Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33573.t1 | XP_013469843.1 | 99 | 578 | 6 | 0 | 1 | 578 | 1 | 578 | 3.10E-268 | 934.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33573.t1 | Q9STS3 | 75.3 | 579 | 140 | 3 | 1 | 577 | 1 | 578 | 1.3e-201 | 704.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33573.t1 | A0A072VQG1 | 99.0 | 578 | 6 | 0 | 1 | 578 | 1 | 578 | 2.2e-268 | 934.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050297 | MS.gene33573 | 0.813828 | 2.10E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022091 | MS.gene33573 | PPI |
| MS.gene33573 | MS.gene057101 | PPI |
| MS.gene33573 | MS.gene93612 | PPI |
| MS.gene32240 | MS.gene33573 | PPI |
| MS.gene44181 | MS.gene33573 | PPI |
| MS.gene56523 | MS.gene33573 | PPI |
| MS.gene38996 | MS.gene33573 | PPI |
| MS.gene95446 | MS.gene33573 | PPI |
| MS.gene40797 | MS.gene33573 | PPI |
| MS.gene005307 | MS.gene33573 | PPI |
| MS.gene038286 | MS.gene33573 | PPI |
| MS.gene48038 | MS.gene33573 | PPI |
| MS.gene006802 | MS.gene33573 | PPI |
| MS.gene007855 | MS.gene33573 | PPI |
| MS.gene43188 | MS.gene33573 | PPI |
| MS.gene96778 | MS.gene33573 | PPI |
| MS.gene031482 | MS.gene33573 | PPI |
| MS.gene33573 | MS.gene93598 | PPI |
| MS.gene43131 | MS.gene33573 | PPI |
| MS.gene56142 | MS.gene33573 | PPI |
| MS.gene97314 | MS.gene33573 | PPI |
| MS.gene017070 | MS.gene33573 | PPI |
| MS.gene032323 | MS.gene33573 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33573.t1 | MTR_1g103750 | 98.962 | 578 | 6 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1193 |
| MS.gene33573.t1 | MTR_8g021140 | 86.874 | 579 | 71 | 4 | 1 | 577 | 1 | 576 | 0.0 | 1049 |
| MS.gene33573.t1 | MTR_8g447330 | 46.353 | 425 | 122 | 14 | 1 | 366 | 1 | 378 | 8.94e-98 | 303 |
| MS.gene33573.t1 | MTR_8g447330 | 74.737 | 95 | 24 | 0 | 410 | 504 | 284 | 378 | 7.07e-43 | 158 |
| MS.gene33573.t1 | MTR_6g016680 | 30.035 | 283 | 189 | 3 | 213 | 495 | 411 | 684 | 7.08e-29 | 122 |
| MS.gene33573.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 358 | 649 | 8.08e-28 | 119 |
| MS.gene33573.t1 | MTR_7g019230 | 29.221 | 308 | 200 | 5 | 240 | 545 | 372 | 663 | 9.19e-28 | 118 |
| MS.gene33573.t1 | MTR_2g019850 | 25.095 | 263 | 194 | 3 | 233 | 495 | 211 | 470 | 9.29e-14 | 74.3 |
| MS.gene33573.t1 | MTR_1g079510 | 24.590 | 305 | 179 | 6 | 281 | 547 | 107 | 398 | 8.35e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33573.t1 | AT3G48150 | 74.266 | 579 | 146 | 3 | 1 | 577 | 1 | 578 | 0.0 | 917 |
| MS.gene33573.t1 | AT3G48150 | 75.054 | 465 | 115 | 1 | 114 | 577 | 1 | 465 | 0.0 | 751 |
| MS.gene33573.t1 | AT2G20000 | 27.476 | 313 | 216 | 3 | 254 | 564 | 434 | 737 | 2.32e-27 | 117 |
| MS.gene33573.t1 | AT3G16320 | 30.385 | 260 | 171 | 3 | 241 | 495 | 401 | 655 | 1.08e-24 | 109 |
| MS.gene33573.t1 | AT3G16320 | 30.385 | 260 | 171 | 3 | 241 | 495 | 390 | 644 | 1.20e-24 | 109 |
| MS.gene33573.t1 | AT2G20000 | 33.155 | 187 | 125 | 0 | 254 | 440 | 434 | 620 | 1.39e-24 | 108 |
| MS.gene33573.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 401 | 544 | 9.84e-16 | 80.9 |
| MS.gene33573.t1 | AT3G16320 | 32.639 | 144 | 95 | 1 | 241 | 382 | 390 | 533 | 1.05e-15 | 80.5 |
Find 116 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 1.3:-71110722 | MS.gene33573:CDS |
| TCTCTCTGCTTGGACACTTA+TGG | 0.199975 | 1.3:-71110621 | MS.gene33573:CDS |
| TGGGAATTATTACAGTTTAA+AGG | 0.204204 | 1.3:-71110702 | MS.gene33573:CDS |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 1.3:-71110721 | MS.gene33573:CDS |
| CTCTCTGCTTGGACACTTAT+GGG | 0.273049 | 1.3:-71110620 | MS.gene33573:CDS |
| TATCAGTCATGAATACTCTA+TGG | 0.285092 | 1.3:+71110753 | None:intergenic |
| GGGAATTATTACAGTTTAAA+GGG | 0.286813 | 1.3:-71110701 | MS.gene33573:CDS |
| GAATATTTACTCGGAACTTT+TGG | 0.289586 | 1.3:-71110956 | MS.gene33573:CDS |
| ACAGAAAGGCAATGATAATT+TGG | 0.300674 | 1.3:-71111170 | MS.gene33573:CDS |
| GTATGTCGCTACGCCGGTTA+TGG | 0.319352 | 1.3:-71113604 | MS.gene33573:CDS |
| AAGATCTTATGCTCTCTATC+TGG | 0.346201 | 1.3:-71113460 | MS.gene33573:intron |
| CAAATTCTTTCAAACTGTAC+TGG | 0.353720 | 1.3:+71110897 | None:intergenic |
| TAAAAGTGATGCGGTGAATC+AGG | 0.366270 | 1.3:-71111284 | MS.gene33573:CDS |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 1.3:+71110722 | None:intergenic |
| GATGATAGAACTTGAGGGTC+TGG | 0.368699 | 1.3:-71111308 | MS.gene33573:CDS |
| ATCCACAGTCGGGAATCATT+TGG | 0.376499 | 1.3:+71110425 | None:intergenic |
| AAGTAATGAAGCGCGTATAA+AGG | 0.384843 | 1.3:+71110470 | None:intergenic |
| CCTCATCGAGCTTGCGAAGC+TGG | 0.400023 | 1.3:+71110375 | None:intergenic |
| GCAAAGCTGCATTCAGAGTT+GGG | 0.408786 | 1.3:-71110287 | MS.gene33573:CDS |
| TGTGATTATCGTGCTTTGTA+TGG | 0.409421 | 1.3:-71110524 | MS.gene33573:CDS |
| ATGCAGGGCGGCGGAGCAAT+TGG | 0.413245 | 1.3:-71113757 | MS.gene33573:intron |
| TCCACAGTCGGGAATCATTT+GGG | 0.420700 | 1.3:+71110426 | None:intergenic |
| ACCATATAAGTACAAACAAA+AGG | 0.420898 | 1.3:+71111204 | None:intergenic |
| ACAATGACGACGCCGATTGC+AGG | 0.423331 | 1.3:-71113633 | MS.gene33573:CDS |
| GAGGATGGAATCTGAAGAGA+GGG | 0.426699 | 1.3:-71110222 | MS.gene33573:CDS |
| CATGTTCTACGGGATCAAAT+TGG | 0.433240 | 1.3:-71113501 | MS.gene33573:CDS |
| TGATGCGGTGAATCAGGAAT+TGG | 0.435489 | 1.3:-71111278 | MS.gene33573:CDS |
| AATATCAACTGAAGTGCATA+AGG | 0.439777 | 1.3:+71111078 | None:intergenic |
| GTCTCTATTCCGCTTCCAAA+TGG | 0.440463 | 1.3:-71113878 | MS.gene33573:intron |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | 1.3:-71111123 | MS.gene33573:CDS |
| TGCAAAGCTGCATTCAGAGT+TGG | 0.452965 | 1.3:-71110288 | MS.gene33573:CDS |
| GTCTTAATGTCAGTAGTCAT+TGG | 0.455741 | 1.3:-71111048 | MS.gene33573:CDS |
| ACCCTTGGAACTGGAATGCC+TGG | 0.456175 | 1.3:-71111114 | MS.gene33573:CDS |
| AGGAATTGGTTTCTTTAGAG+AGG | 0.470455 | 1.3:-71111264 | MS.gene33573:CDS |
| AGGGCATCAAACTGTGATGA+TGG | 0.471291 | 1.3:-71110335 | MS.gene33573:CDS |
| ACTTCGTCCTCCTCCATAAC+CGG | 0.471498 | 1.3:+71113591 | None:intergenic |
| GGGCTTTAGCAATTTGAGCT+TGG | 0.481121 | 1.3:+71110918 | None:intergenic |
| AGCAAAGCCTCAATCATGTT+AGG | 0.482273 | 1.3:+71110194 | None:intergenic |
| TTGTCTACACTCCGCAAGAA+TGG | 0.490832 | 1.3:-71111238 | MS.gene33573:CDS |
| AGAGAGCTGCTCATGTTCTA+CGG | 0.491336 | 1.3:-71113512 | MS.gene33573:CDS |
| GAGCAGCTCTCTTATATTCA+CGG | 0.492543 | 1.3:+71113523 | None:intergenic |
| GAGGAGGACGAAGTTGTTGA+TGG | 0.493850 | 1.3:-71113582 | MS.gene33573:CDS |
| CAGAAAGGATTTAGAGAGGA+TGG | 0.495031 | 1.3:-71110237 | MS.gene33573:CDS |
| CTGCTGTGAATGCCTATCGT+CGG | 0.496961 | 1.3:-71110565 | MS.gene33573:CDS |
| ACACGTCTTCTCGATTATAC+TGG | 0.497476 | 1.3:-71110113 | MS.gene33573:CDS |
| AGAGGATGGAATCTGAAGAG+AGG | 0.500780 | 1.3:-71110223 | MS.gene33573:CDS |
| TCCATGTCTTCCACTCTGTA+AGG | 0.501402 | 1.3:+71110833 | None:intergenic |
| TGCTGTGAATGCCTATCGTC+GGG | 0.506475 | 1.3:-71110564 | MS.gene33573:CDS |
| CTCCAATGTGCTTTATGCTA+AGG | 0.506539 | 1.3:-71110804 | MS.gene33573:CDS |
| AAATTCTTTCAAACTGTACT+GGG | 0.511198 | 1.3:+71110898 | None:intergenic |
| GAAGAGATGATAGAACTTGA+GGG | 0.512391 | 1.3:-71111313 | MS.gene33573:CDS |
| GGAAGAGATGATAGAACTTG+AGG | 0.513786 | 1.3:-71111314 | MS.gene33573:CDS |
| TGTCAGTAGTCATTGGATGA+AGG | 0.516391 | 1.3:-71111041 | MS.gene33573:CDS |
| CGCTACGCCGGTTATGGAGG+AGG | 0.520117 | 1.3:-71113598 | MS.gene33573:CDS |
| ATGATAGAACTTGAGGGTCT+GGG | 0.520445 | 1.3:-71111307 | MS.gene33573:CDS |
| TGGACTAGGACAAGCTTATG+AGG | 0.520816 | 1.3:-71110504 | MS.gene33573:CDS |
| GGGCATCAAACTGTGATGAT+GGG | 0.526275 | 1.3:-71110334 | MS.gene33573:CDS |
| GAGAGCTGCTCATGTTCTAC+GGG | 0.527349 | 1.3:-71113511 | MS.gene33573:CDS |
| TAAGGATTGCAGCTCAGTCC+AGG | 0.528177 | 1.3:+71111096 | None:intergenic |
| TTCGAAGGCGTGAATTTCGA+TGG | 0.532573 | 1.3:+71113714 | None:intergenic |
| AGCCATTGCTATCCACAGTC+GGG | 0.535467 | 1.3:+71110415 | None:intergenic |
| TTTGGCGCGTACAGTTCTTG+TGG | 0.535552 | 1.3:-71111152 | MS.gene33573:CDS |
| CGATAGGCATTCACAGCAGC+GGG | 0.537165 | 1.3:+71110569 | None:intergenic |
| CCATATAAGTACAAACAAAA+GGG | 0.545143 | 1.3:+71111205 | None:intergenic |
| GTCCAGGCATTCCAGTTCCA+AGG | 0.545231 | 1.3:+71111112 | None:intergenic |
| GGAAAGTGCTCAACATCCGC+TGG | 0.547287 | 1.3:+71109912 | None:intergenic |
| GGAATTGGTTTCTTTAGAGA+GGG | 0.550127 | 1.3:-71111263 | MS.gene33573:CDS |
| TATCGTGCTTTGTATGGACT+AGG | 0.552484 | 1.3:-71110518 | MS.gene33573:CDS |
| GATCTATTGTTCCATTCTTG+CGG | 0.552490 | 1.3:+71111227 | None:intergenic |
| TGAAATATACCATTTGGAAG+CGG | 0.554816 | 1.3:+71113869 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | 1.3:-71111129 | MS.gene33573:CDS |
| ACATACGAAACACCTGCAAT+CGG | 0.559093 | 1.3:+71113621 | None:intergenic |
| GGCAGGAGAAAAGCGAAAAG+AGG | 0.563435 | 1.3:-71111335 | MS.gene33573:CDS |
| GCAGAAGCAGATGAGTTCAA+AGG | 0.564871 | 1.3:-71113952 | None:intergenic |
| ATCAGTCATGAATACTCTAT+GGG | 0.566494 | 1.3:+71110754 | None:intergenic |
| ACTCTGAATGCAGCTTTGCA+AGG | 0.569872 | 1.3:+71110291 | None:intergenic |
| GGAATTATTACAGTTTAAAG+GGG | 0.578878 | 1.3:-71110700 | MS.gene33573:CDS |
| GGTCTTATACTGAAACAGAA+AGG | 0.579233 | 1.3:-71111184 | MS.gene33573:CDS |
| TATTTCAACAGCCCGACGAT+AGG | 0.582252 | 1.3:+71110553 | None:intergenic |
| AGAGTTGGGACGCACTGAAG+AGG | 0.583415 | 1.3:-71110273 | MS.gene33573:CDS |
| GAGCCATTGCTATCCACAGT+CGG | 0.589081 | 1.3:+71110414 | None:intergenic |
| TCAAAATATGAATATTTACT+CGG | 0.590894 | 1.3:-71110965 | MS.gene33573:CDS |
| TCCTTACAGAGTGGAAGACA+TGG | 0.592201 | 1.3:-71110834 | MS.gene33573:CDS |
| TTCCTTAGCATAAAGCACAT+TGG | 0.592234 | 1.3:+71110802 | None:intergenic |
| GAGAAGAACTGAAGAAGCAG+AGG | 0.594801 | 1.3:-71110144 | MS.gene33573:CDS |
| AGGCAATAAAGTGTTACAGA+AGG | 0.600848 | 1.3:-71110355 | MS.gene33573:CDS |
| AGGGCGGCGGAGCAATTGGT+AGG | 0.602481 | 1.3:-71113753 | MS.gene33573:CDS |
| TTGATGAAAATGCAGGGCGG+CGG | 0.604789 | 1.3:-71113766 | MS.gene33573:intron |
| GGCAATAAAGTGTTACAGAA+GGG | 0.606652 | 1.3:-71110354 | MS.gene33573:CDS |
| GGAAGGACCTAACATGATTG+AGG | 0.608692 | 1.3:-71110201 | MS.gene33573:CDS |
| TCCAGGCATTCCAGTTCCAA+GGG | 0.610042 | 1.3:+71111113 | None:intergenic |
| GGCATCAAACTGTGATGATG+GGG | 0.611034 | 1.3:-71110333 | MS.gene33573:CDS |
| AAGTGCTCAACATCCGCTGG+AGG | 0.612692 | 1.3:+71109915 | None:intergenic |
| TGTCGCTACGCCGGTTATGG+AGG | 0.615333 | 1.3:-71113601 | MS.gene33573:CDS |
| ACTACAGAAAGGATTTAGAG+AGG | 0.616904 | 1.3:-71110241 | MS.gene33573:CDS |
| ACAATCTAGTTTCCCTCCAG+CGG | 0.619234 | 1.3:-71109928 | MS.gene33573:CDS |
| TTCCCGACTGTGGATAGCAA+TGG | 0.623157 | 1.3:-71110417 | MS.gene33573:CDS |
| TCATGAATACTCTATGGGCA+AGG | 0.627413 | 1.3:+71110759 | None:intergenic |
| AGTGCTCAACATCCGCTGGA+GGG | 0.630408 | 1.3:+71109916 | None:intergenic |
| CGTTGAAACCTCGTATTCGA+AGG | 0.633904 | 1.3:+71113699 | None:intergenic |
| TACAAAGCACGATAATCACA+CGG | 0.635868 | 1.3:+71110527 | None:intergenic |
| CTATATTTGAAGAACTGCTG+AGG | 0.641049 | 1.3:-71110862 | MS.gene33573:CDS |
| AATTCACGCCTTCGAATACG+AGG | 0.641925 | 1.3:-71113707 | MS.gene33573:CDS |
| GTGGAAGTTCAAGTATTCGT+CGG | 0.649300 | 1.3:-71113677 | MS.gene33573:CDS |
| CCAGCTTCGCAAGCTCGATG+AGG | 0.649439 | 1.3:-71110375 | MS.gene33573:CDS |
| ATGGAATCTGAAGAGAGGGA+AGG | 0.651788 | 1.3:-71110218 | MS.gene33573:CDS |
| TGTTTCGTATGTCGCTACGC+CGG | 0.657212 | 1.3:-71113610 | MS.gene33573:CDS |
| GCTGGAGGGAAACTAGATTG+TGG | 0.669682 | 1.3:+71109930 | None:intergenic |
| TTCATCAAAAGACATTATGG+AGG | 0.673231 | 1.3:+71109891 | None:intergenic |
| ACGATAGGCATTCACAGCAG+CGG | 0.679646 | 1.3:+71110568 | None:intergenic |
| TCGGAAGTATCGTACTCATG+AGG | 0.682359 | 1.3:-71113658 | MS.gene33573:CDS |
| GAGGATTGATCCTTACAGAG+TGG | 0.688847 | 1.3:-71110843 | MS.gene33573:CDS |
| ACCCAAATGATTCCCGACTG+TGG | 0.691891 | 1.3:-71110427 | MS.gene33573:CDS |
| ACAAAGCACGATAATCACAC+GGG | 0.717331 | 1.3:+71110528 | None:intergenic |
| GGGTCTGGGTAAAAGTGATG+CGG | 0.758419 | 1.3:-71111293 | MS.gene33573:CDS |
| TCGAATACGAGGTTTCAACG+TGG | 0.774191 | 1.3:-71113696 | MS.gene33573:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTGATTATTAAATGATT+TGG | + | chr1.3:71113844-71113863 | None:intergenic | 15.0% |
| !! | TACTAATAAACTATAATTAC+TGG | - | chr1.3:71111074-71111093 | MS.gene33573:CDS | 15.0% |
| !! | TCAAAATATGAATATTTACT+CGG | - | chr1.3:71112882-71112901 | MS.gene33573:intron | 15.0% |
| !! | TTTCAAAAATAACTAAAAAG+CGG | + | chr1.3:71112003-71112022 | None:intergenic | 15.0% |
| !!! | CTATTAACATTTTGTTTAAA+AGG | - | chr1.3:71111730-71111749 | MS.gene33573:intron | 15.0% |
| !!! | CTTTTAAACAAAATGTTAAT+AGG | + | chr1.3:71111732-71111751 | None:intergenic | 15.0% |
| !!! | TATTAGAAATACCAATTTTA+AGG | + | chr1.3:71111702-71111721 | None:intergenic | 15.0% |
| !!! | TCAGATTTAATTTTAAAAGA+TGG | + | chr1.3:71111570-71111589 | None:intergenic | 15.0% |
| !! | AAACGTTACTTGATATATTT+AGG | - | chr1.3:71111034-71111053 | MS.gene33573:CDS | 20.0% |
| !! | AAGGAATAGATATTTAGATT+AGG | + | chr1.3:71110017-71110036 | None:intergenic | 20.0% |
| !! | AGGAATAGATATTTAGATTA+GGG | + | chr1.3:71110016-71110035 | None:intergenic | 20.0% |
| !! | CTAAATGAAGATAATACATT+GGG | - | chr1.3:71112330-71112349 | MS.gene33573:intron | 20.0% |
| !! | TCAAATCAAATAAAAGAGAA+TGG | + | chr1.3:71111376-71111395 | None:intergenic | 20.0% |
| !! | TCTAAATGAAGATAATACAT+TGG | - | chr1.3:71112329-71112348 | MS.gene33573:intron | 20.0% |
| !!! | AGAAAAAAATCTTTTCGAAA+AGG | + | chr1.3:71112208-71112227 | None:intergenic | 20.0% |
| !!! | ATAATTTTTGTCCAGTTTAA+GGG | + | chr1.3:71113207-71113226 | None:intergenic | 20.0% |
| !!! | GAAAAAAATCTTTTCGAAAA+GGG | + | chr1.3:71112207-71112226 | None:intergenic | 20.0% |
| !!! | GTTAAATATTTTTTACTCAC+AGG | + | chr1.3:71113761-71113780 | None:intergenic | 20.0% |
| !!! | TACTTTCCAAGTTTTATTTA+CGG | + | chr1.3:71111869-71111888 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTGATTTGAGTT+GGG | - | chr1.3:71111379-71111398 | MS.gene33573:intron | 20.0% |
| !!! | TTTGCATTTTCTGTTTATAT+GGG | - | chr1.3:71110696-71110715 | MS.gene33573:CDS | 20.0% |
| !!! | TTTTATAATGTCAAATGCAT+TGG | - | chr1.3:71110626-71110645 | MS.gene33573:CDS | 20.0% |
| ! | AAAGCATATGTTGTCAATAA+TGG | + | chr1.3:71111240-71111259 | None:intergenic | 25.0% |
| ! | AAATTCTTTCAAACTGTACT+GGG | + | chr1.3:71112952-71112971 | None:intergenic | 25.0% |
| ! | AATTCCTATAATTGTTGAAG+TGG | - | chr1.3:71111289-71111308 | MS.gene33573:CDS | 25.0% |
| ! | ACCATATAAGTACAAACAAA+AGG | + | chr1.3:71112646-71112665 | None:intergenic | 25.0% |
| ! | ACTTTGATGTAGTAGTATTA+TGG | - | chr1.3:71110669-71110688 | MS.gene33573:CDS | 25.0% |
| ! | ATTCCTATAATTGTTGAAGT+GGG | - | chr1.3:71111290-71111309 | MS.gene33573:CDS | 25.0% |
| ! | CCATATAAGTACAAACAAAA+GGG | + | chr1.3:71112645-71112664 | None:intergenic | 25.0% |
| ! | GGAATTATTACAGTTTAAAG+GGG | - | chr1.3:71113147-71113166 | MS.gene33573:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+GGG | - | chr1.3:71113146-71113165 | MS.gene33573:intron | 25.0% |
| ! | GTAAATAAAACTTGGAAAGT+AGG | - | chr1.3:71111868-71111887 | MS.gene33573:intron | 25.0% |
| ! | TACGTTATAAACGAAATTGT+TGG | - | chr1.3:71110592-71110611 | MS.gene33573:CDS | 25.0% |
| ! | TGGGAATTATTACAGTTTAA+AGG | - | chr1.3:71113145-71113164 | MS.gene33573:intron | 25.0% |
| ! | TTAACTCCTTAAATAGATCT+CGG | - | chr1.3:71110547-71110566 | MS.gene33573:CDS | 25.0% |
| !! | ATTTTGTTGAGTTCCATTTT+GGG | - | chr1.3:71110928-71110947 | MS.gene33573:CDS | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | - | chr1.3:71113126-71113145 | MS.gene33573:intron | 25.0% |
| !! | GAAGTTTGAAATATACCATT+TGG | + | chr1.3:71109987-71110006 | None:intergenic | 25.0% |
| !! | GATAATTTTTGTCCAGTTTA+AGG | + | chr1.3:71113208-71113227 | None:intergenic | 25.0% |
| !! | GTGTTTACTTCAATTTTTGT+GGG | - | chr1.3:71110839-71110858 | MS.gene33573:CDS | 25.0% |
| !! | GTTTGCATTTTCTGTTTATA+TGG | - | chr1.3:71110695-71110714 | MS.gene33573:CDS | 25.0% |
| !! | TATATTCAAGTTAAAGCATG+AGG | - | chr1.3:71111977-71111996 | MS.gene33573:intron | 25.0% |
| !! | TGTGTTTACTTCAATTTTTG+TGG | - | chr1.3:71110838-71110857 | MS.gene33573:CDS | 25.0% |
| !!! | ATTTGAATTTGATTTCTAGC+TGG | - | chr1.3:71110494-71110513 | MS.gene33573:CDS | 25.0% |
| !!! | CTCTTTTATTTGATTTGAGT+TGG | - | chr1.3:71111378-71111397 | MS.gene33573:intron | 25.0% |
| !!! | GAAACTATTTTTACCAACAT+TGG | - | chr1.3:71110450-71110469 | MS.gene33573:CDS | 25.0% |
| !!! | TATGACCTTCTTTAATTTGA+AGG | + | chr1.3:71111546-71111565 | None:intergenic | 25.0% |
| !!! | TGATGGTGATTTTTATCTTT+TGG | - | chr1.3:71110282-71110301 | MS.gene33573:CDS | 25.0% |
| AATATCAACTGAAGTGCATA+AGG | + | chr1.3:71112772-71112791 | None:intergenic | 30.0% | |
| ACAAAAATTATCTCTCTGCT+TGG | - | chr1.3:71113216-71113235 | MS.gene33573:intron | 30.0% | |
| ACAATGTACTAATCCAATGT+TGG | + | chr1.3:71110466-71110485 | None:intergenic | 30.0% | |
| ACAGAAAGGCAATGATAATT+TGG | - | chr1.3:71112677-71112696 | MS.gene33573:intron | 30.0% | |
| AGAAAACGTGAGAAGTTAAA+TGG | + | chr1.3:71112300-71112319 | None:intergenic | 30.0% | |
| ATAATCAAAGTCATGCTTTC+AGG | - | chr1.3:71113853-71113872 | MS.gene33573:intron | 30.0% | |
| ATATTACACACACAACTTCA+TGG | + | chr1.3:71111767-71111786 | None:intergenic | 30.0% | |
| ATCAGTCATGAATACTCTAT+GGG | + | chr1.3:71113096-71113115 | None:intergenic | 30.0% | |
| CAAATTCTTTCAAACTGTAC+TGG | + | chr1.3:71112953-71112972 | None:intergenic | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | + | chr1.3:71113128-71113147 | None:intergenic | 30.0% | |
| TAACTCCTTAAATAGATCTC+GGG | - | chr1.3:71110548-71110567 | MS.gene33573:CDS | 30.0% | |
| TATCAGTCATGAATACTCTA+TGG | + | chr1.3:71113097-71113116 | None:intergenic | 30.0% | |
| TCTTAAAAACATTCTGCTTC+AGG | + | chr1.3:71111940-71111959 | None:intergenic | 30.0% | |
| TGAAATATACCATTTGGAAG+CGG | + | chr1.3:71109981-71110000 | None:intergenic | 30.0% | |
| TGGAAAAACATATGTTGTGA+GGG | - | chr1.3:71110523-71110542 | MS.gene33573:CDS | 30.0% | |
| TGGAGTTCTTATGTTTATTG+TGG | - | chr1.3:71110646-71110665 | MS.gene33573:CDS | 30.0% | |
| TTAAATCTGATTAGTGCTGT+TGG | - | chr1.3:71111580-71111599 | MS.gene33573:intron | 30.0% | |
| TTCCTATAATTGTTGAAGTG+GGG | - | chr1.3:71111291-71111310 | MS.gene33573:CDS | 30.0% | |
| TTGACAAAACTAACCATAAG+AGG | + | chr1.3:71112232-71112251 | None:intergenic | 30.0% | |
| TTGGAAAAACATATGTTGTG+AGG | - | chr1.3:71110522-71110541 | MS.gene33573:CDS | 30.0% | |
| ! | CCTGAATCTTGTTGTATTAT+TGG | - | chr1.3:71113125-71113144 | MS.gene33573:intron | 30.0% |
| ! | GAATATTTACTCGGAACTTT+TGG | - | chr1.3:71112891-71112910 | MS.gene33573:intron | 30.0% |
| ! | GATTTTGTTGAGTTCCATTT+TGG | - | chr1.3:71110927-71110946 | MS.gene33573:CDS | 30.0% |
| ! | TTCGTATTGATGAAAATGCA+GGG | - | chr1.3:71110075-71110094 | MS.gene33573:intron | 30.0% |
| ! | TTTCGTATTGATGAAAATGC+AGG | - | chr1.3:71110074-71110093 | MS.gene33573:intron | 30.0% |
| ! | TTTTGTTGAGTTCCATTTTG+GGG | - | chr1.3:71110929-71110948 | MS.gene33573:CDS | 30.0% |
| !! | AACATTGGATTAGTACATTG+TGG | - | chr1.3:71110465-71110484 | MS.gene33573:CDS | 30.0% |
| !! | AGATGATTTTGTGAAGGTAT+AGG | - | chr1.3:71110789-71110808 | MS.gene33573:CDS | 30.0% |
| !! | CATTATGCATCCTTAGTTTT+TGG | + | chr1.3:71112854-71112873 | None:intergenic | 30.0% |
| !! | CCCTTTTGTTTGTACTTATA+TGG | - | chr1.3:71112642-71112661 | MS.gene33573:intron | 30.0% |
| !! | GAAATTACTGAGTTTGCTAT+TGG | + | chr1.3:71112093-71112112 | None:intergenic | 30.0% |
| !!! | AGATTTTTTTCTGCCTCTTA+TGG | - | chr1.3:71112216-71112235 | MS.gene33573:intron | 30.0% |
| !!! | CCAGAGTTTTAACTTTTACT+GGG | + | chr1.3:71111668-71111687 | None:intergenic | 30.0% |
| !!! | TGAAAGAACCGAGTTTTTTT+GGG | - | chr1.3:71112436-71112455 | MS.gene33573:intron | 30.0% |
| !!! | TTGAAAGAACCGAGTTTTTT+TGG | - | chr1.3:71112435-71112454 | MS.gene33573:intron | 30.0% |
| AAATGAAACGTCGTCGTTTA+AGG | + | chr1.3:71110057-71110076 | None:intergenic | 35.0% | |
| AACCCCACTTCAACAATTAT+AGG | + | chr1.3:71111296-71111315 | None:intergenic | 35.0% | |
| AAGATCTTATGCTCTCTATC+TGG | - | chr1.3:71110387-71110406 | MS.gene33573:CDS | 35.0% | |
| AAGTAATGAAGCGCGTATAA+AGG | + | chr1.3:71113380-71113399 | None:intergenic | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | - | chr1.3:71112718-71112737 | MS.gene33573:intron | 35.0% | |
| ACATCTTAGACTTGACATGA+GGG | + | chr1.3:71111463-71111482 | None:intergenic | 35.0% | |
| ACTACAGAAAGGATTTAGAG+AGG | - | chr1.3:71113606-71113625 | MS.gene33573:CDS | 35.0% | |
| CCCAGTAAAAGTTAAAACTC+TGG | - | chr1.3:71111665-71111684 | MS.gene33573:intron | 35.0% | |
| CGTCTTCCGTAAATAAAACT+TGG | - | chr1.3:71111860-71111879 | MS.gene33573:intron | 35.0% | |
| CTAATAGCACAAACAACTCA+TGG | - | chr1.3:71112365-71112384 | MS.gene33573:intron | 35.0% | |
| CTAATCCCGAGATCTATTTA+AGG | + | chr1.3:71110556-71110575 | None:intergenic | 35.0% | |
| CTATATTTGAAGAACTGCTG+AGG | - | chr1.3:71112985-71113004 | MS.gene33573:intron | 35.0% | |
| GAAGAGATGATAGAACTTGA+GGG | - | chr1.3:71112534-71112553 | MS.gene33573:intron | 35.0% | |
| GACATGACTAATAGCATAAG+AGG | + | chr1.3:71112269-71112288 | None:intergenic | 35.0% | |
| GATCTATTGTTCCATTCTTG+CGG | + | chr1.3:71112623-71112642 | None:intergenic | 35.0% | |
| GTAAAAGTTAAAACTCTGGC+TGG | - | chr1.3:71111669-71111688 | MS.gene33573:intron | 35.0% | |
| GTCTTAATGTCAGTAGTCAT+TGG | - | chr1.3:71112799-71112818 | MS.gene33573:intron | 35.0% | |
| TACAAAGCACGATAATCACA+CGG | + | chr1.3:71113323-71113342 | None:intergenic | 35.0% | |
| TCCAAAACCCCAAAAAAACT+CGG | + | chr1.3:71112447-71112466 | None:intergenic | 35.0% | |
| TGCTGCCTTCAAATTAAAGA+AGG | - | chr1.3:71111538-71111557 | MS.gene33573:intron | 35.0% | |
| TGTGATTATCGTGCTTTGTA+TGG | - | chr1.3:71113323-71113342 | MS.gene33573:intron | 35.0% | |
| TTCCTTAGCATAAAGCACAT+TGG | + | chr1.3:71113048-71113067 | None:intergenic | 35.0% | |
| ! | AGGAATTGGTTTCTTTAGAG+AGG | - | chr1.3:71112583-71112602 | MS.gene33573:intron | 35.0% |
| ! | AGGCAATAAAGTGTTACAGA+AGG | - | chr1.3:71113492-71113511 | MS.gene33573:CDS | 35.0% |
| ! | GGAATTGGTTTCTTTAGAGA+GGG | - | chr1.3:71112584-71112603 | MS.gene33573:intron | 35.0% |
| ! | GGCAATAAAGTGTTACAGAA+GGG | - | chr1.3:71113493-71113512 | MS.gene33573:CDS | 35.0% |
| ! | GGTCTTATACTGAAACAGAA+AGG | - | chr1.3:71112663-71112682 | MS.gene33573:intron | 35.0% |
| ! | TATGCTAAGGAATGCTTTTC+TGG | - | chr1.3:71113056-71113075 | MS.gene33573:intron | 35.0% |
| ! | TTTGTGGGAAAGTCTGTTTT+GGG | - | chr1.3:71110854-71110873 | MS.gene33573:CDS | 35.0% |
| ! | TTTGTTGAGTTCCATTTTGG+GGG | - | chr1.3:71110930-71110949 | MS.gene33573:CDS | 35.0% |
| ! | TTTTGTGGGAAAGTCTGTTT+TGG | - | chr1.3:71110853-71110872 | MS.gene33573:CDS | 35.0% |
| !! | ATTTGCTATGTTGTCAGTTC+AGG | - | chr1.3:71110956-71110975 | MS.gene33573:CDS | 35.0% |
| !! | TGGATTAGTACATTGTGGTT+AGG | - | chr1.3:71110470-71110489 | MS.gene33573:CDS | 35.0% |
| !! | TTTTAAGAGAGCCCTTAAAC+TGG | - | chr1.3:71113193-71113212 | MS.gene33573:intron | 35.0% |
| !!! | GAAAGAACCGAGTTTTTTTG+GGG | - | chr1.3:71112437-71112456 | MS.gene33573:intron | 35.0% |
| !!! | GCCAGAGTTTTAACTTTTAC+TGG | + | chr1.3:71111669-71111688 | None:intergenic | 35.0% |
| AAAACTTGGAAAGTAGGCAC+AGG | - | chr1.3:71111874-71111893 | MS.gene33573:intron | 40.0% | |
| AAAGTCATGCTTTCAGGAGA+GGG | - | chr1.3:71113859-71113878 | MS.gene33573:intron | 40.0% | |
| AACGTCGTCGTTTAAGGAAT+AGG | + | chr1.3:71110051-71110070 | None:intergenic | 40.0% | |
| AATCGCAAAAAGCTCAACTC+TGG | - | chr1.3:71111142-71111161 | MS.gene33573:CDS | 40.0% | |
| ACAAAGCACGATAATCACAC+GGG | + | chr1.3:71113322-71113341 | None:intergenic | 40.0% | |
| ACACGTCTTCTCGATTATAC+TGG | - | chr1.3:71113734-71113753 | MS.gene33573:CDS | 40.0% | |
| ACATACGAAACACCTGCAAT+CGG | + | chr1.3:71110229-71110248 | None:intergenic | 40.0% | |
| ACATTAGGCCAGAACATAGA+AGG | - | chr1.3:71111340-71111359 | MS.gene33573:intron | 40.0% | |
| ACGTCGTCGTTTAAGGAATA+GGG | + | chr1.3:71110050-71110069 | None:intergenic | 40.0% | |
| ACTGACATGTCATCTCTTCA+TGG | - | chr1.3:71111435-71111454 | MS.gene33573:intron | 40.0% | |
| ACTGAGCATGTAGCAACATT+AGG | - | chr1.3:71111325-71111344 | MS.gene33573:CDS | 40.0% | |
| AGCAAAGCCTCAATCATGTT+AGG | + | chr1.3:71113656-71113675 | None:intergenic | 40.0% | |
| ATAGACTGCCTTCTATGTTC+TGG | + | chr1.3:71111351-71111370 | None:intergenic | 40.0% | |
| ATCGCAAAAAGCTCAACTCT+GGG | - | chr1.3:71111143-71111162 | MS.gene33573:CDS | 40.0% | |
| ATGATAGAACTTGAGGGTCT+GGG | - | chr1.3:71112540-71112559 | MS.gene33573:intron | 40.0% | |
| CACATCTTAGACTTGACATG+AGG | + | chr1.3:71111464-71111483 | None:intergenic | 40.0% | |
| CAGAAAGGATTTAGAGAGGA+TGG | - | chr1.3:71113610-71113629 | MS.gene33573:CDS | 40.0% | |
| CATGTTCTACGGGATCAAAT+TGG | - | chr1.3:71110346-71110365 | MS.gene33573:CDS | 40.0% | |
| CCAGTCTCTACCAAAAACTA+AGG | - | chr1.3:71112841-71112860 | MS.gene33573:intron | 40.0% | |
| CTCCAATGTGCTTTATGCTA+AGG | - | chr1.3:71113043-71113062 | MS.gene33573:intron | 40.0% | |
| GAGCAGCTCTCTTATATTCA+CGG | + | chr1.3:71110327-71110346 | None:intergenic | 40.0% | |
| GGAAGAGATGATAGAACTTG+AGG | - | chr1.3:71112533-71112552 | MS.gene33573:intron | 40.0% | |
| GGAATAGGGAAAATGAGAGA+AGG | + | chr1.3:71110036-71110055 | None:intergenic | 40.0% | |
| GTGGAAGTTCAAGTATTCGT+CGG | - | chr1.3:71110170-71110189 | MS.gene33573:CDS | 40.0% | |
| TAAAAGTGATGCGGTGAATC+AGG | - | chr1.3:71112563-71112582 | MS.gene33573:intron | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | - | chr1.3:71112724-71112743 | MS.gene33573:intron | 40.0% | |
| TACAATGAACAAAGCACACC+AGG | - | chr1.3:71111410-71111429 | MS.gene33573:intron | 40.0% | |
| TAGCAAATATCCCCCCAAAA+TGG | + | chr1.3:71110944-71110963 | None:intergenic | 40.0% | |
| TATCGTGCTTTGTATGGACT+AGG | - | chr1.3:71113329-71113348 | MS.gene33573:intron | 40.0% | |
| TCATGAATACTCTATGGGCA+AGG | + | chr1.3:71113091-71113110 | None:intergenic | 40.0% | |
| TGTCAGTAGTCATTGGATGA+AGG | - | chr1.3:71112806-71112825 | MS.gene33573:intron | 40.0% | |
| ! | ACGACGAGATGATTTTGTGA+AGG | - | chr1.3:71110783-71110802 | MS.gene33573:CDS | 40.0% |
| ! | AGTGCTGTTGGAAAGTAAGT+TGG | - | chr1.3:71111592-71111611 | MS.gene33573:intron | 40.0% |
| ! | CTGTTACACAAACTGACTTC+AGG | - | chr1.3:71112147-71112166 | MS.gene33573:intron | 40.0% |
| ! | GGCAGCATTTTACTACAGAA+AGG | - | chr1.3:71113595-71113614 | MS.gene33573:CDS | 40.0% |
| ! | GGTGTGTATGTTGTGTTGAT+GGG | - | chr1.3:71110717-71110736 | MS.gene33573:CDS | 40.0% |
| ! | GTATTGATGAAAATGCAGGG+CGG | - | chr1.3:71110078-71110097 | MS.gene33573:intron | 40.0% |
| ! | TTGTTGAGTTCCATTTTGGG+GGG | - | chr1.3:71110931-71110950 | MS.gene33573:CDS | 40.0% |
| !! | ATTTGATTTGAGTTGGGTGC+AGG | - | chr1.3:71111385-71111404 | MS.gene33573:intron | 40.0% |
| !! | TGATTTCTAGCTGGTTCGTT+TGG | - | chr1.3:71110503-71110522 | MS.gene33573:CDS | 40.0% |
| !! | TTTGATTTGAGTTGGGTGCA+GGG | - | chr1.3:71111386-71111405 | MS.gene33573:intron | 40.0% |
| !!! | ACCGAGTTTTTTTGGGGTTT+TGG | - | chr1.3:71112443-71112462 | MS.gene33573:intron | 40.0% |
| !!! | CCTTAGTTTTTGGTAGAGAC+TGG | + | chr1.3:71112844-71112863 | None:intergenic | 40.0% |
| AATTCACGCCTTCGAATACG+AGG | - | chr1.3:71110140-71110159 | MS.gene33573:CDS | 45.0% | |
| ACTCTGAATGCAGCTTTGCA+AGG | + | chr1.3:71113559-71113578 | None:intergenic | 45.0% | |
| AGAGAGCTGCTCATGTTCTA+CGG | - | chr1.3:71110335-71110354 | MS.gene33573:CDS | 45.0% | |
| AGAGGATGGAATCTGAAGAG+AGG | - | chr1.3:71113624-71113643 | MS.gene33573:CDS | 45.0% | |
| AGCATAAGAGGCAGAAGACT+AGG | + | chr1.3:71112257-71112276 | None:intergenic | 45.0% | |
| ATCCACAGTCGGGAATCATT+TGG | + | chr1.3:71113425-71113444 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+AGG | - | chr1.3:71113629-71113648 | MS.gene33573:CDS | 45.0% | |
| CAAAGTCATGCTTTCAGGAG+AGG | - | chr1.3:71113858-71113877 | MS.gene33573:intron | 45.0% | |
| CGTTGAAACCTCGTATTCGA+AGG | + | chr1.3:71110151-71110170 | None:intergenic | 45.0% | |
| CTCTCTGCTTGGACACTTAT+GGG | - | chr1.3:71113227-71113246 | MS.gene33573:intron | 45.0% | |
| GAGAAGAACTGAAGAAGCAG+AGG | - | chr1.3:71113703-71113722 | MS.gene33573:CDS | 45.0% | |
| GAGGATGGAATCTGAAGAGA+GGG | - | chr1.3:71113625-71113644 | MS.gene33573:CDS | 45.0% | |
| GAGGATTGATCCTTACAGAG+TGG | - | chr1.3:71113004-71113023 | MS.gene33573:intron | 45.0% | |
| GATGATAGAACTTGAGGGTC+TGG | - | chr1.3:71112539-71112558 | MS.gene33573:intron | 45.0% | |
| GCAAAGCTGCATTCAGAGTT+GGG | - | chr1.3:71113560-71113579 | MS.gene33573:CDS | 45.0% | |
| GCATAAGAGGCAGAAGACTA+GGG | + | chr1.3:71112256-71112275 | None:intergenic | 45.0% | |
| GGAAGGACCTAACATGATTG+AGG | - | chr1.3:71113646-71113665 | MS.gene33573:CDS | 45.0% | |
| GGGCATCAAACTGTGATGAT+GGG | - | chr1.3:71113513-71113532 | MS.gene33573:CDS | 45.0% | |
| GGGTGTGTATGTTGTGTTGA+TGG | - | chr1.3:71110716-71110735 | MS.gene33573:CDS | 45.0% | |
| GTCAGTTCAGGATAGCACAA+CGG | - | chr1.3:71110968-71110987 | MS.gene33573:CDS | 45.0% | |
| GTCTCTATTCCGCTTCCAAA+TGG | - | chr1.3:71109969-71109988 | MS.gene33573:CDS | 45.0% | |
| GTTGAGCACTTTCCTCCATA+AGG | - | chr1.3:71113944-71113963 | MS.gene33573:CDS | 45.0% | |
| TATTTCAACAGCCCGACGAT+AGG | + | chr1.3:71113297-71113316 | None:intergenic | 45.0% | |
| TCCACAGTCGGGAATCATTT+GGG | + | chr1.3:71113424-71113443 | None:intergenic | 45.0% | |
| TCCATGTCTTCCACTCTGTA+AGG | + | chr1.3:71113017-71113036 | None:intergenic | 45.0% | |
| TCCTTACAGAGTGGAAGACA+TGG | - | chr1.3:71113013-71113032 | MS.gene33573:intron | 45.0% | |
| TCGAATACGAGGTTTCAACG+TGG | - | chr1.3:71110151-71110170 | MS.gene33573:CDS | 45.0% | |
| TCTCTCTGCTTGGACACTTA+TGG | - | chr1.3:71113226-71113245 | MS.gene33573:intron | 45.0% | |
| TGATGCGGTGAATCAGGAAT+TGG | - | chr1.3:71112569-71112588 | MS.gene33573:intron | 45.0% | |
| TGCAAAGCTGCATTCAGAGT+TGG | - | chr1.3:71113559-71113578 | MS.gene33573:CDS | 45.0% | |
| TTGTCTACACTCCGCAAGAA+TGG | - | chr1.3:71112609-71112628 | MS.gene33573:intron | 45.0% | |
| ! | ACAATCTAGTTTCCCTCCAG+CGG | - | chr1.3:71113919-71113938 | MS.gene33573:CDS | 45.0% |
| ! | AGGGCATCAAACTGTGATGA+TGG | - | chr1.3:71113512-71113531 | MS.gene33573:CDS | 45.0% |
| ! | CCTGCAGTCATCTCAGTTTT+GGG | + | chr1.3:71111004-71111023 | None:intergenic | 45.0% |
| ! | CTGCAGTCATCTCAGTTTTG+GGG | + | chr1.3:71111003-71111022 | None:intergenic | 45.0% |
| ! | GGCATCAAACTGTGATGATG+GGG | - | chr1.3:71113514-71113533 | MS.gene33573:CDS | 45.0% |
| ! | GGGCTTTAGCAATTTGAGCT+TGG | + | chr1.3:71112932-71112951 | None:intergenic | 45.0% |
| ! | TCCTGCAGTCATCTCAGTTT+TGG | + | chr1.3:71111005-71111024 | None:intergenic | 45.0% |
| ! | TGGACTAGGACAAGCTTATG+AGG | - | chr1.3:71113343-71113362 | MS.gene33573:intron | 45.0% |
| ! | TTAAAACTCTGGCTGGCTGT+TGG | - | chr1.3:71111676-71111695 | MS.gene33573:intron | 45.0% |
| ! | TTCGAAGGCGTGAATTTCGA+TGG | + | chr1.3:71110136-71110155 | None:intergenic | 45.0% |
| !! | CTGGCTGTTGGCCTTAAAAT+TGG | - | chr1.3:71111688-71111707 | MS.gene33573:intron | 45.0% |
| !! | TCGGAAGTATCGTACTCATG+AGG | - | chr1.3:71110189-71110208 | MS.gene33573:CDS | 45.0% |
| !! | TGGGAAAGTCTGTTTTGGGT+TGG | - | chr1.3:71110858-71110877 | MS.gene33573:CDS | 45.0% |
| !!! | GAAAGTCTGTTTTGGGTTGG+GGG | - | chr1.3:71110861-71110880 | MS.gene33573:CDS | 45.0% |
| !!! | GGAAAGTCTGTTTTGGGTTG+GGG | - | chr1.3:71110860-71110879 | MS.gene33573:CDS | 45.0% |
| !!! | GGGAAAGTCTGTTTTGGGTT+GGG | - | chr1.3:71110859-71110878 | MS.gene33573:CDS | 45.0% |
| ACCCAAATGATTCCCGACTG+TGG | - | chr1.3:71113420-71113439 | MS.gene33573:intron | 50.0% | |
| ACGACGAACTTCCGTGTTAG+CGG | - | chr1.3:71111204-71111223 | MS.gene33573:CDS | 50.0% | |
| ACGATAGGCATTCACAGCAG+CGG | + | chr1.3:71113282-71113301 | None:intergenic | 50.0% | |
| ACTTCGTCCTCCTCCATAAC+CGG | + | chr1.3:71110259-71110278 | None:intergenic | 50.0% | |
| AGCCATTGCTATCCACAGTC+GGG | + | chr1.3:71113435-71113454 | None:intergenic | 50.0% | |
| CCCAAAACTGAGATGACTGC+AGG | - | chr1.3:71111001-71111020 | MS.gene33573:CDS | 50.0% | |
| CTGCTGTGAATGCCTATCGT+CGG | - | chr1.3:71113282-71113301 | MS.gene33573:intron | 50.0% | |
| GAGAGCTGCTCATGTTCTAC+GGG | - | chr1.3:71110336-71110355 | MS.gene33573:CDS | 50.0% | |
| GAGATGACATGTCAGTCACC+TGG | + | chr1.3:71111431-71111450 | None:intergenic | 50.0% | |
| GAGCCATTGCTATCCACAGT+CGG | + | chr1.3:71113436-71113455 | None:intergenic | 50.0% | |
| GAGGAGGACGAAGTTGTTGA+TGG | - | chr1.3:71110265-71110284 | MS.gene33573:CDS | 50.0% | |
| GCTGGAGGGAAACTAGATTG+TGG | + | chr1.3:71113920-71113939 | None:intergenic | 50.0% | |
| GGCAGGAGAAAAGCGAAAAG+AGG | - | chr1.3:71112512-71112531 | MS.gene33573:intron | 50.0% | |
| GGGTCTGGGTAAAAGTGATG+CGG | - | chr1.3:71112554-71112573 | MS.gene33573:intron | 50.0% | |
| TAAGGATTGCAGCTCAGTCC+AGG | + | chr1.3:71112754-71112773 | None:intergenic | 50.0% | |
| TCCAGGCATTCCAGTTCCAA+GGG | + | chr1.3:71112737-71112756 | None:intergenic | 50.0% | |
| TGCTGTGAATGCCTATCGTC+GGG | - | chr1.3:71113283-71113302 | MS.gene33573:intron | 50.0% | |
| TGTTTCGTATGTCGCTACGC+CGG | - | chr1.3:71110237-71110256 | MS.gene33573:CDS | 50.0% | |
| TTCCCGACTGTGGATAGCAA+TGG | - | chr1.3:71113430-71113449 | MS.gene33573:intron | 50.0% | |
| TTGATGAAAATGCAGGGCGG+CGG | - | chr1.3:71110081-71110100 | MS.gene33573:intron | 50.0% | |
| TTTGGCGCGTACAGTTCTTG+TGG | - | chr1.3:71112695-71112714 | MS.gene33573:intron | 50.0% | |
| !! | AGCTCAACTCTGGGATGCTA+TGG | - | chr1.3:71111152-71111171 | MS.gene33573:CDS | 50.0% |
| !! | TTCGCTTTTCTCCTGCCTGT+AGG | + | chr1.3:71112509-71112528 | None:intergenic | 50.0% |
| AAGTGCTCAACATCCGCTGG+AGG | + | chr1.3:71113935-71113954 | None:intergenic | 55.0% | |
| ACCCTTGGAACTGGAATGCC+TGG | - | chr1.3:71112733-71112752 | MS.gene33573:intron | 55.0% | |
| AGAGTTGGGACGCACTGAAG+AGG | - | chr1.3:71113574-71113593 | MS.gene33573:CDS | 55.0% | |
| AGTGCTCAACATCCGCTGGA+GGG | + | chr1.3:71113934-71113953 | None:intergenic | 55.0% | |
| CACGGAAGTTCGTCGTGTCA+CGG | + | chr1.3:71111200-71111219 | None:intergenic | 55.0% | |
| CCATGCTCTGCACTTCCTAC+AGG | - | chr1.3:71112491-71112510 | MS.gene33573:intron | 55.0% | |
| CGATAGGCATTCACAGCAGC+GGG | + | chr1.3:71113281-71113300 | None:intergenic | 55.0% | |
| GAAGTTCGTCGTGTCACGGT+GGG | + | chr1.3:71111196-71111215 | None:intergenic | 55.0% | |
| GCCAGTTAGCACCGCTAACA+CGG | + | chr1.3:71111218-71111237 | None:intergenic | 55.0% | |
| GTCCAGGCATTCCAGTTCCA+AGG | + | chr1.3:71112738-71112757 | None:intergenic | 55.0% | |
| ! | ACAATGACGACGCCGATTGC+AGG | - | chr1.3:71110214-71110233 | MS.gene33573:CDS | 55.0% |
| ! | CCTGTAGGAAGTGCAGAGCA+TGG | + | chr1.3:71112494-71112513 | None:intergenic | 55.0% |
| ! | GTATGTCGCTACGCCGGTTA+TGG | - | chr1.3:71110243-71110262 | MS.gene33573:CDS | 55.0% |
| ! | TCCGTGTTAGCGGTGCTAAC+TGG | - | chr1.3:71111214-71111233 | MS.gene33573:CDS | 55.0% |
| !! | GGAAAGTGCTCAACATCCGC+TGG | + | chr1.3:71113938-71113957 | None:intergenic | 55.0% |
| CCAGCTTCGCAAGCTCGATG+AGG | - | chr1.3:71113472-71113491 | MS.gene33573:CDS | 60.0% | |
| CCTCATCGAGCTTGCGAAGC+TGG | + | chr1.3:71113475-71113494 | None:intergenic | 60.0% | |
| CTGGGATGCTATGGCGTGTG+TGG | - | chr1.3:71111161-71111180 | MS.gene33573:CDS | 60.0% | |
| GCTCTGCACTTCCTACAGGC+AGG | - | chr1.3:71112495-71112514 | MS.gene33573:intron | 60.0% | |
| GGAAGTTCGTCGTGTCACGG+TGG | + | chr1.3:71111197-71111216 | None:intergenic | 60.0% | |
| GGATGCTATGGCGTGTGTGG+AGG | - | chr1.3:71111164-71111183 | MS.gene33573:CDS | 60.0% | |
| ! | TGTCGCTACGCCGGTTATGG+AGG | - | chr1.3:71110246-71110265 | MS.gene33573:CDS | 60.0% |
| AGGGCGGCGGAGCAATTGGT+AGG | - | chr1.3:71110094-71110113 | MS.gene33573:intron | 65.0% | |
| ATGCAGGGCGGCGGAGCAAT+TGG | - | chr1.3:71110090-71110109 | MS.gene33573:intron | 65.0% | |
| ! | CGCTACGCCGGTTATGGAGG+AGG | - | chr1.3:71110249-71110268 | MS.gene33573:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 71109905 | 71113964 | 71109905 | ID=MS.gene33573 |
| chr1.3 | mRNA | 71109905 | 71113964 | 71109905 | ID=MS.gene33573.t1;Parent=MS.gene33573 |
| chr1.3 | exon | 71113879 | 71113964 | 71113879 | ID=MS.gene33573.t1.exon1;Parent=MS.gene33573.t1 |
| chr1.3 | CDS | 71113879 | 71113964 | 71113879 | ID=cds.MS.gene33573.t1;Parent=MS.gene33573.t1 |
| chr1.3 | exon | 71113461 | 71113773 | 71113461 | ID=MS.gene33573.t1.exon2;Parent=MS.gene33573.t1 |
| chr1.3 | CDS | 71113461 | 71113773 | 71113461 | ID=cds.MS.gene33573.t1;Parent=MS.gene33573.t1 |
| chr1.3 | exon | 71110109 | 71111356 | 71110109 | ID=MS.gene33573.t1.exon3;Parent=MS.gene33573.t1 |
| chr1.3 | CDS | 71110109 | 71111356 | 71110109 | ID=cds.MS.gene33573.t1;Parent=MS.gene33573.t1 |
| chr1.3 | exon | 71109905 | 71109994 | 71109905 | ID=MS.gene33573.t1.exon4;Parent=MS.gene33573.t1 |
| chr1.3 | CDS | 71109905 | 71109994 | 71109905 | ID=cds.MS.gene33573.t1;Parent=MS.gene33573.t1 |
| Gene Sequence |
| Protein sequence |
