Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006458.t1 | XP_013469843.1 | 98.8 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 2.90E-266 | 927.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006458.t1 | Q9STS3 | 75.1 | 579 | 141 | 3 | 1 | 577 | 1 | 578 | 3.1e-200 | 699.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006458.t1 | A0A072VQG1 | 98.8 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 2.1e-266 | 927.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44181 | MS.gene006458 | PPI |
| MS.gene56523 | MS.gene006458 | PPI |
| MS.gene38996 | MS.gene006458 | PPI |
| MS.gene006458 | MS.gene057101 | PPI |
| MS.gene005307 | MS.gene006458 | PPI |
| MS.gene32240 | MS.gene006458 | PPI |
| MS.gene95446 | MS.gene006458 | PPI |
| MS.gene48038 | MS.gene006458 | PPI |
| MS.gene40797 | MS.gene006458 | PPI |
| MS.gene007855 | MS.gene006458 | PPI |
| MS.gene43188 | MS.gene006458 | PPI |
| MS.gene006458 | MS.gene93612 | PPI |
| MS.gene96778 | MS.gene006458 | PPI |
| MS.gene038286 | MS.gene006458 | PPI |
| MS.gene43131 | MS.gene006458 | PPI |
| MS.gene006802 | MS.gene006458 | PPI |
| MS.gene97314 | MS.gene006458 | PPI |
| MS.gene017070 | MS.gene006458 | PPI |
| MS.gene032323 | MS.gene006458 | PPI |
| MS.gene93598 | MS.gene006458 | PPI |
| MS.gene031482 | MS.gene006458 | PPI |
| MS.gene56142 | MS.gene006458 | PPI |
| MS.gene022091 | MS.gene006458 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006458.t1 | MTR_1g103750 | 98.789 | 578 | 7 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1187 |
| MS.gene006458.t1 | MTR_8g021140 | 86.528 | 579 | 73 | 4 | 1 | 577 | 1 | 576 | 0.0 | 1043 |
| MS.gene006458.t1 | MTR_8g447330 | 46.118 | 425 | 123 | 14 | 1 | 366 | 1 | 378 | 1.60e-96 | 300 |
| MS.gene006458.t1 | MTR_8g447330 | 74.737 | 95 | 24 | 0 | 410 | 504 | 284 | 378 | 7.21e-43 | 158 |
| MS.gene006458.t1 | MTR_6g016680 | 30.035 | 283 | 189 | 3 | 213 | 495 | 411 | 684 | 6.96e-29 | 122 |
| MS.gene006458.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 358 | 649 | 8.77e-28 | 118 |
| MS.gene006458.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 372 | 663 | 9.79e-28 | 118 |
| MS.gene006458.t1 | MTR_2g019850 | 25.095 | 263 | 194 | 3 | 233 | 495 | 211 | 470 | 9.88e-14 | 74.3 |
| MS.gene006458.t1 | MTR_1g079510 | 24.590 | 305 | 179 | 6 | 281 | 547 | 107 | 398 | 9.18e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006458.t1 | AT3G48150 | 74.093 | 579 | 147 | 3 | 1 | 577 | 1 | 578 | 0.0 | 913 |
| MS.gene006458.t1 | AT3G48150 | 74.839 | 465 | 116 | 1 | 114 | 577 | 1 | 465 | 0.0 | 749 |
| MS.gene006458.t1 | AT2G20000 | 27.476 | 313 | 216 | 3 | 254 | 564 | 434 | 737 | 2.14e-27 | 117 |
| MS.gene006458.t1 | AT3G16320 | 30.385 | 260 | 171 | 3 | 241 | 495 | 401 | 655 | 1.14e-24 | 109 |
| MS.gene006458.t1 | AT3G16320 | 30.385 | 260 | 171 | 3 | 241 | 495 | 390 | 644 | 1.27e-24 | 108 |
| MS.gene006458.t1 | AT2G20000 | 33.155 | 187 | 125 | 0 | 254 | 440 | 434 | 620 | 1.37e-24 | 108 |
| MS.gene006458.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 401 | 544 | 1.04e-15 | 80.9 |
| MS.gene006458.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 390 | 533 | 1.05e-15 | 80.5 |
Find 112 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 1.2:-77290778 | MS.gene006458:CDS |
| TCTCTCTGCTTGGACACTTA+TGG | 0.199975 | 1.2:-77290677 | MS.gene006458:CDS |
| TGGGAATTATTACAGTTTAA+AGG | 0.204204 | 1.2:-77290758 | MS.gene006458:CDS |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 1.2:-77290777 | MS.gene006458:CDS |
| CTCTCTGCTTGGACACTTAT+GGG | 0.273049 | 1.2:-77290676 | MS.gene006458:CDS |
| TATCAGTCATGAATACTCTA+TGG | 0.285092 | 1.2:+77290809 | None:intergenic |
| GGGAATTATTACAGTTTAAA+GGG | 0.286813 | 1.2:-77290757 | MS.gene006458:CDS |
| GAATATTTACTCGGAACTTT+TGG | 0.289586 | 1.2:-77291012 | MS.gene006458:CDS |
| ACAGAAAGGCAATGATAATT+TGG | 0.300674 | 1.2:-77291226 | MS.gene006458:CDS |
| GTATATTGCTACTTCGGTTA+TGG | 0.315880 | 1.2:-77293581 | MS.gene006458:CDS |
| CATGTTCTTCGTGATCAAAT+TGG | 0.320943 | 1.2:-77293478 | MS.gene006458:CDS |
| AAGATCTTATGCTCTCTATC+TGG | 0.346201 | 1.2:-77293437 | MS.gene006458:intron |
| CAAATTCTTTCAAACTGTAC+TGG | 0.353720 | 1.2:+77290953 | None:intergenic |
| TAAAAGTGATGCGGTGAATC+AGG | 0.366270 | 1.2:-77291340 | MS.gene006458:CDS |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 1.2:+77290778 | None:intergenic |
| GATGATAGAACTTGAGGGTC+TGG | 0.368699 | 1.2:-77291364 | MS.gene006458:CDS |
| ATCCACAGTCGGGAATCATT+TGG | 0.376499 | 1.2:+77290481 | None:intergenic |
| AAGTAATGAAGCGCGTATAA+AGG | 0.384843 | 1.2:+77290526 | None:intergenic |
| CCTCATCGAGCTTGCGAAGC+TGG | 0.400023 | 1.2:+77290431 | None:intergenic |
| ACAATGACAACGCCGATTGC+AGG | 0.406835 | 1.2:-77293610 | MS.gene006458:CDS |
| GCAAAGCTGCATTCAGAGTT+GGG | 0.408786 | 1.2:-77290343 | MS.gene006458:CDS |
| TGTGATTATCGTGCTTTGTA+TGG | 0.409421 | 1.2:-77290580 | MS.gene006458:CDS |
| ATGCAGGGCGGCGGAGCAAT+TGG | 0.413245 | 1.2:-77293734 | MS.gene006458:intron |
| TCCACAGTCGGGAATCATTT+GGG | 0.420700 | 1.2:+77290482 | None:intergenic |
| ACCATATAAGTACAAACAAA+AGG | 0.420898 | 1.2:+77291260 | None:intergenic |
| GAGGATGGAATCTGAAGAGA+GGG | 0.426699 | 1.2:-77290278 | MS.gene006458:CDS |
| TGATGCGGTGAATCAGGAAT+TGG | 0.435489 | 1.2:-77291334 | MS.gene006458:CDS |
| AATATCAACTGAAGTGCATA+AGG | 0.439777 | 1.2:+77291134 | None:intergenic |
| GTCTCTATTCCGCTTCCAAA+TGG | 0.440463 | 1.2:-77293855 | MS.gene006458:intron |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | 1.2:-77291179 | MS.gene006458:CDS |
| TGCAAAGCTGCATTCAGAGT+TGG | 0.452965 | 1.2:-77290344 | MS.gene006458:CDS |
| GTCTTAATGTCAGTAGTCAT+TGG | 0.455741 | 1.2:-77291104 | MS.gene006458:CDS |
| ACCCTTGGAACTGGAATGCC+TGG | 0.456175 | 1.2:-77291170 | MS.gene006458:CDS |
| TGCTACTTCGGTTATGGAAG+AGG | 0.457622 | 1.2:-77293575 | MS.gene006458:CDS |
| AGGAATTGGTTTCTTTAGAG+AGG | 0.470455 | 1.2:-77291320 | MS.gene006458:CDS |
| AGGGCATCAAACTGTGATGA+TGG | 0.471291 | 1.2:-77290391 | MS.gene006458:CDS |
| GGGCTTTAGCAATTTGAGCT+TGG | 0.481121 | 1.2:+77290974 | None:intergenic |
| AGCAAAGCCTCAATCATGTT+AGG | 0.482273 | 1.2:+77290250 | None:intergenic |
| TTGTCTACACTCCGCAAGAA+TGG | 0.490832 | 1.2:-77291294 | MS.gene006458:CDS |
| CAGAAAGGATTTAGAGAGGA+TGG | 0.495031 | 1.2:-77290293 | MS.gene006458:CDS |
| CTGCTGTGAATGCCTATCGT+CGG | 0.496961 | 1.2:-77290621 | MS.gene006458:CDS |
| ACACGTCTTCTCGATTATAC+TGG | 0.497476 | 1.2:-77290169 | MS.gene006458:CDS |
| AGAGGATGGAATCTGAAGAG+AGG | 0.500780 | 1.2:-77290279 | MS.gene006458:CDS |
| TCCATGTCTTCCACTCTGTA+AGG | 0.501402 | 1.2:+77290889 | None:intergenic |
| TGCTGTGAATGCCTATCGTC+GGG | 0.506475 | 1.2:-77290620 | MS.gene006458:CDS |
| CTCCAATGTGCTTTATGCTA+AGG | 0.506539 | 1.2:-77290860 | MS.gene006458:CDS |
| AAATTCTTTCAAACTGTACT+GGG | 0.511198 | 1.2:+77290954 | None:intergenic |
| GAAGAGATGATAGAACTTGA+GGG | 0.512391 | 1.2:-77291369 | MS.gene006458:CDS |
| GGAAGAGATGATAGAACTTG+AGG | 0.513786 | 1.2:-77291370 | MS.gene006458:CDS |
| TGTCAGTAGTCATTGGATGA+AGG | 0.516391 | 1.2:-77291097 | MS.gene006458:CDS |
| ATGATAGAACTTGAGGGTCT+GGG | 0.520445 | 1.2:-77291363 | MS.gene006458:CDS |
| TGGACTAGGACAAGCTTATG+AGG | 0.520816 | 1.2:-77290560 | MS.gene006458:CDS |
| GGGCATCAAACTGTGATGAT+GGG | 0.526275 | 1.2:-77290390 | MS.gene006458:CDS |
| TAAGGATTGCAGCTCAGTCC+AGG | 0.528177 | 1.2:+77291152 | None:intergenic |
| TGTTTCGTATATTGCTACTT+CGG | 0.530883 | 1.2:-77293587 | MS.gene006458:CDS |
| TTCGAAGGCGTGAATTTCGA+TGG | 0.532573 | 1.2:+77293691 | None:intergenic |
| GAAGAGGATGAAGGTGTTGA+CGG | 0.533390 | 1.2:-77293559 | MS.gene006458:CDS |
| AGCCATTGCTATCCACAGTC+GGG | 0.535467 | 1.2:+77290471 | None:intergenic |
| TTTGGCGCGTACAGTTCTTG+TGG | 0.535552 | 1.2:-77291208 | MS.gene006458:CDS |
| CGATAGGCATTCACAGCAGC+GGG | 0.537165 | 1.2:+77290625 | None:intergenic |
| CCATATAAGTACAAACAAAA+GGG | 0.545143 | 1.2:+77291261 | None:intergenic |
| GTCCAGGCATTCCAGTTCCA+AGG | 0.545231 | 1.2:+77291168 | None:intergenic |
| GGAAAGTGCTCAACATCCGC+TGG | 0.547287 | 1.2:+77289968 | None:intergenic |
| GGAATTGGTTTCTTTAGAGA+GGG | 0.550127 | 1.2:-77291319 | MS.gene006458:CDS |
| TATCGTGCTTTGTATGGACT+AGG | 0.552484 | 1.2:-77290574 | MS.gene006458:CDS |
| GATCTATTGTTCCATTCTTG+CGG | 0.552490 | 1.2:+77291283 | None:intergenic |
| TGAAATATACCATTTGGAAG+CGG | 0.554816 | 1.2:+77293846 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | 1.2:-77291185 | MS.gene006458:CDS |
| GCAGAAGCAGATGAGTTCAA+AGG | 0.564871 | 1.2:-77293929 | None:intergenic |
| ATCAGTCATGAATACTCTAT+GGG | 0.566494 | 1.2:+77290810 | None:intergenic |
| ATATACGAAACACCTGCAAT+CGG | 0.567580 | 1.2:+77293598 | None:intergenic |
| ACTCTGAATGCAGCTTTGCA+AGG | 0.569872 | 1.2:+77290347 | None:intergenic |
| CGCTGAAACCTCGTATTCGA+AGG | 0.578774 | 1.2:+77293676 | None:intergenic |
| GGAATTATTACAGTTTAAAG+GGG | 0.578878 | 1.2:-77290756 | MS.gene006458:CDS |
| GGTCTTATACTGAAACAGAA+AGG | 0.579233 | 1.2:-77291240 | MS.gene006458:CDS |
| TATTTCAACAGCCCGACGAT+AGG | 0.582252 | 1.2:+77290609 | None:intergenic |
| AGAGTTGGGACGCACTGAAG+AGG | 0.583415 | 1.2:-77290329 | MS.gene006458:CDS |
| GAGCCATTGCTATCCACAGT+CGG | 0.589081 | 1.2:+77290470 | None:intergenic |
| TCGGTTATGGAAGAGGATGA+AGG | 0.589702 | 1.2:-77293568 | MS.gene006458:CDS |
| TCAAAATATGAATATTTACT+CGG | 0.590894 | 1.2:-77291021 | MS.gene006458:CDS |
| TCCTTACAGAGTGGAAGACA+TGG | 0.592201 | 1.2:-77290890 | MS.gene006458:CDS |
| TTCCTTAGCATAAAGCACAT+TGG | 0.592234 | 1.2:+77290858 | None:intergenic |
| GAGAAGAACTGAAGAAGCAG+AGG | 0.594801 | 1.2:-77290200 | MS.gene006458:CDS |
| TCATTGTAATCTCATGAGTA+CGG | 0.594829 | 1.2:+77293626 | None:intergenic |
| AGGCAATAAAGTGTTACAGA+AGG | 0.600848 | 1.2:-77290411 | MS.gene006458:CDS |
| AGGGCGGCGGAGCAATTGGT+AGG | 0.602481 | 1.2:-77293730 | MS.gene006458:CDS |
| TTGATGAAAATGCAGGGCGG+CGG | 0.604789 | 1.2:-77293743 | MS.gene006458:intron |
| GGCAATAAAGTGTTACAGAA+GGG | 0.606652 | 1.2:-77290410 | MS.gene006458:CDS |
| GGAAGGACCTAACATGATTG+AGG | 0.608692 | 1.2:-77290257 | MS.gene006458:CDS |
| TCCAGGCATTCCAGTTCCAA+GGG | 0.610042 | 1.2:+77291169 | None:intergenic |
| GGCATCAAACTGTGATGATG+GGG | 0.611034 | 1.2:-77290389 | MS.gene006458:CDS |
| AAGTGCTCAACATCCGCTGG+AGG | 0.612692 | 1.2:+77289971 | None:intergenic |
| ACTACAGAAAGGATTTAGAG+AGG | 0.616904 | 1.2:-77290297 | MS.gene006458:CDS |
| ACAATCTAGTTTCCCTCCAG+CGG | 0.619234 | 1.2:-77289984 | MS.gene006458:CDS |
| TTCCCGACTGTGGATAGCAA+TGG | 0.623157 | 1.2:-77290473 | MS.gene006458:CDS |
| TCATGAATACTCTATGGGCA+AGG | 0.627413 | 1.2:+77290815 | None:intergenic |
| GAGCAGCTCTCTTATACTCA+CGG | 0.629368 | 1.2:+77293500 | None:intergenic |
| AGTGCTCAACATCCGCTGGA+GGG | 0.630408 | 1.2:+77289972 | None:intergenic |
| TACAAAGCACGATAATCACA+CGG | 0.635868 | 1.2:+77290583 | None:intergenic |
| CTATATTTGAAGAACTGCTG+AGG | 0.641049 | 1.2:-77290918 | MS.gene006458:CDS |
| AATTCACGCCTTCGAATACG+AGG | 0.641925 | 1.2:-77293684 | MS.gene006458:CDS |
| GTGGAAGTTCAAGTATTCGT+CGG | 0.649300 | 1.2:-77293654 | MS.gene006458:CDS |
| CCAGCTTCGCAAGCTCGATG+AGG | 0.649439 | 1.2:-77290431 | MS.gene006458:CDS |
| ATGGAATCTGAAGAGAGGGA+AGG | 0.651788 | 1.2:-77290274 | MS.gene006458:CDS |
| GCTGGAGGGAAACTAGATTG+TGG | 0.669682 | 1.2:+77289986 | None:intergenic |
| TTCATCAAAAGACATTATGG+AGG | 0.673231 | 1.2:+77289947 | None:intergenic |
| ACGATAGGCATTCACAGCAG+CGG | 0.679646 | 1.2:+77290624 | None:intergenic |
| GAGGATTGATCCTTACAGAG+TGG | 0.688847 | 1.2:-77290899 | MS.gene006458:CDS |
| ACCCAAATGATTCCCGACTG+TGG | 0.691891 | 1.2:-77290483 | MS.gene006458:CDS |
| ACAAAGCACGATAATCACAC+GGG | 0.717331 | 1.2:+77290584 | None:intergenic |
| GGGTCTGGGTAAAAGTGATG+CGG | 0.758419 | 1.2:-77291349 | MS.gene006458:CDS |
| TCGAATACGAGGTTTCAGCG+TGG | 0.759283 | 1.2:-77293673 | MS.gene006458:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTGATTATTAAATGATT+TGG | + | chr1.2:77293821-77293840 | None:intergenic | 15.0% |
| !! | TACTAATAAACTATAATTAC+TGG | - | chr1.2:77291061-77291080 | MS.gene006458:CDS | 15.0% |
| !! | TCAAAATATGAATATTTACT+CGG | - | chr1.2:77292859-77292878 | MS.gene006458:intron | 15.0% |
| !! | TTTCAAAAATAACTAAAAAG+CGG | + | chr1.2:77291990-77292009 | None:intergenic | 15.0% |
| !!! | CTATTAACATTTTGTTTAAA+AGG | - | chr1.2:77291717-77291736 | MS.gene006458:intron | 15.0% |
| !!! | CTTTTAAACAAAATGTTAAT+AGG | + | chr1.2:77291719-77291738 | None:intergenic | 15.0% |
| !!! | TATTAGAAATACCAATTTTA+AGG | + | chr1.2:77291689-77291708 | None:intergenic | 15.0% |
| !!! | TCAGATTTAATTTTAAAAGA+TGG | + | chr1.2:77291557-77291576 | None:intergenic | 15.0% |
| !!! | TTTGAATTTTCTGTTTATAT+GGG | - | chr1.2:77290751-77290770 | MS.gene006458:CDS | 15.0% |
| !! | AAACGTTACTTGATATATTT+AGG | - | chr1.2:77291021-77291040 | MS.gene006458:CDS | 20.0% |
| !! | AAGGAATAGATATTTAGATT+AGG | + | chr1.2:77290073-77290092 | None:intergenic | 20.0% |
| !! | AGGAATAGATATTTAGATTA+GGG | + | chr1.2:77290072-77290091 | None:intergenic | 20.0% |
| !! | ATTAACACAAACTTTAGTAA+CGG | - | chr1.2:77290818-77290837 | MS.gene006458:CDS | 20.0% |
| !! | CTAAATGAAGATAATACATT+GGG | - | chr1.2:77292313-77292332 | MS.gene006458:intron | 20.0% |
| !! | TCAAATCAAATAAAAGAGAA+TGG | + | chr1.2:77291363-77291382 | None:intergenic | 20.0% |
| !! | TCTAAATGAAGATAATACAT+TGG | - | chr1.2:77292312-77292331 | MS.gene006458:intron | 20.0% |
| !!! | AGAAAAAAATCTTTTCGAAA+AGG | + | chr1.2:77292191-77292210 | None:intergenic | 20.0% |
| !!! | ATAATTTTTGTCCAGTTTAA+GGG | + | chr1.2:77293184-77293203 | None:intergenic | 20.0% |
| !!! | GAAAAAAATCTTTTCGAAAA+GGG | + | chr1.2:77292190-77292209 | None:intergenic | 20.0% |
| !!! | GAAATTATTTTTACCAACAT+TGG | - | chr1.2:77290506-77290525 | MS.gene006458:CDS | 20.0% |
| !!! | GTTAAATATTTTTTACTCAC+AGG | + | chr1.2:77293738-77293757 | None:intergenic | 20.0% |
| !!! | GTTTGAATTTTCTGTTTATA+TGG | - | chr1.2:77290750-77290769 | MS.gene006458:CDS | 20.0% |
| !!! | TACTTTCCAAGTTTTATTTA+CGG | + | chr1.2:77291856-77291875 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTGATTTGAGTT+GGG | - | chr1.2:77291366-77291385 | MS.gene006458:CDS | 20.0% |
| !!! | TTTTATAATGTCAAATGCAT+TGG | - | chr1.2:77290681-77290700 | MS.gene006458:CDS | 20.0% |
| ! | AAAGCATATGTTGTCAATAA+TGG | + | chr1.2:77291227-77291246 | None:intergenic | 25.0% |
| ! | AAATTCTTTCAAACTGTACT+GGG | + | chr1.2:77292929-77292948 | None:intergenic | 25.0% |
| ! | AATTCCTATAATTGTTGAAG+TGG | - | chr1.2:77291276-77291295 | MS.gene006458:CDS | 25.0% |
| ! | ACCATATAAGTACAAACAAA+AGG | + | chr1.2:77292623-77292642 | None:intergenic | 25.0% |
| ! | ACTTTGATGTAGTAGTATTA+TGG | - | chr1.2:77290724-77290743 | MS.gene006458:CDS | 25.0% |
| ! | ATTCCTATAATTGTTGAAGT+GGG | - | chr1.2:77291277-77291296 | MS.gene006458:CDS | 25.0% |
| ! | CCATATAAGTACAAACAAAA+GGG | + | chr1.2:77292622-77292641 | None:intergenic | 25.0% |
| ! | GGAATTATTACAGTTTAAAG+GGG | - | chr1.2:77293124-77293143 | MS.gene006458:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+GGG | - | chr1.2:77293123-77293142 | MS.gene006458:intron | 25.0% |
| ! | GTAAATAAAACTTGGAAAGT+AGG | - | chr1.2:77291855-77291874 | MS.gene006458:intron | 25.0% |
| ! | TACATTATACACGAAATTGT+TGG | - | chr1.2:77290648-77290667 | MS.gene006458:CDS | 25.0% |
| ! | TGGGAATTATTACAGTTTAA+AGG | - | chr1.2:77293122-77293141 | MS.gene006458:intron | 25.0% |
| ! | TTAACTCCTTAAATAGATCT+CGG | - | chr1.2:77290603-77290622 | MS.gene006458:CDS | 25.0% |
| !! | ATTTTGTTGAGTTCCATTTT+GGG | - | chr1.2:77290968-77290987 | MS.gene006458:CDS | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | - | chr1.2:77293103-77293122 | MS.gene006458:intron | 25.0% |
| !! | GAAGTTTGAAATATACCATT+TGG | + | chr1.2:77290043-77290062 | None:intergenic | 25.0% |
| !! | GATAATTTTTGTCCAGTTTA+AGG | + | chr1.2:77293185-77293204 | None:intergenic | 25.0% |
| !! | GTGTTTACTTCAATTTTTGT+GGG | - | chr1.2:77290879-77290898 | MS.gene006458:CDS | 25.0% |
| !! | TATATTCAAGTTAAAGCATG+AGG | - | chr1.2:77291964-77291983 | MS.gene006458:intron | 25.0% |
| !! | TGTGTTTACTTCAATTTTTG+TGG | - | chr1.2:77290878-77290897 | MS.gene006458:CDS | 25.0% |
| !!! | ATTTGAATTTGATTTCTAGC+TGG | - | chr1.2:77290550-77290569 | MS.gene006458:CDS | 25.0% |
| !!! | CTCTTTTATTTGATTTGAGT+TGG | - | chr1.2:77291365-77291384 | MS.gene006458:CDS | 25.0% |
| !!! | TATGACCTTCTTTAATTTGA+AGG | + | chr1.2:77291533-77291552 | None:intergenic | 25.0% |
| !!! | TATTTTTACCAACATTGGAT+TGG | - | chr1.2:77290511-77290530 | MS.gene006458:CDS | 25.0% |
| !!! | TGAAAGAACTGAGTTTTTTT+GGG | - | chr1.2:77292413-77292432 | MS.gene006458:intron | 25.0% |
| !!! | TTGAAAGAACTGAGTTTTTT+TGG | - | chr1.2:77292412-77292431 | MS.gene006458:intron | 25.0% |
| AATATCAACTGAAGTGCATA+AGG | + | chr1.2:77292749-77292768 | None:intergenic | 30.0% | |
| ACAAAAATTATCTCTCTGCT+TGG | - | chr1.2:77293193-77293212 | MS.gene006458:intron | 30.0% | |
| ACAGAAAGGCAATGATAATT+TGG | - | chr1.2:77292654-77292673 | MS.gene006458:intron | 30.0% | |
| ACTGCAAAAAGTTTACTTAG+AGG | - | chr1.2:77293861-77293880 | MS.gene006458:CDS | 30.0% | |
| AGAAAACGTGAGAAGTTAAA+TGG | + | chr1.2:77292283-77292302 | None:intergenic | 30.0% | |
| ATAATCAAAGTCATGCTTTC+AGG | - | chr1.2:77293830-77293849 | MS.gene006458:intron | 30.0% | |
| ATATTACACACACAACTTCA+TGG | + | chr1.2:77291754-77291773 | None:intergenic | 30.0% | |
| ATCAGTCATGAATACTCTAT+GGG | + | chr1.2:77293073-77293092 | None:intergenic | 30.0% | |
| CAAATTCTTTCAAACTGTAC+TGG | + | chr1.2:77292930-77292949 | None:intergenic | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | + | chr1.2:77293105-77293124 | None:intergenic | 30.0% | |
| TAACTCCTTAAATAGATCTC+GGG | - | chr1.2:77290604-77290623 | MS.gene006458:CDS | 30.0% | |
| TATCAGTCATGAATACTCTA+TGG | + | chr1.2:77293074-77293093 | None:intergenic | 30.0% | |
| TCATTGTAATCTCATGAGTA+CGG | + | chr1.2:77290257-77290276 | None:intergenic | 30.0% | |
| TCTTAAAAACATTCTGCTTC+AGG | + | chr1.2:77291927-77291946 | None:intergenic | 30.0% | |
| TGAAATATACCATTTGGAAG+CGG | + | chr1.2:77290037-77290056 | None:intergenic | 30.0% | |
| TGGAAAAACATATGTTGTGA+GGG | - | chr1.2:77290579-77290598 | MS.gene006458:CDS | 30.0% | |
| TGGAGTTCTTATGTTTATTG+TGG | - | chr1.2:77290701-77290720 | MS.gene006458:CDS | 30.0% | |
| TTAAATCTGATTAGTGCTGT+TGG | - | chr1.2:77291567-77291586 | MS.gene006458:intron | 30.0% | |
| TTCCTATAATTGTTGAAGTG+GGG | - | chr1.2:77291278-77291297 | MS.gene006458:CDS | 30.0% | |
| TTGACAAAACTAACCATAAG+AGG | + | chr1.2:77292215-77292234 | None:intergenic | 30.0% | |
| TTGGAAAAACATATGTTGTG+AGG | - | chr1.2:77290578-77290597 | MS.gene006458:CDS | 30.0% | |
| ! | CCTGAATCTTGTTGTATTAT+TGG | - | chr1.2:77293102-77293121 | MS.gene006458:intron | 30.0% |
| ! | GAATATTTACTCGGAACTTT+TGG | - | chr1.2:77292868-77292887 | MS.gene006458:intron | 30.0% |
| ! | GATTTTGTTGAGTTCCATTT+TGG | - | chr1.2:77290967-77290986 | MS.gene006458:CDS | 30.0% |
| ! | TGACGGTGATTTTTATCTTT+TGG | - | chr1.2:77290338-77290357 | MS.gene006458:CDS | 30.0% |
| ! | TGTTTCGTATATTGCTACTT+CGG | - | chr1.2:77290293-77290312 | MS.gene006458:CDS | 30.0% |
| ! | TTCGTATTGATGAAAATGCA+GGG | - | chr1.2:77290131-77290150 | MS.gene006458:intron | 30.0% |
| ! | TTTCGTATTGATGAAAATGC+AGG | - | chr1.2:77290130-77290149 | MS.gene006458:intron | 30.0% |
| ! | TTTTGTTGAGTTCCATTTTG+GGG | - | chr1.2:77290969-77290988 | MS.gene006458:CDS | 30.0% |
| !! | CATTATGCATCCTTAGTTTT+TGG | + | chr1.2:77292831-77292850 | None:intergenic | 30.0% |
| !! | CCCTTTTGTTTGTACTTATA+TGG | - | chr1.2:77292619-77292638 | MS.gene006458:intron | 30.0% |
| !!! | AGATTTTTTTCTGCCTCTTA+TGG | - | chr1.2:77292199-77292218 | MS.gene006458:intron | 30.0% |
| !!! | CCAGAGTTTTAACTTTTACT+GGG | + | chr1.2:77291655-77291674 | None:intergenic | 30.0% |
| !!! | GAAAGAACTGAGTTTTTTTG+GGG | - | chr1.2:77292414-77292433 | MS.gene006458:intron | 30.0% |
| AAATGAAACGTCGTCGTTTA+AGG | + | chr1.2:77290113-77290132 | None:intergenic | 35.0% | |
| AACCCCACTTCAACAATTAT+AGG | + | chr1.2:77291283-77291302 | None:intergenic | 35.0% | |
| AAGATCTTATGCTCTCTATC+TGG | - | chr1.2:77290443-77290462 | MS.gene006458:CDS | 35.0% | |
| AAGTAATGAAGCGCGTATAA+AGG | + | chr1.2:77293357-77293376 | None:intergenic | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | - | chr1.2:77292695-77292714 | MS.gene006458:intron | 35.0% | |
| ACAATGTACCAATCCAATGT+TGG | + | chr1.2:77290522-77290541 | None:intergenic | 35.0% | |
| ACATCTTAGACTTGACATGA+GGG | + | chr1.2:77291450-77291469 | None:intergenic | 35.0% | |
| ACTACAGAAAGGATTTAGAG+AGG | - | chr1.2:77293583-77293602 | MS.gene006458:CDS | 35.0% | |
| ACTGAGCATGTAGTAACATT+AGG | - | chr1.2:77291312-77291331 | MS.gene006458:CDS | 35.0% | |
| ATATACGAAACACCTGCAAT+CGG | + | chr1.2:77290285-77290304 | None:intergenic | 35.0% | |
| CATGTTCTTCGTGATCAAAT+TGG | - | chr1.2:77290402-77290421 | MS.gene006458:CDS | 35.0% | |
| CCCAGTAAAAGTTAAAACTC+TGG | - | chr1.2:77291652-77291671 | MS.gene006458:intron | 35.0% | |
| CGTCTTCCGTAAATAAAACT+TGG | - | chr1.2:77291847-77291866 | MS.gene006458:intron | 35.0% | |
| CTAATAGCACAAACAACTCA+TGG | - | chr1.2:77292348-77292367 | MS.gene006458:intron | 35.0% | |
| CTAATCCCGAGATCTATTTA+AGG | + | chr1.2:77290612-77290631 | None:intergenic | 35.0% | |
| CTATATTTGAAGAACTGCTG+AGG | - | chr1.2:77292962-77292981 | MS.gene006458:intron | 35.0% | |
| GAAGAGATGATAGAACTTGA+GGG | - | chr1.2:77292511-77292530 | MS.gene006458:intron | 35.0% | |
| GACATGACTAATAGCATAAG+AGG | + | chr1.2:77292252-77292271 | None:intergenic | 35.0% | |
| GATCTATTGTTCCATTCTTG+CGG | + | chr1.2:77292600-77292619 | None:intergenic | 35.0% | |
| GTAAAAGTTAAAACTCTGGC+TGG | - | chr1.2:77291656-77291675 | MS.gene006458:intron | 35.0% | |
| GTCTTAATGTCAGTAGTCAT+TGG | - | chr1.2:77292776-77292795 | MS.gene006458:intron | 35.0% | |
| TACAAAGCACGATAATCACA+CGG | + | chr1.2:77293300-77293319 | None:intergenic | 35.0% | |
| TGCTGCCTTCAAATTAAAGA+AGG | - | chr1.2:77291525-77291544 | MS.gene006458:intron | 35.0% | |
| TGTGATTATCGTGCTTTGTA+TGG | - | chr1.2:77293300-77293319 | MS.gene006458:intron | 35.0% | |
| TTCCTTAGCATAAAGCACAT+TGG | + | chr1.2:77293025-77293044 | None:intergenic | 35.0% | |
| ! | AGGAATTGGTTTCTTTAGAG+AGG | - | chr1.2:77292560-77292579 | MS.gene006458:intron | 35.0% |
| ! | AGGCAATAAAGTGTTACAGA+AGG | - | chr1.2:77293469-77293488 | MS.gene006458:CDS | 35.0% |
| ! | GGAATTGGTTTCTTTAGAGA+GGG | - | chr1.2:77292561-77292580 | MS.gene006458:intron | 35.0% |
| ! | GGCAATAAAGTGTTACAGAA+GGG | - | chr1.2:77293470-77293489 | MS.gene006458:CDS | 35.0% |
| ! | GGTCTTATACTGAAACAGAA+AGG | - | chr1.2:77292640-77292659 | MS.gene006458:intron | 35.0% |
| ! | GTATATTGCTACTTCGGTTA+TGG | - | chr1.2:77290299-77290318 | MS.gene006458:CDS | 35.0% |
| ! | TATGCTAAGGAATGCTTTTC+TGG | - | chr1.2:77293033-77293052 | MS.gene006458:intron | 35.0% |
| ! | TTTGTGGGAAAGTCTGTTTT+GGG | - | chr1.2:77290894-77290913 | MS.gene006458:CDS | 35.0% |
| ! | TTTGTTGAGTTCCATTTTGG+GGG | - | chr1.2:77290970-77290989 | MS.gene006458:CDS | 35.0% |
| ! | TTTTGTGGGAAAGTCTGTTT+TGG | - | chr1.2:77290893-77290912 | MS.gene006458:CDS | 35.0% |
| !! | AACATTGGATTGGTACATTG+TGG | - | chr1.2:77290521-77290540 | MS.gene006458:CDS | 35.0% |
| !! | TTTTAAGAGAGCCCTTAAAC+TGG | - | chr1.2:77293170-77293189 | MS.gene006458:intron | 35.0% |
| !!! | ACTGAGTTTTTTTGGGGTTT+TGG | - | chr1.2:77292420-77292439 | MS.gene006458:intron | 35.0% |
| !!! | GCCAGAGTTTTAACTTTTAC+TGG | + | chr1.2:77291656-77291675 | None:intergenic | 35.0% |
| AAAACTTGGAAAGTAGGCAC+AGG | - | chr1.2:77291861-77291880 | MS.gene006458:intron | 40.0% | |
| AAAGTCATGCTTTCAGGAGA+GGG | - | chr1.2:77293836-77293855 | MS.gene006458:intron | 40.0% | |
| AACGTCGTCGTTTAAGGAAT+AGG | + | chr1.2:77290107-77290126 | None:intergenic | 40.0% | |
| AATCGCAAAAAGCTCAACTC+TGG | - | chr1.2:77291129-77291148 | MS.gene006458:CDS | 40.0% | |
| ACAAAGCACGATAATCACAC+GGG | + | chr1.2:77293299-77293318 | None:intergenic | 40.0% | |
| ACACGTCTTCTCGATTATAC+TGG | - | chr1.2:77293711-77293730 | MS.gene006458:CDS | 40.0% | |
| ACATTAGGCCAGAACATAGA+AGG | - | chr1.2:77291327-77291346 | MS.gene006458:CDS | 40.0% | |
| ACGTCGTCGTTTAAGGAATA+GGG | + | chr1.2:77290106-77290125 | None:intergenic | 40.0% | |
| ACTGACATGTCATCTCTTCA+TGG | - | chr1.2:77291422-77291441 | MS.gene006458:intron | 40.0% | |
| AGCAAAGCCTCAATCATGTT+AGG | + | chr1.2:77293633-77293652 | None:intergenic | 40.0% | |
| ATAGACTGCCTTCTATGTTC+TGG | + | chr1.2:77291338-77291357 | None:intergenic | 40.0% | |
| ATCGCAAAAAGCTCAACTCT+GGG | - | chr1.2:77291130-77291149 | MS.gene006458:CDS | 40.0% | |
| ATGATAGAACTTGAGGGTCT+GGG | - | chr1.2:77292517-77292536 | MS.gene006458:intron | 40.0% | |
| CACATCTTAGACTTGACATG+AGG | + | chr1.2:77291451-77291470 | None:intergenic | 40.0% | |
| CAGAAAGGATTTAGAGAGGA+TGG | - | chr1.2:77293587-77293606 | MS.gene006458:CDS | 40.0% | |
| CCAGTCTCTACCAAAAACTA+AGG | - | chr1.2:77292818-77292837 | MS.gene006458:intron | 40.0% | |
| CTCCAATGTGCTTTATGCTA+AGG | - | chr1.2:77293020-77293039 | MS.gene006458:intron | 40.0% | |
| GGAAGAGATGATAGAACTTG+AGG | - | chr1.2:77292510-77292529 | MS.gene006458:intron | 40.0% | |
| GGAATAGGGAAAATGAGAGA+AGG | + | chr1.2:77290092-77290111 | None:intergenic | 40.0% | |
| GTGGAAGTTCAAGTATTCGT+CGG | - | chr1.2:77290226-77290245 | MS.gene006458:CDS | 40.0% | |
| TAAAAGTGATGCGGTGAATC+AGG | - | chr1.2:77292540-77292559 | MS.gene006458:intron | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | - | chr1.2:77292701-77292720 | MS.gene006458:intron | 40.0% | |
| TACAATGAACAAAGCACACC+AGG | - | chr1.2:77291397-77291416 | MS.gene006458:intron | 40.0% | |
| TATCGTGCTTTGTATGGACT+AGG | - | chr1.2:77293306-77293325 | MS.gene006458:intron | 40.0% | |
| TCATGAATACTCTATGGGCA+AGG | + | chr1.2:77293068-77293087 | None:intergenic | 40.0% | |
| TGTCAGTAGTCATTGGATGA+AGG | - | chr1.2:77292783-77292802 | MS.gene006458:intron | 40.0% | |
| ! | AGTGCTGTTGGAAAGTAAGT+TGG | - | chr1.2:77291579-77291598 | MS.gene006458:intron | 40.0% |
| ! | CTGTTACACAAACTGACTTC+AGG | - | chr1.2:77292130-77292149 | MS.gene006458:intron | 40.0% |
| ! | GGCAGCATTTTACTACAGAA+AGG | - | chr1.2:77293572-77293591 | MS.gene006458:CDS | 40.0% |
| ! | GGTGTGTATGTTGTGTTGAT+GGG | - | chr1.2:77290772-77290791 | MS.gene006458:CDS | 40.0% |
| ! | GTATTGATGAAAATGCAGGG+CGG | - | chr1.2:77290134-77290153 | MS.gene006458:intron | 40.0% |
| ! | TTGTTGAGTTCCATTTTGGG+GGG | - | chr1.2:77290971-77290990 | MS.gene006458:CDS | 40.0% |
| !! | ATTTGATTTGAGTTGGGTGC+AGG | - | chr1.2:77291372-77291391 | MS.gene006458:CDS | 40.0% |
| !! | TGATTTCTAGCTGGTTCGTT+TGG | - | chr1.2:77290559-77290578 | MS.gene006458:CDS | 40.0% |
| !! | TGGATTGGTACATTGTGGTT+AGG | - | chr1.2:77290526-77290545 | MS.gene006458:CDS | 40.0% |
| !! | TTTGATTTGAGTTGGGTGCA+GGG | - | chr1.2:77291373-77291392 | MS.gene006458:CDS | 40.0% |
| !!! | CCTTAGTTTTTGGTAGAGAC+TGG | + | chr1.2:77292821-77292840 | None:intergenic | 40.0% |
| AATTCACGCCTTCGAATACG+AGG | - | chr1.2:77290196-77290215 | MS.gene006458:CDS | 45.0% | |
| ACTCTGAATGCAGCTTTGCA+AGG | + | chr1.2:77293536-77293555 | None:intergenic | 45.0% | |
| AGAGGATGGAATCTGAAGAG+AGG | - | chr1.2:77293601-77293620 | MS.gene006458:CDS | 45.0% | |
| AGCATAAGAGGCAGAAGACT+AGG | + | chr1.2:77292240-77292259 | None:intergenic | 45.0% | |
| ATCCACAGTCGGGAATCATT+TGG | + | chr1.2:77293402-77293421 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+AGG | - | chr1.2:77293606-77293625 | MS.gene006458:CDS | 45.0% | |
| CAAAGTCATGCTTTCAGGAG+AGG | - | chr1.2:77293835-77293854 | MS.gene006458:intron | 45.0% | |
| CTCTCTGCTTGGACACTTAT+GGG | - | chr1.2:77293204-77293223 | MS.gene006458:intron | 45.0% | |
| GAGAAGAACTGAAGAAGCAG+AGG | - | chr1.2:77293680-77293699 | MS.gene006458:CDS | 45.0% | |
| GAGCAGCTCTCTTATACTCA+CGG | + | chr1.2:77290383-77290402 | None:intergenic | 45.0% | |
| GAGGATGGAATCTGAAGAGA+GGG | - | chr1.2:77293602-77293621 | MS.gene006458:CDS | 45.0% | |
| GAGGATTGATCCTTACAGAG+TGG | - | chr1.2:77292981-77293000 | MS.gene006458:intron | 45.0% | |
| GATGATAGAACTTGAGGGTC+TGG | - | chr1.2:77292516-77292535 | MS.gene006458:intron | 45.0% | |
| GCAAAGCTGCATTCAGAGTT+GGG | - | chr1.2:77293537-77293556 | MS.gene006458:CDS | 45.0% | |
| GCATAAGAGGCAGAAGACTA+GGG | + | chr1.2:77292239-77292258 | None:intergenic | 45.0% | |
| GGAAGGACCTAACATGATTG+AGG | - | chr1.2:77293623-77293642 | MS.gene006458:CDS | 45.0% | |
| GGCAGGAGAAAAGCAAAAAG+AGG | - | chr1.2:77292489-77292508 | MS.gene006458:intron | 45.0% | |
| GGGCATCAAACTGTGATGAT+GGG | - | chr1.2:77293490-77293509 | MS.gene006458:CDS | 45.0% | |
| GGGTGTGTATGTTGTGTTGA+TGG | - | chr1.2:77290771-77290790 | MS.gene006458:CDS | 45.0% | |
| GTCTCTATTCCGCTTCCAAA+TGG | - | chr1.2:77290025-77290044 | MS.gene006458:CDS | 45.0% | |
| TATTTCAACAGCCCGACGAT+AGG | + | chr1.2:77293274-77293293 | None:intergenic | 45.0% | |
| TCCACAGTCGGGAATCATTT+GGG | + | chr1.2:77293401-77293420 | None:intergenic | 45.0% | |
| TCCATGTCTTCCACTCTGTA+AGG | + | chr1.2:77292994-77293013 | None:intergenic | 45.0% | |
| TCCTTACAGAGTGGAAGACA+TGG | - | chr1.2:77292990-77293009 | MS.gene006458:intron | 45.0% | |
| TCGGTTATGGAAGAGGATGA+AGG | - | chr1.2:77290312-77290331 | MS.gene006458:CDS | 45.0% | |
| TCTCTCTGCTTGGACACTTA+TGG | - | chr1.2:77293203-77293222 | MS.gene006458:intron | 45.0% | |
| TGATGCGGTGAATCAGGAAT+TGG | - | chr1.2:77292546-77292565 | MS.gene006458:intron | 45.0% | |
| TGCAAAGCTGCATTCAGAGT+TGG | - | chr1.2:77293536-77293555 | MS.gene006458:CDS | 45.0% | |
| TTGTCTACACTCCGCAAGAA+TGG | - | chr1.2:77292586-77292605 | MS.gene006458:intron | 45.0% | |
| ! | ACAATCTAGTTTCCCTCCAG+CGG | - | chr1.2:77293896-77293915 | MS.gene006458:CDS | 45.0% |
| ! | AGGGCATCAAACTGTGATGA+TGG | - | chr1.2:77293489-77293508 | MS.gene006458:CDS | 45.0% |
| ! | GGCATCAAACTGTGATGATG+GGG | - | chr1.2:77293491-77293510 | MS.gene006458:CDS | 45.0% |
| ! | GGGCTTTAGCAATTTGAGCT+TGG | + | chr1.2:77292909-77292928 | None:intergenic | 45.0% |
| ! | TGCTACTTCGGTTATGGAAG+AGG | - | chr1.2:77290305-77290324 | MS.gene006458:CDS | 45.0% |
| ! | TGGACTAGGACAAGCTTATG+AGG | - | chr1.2:77293320-77293339 | MS.gene006458:intron | 45.0% |
| ! | TTAAAACTCTGGCTGGCTGT+TGG | - | chr1.2:77291663-77291682 | MS.gene006458:intron | 45.0% |
| ! | TTCGAAGGCGTGAATTTCGA+TGG | + | chr1.2:77290192-77290211 | None:intergenic | 45.0% |
| !! | CTGGCTGTTGGCCTTAAAAT+TGG | - | chr1.2:77291675-77291694 | MS.gene006458:intron | 45.0% |
| !! | GAAGAGGATGAAGGTGTTGA+CGG | - | chr1.2:77290321-77290340 | MS.gene006458:CDS | 45.0% |
| !! | TGGGAAAGTCTGTTTTGGGT+TGG | - | chr1.2:77290898-77290917 | MS.gene006458:CDS | 45.0% |
| !! | TTTGCTTTTCTCCTGCCTGT+AGG | + | chr1.2:77292486-77292505 | None:intergenic | 45.0% |
| !!! | GAAAGTCTGTTTTGGGTTGG+GGG | - | chr1.2:77290901-77290920 | MS.gene006458:CDS | 45.0% |
| !!! | GGAAAGTCTGTTTTGGGTTG+GGG | - | chr1.2:77290900-77290919 | MS.gene006458:CDS | 45.0% |
| !!! | GGGAAAGTCTGTTTTGGGTT+GGG | - | chr1.2:77290899-77290918 | MS.gene006458:CDS | 45.0% |
| ACCCAAATGATTCCCGACTG+TGG | - | chr1.2:77293397-77293416 | MS.gene006458:intron | 50.0% | |
| ACGACGAACTTCCGTGTTAG+CGG | - | chr1.2:77291191-77291210 | MS.gene006458:CDS | 50.0% | |
| ACGATAGGCATTCACAGCAG+CGG | + | chr1.2:77293259-77293278 | None:intergenic | 50.0% | |
| AGCCATTGCTATCCACAGTC+GGG | + | chr1.2:77293412-77293431 | None:intergenic | 50.0% | |
| CGCTGAAACCTCGTATTCGA+AGG | + | chr1.2:77290207-77290226 | None:intergenic | 50.0% | |
| CTGCTGTGAATGCCTATCGT+CGG | - | chr1.2:77293259-77293278 | MS.gene006458:intron | 50.0% | |
| GAGATGACATGTCAGTCACC+TGG | + | chr1.2:77291418-77291437 | None:intergenic | 50.0% | |
| GAGCCATTGCTATCCACAGT+CGG | + | chr1.2:77293413-77293432 | None:intergenic | 50.0% | |
| GCTGGAGGGAAACTAGATTG+TGG | + | chr1.2:77293897-77293916 | None:intergenic | 50.0% | |
| GGGTCTGGGTAAAAGTGATG+CGG | - | chr1.2:77292531-77292550 | MS.gene006458:intron | 50.0% | |
| TAAGGATTGCAGCTCAGTCC+AGG | + | chr1.2:77292731-77292750 | None:intergenic | 50.0% | |
| TCATCTCAGTCCCCCCAAAA+TGG | + | chr1.2:77290984-77291003 | None:intergenic | 50.0% | |
| TCCAGGCATTCCAGTTCCAA+GGG | + | chr1.2:77292714-77292733 | None:intergenic | 50.0% | |
| TCGAATACGAGGTTTCAGCG+TGG | - | chr1.2:77290207-77290226 | MS.gene006458:CDS | 50.0% | |
| TGCTGTGAATGCCTATCGTC+GGG | - | chr1.2:77293260-77293279 | MS.gene006458:intron | 50.0% | |
| TTCCCGACTGTGGATAGCAA+TGG | - | chr1.2:77293407-77293426 | MS.gene006458:intron | 50.0% | |
| TTGATGAAAATGCAGGGCGG+CGG | - | chr1.2:77290137-77290156 | MS.gene006458:intron | 50.0% | |
| TTTGGCGCGTACAGTTCTTG+TGG | - | chr1.2:77292672-77292691 | MS.gene006458:intron | 50.0% | |
| ! | ACAATGACAACGCCGATTGC+AGG | - | chr1.2:77290270-77290289 | MS.gene006458:CDS | 50.0% |
| !! | AGCTCAACTCTGGGATGCTA+TGG | - | chr1.2:77291139-77291158 | MS.gene006458:CDS | 50.0% |
| AAGTGCTCAACATCCGCTGG+AGG | + | chr1.2:77293912-77293931 | None:intergenic | 55.0% | |
| ACCCTTGGAACTGGAATGCC+TGG | - | chr1.2:77292710-77292729 | MS.gene006458:intron | 55.0% | |
| AGAGTTGGGACGCACTGAAG+AGG | - | chr1.2:77293551-77293570 | MS.gene006458:CDS | 55.0% | |
| AGTGCTCAACATCCGCTGGA+GGG | + | chr1.2:77293911-77293930 | None:intergenic | 55.0% | |
| CACGGAAGTTCGTCGTGTCA+CGG | + | chr1.2:77291187-77291206 | None:intergenic | 55.0% | |
| CCATGCTCTGCACTTCCTAC+AGG | - | chr1.2:77292468-77292487 | MS.gene006458:intron | 55.0% | |
| CGATAGGCATTCACAGCAGC+GGG | + | chr1.2:77293258-77293277 | None:intergenic | 55.0% | |
| GAAGTTCGTCGTGTCACGGT+GGG | + | chr1.2:77291183-77291202 | None:intergenic | 55.0% | |
| GCCAGTTAGCACCGCTAACA+CGG | + | chr1.2:77291205-77291224 | None:intergenic | 55.0% | |
| GTCCAGGCATTCCAGTTCCA+AGG | + | chr1.2:77292715-77292734 | None:intergenic | 55.0% | |
| ! | CCTGTAGGAAGTGCAGAGCA+TGG | + | chr1.2:77292471-77292490 | None:intergenic | 55.0% |
| ! | TCCGTGTTAGCGGTGCTAAC+TGG | - | chr1.2:77291201-77291220 | MS.gene006458:CDS | 55.0% |
| !! | GGAAAGTGCTCAACATCCGC+TGG | + | chr1.2:77293915-77293934 | None:intergenic | 55.0% |
| CCAGCTTCGCAAGCTCGATG+AGG | - | chr1.2:77293449-77293468 | MS.gene006458:CDS | 60.0% | |
| CCTCATCGAGCTTGCGAAGC+TGG | + | chr1.2:77293452-77293471 | None:intergenic | 60.0% | |
| CTGGGATGCTATGGCGTGTG+TGG | - | chr1.2:77291148-77291167 | MS.gene006458:CDS | 60.0% | |
| GCTCTGCACTTCCTACAGGC+AGG | - | chr1.2:77292472-77292491 | MS.gene006458:intron | 60.0% | |
| GGAAGTTCGTCGTGTCACGG+TGG | + | chr1.2:77291184-77291203 | None:intergenic | 60.0% | |
| GGATGCTATGGCGTGTGTGG+AGG | - | chr1.2:77291151-77291170 | MS.gene006458:CDS | 60.0% | |
| AGGGCGGCGGAGCAATTGGT+AGG | - | chr1.2:77290150-77290169 | MS.gene006458:intron | 65.0% | |
| ATGCAGGGCGGCGGAGCAAT+TGG | - | chr1.2:77290146-77290165 | MS.gene006458:intron | 65.0% | |
| GGGGGGACTGAGATGACTGC+AGG | - | chr1.2:77290988-77291007 | MS.gene006458:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 77289961 | 77293941 | 77289961 | ID=MS.gene006458 |
| chr1.2 | mRNA | 77289961 | 77293941 | 77289961 | ID=MS.gene006458.t1;Parent=MS.gene006458 |
| chr1.2 | exon | 77293856 | 77293941 | 77293856 | ID=MS.gene006458.t1.exon1;Parent=MS.gene006458.t1 |
| chr1.2 | CDS | 77293856 | 77293941 | 77293856 | ID=cds.MS.gene006458.t1;Parent=MS.gene006458.t1 |
| chr1.2 | exon | 77293438 | 77293750 | 77293438 | ID=MS.gene006458.t1.exon2;Parent=MS.gene006458.t1 |
| chr1.2 | CDS | 77293438 | 77293750 | 77293438 | ID=cds.MS.gene006458.t1;Parent=MS.gene006458.t1 |
| chr1.2 | exon | 77290165 | 77291412 | 77290165 | ID=MS.gene006458.t1.exon3;Parent=MS.gene006458.t1 |
| chr1.2 | CDS | 77290165 | 77291412 | 77290165 | ID=cds.MS.gene006458.t1;Parent=MS.gene006458.t1 |
| chr1.2 | exon | 77289961 | 77290050 | 77289961 | ID=MS.gene006458.t1.exon4;Parent=MS.gene006458.t1 |
| chr1.2 | CDS | 77289961 | 77290050 | 77289961 | ID=cds.MS.gene006458.t1;Parent=MS.gene006458.t1 |
| Gene Sequence |
| Protein sequence |
