAATTTTGGTAAAA+AGG | - | chr4.3:28257219-28257238 | None:intergenic | 25.0% |
| !!! | AAGCCAATCATTTTAGTTTT+AGG | + | chr4.3:28257669-28257688 | MS.gene96778:intron | 25.0% |
| !!! | ATGATTTTAACACTGATGAT+AGG | + | chr4.3:28256526-28256545 | MS.gene96778:CDS | 25.0% |
| !!! | ATTATGTTTTTGCTTTCAGT+TGG | + | chr4.3:28258541-28258560 | MS.gene96778:intron | 25.0% |
| !!! | TGCATTGGTATTTTAAAAGA+AGG | + | chr4.3:28254883-28254902 | MS.gene96778:CDS | 25.0% |
| !!! | TTAAAAGGACTCTAAAATGT+TGG | - | chr4.3:28259144-28259163 | None:intergenic | 25.0% |
| !!! | TTATTGATTTCTTTGGTTGT+AGG | + | chr4.3:28253869-28253888 | MS.gene96778:intron | 25.0% |
| AAAACCCTTTCTTTGTTCAA+GGG | - | chr4.3:28259612-28259631 | None:intergenic | 30.0% | |
| AAACATGTTTAGTCACTTAG+AGG | + | chr4.3:28255872-28255891 | MS.gene96778:intron | 30.0% | |
| AAACCAACAAAATCAGCATA+AGG | - | chr4.3:28253942-28253961 | None:intergenic | 30.0% | |
| AAACTCTACTTGAGTTTACA+TGG | - | chr4.3:28257863-28257882 | None:intergenic | 30.0% | |
| AAACTTTGTCTTGAATACAC+CGG | + | chr4.3:28256177-28256196 | MS.gene96778:CDS | 30.0% | |
| AAAGGAAAAATATGCAAGGA+TGG | + | chr4.3:28254987-28255006 | MS.gene96778:CDS | 30.0% | |
| AACATGTTTAGTCACTTAGA+GGG | + | chr4.3:28255873-28255892 | MS.gene96778:intron | 30.0% | |
| AAGTCTTGGATTTACTTCAA+TGG | + | chr4.3:28255103-28255122 | MS.gene96778:CDS | 30.0% | |
| AATAATAGATGCAAGAACAG+GGG | - | chr4.3:28258444-28258463 | None:intergenic | 30.0% | |
| ACTGAATTAATCACATGTGT+CGG | + | chr4.3:28254083-28254102 | MS.gene96778:intron | 30.0% | |
| ACTTATAACTGGAATCATTC+AGG | + | chr4.3:28255490-28255509 | MS.gene96778:intron | 30.0% | |
| ATCTCAAAATAAGGATGACA+TGG | + | chr4.3:28254953-28254972 | MS.gene96778:CDS | 30.0% | |
| ATGAAACACTGCAAGATTTA+AGG | + | chr4.3:28255693-28255712 | MS.gene96778:CDS | 30.0% | |
| ATTGAAGGATTCAATCACAA+GGG | + | chr4.3:28259439-28259458 | MS.gene96778:intron | 30.0% | |
| CAAGTAACAAAATACCTATC+GGG | - | chr4.3:28255752-28255771 | None:intergenic | 30.0% | |
| CAAGTATCATCAAAGAGAAA+AGG | - | chr4.3:28256132-28256151 | None:intergenic | 30.0% | |
| CATTTGTTTATCTAAAGAGC+TGG | - | chr4.3:28255445-28255464 | None:intergenic | 30.0% | |
| GACATGGATTTAGATGAAAA+AGG | + | chr4.3:28254969-28254988 | MS.gene96778:CDS | 30.0% | |
| GATTACAACTGCTTAAGATA+AGG | - | chr4.3:28257708-28257727 | None:intergenic | 30.0% | |
| TAAAACCCTTTCTTTGTTCA+AGG | - | chr4.3:28259613-28259632 | None:intergenic | 30.0% | |
| TACCAATGCAATATAGCTAA+TGG | - | chr4.3:28254873-28254892 | None:intergenic | 30.0% | |
| TACCATTAGCTATATTGCAT+TGG | + | chr4.3:28254868-28254887 | MS.gene96778:intron | 30.0% | |
| TATACCCTTGAACAAAGAAA+GGG | + | chr4.3:28259605-28259624 | MS.gene96778:intron | 30.0% | |
| TATGGCAGAAATTTATCTTG+GGG | + | chr4.3:28259507-28259526 | MS.gene96778:intron | 30.0% | |
| TATTGAAGGATTCAATCACA+AGG | + | chr4.3:28259438-28259457 | MS.gene96778:intron | 30.0% | |
| TCTTACAATCTATTCAAAGC+TGG | + | chr4.3:28255361-28255380 | MS.gene96778:CDS | 30.0% | |
| TGAAATGAAACAGATTGATG+AGG | + | chr4.3:28254301-28254320 | MS.gene96778:intron | 30.0% | |
| TGAAATTTCAAGATCAAACG+TGG | + | chr4.3:28258465-28258484 | MS.gene96778:CDS | 30.0% | |
| TGAGCTTGTATACACTATTA+TGG | + | chr4.3:28258909-28258928 | MS.gene96778:CDS | 30.0% | |
| TGTGTGCCTAACATTTATAA+AGG | - | chr4.3:28259638-28259657 | None:intergenic | 30.0% | |
| TTCAGTGGAAAAAAAGTCTT+GGG | + | chr4.3:28258234-28258253 | MS.gene96778:CDS | 30.0% | |
| TTTCTACTATTAAAGCCCTA+AGG | + | chr4.3:28256295-28256314 | MS.gene96778:CDS | 30.0% | |
| ! | AATCTTTTGCCTTATGATGA+TGG | + | chr4.3:28259381-28259400 | MS.gene96778:intron | 30.0% |
| ! | AATTTTCTAACAGAAAACCC+AGG | - | chr4.3:28255792-28255811 | None:intergenic | 30.0% |
| ! | AGGAAACTTTTGAACGAAAT+GGG | + | chr4.3:28253889-28253908 | MS.gene96778:intron | 30.0% |
| ! | CAACTACAAAGCTTTTTATC+TGG | + | chr4.3:28259739-28259758 | MS.gene96778:CDS | 30.0% |
| ! | GCATAATCTCACATTTTTGT+AGG | - | chr4.3:28257050-28257069 | None:intergenic | 30.0% |
| ! | TAAACATGTTTCTGTCAATG+CGG | - | chr4.3:28255863-28255882 | None:intergenic | 30.0% |
| ! | TAGGAAACTTTTGAACGAAA+TGG | + | chr4.3:28253888-28253907 | MS.gene96778:intron | 30.0% |
| !! | AAATTTTTGGATAAGCAAGG+TGG | + | chr4.3:28258623-28258642 | MS.gene96778:intron | 30.0% |
| !! | AATTTTTGGATAAGCAAGGT+GGG | + | chr4.3:28258624-28258643 | MS.gene96778:intron | 30.0% |
| !! | AGTTTGTTAATGCCTATTGT+TGG | - | chr4.3:28256040-28256059 | None:intergenic | 30.0% |
| !! | ATTAGAAGATATGATAGTGG+CGG | - | chr4.3:28257294-28257313 | None:intergenic | 30.0% |
| !! | CTTATGATGATGGTTACTTT+GGG | + | chr4.3:28259391-28259410 | MS.gene96778:intron | 30.0% |
| !! | TACTGTTTTCTGAAAATCGA+CGG | - | chr4.3:28255043-28255062 | None:intergenic | 30.0% |
| !! | TTGGTATTTTAAAAGAAGGC+TGG | + | chr4.3:28254887-28254906 | MS.gene96778:CDS | 30.0% |
| !! | TTTGTTGGTTTGAACAAGAA+TGG | + | chr4.3:28253951-28253970 | MS.gene96778:CDS | 30.0% |
| !!! | AGTTTTAAGTCTTCAATTGC+AGG | - | chr4.3:28256162-28256181 | None:intergenic | 30.0% |
| !!! | ATGGTTTTTTGACAACGAAA+TGG | + | chr4.3:28259205-28259224 | MS.gene96778:intron | 30.0% |
| !!! | GGCCTCTTGTATAATTTTTT+TGG | + | chr4.3:28258654-28258673 | MS.gene96778:intron | 30.0% |
| !!! | TTGTTTTTGCAGATACACTT+CGG | + | chr4.3:28257015-28257034 | MS.gene96778:intron | 30.0% |
| !!! | TTTTTTTCCACTGAAGCTTA+CGG | - | chr4.3:28258229-28258248 | None:intergenic | 30.0% |
| AAAAAACCGCTTACAAACCA+GGG | - | chr4.3:28254544-28254563 | None:intergenic | 35.0% | |
| AATAGTGTATACAAGCTCAG+AGG | - | chr4.3:28258908-28258927 | None:intergenic | 35.0% | |
| AATGACAGTAGAAAACATGG+TGG | - | chr4.3:28257768-28257787 | None:intergenic | 35.0% | |
| ACCTTACCTCTAAGTATCAA+TGG | + | chr4.3:28254477-28254496 | MS.gene96778:CDS | 35.0% | |
| ACTAACAAGTACAAACCACA+AGG | - | chr4.3:28254174-28254193 | None:intergenic | 35.0% | |
| ACTCAAGACCATGTTTACAA+AGG | - | chr4.3:28253768-28253787 | None:intergenic | 35.0% | |
| ACTTGGAAATTACTTGTCTG+AGG | - | chr4.3:28257135-28257154 | None:intergenic | 35.0% | |
| AGAAGAATTGCGATTGTTCT+TGG | + | chr4.3:28255918-28255937 | MS.gene96778:intron | 35.0% | |
| AGGAGAAAGATAGAACTGTA+AGG | - | chr4.3:28258353-28258372 | None:intergenic | 35.0% | |
| AGTAAACTGGTGAAGAACAT+TGG | + | chr4.3:28255059-28255078 | MS.gene96778:CDS | 35.0% | |
| AGTTAAGTACAGTCATGGAT+GGG | + | chr4.3:28254913-28254932 | MS.gene96778:CDS | 35.0% | |
| ATAGTGTAAAAAGGAGTCGT+TGG | - | chr4.3:28257557-28257576 | None:intergenic | 35.0% | |
| ATCTATTCAAAGCTGGATAC+AGG | + | chr4.3:28255368-28255387 | MS.gene96778:CDS | 35.0% | |
| CAATACTCTCAAGGTAAGAA+TGG | + | chr4.3:28259571-28259590 | MS.gene96778:intron | 35.0% | |
| CATCAATTTCATAACCTAGC+AGG | - | chr4.3:28256634-28256653 | None:intergenic | 35.0% | |
| CCAAAGTAACCATCATCATA+AGG | - | chr4.3:28259393-28259412 | None:intergenic | 35.0% | |
| CCAATAAGGGATTACTTAAG+AGG | + | chr4.3:28256360-28256379 | MS.gene96778:CDS | 35.0% | |
| CCATGCTTTACAATCTTTCA+AGG | + | chr4.3:28254409-28254428 | MS.gene96778:CDS | 35.0% | |
| CCATTGGACATGACAAAATT+AGG | - | chr4.3:28258373-28258392 | None:intergenic | 35.0% | |
| CCTCTTAAGTAATCCCTTAT+TGG | - | chr4.3:28256363-28256382 | None:intergenic | 35.0% | |
| CCTTGAAAGATTGTAAAGCA+TGG | - | chr4.3:28254412-28254431 | None:intergenic | 35.0% | |
| CGTTCATATCTATGCTTCAT+AGG | - | chr4.3:28254199-28254218 | None:intergenic | 35.0% | |
| CTATACCCTTGAACAAAGAA+AGG | + | chr4.3:28259604-28259623 | MS.gene96778:intron | 35.0% | |
| CTCAAGACCATGTTTACAAA+GGG | - | chr4.3:28253767-28253786 | None:intergenic | 35.0% | |
| CTCATTTAGGAAACTTCTGT+TGG | + | chr4.3:28258755-28258774 | MS.gene96778:intron | 35.0% | |
| CTTCAGTGGAAAAAAAGTCT+TGG | + | chr4.3:28258233-28258252 | MS.gene96778:CDS | 35.0% | |
| GACATACTTGGAATGATTGT+TGG | + | chr4.3:28256743-28256762 | MS.gene96778:CDS | 35.0% | |
| GGAATGATTGTTGGCATAAT+TGG | + | chr4.3:28256752-28256771 | MS.gene96778:CDS | 35.0% | |
| GGAGAAAGATAGAACTGTAA+GGG | - | chr4.3:28258352-28258371 | None:intergenic | 35.0% | |
| GTAGACCAAATCAGAAAGAA+CGG | - | chr4.3:28256612-28256631 | None:intergenic | 35.0% | |
| TAAGGGATTACTTAAGAGGA+AGG | + | chr4.3:28256364-28256383 | MS.gene96778:CDS | 35.0% | |
| TACCTGTGGATGTATTAAAC+AGG | + | chr4.3:28258595-28258614 | MS.gene96778:CDS | 35.0% | |
| TAGTGTAAAAAGGAGTCGTT+GGG | - | chr4.3:28257556-28257575 | None:intergenic | 35.0% | |
| TATGGTGTTCGTTCATTCAA+TGG | - | chr4.3:28259267-28259286 | None:intergenic | 35.0% | |
| TCCATTGATACTTAGAGGTA+AGG | - | chr4.3:28254481-28254500 | None:intergenic | 35.0% | |
| TGAAGACAATGCAATATCCA+TGG | + | chr4.3:28257259-28257278 | MS.gene96778:CDS | 35.0% | |
| TTCCAGATCTTATTGTCTAG+CGG | + | chr4.3:28258288-28258307 | MS.gene96778:intron | 35.0% | |
| TTGGCAAAGATCACAAATAC+AGG | - | chr4.3:28257166-28257185 | None:intergenic | 35.0% | |
| TTTATCTAAAGAGCTGGCAA+AGG | - | chr4.3:28255439-28255458 | None:intergenic | 35.0% | |
| TTTCAAGGATCAAATGTCAG+AGG | + | chr4.3:28254424-28254443 | MS.gene96778:CDS | 35.0% | |
| TTTCAAGGATTTCGTGAAGT+TGG | - | chr4.3:28253654-28253673 | None:intergenic | 35.0% | |
| TTTCACCGTTCTTTCTGATT+TGG | + | chr4.3:28256604-28256623 | MS.gene96778:intron | 35.0% | |
| TTTCATCTACAGACCTGTAT+CGG | - | chr4.3:28257326-28257345 | None:intergenic | 35.0% | |
| ! | CCATTTTCTCAAAGTCTTAG+AGG | + | chr4.3:28253801-28253820 | MS.gene96778:CDS | 35.0% |
| ! | CCTAATTTTGTCATGTCCAA+TGG | + | chr4.3:28258370-28258389 | MS.gene96778:intron | 35.0% |
| ! | CTGACTTTGAAGAGAATTAC+AGG | + | chr4.3:28258124-28258143 | MS.gene96778:intron | 35.0% |
| ! | GTTGGAGTGATTTGTCATAA+GGG | - | chr4.3:28259720-28259739 | None:intergenic | 35.0% |
| ! | GTTTTACTCTTCACTACACA+TGG | - | chr4.3:28259245-28259264 | None:intergenic | 35.0% |
| ! | TAATCGTTGATTATCCCGAT+AGG | + | chr4.3:28255735-28255754 | MS.gene96778:CDS | 35.0% |
| ! | TGTTGGAGTGATTTGTCATA+AGG | - | chr4.3:28259721-28259740 | None:intergenic | 35.0% |
| ! | TTCTTTGTTCAAGGGTATAG+AGG | - | chr4.3:28259604-28259623 | None:intergenic | 35.0% |
| ! | TTGGAGTGATTTGTCATAAG+GGG | - | chr4.3:28259719-28259738 | None:intergenic | 35.0% |
| !! | CCTCTAAGACTTTGAGAAAA+TGG | - | chr4.3:28253804-28253823 | None:intergenic | 35.0% |
| !! | CCTTATGATGATGGTTACTT+TGG | + | chr4.3:28259390-28259409 | MS.gene96778:intron | 35.0% |
| !! | GTATTTTAAAAGAAGGCTGG+AGG | + | chr4.3:28254890-28254909 | MS.gene96778:CDS | 35.0% |
| !! | TGCTTTGGAAGAAATCTCTT+TGG | + | chr4.3:28254349-28254368 | MS.gene96778:CDS | 35.0% |
| !!! | GGAGAAGTGTCTGTTAATTT+TGG | + | chr4.3:28254385-28254404 | MS.gene96778:CDS | 35.0% |
| !!! | GGCATAATTTTGAAGCAGAA+AGG | + | chr4.3:28254450-28254469 | MS.gene96778:CDS | 35.0% |
| !!! | GTTCCTTATGCTGATTTTGT+TGG | + | chr4.3:28253936-28253955 | MS.gene96778:CDS | 35.0% |
| !!! | TTTTTTCCACTGAAGCTTAC+GGG | - | chr4.3:28258228-28258247 | None:intergenic | 35.0% |
| AAAAAGTCTTGGGACTGTCA+AGG | + | chr4.3:28258244-28258263 | MS.gene96778:CDS | 40.0% | |
| AAAACATGGCTGAGACAAGT+AGG | + | chr4.3:28258932-28258951 | MS.gene96778:CDS | 40.0% | |
| AAATTTGCCTTTGCCCTCTT+AGG | + | chr4.3:28257227-28257246 | MS.gene96778:intron | 40.0% | |
| AAGTCAGTCACAGAACTAAG+TGG | - | chr4.3:28258111-28258130 | None:intergenic | 40.0% | |
| AAGTTATAGTTCTCGCTACC+CGG | + | chr4.3:28257413-28257432 | MS.gene96778:intron | 40.0% | |
| AATATGCAAGGATGGTGAGA+TGG | + | chr4.3:28254995-28255014 | MS.gene96778:CDS | 40.0% | |
| AATCTTGTCGACAATGCTCT+TGG | + | chr4.3:28254642-28254661 | MS.gene96778:intron | 40.0% | |
| AATTCTTCTCCAACTACTGC+AGG | - | chr4.3:28255907-28255926 | None:intergenic | 40.0% | |
| ACTTCTCATAGAGTTGTGTC+TGG | - | chr4.3:28254246-28254265 | None:intergenic | 40.0% | |
| AGACACAACTCTATGAGAAG+TGG | + | chr4.3:28254245-28254264 | MS.gene96778:intron | 40.0% | |
| AGCAGAGCTAATTGAACTTC+TGG | - | chr4.3:28257941-28257960 | None:intergenic | 40.0% | |
| AGGATCAAATGTCAGAGGAA+AGG | + | chr4.3:28254429-28254448 | MS.gene96778:CDS | 40.0% | |
| AGTCACCAAGATAGACAAGA+AGG | - | chr4.3:28255541-28255560 | None:intergenic | 40.0% | |
| ATAGTGACCATGTTGACAGA+TGG | + | chr4.3:28256405-28256424 | MS.gene96778:CDS | 40.0% | |
| ATCAGAGAGAAGCTTGTCAA+CGG | - | chr4.3:28258174-28258193 | None:intergenic | 40.0% | |
| CAAAAAACCGCTTACAAACC+AGG | - | chr4.3:28254545-28254564 | None:intergenic | 40.0% | |
| CAAAGGAAGGTTGACATACT+TGG | + | chr4.3:28256731-28256750 | MS.gene96778:CDS | 40.0% | |
| CAACTGCTTAAGATAAGGCA+AGG | - | chr4.3:28257703-28257722 | None:intergenic | 40.0% | |
| CAAGTATGTCAACCTTCCTT+TGG | - | chr4.3:28256733-28256752 | None:intergenic | 40.0% | |
| CACTCATCACTGTTCAACAT+AGG | + | chr4.3:28253604-28253623 | MS.gene96778:CDS | 40.0% | |
| CCTAAGTATAATATACGGGC+CGG | - | chr4.3:28257435-28257454 | None:intergenic | 40.0% | |
| CCTCGGTAGAAAATCAACTT+CGG | + | chr4.3:28259022-28259041 | MS.gene96778:CDS | 40.0% | |
| CTAAGTATAATATACGGGCC+GGG | - | chr4.3:28257434-28257453 | None:intergenic | 40.0% | |
| CTCCTGTTTAATACATCCAC+AGG | - | chr4.3:28258600-28258619 | None:intergenic | 40.0% | |
| CTCTGTTCAACTCTTCAAGA+AGG | - | chr4.3:28256473-28256492 | None:intergenic | 40.0% | |
| CTGAGGAGAAGTTAGAACTT+CGG | + | chr4.3:28259770-28259789 | MS.gene96778:CDS | 40.0% | |
| GAAGAAATTGCAAGAGACTG+AGG | - | chr4.3:28255213-28255232 | None:intergenic | 40.0% | |
| GACAGTCCATTGATACTTAG+AGG | - | chr4.3:28254486-28254505 | None:intergenic | 40.0% | |
| GAGTTAAGTACAGTCATGGA+TGG | + | chr4.3:28254912-28254931 | MS.gene96778:CDS | 40.0% | |
| GCTAGACAATAAGATCTGGA+AGG | - | chr4.3:28258289-28258308 | None:intergenic | 40.0% | |
| GGAGTTGCAGTTTGAAGATA+GGG | + | chr4.3:28258400-28258419 | MS.gene96778:CDS | 40.0% | |
| GGTAGAAAATCAACTTCGGA+AGG | + | chr4.3:28259026-28259045 | MS.gene96778:CDS | 40.0% | |
| GTAGAAGCAGATCCATTGAA+GGG | + | chr4.3:28256698-28256717 | MS.gene96778:CDS | 40.0% | |
| GTCACCAAGATAGACAAGAA+GGG | - | chr4.3:28255540-28255559 | None:intergenic | 40.0% | |
| GTTAAGTACAGTCATGGATG+GGG | + | chr4.3:28254914-28254933 | MS.gene96778:CDS | 40.0% | |
| GTTCACACCCTTTGTAAACA+TGG | + | chr4.3:28253757-28253776 | MS.gene96778:CDS | 40.0% | |
| GTTCTTGATCTCAGAAGTCT+TGG | + | chr4.3:28255089-28255108 | MS.gene96778:CDS | 40.0% | |
| TACCGCTAGACAATAAGATC+TGG | - | chr4.3:28258293-28258312 | None:intergenic | 40.0% | |
| TAGGTCAGTACTTTGTGCAA+TGG | + | chr4.3:28254724-28254743 | MS.gene96778:intron | 40.0% | |
| TAGTGACCATGTTGACAGAT+GGG | + | chr4.3:28256406-28256425 | MS.gene96778:CDS | 40.0% | |
| TCAGCAATGCAAAACATCTG+TGG | - | chr4.3:28259694-28259713 | None:intergenic | 40.0% | |
| TCGCATTCACAATACTCTCA+AGG | + | chr4.3:28259562-28259581 | MS.gene96778:CDS | 40.0% | |
| TGAAGCATAGATATGAACGC+CGG | + | chr4.3:28254200-28254219 | MS.gene96778:intron | 40.0% | |
| TGAGGAGAAGTTAGAACTTC+GGG | + | chr4.3:28259771-28259790 | MS.gene96778:CDS | 40.0% | |
| TGGAAATTACTTGTCTGAGG+TGG | - | chr4.3:28257132-28257151 | None:intergenic | 40.0% | |
| TGGAGTTGCAGTTTGAAGAT+AGG | + | chr4.3:28258399-28258418 | MS.gene96778:CDS | 40.0% | |
| TGTAGAAGCAGATCCATTGA+AGG | + | chr4.3:28256697-28256716 | MS.gene96778:CDS | 40.0% | |
| TTCAATGGATCTGCTTCTAC+AGG | - | chr4.3:28256698-28256717 | None:intergenic | 40.0% | |
| TTTATCTGGTCTAGTCTCTG+AGG | + | chr4.3:28259753-28259772 | MS.gene96778:CDS | 40.0% | |
| TTTCTAACAGAAAACCCAGG+AGG | - | chr4.3:28255789-28255808 | None:intergenic | 40.0% | |
| ! | AAGAGGGCAAAGGCAAATTT+TGG | - | chr4.3:28257227-28257246 | None:intergenic | 40.0% |
| ! | ACAGCATGACGATGATTTTG+GGG | - | chr4.3:28255609-28255628 | None:intergenic | 40.0% |
| ! | AGAAGAGGGTATAGCTTTCA+AGG | - | chr4.3:28253669-28253688 | None:intergenic | 40.0% |
| ! | CTCTTTGGAGAAACAGTATC+AGG | + | chr4.3:28254364-28254383 | MS.gene96778:CDS | 40.0% |
| ! | GACAGCATGACGATGATTTT+GGG | - | chr4.3:28255610-28255629 | None:intergenic | 40.0% |
| ! | GACTCATTTGTCTAACTTGC+AGG | + | chr4.3:28255296-28255315 | MS.gene96778:intron | 40.0% |
| ! | GCAAAAGTGTATGATGTAGC+GGG | + | chr4.3:28255318-28255337 | MS.gene96778:CDS | 40.0% |
| ! | GGCAAAAGTGTATGATGTAG+CGG | + | chr4.3:28255317-28255336 | MS.gene96778:intron | 40.0% |
| ! | GTACAAACACTTTTGCAGCA+TGG | + | chr4.3:28258694-28258713 | MS.gene96778:intron | 40.0% |
| ! | TGGAGTGATTTGTCATAAGG+GGG | - | chr4.3:28259718-28259737 | None:intergenic | 40.0% |
| ! | TTTTTCCACTGAAGCTTACG+GGG | - | chr4.3:28258227-28258246 | None:intergenic | 40.0% |
| !! | AATGGGCTTTTCCAAACAGA+TGG | + | chr4.3:28256663-28256682 | MS.gene96778:intron | 40.0% |
| !! | ACGTACTCTAGAACTCCTTA+AGG | + | chr4.3:28256862-28256881 | MS.gene96778:CDS | 40.0% |
| !! | AGCTACGAAAGTACTTCATC+AGG | + | chr4.3:28255566-28255585 | MS.gene96778:CDS | 40.0% |
| !! | ATGTAGCGGGAGATGATTTT+AGG | + | chr4.3:28255331-28255350 | MS.gene96778:CDS | 40.0% |
| !! | TGCTCTTGGTTTTCACCATA+TGG | + | chr4.3:28254656-28254675 | MS.gene96778:intron | 40.0% |
| AAAGACCTTGCAGCTGCTAT+TGG | + | chr4.3:28258570-28258589 | MS.gene96778:CDS | 45.0% | |
| AAATCATCGTCATGCTGTCC+TGG | + | chr4.3:28255611-28255630 | MS.gene96778:CDS | 45.0% | |
| AACGCCACACAATCTCTTCT+CGG | + | chr4.3:28253691-28253710 | MS.gene96778:CDS | 45.0% | |
| AAGACCTTGCAGCTGCTATT+GGG | + | chr4.3:28258571-28258590 | MS.gene96778:CDS | 45.0% | |
| AAGCATGGATCAATGCCACA+CGG | + | chr4.3:28256550-28256569 | MS.gene96778:CDS | 45.0% | |
| AATGCTCAGGAACTTCTTGG+AGG | + | chr4.3:28258973-28258992 | MS.gene96778:CDS | 45.0% | |
| ACACTGATGATAGGCAAGCA+TGG | + | chr4.3:28256535-28256554 | MS.gene96778:CDS | 45.0% | |
| AGCAGGATCTATCGTCCTTA+GGG | - | chr4.3:28256313-28256332 | None:intergenic | 45.0% | |
| ATAAGCAAGGTGGGTCTGTT+AGG | + | chr4.3:28258633-28258652 | MS.gene96778:intron | 45.0% | |
| ATCGGACAAGACTTTCAGAG+GGG | - | chr4.3:28255646-28255665 | None:intergenic | 45.0% | |
| ATGGCTGAGACAAGTAGGAA+TGG | + | chr4.3:28258937-28258956 | MS.gene96778:CDS | 45.0% | |
| CAAGATAGACAAGAAGGGCA+TGG | - | chr4.3:28255535-28255554 | None:intergenic | 45.0% | |
| CAGGGACTTCAGTTCTCTTA+TGG | - | chr4.3:28259285-28259304 | None:intergenic | 45.0% | |
| CATCGGACAAGACTTTCAGA+GGG | - | chr4.3:28255647-28255666 | None:intergenic | 45.0% | |
| CATGCCCTTCTTGTCTATCT+TGG | + | chr4.3:28255533-28255552 | MS.gene96778:CDS | 45.0% | |
| CCGGCCCGTATATTATACTT+AGG | + | chr4.3:28257432-28257451 | MS.gene96778:intron | 45.0% | |
| GAAGGAGATGACTGTGTATG+AGG | + | chr4.3:28259044-28259063 | MS.gene96778:CDS | 45.0% | |
| GACTGTCTCTTCTGTGCTTA+TGG | + | chr4.3:28254499-28254518 | MS.gene96778:CDS | 45.0% | |
| GAGAAGTTAGAACTTCGGGA+TGG | + | chr4.3:28259775-28259794 | MS.gene96778:CDS | 45.0% | |
| GAGTGTGCTGTGTAATGCTT+TGG | + | chr4.3:28254334-28254353 | MS.gene96778:CDS | 45.0% | |
| GGAGGAGTTAAGTACAGTCA+TGG | + | chr4.3:28254908-28254927 | MS.gene96778:CDS | 45.0% | |
| GTATAGCTTCCTGCAGTAGT+TGG | + | chr4.3:28255895-28255914 | MS.gene96778:intron | 45.0% | |
| GTCATGTCCAATGGTATAGC+TGG | + | chr4.3:28258379-28258398 | MS.gene96778:intron | 45.0% | |
| TAATTCGCAGCTTTCCTCCT+GGG | + | chr4.3:28255772-28255791 | MS.gene96778:intron | 45.0% | |
| TCAAGGTCAAAGCATACAGC+TGG | - | chr4.3:28255998-28256017 | None:intergenic | 45.0% | |
| TCAGAGAGAAGCTTGTCAAC+GGG | - | chr4.3:28258173-28258192 | None:intergenic | 45.0% | |
| TCTTCAAGAAGGCTATCTCC+AGG | - | chr4.3:28256462-28256481 | None:intergenic | 45.0% | |
| TGAAGGGAAGCAGAAACCAA+AGG | + | chr4.3:28256714-28256733 | MS.gene96778:CDS | 45.0% | |
| TGCAACTCCAGCTATACCAT+TGG | - | chr4.3:28258389-28258408 | None:intergenic | 45.0% | |
| TGCAAGAGACTGAGGAAAAC+TGG | - | chr4.3:28255205-28255224 | None:intergenic | 45.0% | |
| TGGTTTCTGCTTCCCTTCAA+TGG | - | chr4.3:28256713-28256732 | None:intergenic | 45.0% | |
| TTCAACCTCCACACCTAAGA+GGG | - | chr4.3:28257243-28257262 | None:intergenic | 45.0% | |
| TTGAACGAAATGGGTCATCG+AGG | + | chr4.3:28253898-28253917 | MS.gene96778:CDS | 45.0% | |
| TTGGGGATGCTCACAAACTT+TGG | + | chr4.3:28259524-28259543 | MS.gene96778:CDS | 45.0% | |
| ! | ACCTCTTACAGAAGGCATGT+CGG | - | chr4.3:28254136-28254155 | None:intergenic | 45.0% |
| ! | ATGCCTTCTGTAAGAGGTGT+CGG | + | chr4.3:28254138-28254157 | MS.gene96778:intron | 45.0% |
| ! | GAAATGGGTCATCGAGGTTT+TGG | + | chr4.3:28253904-28253923 | MS.gene96778:CDS | 45.0% |
| ! | GCTCACAAACTTTGGTAGCA+TGG | + | chr4.3:28259532-28259551 | MS.gene96778:CDS | 45.0% |
| ! | GGACAGCATGACGATGATTT+TGG | - | chr4.3:28255611-28255630 | None:intergenic | 45.0% |
| ! | TGCATTGACACAGAACCACA+AGG | + | chr4.3:28254025-28254044 | MS.gene96778:intron | 45.0% |
| !! | AGGCAGTTGGTGAACCAATA+AGG | + | chr4.3:28256346-28256365 | MS.gene96778:CDS | 45.0% |
| !! | AGTGGCGGCTATTTTATCCA+TGG | - | chr4.3:28257279-28257298 | None:intergenic | 45.0% |
| !! | CACCAGCTTTGAATGTTGTC+CGG | - | chr4.3:28256199-28256218 | None:intergenic | 45.0% |
| !! | CCGAAGTTGATTTTCTACCG+AGG | - | chr4.3:28259025-28259044 | None:intergenic | 45.0% |
| !! | CGGCTGTGTTTTTGTAACAG+GGG | + | chr4.3:28258854-28258873 | MS.gene96778:intron | 45.0% |
| !! | CGTTTTCCCTGGTTTGTAAG+CGG | + | chr4.3:28254535-28254554 | MS.gene96778:intron | 45.0% |
| !! | GATTGGCTTAAGATAAGGCG+AGG | - | chr4.3:28257658-28257677 | None:intergenic | 45.0% |
| !! | GCGGCTGTGTTTTTGTAACA+GGG | + | chr4.3:28258853-28258872 | MS.gene96778:intron | 45.0% |
| !! | GGCAGTTGGTGAACCAATAA+GGG | + | chr4.3:28256347-28256366 | MS.gene96778:CDS | 45.0% |
| !! | GGCTGTGTTTTTGTAACAGG+GGG | + | chr4.3:28258855-28258874 | MS.gene96778:intron | 45.0% |
| !! | TAATTTCTGGCCTCCGATAC+AGG | + | chr4.3:28257310-28257329 | MS.gene96778:CDS | 45.0% |
| !! | TCTGATTTGGTCTACCTGCT+AGG | + | chr4.3:28256617-28256636 | MS.gene96778:intron | 45.0% |
| !!! | GACGATGATTTTGGGGCTAA+AGG | - | chr4.3:28255602-28255621 | None:intergenic | 45.0% |
| AAACACCCCGTAAGCTTCAG+TGG | + | chr4.3:28258219-28258238 | MS.gene96778:CDS | 50.0% | |
| ACCATGTTGACAGATGGGAC+TGG | + | chr4.3:28256411-28256430 | MS.gene96778:CDS | 50.0% | |
| ACTTCTTGGAGGTGATGAGG+AGG | + | chr4.3:28258984-28259003 | MS.gene96778:CDS | 50.0% | |
| AGCAGCTGCAAGGTCTTTAG+AGG | - | chr4.3:28258568-28258587 | None:intergenic | 50.0% | |
| AGCTGCTATTGGGATACCTG+TGG | + | chr4.3:28258581-28258600 | MS.gene96778:CDS | 50.0% | |
| ATGTTGACAGATGGGACTGG+GGG | + | chr4.3:28256414-28256433 | MS.gene96778:CDS | 50.0% | |
| ATTCCAGCCGCAACTTCCAT+CGG | - | chr4.3:28255664-28255683 | None:intergenic | 50.0% | |
| ATTGTGTGGCGTTGCAGAAG+AGG | - | chr4.3:28253684-28253703 | None:intergenic | 50.0% | |
| CACCGGACAACATTCAAAGC+TGG | + | chr4.3:28256194-28256213 | MS.gene96778:CDS | 50.0% | |
| CAGCAGGATCTATCGTCCTT+AGG | - | chr4.3:28256314-28256333 | None:intergenic | 50.0% | |
| CATCTACAGACCTGTATCGG+AGG | - | chr4.3:28257323-28257342 | None:intergenic | 50.0% | |
| CATGTTGACAGATGGGACTG+GGG | + | chr4.3:28256413-28256432 | MS.gene96778:CDS | 50.0% | |
| CCATCGGACAAGACTTTCAG+AGG | - | chr4.3:28255648-28255667 | None:intergenic | 50.0% | |
| CCATGTTGACAGATGGGACT+GGG | + | chr4.3:28256412-28256431 | MS.gene96778:CDS | 50.0% | |
| CGACGATGTAACTTCACTCG+CGG | + | chr4.3:28258834-28258853 | MS.gene96778:intron | 50.0% | |
| CGGACAACATTCAAAGCTGG+TGG | + | chr4.3:28256197-28256216 | MS.gene96778:CDS | 50.0% | |
| CGTTATCGCCTTCTTACTGC+AGG | + | chr4.3:28256240-28256259 | MS.gene96778:CDS | 50.0% | |
| CTAAGGACGATAGATCCTGC+TGG | + | chr4.3:28256312-28256331 | MS.gene96778:CDS | 50.0% | |
| CTTCAACCTCCACACCTAAG+AGG | - | chr4.3:28257244-28257263 | None:intergenic | 50.0% | |
| GAGACAAGTAGGAATGGAGG+CGG | + | chr4.3:28258943-28258962 | MS.gene96778:CDS | 50.0% | |
| GCGTGACGAGTGCAACATAA+AGG | - | chr4.3:28255241-28255260 | None:intergenic | 50.0% | |
| GCTGAGACAAGTAGGAATGG+AGG | + | chr4.3:28258940-28258959 | MS.gene96778:CDS | 50.0% | |
| GGAACTTCTTGGAGGTGATG+AGG | + | chr4.3:28258981-28259000 | MS.gene96778:CDS | 50.0% | |
| GGATCTGCTTCTACAGGATC+AGG | - | chr4.3:28256692-28256711 | None:intergenic | 50.0% | |
| GGCAATGCTCAGGAACTTCT+TGG | + | chr4.3:28258970-28258989 | MS.gene96778:CDS | 50.0% | |
| GGGAAGCAGAAACCAAAGGA+AGG | + | chr4.3:28256718-28256737 | MS.gene96778:CDS | 50.0% | |
| GGTCTTCGCTGAGTGTATCT+AGG | - | chr4.3:28253633-28253652 | None:intergenic | 50.0% | |
| GTAATTCGCAGCTTTCCTCC+TGG | + | chr4.3:28255771-28255790 | MS.gene96778:intron | 50.0% | |
| GTATCCCAATAGCAGCTGCA+AGG | - | chr4.3:28258578-28258597 | None:intergenic | 50.0% | |
| GTCTCACATGTGTCAGTGTC+CGG | - | chr4.3:28254222-28254241 | None:intergenic | 50.0% | |
| GTCTTGTCCGATGGAAGTTG+CGG | + | chr4.3:28255654-28255673 | MS.gene96778:CDS | 50.0% | |
| TACAAACCAGGGAAAACGCG+AGG | - | chr4.3:28254533-28254552 | None:intergenic | 50.0% | |
| TCAAGTGCGTCTGGAAATCC+TGG | + | chr4.3:28256441-28256460 | MS.gene96778:CDS | 50.0% | |
| TCGGACAAGACTTTCAGAGG+GGG | - | chr4.3:28255645-28255664 | None:intergenic | 50.0% | |
| TGAGGAGGAAGACAGATCTG+TGG | + | chr4.3:28258999-28259018 | MS.gene96778:CDS | 50.0% | |
| TTGATGCGCCTGCAGTAAGA+AGG | - | chr4.3:28256251-28256270 | None:intergenic | 50.0% | |
| TTGGTTCACCAACTGCCTCA+AGG | - | chr4.3:28256344-28256363 | None:intergenic | 50.0% | |
| TTGTGTGGCGTTGCAGAAGA+GGG | - | chr4.3:28253683-28253702 | None:intergenic | 50.0% | |
| ! | AGAAGCTTGTCAACGGGTTC+CGG | - | chr4.3:28258167-28258186 | None:intergenic | 50.0% |
| ! | CAAGAAGGGCATGGAGAAAC+TGG | - | chr4.3:28255526-28255545 | None:intergenic | 50.0% |
| ! | CCTCTGAAAGTCTTGTCCGA+TGG | + | chr4.3:28255645-28255664 | MS.gene96778:CDS | 50.0% |
| ! | CCTCTTACAGAAGGCATGTC+GGG | - | chr4.3:28254135-28254154 | None:intergenic | 50.0% |
| ! | GGATCAGGTTGCCATCTGTT+TGG | - | chr4.3:28256677-28256696 | None:intergenic | 50.0% |
| ! | GGTGTTTTCCTTGAGGCAGT+TGG | + | chr4.3:28256333-28256352 | MS.gene96778:CDS | 50.0% |
| ! | TATGTGTCGACGTGTCCTTG+TGG | - | chr4.3:28254043-28254062 | None:intergenic | 50.0% |
| ! | TCCTGCTGGTGTTTTCCTTG+AGG | + | chr4.3:28256326-28256345 | MS.gene96778:CDS | 50.0% |
| ! | TGTCTGAGGTGGCTGACTTA+TGG | - | chr4.3:28257121-28257140 | None:intergenic | 50.0% |
| !! | ATGGGTCATCGAGGTTTTGG+CGG | + | chr4.3:28253907-28253926 | MS.gene96778:CDS | 50.0% |
| !! | CGCGGCTGTGTTTTTGTAAC+AGG | + | chr4.3:28258852-28258871 | MS.gene96778:intron | 50.0% |
| !! | GGTGCTGGCGATCTTTCATA+CGG | + | chr4.3:28253715-28253734 | MS.gene96778:CDS | 50.0% |
| !! | TCAGAGGGGGTATCAATTCC+AGG | - | chr4.3:28255632-28255651 | None:intergenic | 50.0% |
| ACCGCCGAGAAGAGATTGTG+TGG | - | chr4.3:28253698-28253717 | None:intergenic | 55.0% | |
| AGGGAAAACGCGAGGAAGTG+TGG | - | chr4.3:28254525-28254544 | None:intergenic | 55.0% | |
| AGGGCATGGAGAAACTGGAG+AGG | - | chr4.3:28255521-28255540 | None:intergenic | 55.0% | |
| CCCAGTCCCATCTGTCAACA+TGG | - | chr4.3:28256415-28256434 | None:intergenic | 55.0% | |
| CCCGACATGCCTTCTGTAAG+AGG | + | chr4.3:28254132-28254151 | MS.gene96778:intron | 55.0% | |
| CTCCACACCTAAGAGGGCAA+AGG | - | chr4.3:28257237-28257256 | None:intergenic | 55.0% | |
| CTTTGCCCTCTTAGGTGTGG+AGG | + | chr4.3:28257235-28257254 | MS.gene96778:intron | 55.0% | |
| GCCACACAATCTCTTCTCGG+CGG | + | chr4.3:28253694-28253713 | MS.gene96778:CDS | 55.0% | |
| GCCTCAAGGAAAACACCAGC+AGG | - | chr4.3:28256330-28256349 | None:intergenic | 55.0% | |
| GGAAGACAGATCTGTGGCCT+CGG | + | chr4.3:28259005-28259024 | MS.gene96778:CDS | 55.0% | |
| GGGGGAAATTCAAGTGCGTC+TGG | + | chr4.3:28256432-28256451 | MS.gene96778:CDS | 55.0% | |
| TGCCTTTGCCCTCTTAGGTG+TGG | + | chr4.3:28257232-28257251 | MS.gene96778:intron | 55.0% | |
| ! | AACGGGTTCCGGCAGGTTAA+GGG | - | chr4.3:28258156-28258175 | None:intergenic | 55.0% |
| ! | ACACTTCCTCGCGTTTTCCC+TGG | + | chr4.3:28254524-28254543 | MS.gene96778:CDS | 55.0% |
| ! | AGGAGTCGTTGGGTACTGCT+AGG | - | chr4.3:28257546-28257565 | None:intergenic | 55.0% |
| ! | GCACCGACACCTCTTACAGA+AGG | - | chr4.3:28254144-28254163 | None:intergenic | 55.0% |
| !! | CTGTAAGAGGTGTCGGTGCT+AGG | + | chr4.3:28254145-28254164 | MS.gene96778:intron | 55.0% |
| ACGGGTTCCGGCAGGTTAAG+GGG | - | chr4.3:28258155-28258174 | None:intergenic | 60.0% | |
| AGTAGGAATGGAGGCGGCAG+TGG | + | chr4.3:28258949-28258968 | MS.gene96778:CDS | 60.0% | |
| CAATCTCTTCTCGGCGGTGC+TGG | + | chr4.3:28253700-28253719 | MS.gene96778:CDS | 60.0% | |
| GGATGAGCCCCTTAACCTGC+CGG | + | chr4.3:28258145-28258164 | MS.gene96778:intron | 60.0% | |
| GGGGGTCATTGCAGAGTCGT+CGG | + | chr4.3:28258873-28258892 | MS.gene96778:intron | 60.0% | |
| GGGGTCATTGCAGAGTCGTC+GGG | + | chr4.3:28258874-28258893 | MS.gene96778:CDS | 60.0% | |
| GGGTCATTGCAGAGTCGTCG+GGG | + | chr4.3:28258875-28258894 | MS.gene96778:CDS | 60.0% | |
| GGTCATTGCAGAGTCGTCGG+GGG | + | chr4.3:28258876-28258895 | MS.gene96778:CDS | 60.0% | |
| GTCATTGCAGAGTCGTCGGG+GGG | + | chr4.3:28258877-28258896 | MS.gene96778:CDS | 60.0% | |
| TGTCCGATGGAAGTTGCGGC+TGG | + | chr4.3:28255658-28255677 | MS.gene96778:CDS | 60.0% | |
| ! | CAACGGGTTCCGGCAGGTTA+AGG | - | chr4.3:28258157-28258176 | None:intergenic | 60.0% |
| !! | GTCGGTGCTAGGAAGCCTTG+TGG | + | chr4.3:28254156-28254175 | MS.gene96778:intron | 60.0% |
| AGGCGGCAGTGGCAATGCTC+AGG | + | chr4.3:28258960-28258979 | MS.gene96778:CDS | 65.0% | |
| ! | GCTTGTCAACGGGTTCCGGC+AGG | - | chr4.3:28258163-28258182 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 28253592 | 28259819 | 28253592 | ID=MS.gene96778 |
| chr4.3 | mRNA | 28253592 | 28259819 | 28253592 | ID=MS.gene96778.t1;Parent=MS.gene96778 |
| chr4.3 | exon | 28253592 | 28253822 | 28253592 | ID=MS.gene96778.t1.exon1;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28253592 | 28253822 | 28253592 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28253891 | 28253983 | 28253891 | ID=MS.gene96778.t1.exon2;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28253891 | 28253983 | 28253891 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28254314 | 28254545 | 28254314 | ID=MS.gene96778.t1.exon3;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28254314 | 28254545 | 28254314 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28254877 | 28255166 | 28254877 | ID=MS.gene96778.t1.exon4;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28254877 | 28255166 | 28254877 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28255318 | 28255389 | 28255318 | ID=MS.gene96778.t1.exon5;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28255318 | 28255389 | 28255318 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28255512 | 28255756 | 28255512 | ID=MS.gene96778.t1.exon6;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28255512 | 28255756 | 28255512 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28256155 | 28256571 | 28256155 | ID=MS.gene96778.t1.exon7;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28256155 | 28256571 | 28256155 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28256682 | 28256883 | 28256682 | ID=MS.gene96778.t1.exon8;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28256682 | 28256883 | 28256682 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28257027 | 28257141 | 28257027 | ID=MS.gene96778.t1.exon9;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28257027 | 28257141 | 28257027 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28257249 | 28257331 | 28257249 | ID=MS.gene96778.t1.exon10;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28257249 | 28257331 | 28257249 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28258146 | 28258265 | 28258146 | ID=MS.gene96778.t1.exon11;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28258146 | 28258265 | 28258146 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28258398 | 28258486 | 28258398 | ID=MS.gene96778.t1.exon12;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28258398 | 28258486 | 28258398 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28258560 | 28258641 | 28258560 | ID=MS.gene96778.t1.exon13;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28258560 | 28258641 | 28258560 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28258874 | 28259065 | 28258874 | ID=MS.gene96778.t1.exon14;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28258874 | 28259065 | 28258874 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28259515 | 28259583 | 28259515 | ID=MS.gene96778.t1.exon15;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28259515 | 28259583 | 28259515 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| chr4.3 | exon | 28259697 | 28259819 | 28259697 | ID=MS.gene96778.t1.exon16;Parent=MS.gene96778.t1 |
| chr4.3 | CDS | 28259697 | 28259819 | 28259697 | ID=cds.MS.gene96778.t1;Parent=MS.gene96778.t1 |
| Gene Sequence |
| Protein sequence |
