Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26890.t1 | XP_013469843.1 | 98.8 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 9.10E-268 | 932.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26890.t1 | Q9STS3 | 75.1 | 579 | 141 | 3 | 1 | 577 | 1 | 578 | 8.2e-201 | 701.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26890.t1 | A0A072VQG1 | 98.8 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 6.5e-268 | 932.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022091 | MS.gene26890 | PPI |
| MS.gene32240 | MS.gene26890 | PPI |
| MS.gene44181 | MS.gene26890 | PPI |
| MS.gene56523 | MS.gene26890 | PPI |
| MS.gene38996 | MS.gene26890 | PPI |
| MS.gene95446 | MS.gene26890 | PPI |
| MS.gene40797 | MS.gene26890 | PPI |
| MS.gene005307 | MS.gene26890 | PPI |
| MS.gene038286 | MS.gene26890 | PPI |
| MS.gene48038 | MS.gene26890 | PPI |
| MS.gene006802 | MS.gene26890 | PPI |
| MS.gene007855 | MS.gene26890 | PPI |
| MS.gene43188 | MS.gene26890 | PPI |
| MS.gene032323 | MS.gene26890 | PPI |
| MS.gene96778 | MS.gene26890 | PPI |
| MS.gene26890 | MS.gene057101 | PPI |
| MS.gene93598 | MS.gene26890 | PPI |
| MS.gene031482 | MS.gene26890 | PPI |
| MS.gene43131 | MS.gene26890 | PPI |
| MS.gene56142 | MS.gene26890 | PPI |
| MS.gene97314 | MS.gene26890 | PPI |
| MS.gene017070 | MS.gene26890 | PPI |
| MS.gene26890 | MS.gene93612 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26890.t1 | MTR_1g103750 | 98.789 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1191 |
| MS.gene26890.t1 | MTR_8g021140 | 86.701 | 579 | 72 | 4 | 1 | 577 | 1 | 576 | 0.0 | 1047 |
| MS.gene26890.t1 | MTR_8g447330 | 46.353 | 425 | 122 | 14 | 1 | 366 | 1 | 378 | 7.21e-98 | 303 |
| MS.gene26890.t1 | MTR_8g447330 | 74.737 | 95 | 24 | 0 | 410 | 504 | 284 | 378 | 6.59e-43 | 158 |
| MS.gene26890.t1 | MTR_6g016680 | 28.070 | 342 | 230 | 4 | 213 | 554 | 411 | 736 | 3.18e-29 | 123 |
| MS.gene26890.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 358 | 649 | 9.09e-28 | 118 |
| MS.gene26890.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 372 | 663 | 9.70e-28 | 118 |
| MS.gene26890.t1 | MTR_2g019850 | 25.095 | 263 | 194 | 3 | 233 | 495 | 211 | 470 | 1.09e-13 | 74.3 |
| MS.gene26890.t1 | MTR_1g079510 | 24.444 | 315 | 187 | 6 | 281 | 557 | 107 | 408 | 8.21e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26890.t1 | AT3G48150 | 74.093 | 579 | 147 | 3 | 1 | 577 | 1 | 578 | 0.0 | 916 |
| MS.gene26890.t1 | AT3G48150 | 74.624 | 465 | 117 | 1 | 114 | 577 | 1 | 465 | 0.0 | 748 |
| MS.gene26890.t1 | AT2G20000 | 27.907 | 301 | 208 | 2 | 254 | 554 | 434 | 725 | 5.99e-28 | 119 |
| MS.gene26890.t1 | AT3G16320 | 27.500 | 320 | 215 | 4 | 241 | 555 | 390 | 697 | 6.80e-25 | 110 |
| MS.gene26890.t1 | AT3G16320 | 27.500 | 320 | 215 | 4 | 241 | 555 | 401 | 708 | 7.58e-25 | 109 |
| MS.gene26890.t1 | AT2G20000 | 33.155 | 187 | 125 | 0 | 254 | 440 | 434 | 620 | 1.26e-24 | 108 |
| MS.gene26890.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 401 | 544 | 1.06e-15 | 80.9 |
| MS.gene26890.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 390 | 533 | 1.10e-15 | 80.5 |
Find 113 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 1.4:-80253832 | MS.gene26890:CDS |
| TCTCTCTGCTTGGACACTTA+TGG | 0.199975 | 1.4:-80253731 | MS.gene26890:CDS |
| TGGGAATTATTACAGTTTAA+AGG | 0.204204 | 1.4:-80253812 | MS.gene26890:CDS |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 1.4:-80253831 | MS.gene26890:CDS |
| CTCTCTGCTTGGACACTTAT+GGG | 0.273049 | 1.4:-80253730 | MS.gene26890:CDS |
| TATCAGTCATGAATACTCTA+TGG | 0.285092 | 1.4:+80253863 | None:intergenic |
| GGGAATTATTACAGTTTAAA+GGG | 0.286813 | 1.4:-80253811 | MS.gene26890:CDS |
| GAATATTTACTCGGAACTTT+TGG | 0.289586 | 1.4:-80254066 | MS.gene26890:CDS |
| ACAGAAAGGCAATGATAATT+TGG | 0.300674 | 1.4:-80254280 | MS.gene26890:CDS |
| GTATGTCGCTACGCCGGTTA+TGG | 0.319352 | 1.4:-80256686 | MS.gene26890:CDS |
| AAGATCTTATGCTCTCTATC+TGG | 0.346201 | 1.4:-80256542 | MS.gene26890:intron |
| CAAATTCTTTCAAACTGTAC+TGG | 0.353720 | 1.4:+80254007 | None:intergenic |
| ACAATGACGACGCCGATTGC+AGG | 0.355344 | 1.4:-80256715 | MS.gene26890:CDS |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 1.4:+80253832 | None:intergenic |
| GATGATAGAACTTGAGGGTC+TGG | 0.368699 | 1.4:-80254418 | MS.gene26890:CDS |
| ATCCACAGTCGGGAATCATT+TGG | 0.376499 | 1.4:+80253535 | None:intergenic |
| AAGTAATGAAGCGCGTATAA+AGG | 0.384843 | 1.4:+80253580 | None:intergenic |
| CCTCATCAAGCTTGCGAAGC+TGG | 0.392459 | 1.4:+80253485 | None:intergenic |
| GCAAAGCTGCATTCAGAGTT+GGG | 0.408786 | 1.4:-80253397 | MS.gene26890:CDS |
| TGTGATTATCGTGCTTTGTA+TGG | 0.409421 | 1.4:-80253634 | MS.gene26890:CDS |
| ATGCAGGGCGGCGGAGCAAT+TGG | 0.413245 | 1.4:-80256839 | MS.gene26890:intron |
| TCCACAGTCGGGAATCATTT+GGG | 0.420700 | 1.4:+80253536 | None:intergenic |
| ACCATATAAGTACAAACAAA+AGG | 0.420898 | 1.4:+80254314 | None:intergenic |
| GAGGATGGAATCTGAAGAGA+GGG | 0.426699 | 1.4:-80253332 | MS.gene26890:CDS |
| TAAAAGTGATGCTGTGAATC+AGG | 0.432981 | 1.4:-80254394 | MS.gene26890:CDS |
| CATGTTCTACGGGATCAAAT+TGG | 0.433240 | 1.4:-80256583 | MS.gene26890:CDS |
| AATATCAACTGAAGTGCATA+AGG | 0.439777 | 1.4:+80254188 | None:intergenic |
| GTCTCTATTCCGCTTCCAAA+TGG | 0.440463 | 1.4:-80256960 | MS.gene26890:intron |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | 1.4:-80254233 | MS.gene26890:CDS |
| TGCAAAGCTGCATTCAGAGT+TGG | 0.452965 | 1.4:-80253398 | MS.gene26890:CDS |
| TGATGCTGTGAATCAGGAAT+TGG | 0.453070 | 1.4:-80254388 | MS.gene26890:CDS |
| GTCTTAATGTCAGTAGTCAT+TGG | 0.455741 | 1.4:-80254158 | MS.gene26890:CDS |
| ACCCTTGGAACTGGAATGCC+TGG | 0.456175 | 1.4:-80254224 | MS.gene26890:CDS |
| GAGCAGCTCTCTTGTATTCA+CGG | 0.466881 | 1.4:+80256605 | None:intergenic |
| AGGAATTGGTTTCTTTAGAG+AGG | 0.470455 | 1.4:-80254374 | MS.gene26890:CDS |
| AGGGCATCAAACTGTGATGA+TGG | 0.471291 | 1.4:-80253445 | MS.gene26890:CDS |
| ACTTCGTCCTCCTCCATAAC+CGG | 0.471498 | 1.4:+80256673 | None:intergenic |
| GGGCTTTAGCAATTTGAGCT+TGG | 0.481121 | 1.4:+80254028 | None:intergenic |
| AGCAAAGCCTCAATCATGTT+AGG | 0.482273 | 1.4:+80253304 | None:intergenic |
| AGAGAGCTGCTCATGTTCTA+CGG | 0.487611 | 1.4:-80256594 | MS.gene26890:CDS |
| GAGGAGGACGAAGTTGTTGA+TGG | 0.493850 | 1.4:-80256664 | MS.gene26890:CDS |
| CAGAAAGGATTTAGAGAGGA+TGG | 0.495031 | 1.4:-80253347 | MS.gene26890:CDS |
| CTGCTGTGAATGCCTATCGT+CGG | 0.496961 | 1.4:-80253675 | MS.gene26890:CDS |
| ACACGTCTTCTCGATTATAC+TGG | 0.497476 | 1.4:-80253223 | MS.gene26890:CDS |
| AGAGGATGGAATCTGAAGAG+AGG | 0.500780 | 1.4:-80253333 | MS.gene26890:CDS |
| TCCATGTCTTCCACTCTGTA+AGG | 0.501402 | 1.4:+80253943 | None:intergenic |
| TGCTGTGAATGCCTATCGTC+GGG | 0.506475 | 1.4:-80253674 | MS.gene26890:CDS |
| CTCCAATGTGCTTTATGCTA+AGG | 0.506539 | 1.4:-80253914 | MS.gene26890:CDS |
| AAATTCTTTCAAACTGTACT+GGG | 0.511198 | 1.4:+80254008 | None:intergenic |
| GAAGAGATGATAGAACTTGA+GGG | 0.512391 | 1.4:-80254423 | MS.gene26890:CDS |
| GGAAGAGATGATAGAACTTG+AGG | 0.513786 | 1.4:-80254424 | MS.gene26890:CDS |
| TGTCAGTAGTCATTGGATGA+AGG | 0.516391 | 1.4:-80254151 | MS.gene26890:CDS |
| TTGTCTACACTCCGCAAGAA+TGG | 0.517526 | 1.4:-80254348 | MS.gene26890:CDS |
| CGCTACGCCGGTTATGGAGG+AGG | 0.520117 | 1.4:-80256680 | MS.gene26890:CDS |
| ATGATAGAACTTGAGGGTCT+GGG | 0.520445 | 1.4:-80254417 | MS.gene26890:CDS |
| TGGACTAGGACAAGCTTATG+AGG | 0.520816 | 1.4:-80253614 | MS.gene26890:CDS |
| GGGCATCAAACTGTGATGAT+GGG | 0.526275 | 1.4:-80253444 | MS.gene26890:CDS |
| TAAGGATTGCAGCTCAGTCC+AGG | 0.528177 | 1.4:+80254206 | None:intergenic |
| TTCGAAGGCGTGAATTTCGA+TGG | 0.532573 | 1.4:+80256796 | None:intergenic |
| GAGAGCTGCTCATGTTCTAC+GGG | 0.534380 | 1.4:-80256593 | MS.gene26890:CDS |
| AGCCATTGCTATCCACAGTC+GGG | 0.535467 | 1.4:+80253525 | None:intergenic |
| TTTGGCGCGTACAGTTCTTG+TGG | 0.535552 | 1.4:-80254262 | MS.gene26890:CDS |
| CGATAGGCATTCACAGCAGC+GGG | 0.537165 | 1.4:+80253679 | None:intergenic |
| CCATATAAGTACAAACAAAA+GGG | 0.545143 | 1.4:+80254315 | None:intergenic |
| GTCCAGGCATTCCAGTTCCA+AGG | 0.545231 | 1.4:+80254222 | None:intergenic |
| GGAAAGTGCTCAACATCCGC+TGG | 0.547287 | 1.4:+80253022 | None:intergenic |
| GGAATTGGTTTCTTTAGAGA+GGG | 0.550127 | 1.4:-80254373 | MS.gene26890:CDS |
| TATCGTGCTTTGTATGGACT+AGG | 0.552484 | 1.4:-80253628 | MS.gene26890:CDS |
| TGAAATATACCATTTGGAAG+CGG | 0.554816 | 1.4:+80256951 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | 1.4:-80254239 | MS.gene26890:CDS |
| ACATACGAAACACCTGCAAT+CGG | 0.559093 | 1.4:+80256703 | None:intergenic |
| GGCAGGAGAAAAGCGAAAAG+AGG | 0.563435 | 1.4:-80254445 | MS.gene26890:CDS |
| GCAGAAGCAGATGAGTTCAA+AGG | 0.564871 | 1.4:-80257034 | None:intergenic |
| ATCAGTCATGAATACTCTAT+GGG | 0.566494 | 1.4:+80253864 | None:intergenic |
| ACTCTGAATGCAGCTTTGCA+AGG | 0.569872 | 1.4:+80253401 | None:intergenic |
| AAGAAGAACTGAAGAAGCAG+AGG | 0.572030 | 1.4:-80253254 | MS.gene26890:CDS |
| GATCAATTGTGCCATTCTTG+CGG | 0.578754 | 1.4:+80254337 | None:intergenic |
| GGAATTATTACAGTTTAAAG+GGG | 0.578878 | 1.4:-80253810 | MS.gene26890:CDS |
| GGTCTTATACTGAAACAGAA+AGG | 0.579233 | 1.4:-80254294 | MS.gene26890:CDS |
| TATTTCAACAGCCCGACGAT+AGG | 0.582252 | 1.4:+80253663 | None:intergenic |
| AGAGTTGGGACGCACTGAAG+AGG | 0.583415 | 1.4:-80253383 | MS.gene26890:CDS |
| GAGCCATTGCTATCCACAGT+CGG | 0.589081 | 1.4:+80253524 | None:intergenic |
| TCAAAATATGAATATTTACT+CGG | 0.590894 | 1.4:-80254075 | MS.gene26890:CDS |
| TCCTTACAGAGTGGAAGACA+TGG | 0.592201 | 1.4:-80253944 | MS.gene26890:CDS |
| TTCCTTAGCATAAAGCACAT+TGG | 0.592234 | 1.4:+80253912 | None:intergenic |
| AGGCAATAAAGTGTTACAGA+AGG | 0.600848 | 1.4:-80253465 | MS.gene26890:CDS |
| AGGGCGGCGGAGCAATTGGT+AGG | 0.602481 | 1.4:-80256835 | MS.gene26890:CDS |
| TTGATGAAAATGCAGGGCGG+CGG | 0.604789 | 1.4:-80256848 | MS.gene26890:intron |
| CCAGCTTCGCAAGCTTGATG+AGG | 0.605822 | 1.4:-80253485 | MS.gene26890:CDS |
| GGCAATAAAGTGTTACAGAA+GGG | 0.606652 | 1.4:-80253464 | MS.gene26890:CDS |
| GGAAGGACCTAACATGATTG+AGG | 0.608692 | 1.4:-80253311 | MS.gene26890:CDS |
| TCCAGGCATTCCAGTTCCAA+GGG | 0.610042 | 1.4:+80254223 | None:intergenic |
| GGCATCAAACTGTGATGATG+GGG | 0.611034 | 1.4:-80253443 | MS.gene26890:CDS |
| AAGTGCTCAACATCCGCTGG+AGG | 0.612692 | 1.4:+80253025 | None:intergenic |
| TGTCGCTACGCCGGTTATGG+AGG | 0.615333 | 1.4:-80256683 | MS.gene26890:CDS |
| ACTACAGAAAGGATTTAGAG+AGG | 0.616904 | 1.4:-80253351 | MS.gene26890:CDS |
| TTCCCGACTGTGGATAGCAA+TGG | 0.623157 | 1.4:-80253527 | MS.gene26890:CDS |
| TCATGAATACTCTATGGGCA+AGG | 0.627413 | 1.4:+80253869 | None:intergenic |
| AGTGCTCAACATCCGCTGGA+GGG | 0.630408 | 1.4:+80253026 | None:intergenic |
| CGTTGAAACCTCGTATTCGA+AGG | 0.633904 | 1.4:+80256781 | None:intergenic |
| ACAATCTAGTTTCCCTCCAG+CGG | 0.634292 | 1.4:-80253038 | MS.gene26890:CDS |
| TACAAAGCACGATAATCACA+CGG | 0.635868 | 1.4:+80253637 | None:intergenic |
| CTATATTTGAAGAACTGCTG+AGG | 0.641049 | 1.4:-80253972 | MS.gene26890:CDS |
| AATTCACGCCTTCGAATACG+AGG | 0.641925 | 1.4:-80256789 | MS.gene26890:CDS |
| GTGGAAGTTCAAGTATTCGT+CGG | 0.649300 | 1.4:-80256759 | MS.gene26890:CDS |
| ATGGAATCTGAAGAGAGGGA+AGG | 0.651788 | 1.4:-80253328 | MS.gene26890:CDS |
| TGTTTCGTATGTCGCTACGC+CGG | 0.657212 | 1.4:-80256692 | MS.gene26890:CDS |
| TTCATCAAAAGACATTATGG+AGG | 0.673231 | 1.4:+80253001 | None:intergenic |
| ACGATAGGCATTCACAGCAG+CGG | 0.679646 | 1.4:+80253678 | None:intergenic |
| GAGGATTGATCCTTACAGAG+TGG | 0.688847 | 1.4:-80253953 | MS.gene26890:CDS |
| ACCCAAATGATTCCCGACTG+TGG | 0.691891 | 1.4:-80253537 | MS.gene26890:CDS |
| ACAAAGCACGATAATCACAC+GGG | 0.717331 | 1.4:+80253638 | None:intergenic |
| TCGAATACGAGGTTTCAACG+TGG | 0.774191 | 1.4:-80256778 | MS.gene26890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTGATTATTAAATGATT+TGG | + | chr1.4:80256926-80256945 | None:intergenic | 15.0% |
| !! | TACTAATAAACTATAATTAC+TGG | - | chr1.4:80254163-80254182 | MS.gene26890:CDS | 15.0% |
| !! | TCAAAATATGAATATTTACT+CGG | - | chr1.4:80255964-80255983 | MS.gene26890:intron | 15.0% |
| !! | TTTCAAAAATAACTAAAAAG+CGG | + | chr1.4:80255085-80255104 | None:intergenic | 15.0% |
| !!! | CTATTAACATTTTGTTTAAA+AGG | - | chr1.4:80254812-80254831 | MS.gene26890:intron | 15.0% |
| !!! | CTTTTAAACAAAATGTTAAT+AGG | + | chr1.4:80254814-80254833 | None:intergenic | 15.0% |
| !!! | TATAAGAAATACCAATTTTA+AGG | + | chr1.4:80254784-80254803 | None:intergenic | 15.0% |
| !! | AAACGTTACTTGATATATTT+AGG | - | chr1.4:80254123-80254142 | MS.gene26890:CDS | 20.0% |
| !! | AAGGAATAGATATTTAGATT+AGG | + | chr1.4:80253127-80253146 | None:intergenic | 20.0% |
| !! | AGGAATAGATATTTAGATTA+GGG | + | chr1.4:80253126-80253145 | None:intergenic | 20.0% |
| !! | CTAAATGAAGATAATACATT+GGG | - | chr1.4:80255412-80255431 | MS.gene26890:intron | 20.0% |
| !! | TCAAATCAAATAAAAGAGAA+TGG | + | chr1.4:80254464-80254483 | None:intergenic | 20.0% |
| !! | TCTAAATGAAGATAATACAT+TGG | - | chr1.4:80255411-80255430 | MS.gene26890:intron | 20.0% |
| !!! | AGAAAAAAATCTTTTCGAAA+AGG | + | chr1.4:80255290-80255309 | None:intergenic | 20.0% |
| !!! | ATAATTTTTGTCCAGTTTAA+GGG | + | chr1.4:80256289-80256308 | None:intergenic | 20.0% |
| !!! | GAAAAAAATCTTTTCGAAAA+GGG | + | chr1.4:80255289-80255308 | None:intergenic | 20.0% |
| !!! | GAAATTATTTTTACCAACAT+TGG | - | chr1.4:80253560-80253579 | MS.gene26890:CDS | 20.0% |
| !!! | GTTAAATATTTTTTACTCAC+AGG | + | chr1.4:80256843-80256862 | None:intergenic | 20.0% |
| !!! | TACTTTCCAAGTTTTATTTA+CGG | + | chr1.4:80254951-80254970 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTGATTTGAGTT+GGG | - | chr1.4:80254467-80254486 | MS.gene26890:intron | 20.0% |
| !!! | TTTGCATTTTCTGTTTATAT+GGG | - | chr1.4:80253786-80253805 | MS.gene26890:CDS | 20.0% |
| !!! | TTTTATAATGTCAAATGCAT+TGG | - | chr1.4:80253716-80253735 | MS.gene26890:CDS | 20.0% |
| ! | AAAGCATATGTTGTCAATAA+TGG | + | chr1.4:80254328-80254347 | None:intergenic | 25.0% |
| ! | AAATTCTTTCAAACTGTACT+GGG | + | chr1.4:80256034-80256053 | None:intergenic | 25.0% |
| ! | AATTCCTATAATTGTTGAAG+TGG | - | chr1.4:80254377-80254396 | MS.gene26890:CDS | 25.0% |
| ! | ACCATATAAGTACAAACAAA+AGG | + | chr1.4:80255728-80255747 | None:intergenic | 25.0% |
| ! | ACTGCAAAAAATTTACTAAG+AGG | - | chr1.4:80256966-80256985 | MS.gene26890:CDS | 25.0% |
| ! | ACTTTGATGTAGTAGTATTA+TGG | - | chr1.4:80253759-80253778 | MS.gene26890:CDS | 25.0% |
| ! | AGAAAAAGTGAGAAGTTAAA+TGG | + | chr1.4:80255382-80255401 | None:intergenic | 25.0% |
| ! | ATAATCAAAGTCATTCTTTC+AGG | - | chr1.4:80256935-80256954 | MS.gene26890:intron | 25.0% |
| ! | ATTCCTATAATTGTTGAAGT+GGG | - | chr1.4:80254378-80254397 | MS.gene26890:CDS | 25.0% |
| ! | CACTAATCAGATTTAAAAGA+TGG | + | chr1.4:80254658-80254677 | None:intergenic | 25.0% |
| ! | CCATATAAGTACAAACAAAA+GGG | + | chr1.4:80255727-80255746 | None:intergenic | 25.0% |
| ! | GGAATTATTACAGTTTAAAG+GGG | - | chr1.4:80256229-80256248 | MS.gene26890:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+GGG | - | chr1.4:80256228-80256247 | MS.gene26890:intron | 25.0% |
| ! | GTAAATAAAACTTGGAAAGT+AGG | - | chr1.4:80254950-80254969 | MS.gene26890:intron | 25.0% |
| ! | TACGTTATAAACGAAATTGT+TGG | - | chr1.4:80253682-80253701 | MS.gene26890:CDS | 25.0% |
| ! | TGGGAATTATTACAGTTTAA+AGG | - | chr1.4:80256227-80256246 | MS.gene26890:intron | 25.0% |
| ! | TTAACTCCTTAAATAGATCT+CGG | - | chr1.4:80253657-80253676 | MS.gene26890:CDS | 25.0% |
| !! | ATTTTGTTGAGTTCCATTTT+GGG | - | chr1.4:80254017-80254036 | MS.gene26890:CDS | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | - | chr1.4:80256208-80256227 | MS.gene26890:intron | 25.0% |
| !! | GAAGTTTGAAATATACCATT+TGG | + | chr1.4:80253097-80253116 | None:intergenic | 25.0% |
| !! | GATAATTTTTGTCCAGTTTA+AGG | + | chr1.4:80256290-80256309 | None:intergenic | 25.0% |
| !! | GTGTTTACTTCAATTTTTGT+GGG | - | chr1.4:80253928-80253947 | MS.gene26890:CDS | 25.0% |
| !! | GTTTGCATTTTCTGTTTATA+TGG | - | chr1.4:80253785-80253804 | MS.gene26890:CDS | 25.0% |
| !! | TATATTCAAGTTAAAGCATG+AGG | - | chr1.4:80255059-80255078 | MS.gene26890:intron | 25.0% |
| !! | TGTGTTTACTTCAATTTTTG+TGG | - | chr1.4:80253927-80253946 | MS.gene26890:CDS | 25.0% |
| !!! | ATTTGAATTTGATTTCTAGC+TGG | - | chr1.4:80253604-80253623 | MS.gene26890:CDS | 25.0% |
| !!! | CTCTTTTATTTGATTTGAGT+TGG | - | chr1.4:80254466-80254485 | MS.gene26890:intron | 25.0% |
| !!! | TATGACCTTCTTTAATTTGA+AGG | + | chr1.4:80254634-80254653 | None:intergenic | 25.0% |
| !!! | TGAAAGAACTGAGTTTTTTT+GGG | - | chr1.4:80255518-80255537 | MS.gene26890:intron | 25.0% |
| !!! | TGATGGTGATTTTTATCTTT+TGG | - | chr1.4:80253392-80253411 | MS.gene26890:CDS | 25.0% |
| !!! | TTGAAAGAACTGAGTTTTTT+TGG | - | chr1.4:80255517-80255536 | MS.gene26890:intron | 25.0% |
| AATATCAACTGAAGTGCATA+AGG | + | chr1.4:80255854-80255873 | None:intergenic | 30.0% | |
| ACAAAAATTATCTCTCTGCT+TGG | - | chr1.4:80256298-80256317 | MS.gene26890:intron | 30.0% | |
| ACAATGTACTAATCCAATGT+TGG | + | chr1.4:80253576-80253595 | None:intergenic | 30.0% | |
| ACAGAAAGGCAATGATAATT+TGG | - | chr1.4:80255759-80255778 | MS.gene26890:intron | 30.0% | |
| ATATTACACACACAACTTCA+TGG | + | chr1.4:80254849-80254868 | None:intergenic | 30.0% | |
| ATCAGTCATGAATACTCTAT+GGG | + | chr1.4:80256178-80256197 | None:intergenic | 30.0% | |
| CAAATTCTTTCAAACTGTAC+TGG | + | chr1.4:80256035-80256054 | None:intergenic | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | + | chr1.4:80256210-80256229 | None:intergenic | 30.0% | |
| TAACTCCTTAAATAGATCTC+GGG | - | chr1.4:80253658-80253677 | MS.gene26890:CDS | 30.0% | |
| TATCAGTCATGAATACTCTA+TGG | + | chr1.4:80256179-80256198 | None:intergenic | 30.0% | |
| TCTTAAAAACATTCTGCTTC+AGG | + | chr1.4:80255022-80255041 | None:intergenic | 30.0% | |
| TGAAATATACCATTTGGAAG+CGG | + | chr1.4:80253091-80253110 | None:intergenic | 30.0% | |
| TGGAAAAACATATGTTGTGA+GGG | - | chr1.4:80253633-80253652 | MS.gene26890:CDS | 30.0% | |
| TGGAGTTCTTATGTTTATTG+TGG | - | chr1.4:80253736-80253755 | MS.gene26890:CDS | 30.0% | |
| TTAAATCTGATTAGTGCTGT+TGG | - | chr1.4:80254662-80254681 | MS.gene26890:intron | 30.0% | |
| TTCCTATAATTGTTGAAGTG+GGG | - | chr1.4:80254379-80254398 | MS.gene26890:CDS | 30.0% | |
| TTGACAAAACTAACCATAAG+AGG | + | chr1.4:80255314-80255333 | None:intergenic | 30.0% | |
| TTGGAAAAACATATGTTGTG+AGG | - | chr1.4:80253632-80253651 | MS.gene26890:CDS | 30.0% | |
| ! | CCTGAATCTTGTTGTATTAT+TGG | - | chr1.4:80256207-80256226 | MS.gene26890:intron | 30.0% |
| ! | CGTTTTCCGTAAATAAAACT+TGG | - | chr1.4:80254942-80254961 | MS.gene26890:intron | 30.0% |
| ! | GAATATTTACTCGGAACTTT+TGG | - | chr1.4:80255973-80255992 | MS.gene26890:intron | 30.0% |
| ! | GATTTTGTTGAGTTCCATTT+TGG | - | chr1.4:80254016-80254035 | MS.gene26890:CDS | 30.0% |
| ! | TTCGTATTGATGAAAATGCA+GGG | - | chr1.4:80253185-80253204 | MS.gene26890:intron | 30.0% |
| ! | TTTCGTATTGATGAAAATGC+AGG | - | chr1.4:80253184-80253203 | MS.gene26890:intron | 30.0% |
| ! | TTTTGTTGAGTTCCATTTTG+GGG | - | chr1.4:80254018-80254037 | MS.gene26890:CDS | 30.0% |
| !! | AACATTGGATTAGTACATTG+TGG | - | chr1.4:80253575-80253594 | MS.gene26890:CDS | 30.0% |
| !! | CATTATGCATCCTTAGTTTT+TGG | + | chr1.4:80255936-80255955 | None:intergenic | 30.0% |
| !! | CCCTTTTGTTTGTACTTATA+TGG | - | chr1.4:80255724-80255743 | MS.gene26890:intron | 30.0% |
| !! | GAAATTACTGAGTTTGCTAT+TGG | + | chr1.4:80255175-80255194 | None:intergenic | 30.0% |
| !!! | AGATTTTTTTCTGCCTCTTA+TGG | - | chr1.4:80255298-80255317 | MS.gene26890:intron | 30.0% |
| !!! | CCAGTGTTTTAACTTTTACT+GGG | + | chr1.4:80254750-80254769 | None:intergenic | 30.0% |
| !!! | GAAAGAACTGAGTTTTTTTG+GGG | - | chr1.4:80255519-80255538 | MS.gene26890:intron | 30.0% |
| AAAGTCATTCTTTCAGGAGA+CGG | - | chr1.4:80256941-80256960 | MS.gene26890:intron | 35.0% | |
| AAATGAAACGTCGTCGTTTA+AGG | + | chr1.4:80253167-80253186 | None:intergenic | 35.0% | |
| AACCCCACTTCAACAATTAT+AGG | + | chr1.4:80254384-80254403 | None:intergenic | 35.0% | |
| AAGATCTTATGCTCTCTATC+TGG | - | chr1.4:80253497-80253516 | MS.gene26890:CDS | 35.0% | |
| AAGTAATGAAGCGCGTATAA+AGG | + | chr1.4:80256462-80256481 | None:intergenic | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | - | chr1.4:80255800-80255819 | MS.gene26890:intron | 35.0% | |
| ACATCTTAGACTTGACATGA+GGG | + | chr1.4:80254551-80254570 | None:intergenic | 35.0% | |
| ACTACAGAAAGGATTTAGAG+AGG | - | chr1.4:80256688-80256707 | MS.gene26890:CDS | 35.0% | |
| CAGCATACTATCTCTCTAAT+CGG | + | chr1.4:80254711-80254730 | None:intergenic | 35.0% | |
| CCCAGTAAAAGTTAAAACAC+TGG | - | chr1.4:80254747-80254766 | MS.gene26890:intron | 35.0% | |
| CTAATAGCACAAACAACTCA+TGG | - | chr1.4:80255447-80255466 | MS.gene26890:intron | 35.0% | |
| CTATATTTGAAGAACTGCTG+AGG | - | chr1.4:80256067-80256086 | MS.gene26890:intron | 35.0% | |
| GAAGAGATGATAGAACTTGA+GGG | - | chr1.4:80255616-80255635 | MS.gene26890:intron | 35.0% | |
| GACATGACTAATAGCATAAG+AGG | + | chr1.4:80255351-80255370 | None:intergenic | 35.0% | |
| GTAAAAGTTAAAACACTGGC+TGG | - | chr1.4:80254751-80254770 | MS.gene26890:intron | 35.0% | |
| GTCTTAATGTCAGTAGTCAT+TGG | - | chr1.4:80255881-80255900 | MS.gene26890:intron | 35.0% | |
| TAAAAGTGATGCTGTGAATC+AGG | - | chr1.4:80255645-80255664 | MS.gene26890:intron | 35.0% | |
| TACAAAGCACGATAATCACA+CGG | + | chr1.4:80256405-80256424 | None:intergenic | 35.0% | |
| TGCTGCCTTCAAATTAAAGA+AGG | - | chr1.4:80254626-80254645 | MS.gene26890:intron | 35.0% | |
| TGTGATTATCGTGCTTTGTA+TGG | - | chr1.4:80256405-80256424 | MS.gene26890:intron | 35.0% | |
| TTCCTTAGCATAAAGCACAT+TGG | + | chr1.4:80256130-80256149 | None:intergenic | 35.0% | |
| ! | AGATGATTTTGTGAAGGTAG+AGG | - | chr1.4:80253878-80253897 | MS.gene26890:CDS | 35.0% |
| ! | AGGAATTGGTTTCTTTAGAG+AGG | - | chr1.4:80255665-80255684 | MS.gene26890:intron | 35.0% |
| ! | AGGCAATAAAGTGTTACAGA+AGG | - | chr1.4:80256574-80256593 | MS.gene26890:CDS | 35.0% |
| ! | GGAATTGGTTTCTTTAGAGA+GGG | - | chr1.4:80255666-80255685 | MS.gene26890:intron | 35.0% |
| ! | GGCAATAAAGTGTTACAGAA+GGG | - | chr1.4:80256575-80256594 | MS.gene26890:CDS | 35.0% |
| ! | GGTCTTATACTGAAACAGAA+AGG | - | chr1.4:80255745-80255764 | MS.gene26890:intron | 35.0% |
| ! | TATGCTAAGGAATGCTTTTC+TGG | - | chr1.4:80256138-80256157 | MS.gene26890:intron | 35.0% |
| ! | TTTGTGGGAAAGTCTGTTTT+GGG | - | chr1.4:80253943-80253962 | MS.gene26890:CDS | 35.0% |
| ! | TTTGTTGAGTTCCATTTTGG+GGG | - | chr1.4:80254019-80254038 | MS.gene26890:CDS | 35.0% |
| ! | TTTTGTGGGAAAGTCTGTTT+TGG | - | chr1.4:80253942-80253961 | MS.gene26890:CDS | 35.0% |
| !! | TGGATTAGTACATTGTGGTT+AGG | - | chr1.4:80253580-80253599 | MS.gene26890:CDS | 35.0% |
| !! | TTTTAAGAGAGCCCTTAAAC+TGG | - | chr1.4:80256275-80256294 | MS.gene26890:intron | 35.0% |
| !!! | ACTGAGTTTTTTTGGGGTTT+TGG | - | chr1.4:80255525-80255544 | MS.gene26890:intron | 35.0% |
| !!! | GCCAGTGTTTTAACTTTTAC+TGG | + | chr1.4:80254751-80254770 | None:intergenic | 35.0% |
| AAAACTTGGAAAGTAGGCAC+AGG | - | chr1.4:80254956-80254975 | MS.gene26890:intron | 40.0% | |
| AACGTCGTCGTTTAAGGAAT+AGG | + | chr1.4:80253161-80253180 | None:intergenic | 40.0% | |
| AAGAAGAACTGAAGAAGCAG+AGG | - | chr1.4:80256785-80256804 | MS.gene26890:CDS | 40.0% | |
| AATCGCAAAAAGCTCAACTC+TGG | - | chr1.4:80254231-80254250 | MS.gene26890:CDS | 40.0% | |
| ACAAAGCACGATAATCACAC+GGG | + | chr1.4:80256404-80256423 | None:intergenic | 40.0% | |
| ACAACAAACTTCCGTGTTAG+TGG | - | chr1.4:80254293-80254312 | MS.gene26890:CDS | 40.0% | |
| ACACGTCTTCTCGATTATAC+TGG | - | chr1.4:80256816-80256835 | MS.gene26890:CDS | 40.0% | |
| ACATACGAAACACCTGCAAT+CGG | + | chr1.4:80253339-80253358 | None:intergenic | 40.0% | |
| ACATTAGGCCAGAACATAGA+AGG | - | chr1.4:80254428-80254447 | MS.gene26890:CDS | 40.0% | |
| ACGTCGTCGTTTAAGGAATA+GGG | + | chr1.4:80253160-80253179 | None:intergenic | 40.0% | |
| ACTGACATGTCATCTCTTCA+TGG | - | chr1.4:80254523-80254542 | MS.gene26890:intron | 40.0% | |
| ACTGAGCATGTAGCAACATT+AGG | - | chr1.4:80254413-80254432 | MS.gene26890:CDS | 40.0% | |
| AGCAAAGCCTCAATCATGTT+AGG | + | chr1.4:80256738-80256757 | None:intergenic | 40.0% | |
| ATAGACTGCCTTCTATGTTC+TGG | + | chr1.4:80254439-80254458 | None:intergenic | 40.0% | |
| ATCGCAAAAAGCTCAACTCT+GGG | - | chr1.4:80254232-80254251 | MS.gene26890:CDS | 40.0% | |
| ATGATAGAACTTGAGGGTCT+GGG | - | chr1.4:80255622-80255641 | MS.gene26890:intron | 40.0% | |
| CACATCTTAGACTTGACATG+AGG | + | chr1.4:80254552-80254571 | None:intergenic | 40.0% | |
| CAGAAAGGATTTAGAGAGGA+TGG | - | chr1.4:80256692-80256711 | MS.gene26890:CDS | 40.0% | |
| CATCTTAGACTTGACATGAG+GGG | + | chr1.4:80254550-80254569 | None:intergenic | 40.0% | |
| CATGTTCTACGGGATCAAAT+TGG | - | chr1.4:80253456-80253475 | MS.gene26890:CDS | 40.0% | |
| CCAGTCTCTACCAAAAACTA+AGG | - | chr1.4:80255923-80255942 | MS.gene26890:intron | 40.0% | |
| CGTATCCCGAGATCTATTTA+AGG | + | chr1.4:80253666-80253685 | None:intergenic | 40.0% | |
| CTCCAATGTGCTTTATGCTA+AGG | - | chr1.4:80256125-80256144 | MS.gene26890:intron | 40.0% | |
| GGAAGAGATGATAGAACTTG+AGG | - | chr1.4:80255615-80255634 | MS.gene26890:intron | 40.0% | |
| GGAATAGGGAAAATGAGAGA+AGG | + | chr1.4:80253146-80253165 | None:intergenic | 40.0% | |
| GTGGAAGTTCAAGTATTCGT+CGG | - | chr1.4:80253280-80253299 | MS.gene26890:CDS | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | - | chr1.4:80255806-80255825 | MS.gene26890:intron | 40.0% | |
| TACAATGAACAAAGCACACC+AGG | - | chr1.4:80254498-80254517 | MS.gene26890:intron | 40.0% | |
| TAGCAAATATCCCCCCAAAA+TGG | + | chr1.4:80254033-80254052 | None:intergenic | 40.0% | |
| TATCGTGCTTTGTATGGACT+AGG | - | chr1.4:80256411-80256430 | MS.gene26890:intron | 40.0% | |
| TCATGAATACTCTATGGGCA+AGG | + | chr1.4:80256173-80256192 | None:intergenic | 40.0% | |
| TGATGCTGTGAATCAGGAAT+TGG | - | chr1.4:80255651-80255670 | MS.gene26890:intron | 40.0% | |
| TGTCAGTAGTCATTGGATGA+AGG | - | chr1.4:80255888-80255907 | MS.gene26890:intron | 40.0% | |
| ! | ACGACGAGATGATTTTGTGA+AGG | - | chr1.4:80253872-80253891 | MS.gene26890:CDS | 40.0% |
| ! | CTGTTACACAAACTGACTTC+AGG | - | chr1.4:80255229-80255248 | MS.gene26890:intron | 40.0% |
| ! | GATCAATTGTGCCATTCTTG+CGG | + | chr1.4:80255705-80255724 | None:intergenic | 40.0% |
| ! | GGCAGCATTTTACTACAGAA+AGG | - | chr1.4:80256677-80256696 | MS.gene26890:CDS | 40.0% |
| ! | GGTGTGTATGTTGTGTTGAT+GGG | - | chr1.4:80253807-80253826 | MS.gene26890:CDS | 40.0% |
| ! | GTATTGATGAAAATGCAGGG+CGG | - | chr1.4:80253188-80253207 | MS.gene26890:intron | 40.0% |
| ! | TTGTTGAGTTCCATTTTGGG+GGG | - | chr1.4:80254020-80254039 | MS.gene26890:CDS | 40.0% |
| !! | ATTTGCTATGTCGTCAGTTC+AGG | - | chr1.4:80254045-80254064 | MS.gene26890:CDS | 40.0% |
| !! | TGATTTCTAGCTGGTTCGTT+TGG | - | chr1.4:80253613-80253632 | MS.gene26890:CDS | 40.0% |
| !!! | CCTTAGTTTTTGGTAGAGAC+TGG | + | chr1.4:80255926-80255945 | None:intergenic | 40.0% |
| AATTCACGCCTTCGAATACG+AGG | - | chr1.4:80253250-80253269 | MS.gene26890:CDS | 45.0% | |
| ACTCTGAATGCAGCTTTGCA+AGG | + | chr1.4:80256641-80256660 | None:intergenic | 45.0% | |
| AGAGAGCTGCTCATGTTCTA+CGG | - | chr1.4:80253445-80253464 | MS.gene26890:CDS | 45.0% | |
| AGAGGATGGAATCTGAAGAG+AGG | - | chr1.4:80256706-80256725 | MS.gene26890:CDS | 45.0% | |
| AGCATAAGAGGCAGAAGACT+AGG | + | chr1.4:80255339-80255358 | None:intergenic | 45.0% | |
| ATCCACAGTCGGGAATCATT+TGG | + | chr1.4:80256507-80256526 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+AGG | - | chr1.4:80256711-80256730 | MS.gene26890:CDS | 45.0% | |
| CGTTGAAACCTCGTATTCGA+AGG | + | chr1.4:80253261-80253280 | None:intergenic | 45.0% | |
| CTCTCTGCTTGGACACTTAT+GGG | - | chr1.4:80256309-80256328 | MS.gene26890:intron | 45.0% | |
| GAGCAGCTCTCTTGTATTCA+CGG | + | chr1.4:80253437-80253456 | None:intergenic | 45.0% | |
| GAGGATGGAATCTGAAGAGA+GGG | - | chr1.4:80256707-80256726 | MS.gene26890:CDS | 45.0% | |
| GAGGATTGATCCTTACAGAG+TGG | - | chr1.4:80256086-80256105 | MS.gene26890:intron | 45.0% | |
| GATGATAGAACTTGAGGGTC+TGG | - | chr1.4:80255621-80255640 | MS.gene26890:intron | 45.0% | |
| GCAAAGCTGCATTCAGAGTT+GGG | - | chr1.4:80256642-80256661 | MS.gene26890:CDS | 45.0% | |
| GGAAGGACCTAACATGATTG+AGG | - | chr1.4:80256728-80256747 | MS.gene26890:CDS | 45.0% | |
| GGGCATCAAACTGTGATGAT+GGG | - | chr1.4:80256595-80256614 | MS.gene26890:CDS | 45.0% | |
| GGGTGTGTATGTTGTGTTGA+TGG | - | chr1.4:80253806-80253825 | MS.gene26890:CDS | 45.0% | |
| GTCAGTTCAGGATAGCACAA+CGG | - | chr1.4:80254057-80254076 | MS.gene26890:CDS | 45.0% | |
| GTCTCTATTCCGCTTCCAAA+TGG | - | chr1.4:80253079-80253098 | MS.gene26890:CDS | 45.0% | |
| TATTTCAACAGCCCGACGAT+AGG | + | chr1.4:80256379-80256398 | None:intergenic | 45.0% | |
| TCCACAGTCGGGAATCATTT+GGG | + | chr1.4:80256506-80256525 | None:intergenic | 45.0% | |
| TCCATGTCTTCCACTCTGTA+AGG | + | chr1.4:80256099-80256118 | None:intergenic | 45.0% | |
| TCCTTACAGAGTGGAAGACA+TGG | - | chr1.4:80256095-80256114 | MS.gene26890:intron | 45.0% | |
| TCGAATACGAGGTTTCAACG+TGG | - | chr1.4:80253261-80253280 | MS.gene26890:CDS | 45.0% | |
| TCTCTCTGCTTGGACACTTA+TGG | - | chr1.4:80256308-80256327 | MS.gene26890:intron | 45.0% | |
| TGCAAAGCTGCATTCAGAGT+TGG | - | chr1.4:80256641-80256660 | MS.gene26890:CDS | 45.0% | |
| TTGTCTACACTCCGCAAGAA+TGG | - | chr1.4:80255691-80255710 | MS.gene26890:intron | 45.0% | |
| ! | AGGGCATCAAACTGTGATGA+TGG | - | chr1.4:80256594-80256613 | MS.gene26890:CDS | 45.0% |
| ! | AGTGCTGTTGGAACGTAAGT+TGG | - | chr1.4:80254674-80254693 | MS.gene26890:intron | 45.0% |
| ! | CCTGCAGTCATCTCAGTTTT+GGG | + | chr1.4:80254093-80254112 | None:intergenic | 45.0% |
| ! | CTGCAGTCATCTCAGTTTTG+GGG | + | chr1.4:80254092-80254111 | None:intergenic | 45.0% |
| ! | GGCATCAAACTGTGATGATG+GGG | - | chr1.4:80256596-80256615 | MS.gene26890:CDS | 45.0% |
| ! | GGGCTTTAGCAATTTGAGCT+TGG | + | chr1.4:80256014-80256033 | None:intergenic | 45.0% |
| ! | TCCTGCAGTCATCTCAGTTT+TGG | + | chr1.4:80254094-80254113 | None:intergenic | 45.0% |
| ! | TGGACTAGGACAAGCTTATG+AGG | - | chr1.4:80256425-80256444 | MS.gene26890:intron | 45.0% |
| ! | TTAAAACACTGGCTGGCTGT+TGG | - | chr1.4:80254758-80254777 | MS.gene26890:intron | 45.0% |
| ! | TTCGAAGGCGTGAATTTCGA+TGG | + | chr1.4:80253246-80253265 | None:intergenic | 45.0% |
| !! | CACGGAAGTTTGTTGTGTCA+CGG | + | chr1.4:80254289-80254308 | None:intergenic | 45.0% |
| !! | CTGGCTGTTGGCCTTAAAAT+TGG | - | chr1.4:80254770-80254789 | MS.gene26890:intron | 45.0% |
| !! | GAAGTTTGTTGTGTCACGGT+GGG | + | chr1.4:80254285-80254304 | None:intergenic | 45.0% |
| !! | TGGGAAAGTCTGTTTTGGGT+TGG | - | chr1.4:80253947-80253966 | MS.gene26890:CDS | 45.0% |
| !!! | GAAAGTCTGTTTTGGGTTGG+GGG | - | chr1.4:80253950-80253969 | MS.gene26890:CDS | 45.0% |
| !!! | GGAAAGTCTGTTTTGGGTTG+GGG | - | chr1.4:80253949-80253968 | MS.gene26890:CDS | 45.0% |
| !!! | GGGAAAGTCTGTTTTGGGTT+GGG | - | chr1.4:80253948-80253967 | MS.gene26890:CDS | 45.0% |
| ACCCAAATGATTCCCGACTG+TGG | - | chr1.4:80256502-80256521 | MS.gene26890:intron | 50.0% | |
| ACGATAGGCATTCACAGCAG+CGG | + | chr1.4:80256364-80256383 | None:intergenic | 50.0% | |
| ACTTCGTCCTCCTCCATAAC+CGG | + | chr1.4:80253369-80253388 | None:intergenic | 50.0% | |
| AGCCATTGCTATCCACAGTC+GGG | + | chr1.4:80256517-80256536 | None:intergenic | 50.0% | |
| CCATTCTCTGCACTTCCTAC+AGG | - | chr1.4:80255573-80255592 | MS.gene26890:intron | 50.0% | |
| CCCAAAACTGAGATGACTGC+AGG | - | chr1.4:80254090-80254109 | MS.gene26890:CDS | 50.0% | |
| CTGCTGTGAATGCCTATCGT+CGG | - | chr1.4:80256364-80256383 | MS.gene26890:intron | 50.0% | |
| GAGAGCTGCTCATGTTCTAC+GGG | - | chr1.4:80253446-80253465 | MS.gene26890:CDS | 50.0% | |
| GAGATGACATGTCAGTCACC+TGG | + | chr1.4:80254519-80254538 | None:intergenic | 50.0% | |
| GAGCCATTGCTATCCACAGT+CGG | + | chr1.4:80256518-80256537 | None:intergenic | 50.0% | |
| GAGGAGGACGAAGTTGTTGA+TGG | - | chr1.4:80253375-80253394 | MS.gene26890:CDS | 50.0% | |
| GGCAGGAGAAAAGCGAAAAG+AGG | - | chr1.4:80255594-80255613 | MS.gene26890:intron | 50.0% | |
| GGCAGTTAGCACCACTAACA+CGG | + | chr1.4:80254307-80254326 | None:intergenic | 50.0% | |
| TAAGGATTGCAGCTCAGTCC+AGG | + | chr1.4:80255836-80255855 | None:intergenic | 50.0% | |
| TCCAGGCATTCCAGTTCCAA+GGG | + | chr1.4:80255819-80255838 | None:intergenic | 50.0% | |
| TGCTGTGAATGCCTATCGTC+GGG | - | chr1.4:80256365-80256384 | MS.gene26890:intron | 50.0% | |
| TGTTTCGTATGTCGCTACGC+CGG | - | chr1.4:80253347-80253366 | MS.gene26890:CDS | 50.0% | |
| TTCCCGACTGTGGATAGCAA+TGG | - | chr1.4:80256512-80256531 | MS.gene26890:intron | 50.0% | |
| TTGATGAAAATGCAGGGCGG+CGG | - | chr1.4:80253191-80253210 | MS.gene26890:intron | 50.0% | |
| TTTGGCGCGTACAGTTCTTG+TGG | - | chr1.4:80255777-80255796 | MS.gene26890:intron | 50.0% | |
| ! | CCTGTAGGAAGTGCAGAGAA+TGG | + | chr1.4:80255576-80255595 | None:intergenic | 50.0% |
| !! | AGCTCAACTCTGGGATGCTA+TGG | - | chr1.4:80254241-80254260 | MS.gene26890:CDS | 50.0% |
| !! | GGAAGTTTGTTGTGTCACGG+TGG | + | chr1.4:80254286-80254305 | None:intergenic | 50.0% |
| !! | TTCGCTTTTCTCCTGCCTGT+AGG | + | chr1.4:80255591-80255610 | None:intergenic | 50.0% |
| ACCCTTGGAACTGGAATGCC+TGG | - | chr1.4:80255815-80255834 | MS.gene26890:intron | 55.0% | |
| AGAGTTGGGACGCACTGAAG+AGG | - | chr1.4:80256656-80256675 | MS.gene26890:CDS | 55.0% | |
| CCAGCTTCGCAAGCTTGATG+AGG | - | chr1.4:80256554-80256573 | MS.gene26890:CDS | 55.0% | |
| CCTCATCAAGCTTGCGAAGC+TGG | + | chr1.4:80256557-80256576 | None:intergenic | 55.0% | |
| CGATAGGCATTCACAGCAGC+GGG | + | chr1.4:80256363-80256382 | None:intergenic | 55.0% | |
| GTCCAGGCATTCCAGTTCCA+AGG | + | chr1.4:80255820-80255839 | None:intergenic | 55.0% | |
| TCTCTGCACTTCCTACAGGC+AGG | - | chr1.4:80255577-80255596 | MS.gene26890:intron | 55.0% | |
| ! | ACAATGACGACGCCGATTGC+AGG | - | chr1.4:80253324-80253343 | MS.gene26890:CDS | 55.0% |
| ! | GTATGTCGCTACGCCGGTTA+TGG | - | chr1.4:80253353-80253372 | MS.gene26890:CDS | 55.0% |
| !! | GGAAAGTGCTCAACATCCGC+TGG | + | chr1.4:80257020-80257039 | None:intergenic | 55.0% |
| CTGGGATGCTATGGCGTGTG+TGG | - | chr1.4:80254250-80254269 | MS.gene26890:CDS | 60.0% | |
| GGATGCTATGGCGTGTGTGG+AGG | - | chr1.4:80254253-80254272 | MS.gene26890:CDS | 60.0% | |
| ! | TGTCGCTACGCCGGTTATGG+AGG | - | chr1.4:80253356-80253375 | MS.gene26890:CDS | 60.0% |
| AGGGCGGCGGAGCAATTGGT+AGG | - | chr1.4:80253204-80253223 | MS.gene26890:intron | 65.0% | |
| ATGCAGGGCGGCGGAGCAAT+TGG | - | chr1.4:80253200-80253219 | MS.gene26890:intron | 65.0% | |
| ! | CGCTACGCCGGTTATGGAGG+AGG | - | chr1.4:80253359-80253378 | MS.gene26890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 80253015 | 80257046 | 80253015 | ID=MS.gene26890 |
| chr1.4 | mRNA | 80253015 | 80257046 | 80253015 | ID=MS.gene26890.t1;Parent=MS.gene26890 |
| chr1.4 | exon | 80256961 | 80257046 | 80256961 | ID=MS.gene26890.t1.exon1;Parent=MS.gene26890.t1 |
| chr1.4 | CDS | 80256961 | 80257046 | 80256961 | ID=cds.MS.gene26890.t1;Parent=MS.gene26890.t1 |
| chr1.4 | exon | 80256543 | 80256855 | 80256543 | ID=MS.gene26890.t1.exon2;Parent=MS.gene26890.t1 |
| chr1.4 | CDS | 80256543 | 80256855 | 80256543 | ID=cds.MS.gene26890.t1;Parent=MS.gene26890.t1 |
| chr1.4 | exon | 80253219 | 80254466 | 80253219 | ID=MS.gene26890.t1.exon3;Parent=MS.gene26890.t1 |
| chr1.4 | CDS | 80253219 | 80254466 | 80253219 | ID=cds.MS.gene26890.t1;Parent=MS.gene26890.t1 |
| chr1.4 | exon | 80253015 | 80253104 | 80253015 | ID=MS.gene26890.t1.exon4;Parent=MS.gene26890.t1 |
| chr1.4 | CDS | 80253015 | 80253104 | 80253015 | ID=cds.MS.gene26890.t1;Parent=MS.gene26890.t1 |
| Gene Sequence |
| Protein sequence |
