Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018379.t1 | XP_003610217.1 | 96.9 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.00E+00 | 1609.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018379.t1 | Q9ZV48 | 66.2 | 790 | 254 | 6 | 24 | 803 | 49 | 835 | 0.0e+00 | 1093.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018379.t1 | G7JEA0 | 96.9 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.0e+00 | 1609.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018379 | MS.gene73417 | PPI |
| MS.gene045478 | MS.gene018379 | PPI |
| MS.gene018379 | MS.gene029463 | PPI |
| MS.gene018379 | MS.gene71778 | PPI |
| MS.gene018379 | MS.gene75183 | PPI |
| MS.gene018379 | MS.gene040931 | PPI |
| MS.gene95835 | MS.gene018379 | PPI |
| MS.gene018379 | MS.gene031592 | PPI |
| MS.gene018379 | MS.gene006702 | PPI |
| MS.gene62674 | MS.gene018379 | PPI |
| MS.gene018379 | MS.gene71003 | PPI |
| MS.gene038603 | MS.gene018379 | PPI |
| MS.gene83030 | MS.gene018379 | PPI |
| MS.gene018379 | MS.gene95324 | PPI |
| MS.gene018379 | MS.gene015639 | PPI |
| MS.gene018379 | MS.gene009143 | PPI |
| MS.gene018379 | MS.gene026499 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018379.t1 | MTR_4g129270 | 96.929 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.0 | 1640 |
| MS.gene018379.t1 | MTR_4g129270 | 96.814 | 722 | 19 | 1 | 1 | 718 | 32 | 753 | 0.0 | 1455 |
| MS.gene018379.t1 | MTR_8g063790 | 61.995 | 792 | 287 | 5 | 24 | 805 | 52 | 839 | 0.0 | 1036 |
| MS.gene018379.t1 | MTR_1g109620 | 60.401 | 798 | 302 | 7 | 17 | 806 | 53 | 844 | 0.0 | 1006 |
| MS.gene018379.t1 | MTR_8g105740 | 58.437 | 806 | 316 | 8 | 12 | 803 | 47 | 847 | 0.0 | 997 |
| MS.gene018379.t1 | MTR_1g032730 | 59.023 | 798 | 308 | 8 | 24 | 807 | 61 | 853 | 0.0 | 990 |
| MS.gene018379.t1 | MTR_4g080160 | 58.503 | 788 | 311 | 6 | 26 | 803 | 67 | 848 | 0.0 | 974 |
| MS.gene018379.t1 | MTR_3g078210 | 53.316 | 754 | 340 | 6 | 46 | 793 | 5 | 752 | 0.0 | 811 |
| MS.gene018379.t1 | MTR_3g467030 | 46.103 | 603 | 285 | 7 | 27 | 623 | 1 | 569 | 3.09e-172 | 509 |
| MS.gene018379.t1 | MTR_0034s0170 | 35.458 | 753 | 427 | 20 | 24 | 756 | 83 | 796 | 3.38e-136 | 427 |
| MS.gene018379.t1 | MTR_2g073260 | 33.641 | 758 | 435 | 20 | 24 | 757 | 122 | 835 | 3.57e-133 | 420 |
| MS.gene018379.t1 | MTR_8g087910 | 40.741 | 324 | 178 | 7 | 23 | 344 | 74 | 385 | 6.64e-71 | 238 |
| MS.gene018379.t1 | MTR_8g087930 | 29.953 | 424 | 249 | 13 | 350 | 757 | 10 | 401 | 3.57e-50 | 185 |
| MS.gene018379.t1 | MTR_3g076810 | 46.154 | 156 | 74 | 4 | 6 | 154 | 17 | 169 | 4.49e-35 | 131 |
| MS.gene018379.t1 | MTR_3g467040 | 45.133 | 113 | 61 | 1 | 448 | 559 | 110 | 222 | 1.30e-26 | 109 |
| MS.gene018379.t1 | MTR_3g467040 | 37.931 | 116 | 70 | 1 | 271 | 386 | 1 | 114 | 2.21e-18 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018379.t1 | AT2G18700 | 66.203 | 790 | 254 | 6 | 24 | 803 | 49 | 835 | 0.0 | 1103 |
| MS.gene018379.t1 | AT1G23870 | 60.656 | 793 | 298 | 5 | 24 | 806 | 58 | 846 | 0.0 | 1033 |
| MS.gene018379.t1 | AT1G70290 | 60.483 | 787 | 294 | 7 | 24 | 800 | 56 | 835 | 0.0 | 998 |
| MS.gene018379.t1 | AT4G17770 | 59.391 | 788 | 307 | 5 | 26 | 804 | 61 | 844 | 0.0 | 992 |
| MS.gene018379.t1 | AT4G17770 | 59.391 | 788 | 307 | 5 | 26 | 804 | 61 | 844 | 0.0 | 992 |
| MS.gene018379.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene018379.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene018379.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene018379.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene018379.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 989 |
| MS.gene018379.t1 | AT1G06410 | 57.789 | 796 | 315 | 8 | 26 | 810 | 60 | 845 | 0.0 | 972 |
| MS.gene018379.t1 | AT1G06410 | 57.789 | 796 | 315 | 8 | 26 | 810 | 60 | 845 | 0.0 | 972 |
| MS.gene018379.t1 | AT1G06410 | 57.789 | 796 | 315 | 8 | 26 | 810 | 60 | 845 | 0.0 | 972 |
| MS.gene018379.t1 | AT1G68020 | 57.160 | 810 | 316 | 8 | 21 | 803 | 49 | 854 | 0.0 | 967 |
| MS.gene018379.t1 | AT1G68020 | 57.160 | 810 | 316 | 8 | 21 | 803 | 49 | 854 | 0.0 | 967 |
| MS.gene018379.t1 | AT1G70290 | 55.909 | 787 | 292 | 8 | 24 | 800 | 56 | 797 | 0.0 | 899 |
| MS.gene018379.t1 | AT1G60140 | 59.353 | 711 | 274 | 5 | 14 | 718 | 53 | 754 | 0.0 | 898 |
| MS.gene018379.t1 | AT1G68020 | 57.480 | 635 | 243 | 7 | 21 | 632 | 49 | 679 | 0.0 | 769 |
| MS.gene018379.t1 | AT1G16980 | 33.087 | 813 | 473 | 22 | 24 | 808 | 11 | 780 | 8.55e-135 | 421 |
| MS.gene018379.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 1.04e-134 | 424 |
| MS.gene018379.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 1.04e-134 | 424 |
| MS.gene018379.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 1.04e-134 | 424 |
| MS.gene018379.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 1.04e-134 | 424 |
| MS.gene018379.t1 | AT4G27550 | 31.790 | 821 | 472 | 20 | 24 | 799 | 3 | 780 | 1.09e-126 | 398 |
| MS.gene018379.t1 | AT4G27550 | 31.630 | 822 | 481 | 20 | 24 | 799 | 3 | 789 | 9.71e-126 | 396 |
| MS.gene018379.t1 | AT1G16980 | 34.169 | 638 | 363 | 17 | 22 | 645 | 9 | 603 | 3.67e-111 | 354 |
Find 158 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGGAAGGTTCTGATTT+TGG | 0.120895 | 8.2:+5157252 | MS.gene018379:CDS |
| CAAGAAGCAGATCCTGATTT+TGG | 0.199178 | 8.2:+5158530 | MS.gene018379:CDS |
| ATGATCCTGTAGTAGTTAAA+AGG | 0.228717 | 8.2:+5158603 | MS.gene018379:CDS |
| ATTCTTCGTTTACGAGAAAT+TGG | 0.240051 | 8.2:-5156428 | None:intergenic |
| ATATTTGTCATTAACTTCTT+TGG | 0.249338 | 8.2:-5157449 | None:intergenic |
| AATATTGTCGTTGAAACTTC+TGG | 0.252033 | 8.2:-5156382 | None:intergenic |
| TGGAGGGGAATGAGAAATTA+AGG | 0.263134 | 8.2:+5157338 | MS.gene018379:CDS |
| CAAGTGTTTGCATGCACTAT+TGG | 0.286479 | 8.2:+5159149 | MS.gene018379:CDS |
| TTTGGCATTGAGGAATCTTT+TGG | 0.299694 | 8.2:+5157318 | MS.gene018379:CDS |
| TTCACTCAGCGGGGCGGTTC+GGG | 0.301816 | 8.2:+5157723 | MS.gene018379:CDS |
| CTTCACTCAGCGGGGCGGTT+CGG | 0.306761 | 8.2:+5157722 | MS.gene018379:CDS |
| CTCTCATGACGTAGCGTATT+GGG | 0.309302 | 8.2:+5157852 | MS.gene018379:CDS |
| TGCGTTTCAATTCTTCTCAT+TGG | 0.309786 | 8.2:+5156768 | MS.gene018379:CDS |
| TTGGATTTGTTCAAAGGTAT+TGG | 0.319105 | 8.2:+5157286 | MS.gene018379:CDS |
| AAGTAGGGCTAAATACTATT+TGG | 0.326557 | 8.2:+5159181 | MS.gene018379:CDS |
| GTTTCTGTAAGCATTATCTT+TGG | 0.328259 | 8.2:+5156702 | MS.gene018379:CDS |
| AATTAACAAAGCTCCTAGTT+TGG | 0.333947 | 8.2:+5158083 | MS.gene018379:CDS |
| GGTTCATGATTATCATCTAA+TGG | 0.341092 | 8.2:+5156868 | MS.gene018379:CDS |
| AAAGAAGTTAATGACAAATA+TGG | 0.343946 | 8.2:+5157451 | MS.gene018379:CDS |
| TGGATTTGTTCAAAGGTATT+GGG | 0.345683 | 8.2:+5157287 | MS.gene018379:CDS |
| AGGCCAATTGTTTGTATAAA+CGG | 0.358705 | 8.2:+5157493 | MS.gene018379:CDS |
| AATACAGTGTTCATTGTTAG+TGG | 0.360290 | 8.2:+5158147 | MS.gene018379:CDS |
| TTTAACTACTACAGGATCAT+TGG | 0.373736 | 8.2:-5158600 | None:intergenic |
| CCACTTGGGTCTTCTCGAAT+CGG | 0.381711 | 8.2:+5157177 | MS.gene018379:CDS |
| ATCATTGTTTCTGAGTTCAT+TGG | 0.382781 | 8.2:+5157691 | MS.gene018379:CDS |
| TAGACAAGGAAGTGTTGAAT+TGG | 0.390593 | 8.2:+5157624 | MS.gene018379:CDS |
| AAATACTATTTGGATGATAC+TGG | 0.392235 | 8.2:+5159191 | MS.gene018379:CDS |
| GCTTGCCACAGTCCAAAATC+AGG | 0.397022 | 8.2:-5158542 | None:intergenic |
| ATCCTGATGAAGATTATGTT+TGG | 0.404447 | 8.2:+5156846 | MS.gene018379:CDS |
| CAAAACCTCGCGAACCTTGT+CGG | 0.407094 | 8.2:-5156822 | None:intergenic |
| CCTAGACATAGAAGAAAATC+TGG | 0.408487 | 8.2:-5159062 | None:intergenic |
| GCAACTTCTTCTTGTTGTGA+TGG | 0.411196 | 8.2:-5156605 | None:intergenic |
| CTCAAGATATATGTGGGATT+AGG | 0.419772 | 8.2:+5157922 | MS.gene018379:CDS |
| CTAAGTATTTCTTCACGAAC+AGG | 0.420112 | 8.2:-5156986 | None:intergenic |
| TTGTAGCAGGATGTTGGGTT+TGG | 0.421912 | 8.2:+5157075 | MS.gene018379:CDS |
| CAGTGTTCATTGTTAGTGGC+AGG | 0.422219 | 8.2:+5158151 | MS.gene018379:CDS |
| CTTGTCGGCAAAGATTCTAT+TGG | 0.423981 | 8.2:-5156807 | None:intergenic |
| GACTGATGGCAGGTGGAGTA+AGG | 0.425232 | 8.2:+5158370 | MS.gene018379:intron |
| GGACCGTTTATACAAACAAT+TGG | 0.426572 | 8.2:-5157496 | None:intergenic |
| GCCTTCTCCTGAGTCGAAAC+CGG | 0.435832 | 8.2:-5157517 | None:intergenic |
| TGATGGCACCATGATGCCTC+AGG | 0.435835 | 8.2:+5158056 | MS.gene018379:CDS |
| AAATAGTATTTAGCCCTACT+TGG | 0.436019 | 8.2:-5159179 | None:intergenic |
| TCTTCCTGTGGGGATCCACT+TGG | 0.443453 | 8.2:+5157162 | MS.gene018379:CDS |
| GTCTTGTTGTAGCAGGATGT+TGG | 0.445329 | 8.2:+5157069 | MS.gene018379:CDS |
| GCTCTCATGACGTAGCGTAT+TGG | 0.446089 | 8.2:+5157851 | MS.gene018379:CDS |
| TTGTTGAACTGTGATTTGAT+TGG | 0.446772 | 8.2:+5157013 | MS.gene018379:CDS |
| TGATCCTGTAGTAGTTAAAA+GGG | 0.447623 | 8.2:+5158604 | MS.gene018379:CDS |
| AAACGGTCCGGTTTCGACTC+AGG | 0.449305 | 8.2:+5157510 | MS.gene018379:CDS |
| GTTGTTCGCCTTCACTCAGC+GGG | 0.449644 | 8.2:+5157713 | MS.gene018379:CDS |
| TACATTGGTGTTGATTACTT+TGG | 0.450702 | 8.2:+5157118 | MS.gene018379:CDS |
| TTGGAAAATTAATGTAGAAA+AGG | 0.451444 | 8.2:+5158433 | MS.gene018379:CDS |
| AGGATTTAGAGAGAGCTTGT+AGG | 0.454660 | 8.2:+5157890 | MS.gene018379:CDS |
| TCTTGTTGTAGCAGGATGTT+GGG | 0.455109 | 8.2:+5157070 | MS.gene018379:CDS |
| CTGTTCGTGAAGAAATACTT+AGG | 0.456072 | 8.2:+5156987 | MS.gene018379:CDS |
| GTGATGAACAATCTGGGTAT+AGG | 0.457022 | 8.2:+5157473 | MS.gene018379:CDS |
| GATGACTTGGATTTGTTCAA+AGG | 0.461719 | 8.2:+5157280 | MS.gene018379:CDS |
| GTTCTGTAGATTTCTGAAGT+AGG | 0.470644 | 8.2:-5156959 | None:intergenic |
| GGATTTAGAGAGAGCTTGTA+GGG | 0.471625 | 8.2:+5157891 | MS.gene018379:CDS |
| GAAGAAAGAATTTGAAGGGA+AGG | 0.471883 | 8.2:+5157240 | MS.gene018379:CDS |
| AAATATGGTGATGAACAATC+TGG | 0.477180 | 8.2:+5157466 | MS.gene018379:CDS |
| TTACGAGAAATTGGTGATGA+AGG | 0.479580 | 8.2:-5156419 | None:intergenic |
| TCCTGATGAAGATTATGTTT+GGG | 0.480347 | 8.2:+5156847 | MS.gene018379:CDS |
| CGTTGGTTCGTTAAAATCAC+AGG | 0.480855 | 8.2:+5156571 | MS.gene018379:CDS |
| TTGTGACTTGAAATTCGAAT+GGG | 0.482906 | 8.2:+5156487 | MS.gene018379:CDS |
| TTGGATTATGAGTCTAAAAG+AGG | 0.484605 | 8.2:+5157094 | MS.gene018379:CDS |
| CTTGTGACTTGAAATTCGAA+TGG | 0.485275 | 8.2:+5156486 | MS.gene018379:CDS |
| CTTCCTGTGGGGATCCACTT+GGG | 0.488733 | 8.2:+5157163 | MS.gene018379:CDS |
| ACCCAAACATAATCTTCATC+AGG | 0.489582 | 8.2:-5156848 | None:intergenic |
| TCCTTGGACGACTCTCGGAT+TGG | 0.489717 | 8.2:+5158397 | MS.gene018379:CDS |
| TGTTCACCTTGAGAGTATGC+TGG | 0.489913 | 8.2:+5158577 | MS.gene018379:CDS |
| GAACTCTGCAATCAAAATGA+AGG | 0.490743 | 8.2:+5157783 | MS.gene018379:CDS |
| AATTGTTTGTATAAACGGTC+CGG | 0.492336 | 8.2:+5157498 | MS.gene018379:CDS |
| TGGTCATGTTATCAGACTGC+TGG | 0.493365 | 8.2:+5159211 | MS.gene018379:CDS |
| TGACTTCTCCTCATTCCTCA+TGG | 0.494550 | 8.2:-5159039 | None:intergenic |
| ATTAAGGGGTGAAGTTGTGT+TGG | 0.495890 | 8.2:+5157354 | MS.gene018379:CDS |
| CGTCCTCTGAAACAGCTAAG+AGG | 0.495992 | 8.2:+5157206 | MS.gene018379:CDS |
| AGTTGAAGAAAGAATTTGAA+GGG | 0.498193 | 8.2:+5157236 | MS.gene018379:CDS |
| GTGTTCATTGTTAGTGGCAG+GGG | 0.498938 | 8.2:+5158153 | MS.gene018379:CDS |
| AAACGTTTCCTCAAGTAAGT+TGG | 0.499254 | 8.2:-5156896 | None:intergenic |
| TGGTGCCATCATAGTCCAAA+AGG | 0.499691 | 8.2:-5158044 | None:intergenic |
| TGTTCGTGAAGAAATACTTA+GGG | 0.500357 | 8.2:+5156988 | MS.gene018379:CDS |
| ACCATCAAAATTCTTCCTGT+GGG | 0.500384 | 8.2:+5157151 | MS.gene018379:CDS |
| GTAGAGTTTGCCTTAGCGAC+TGG | 0.503290 | 8.2:+5158175 | MS.gene018379:CDS |
| GGAGGGGAATGAGAAATTAA+GGG | 0.505727 | 8.2:+5157339 | MS.gene018379:CDS |
| GATTCTCCTTGGACGACTCT+CGG | 0.514630 | 8.2:+5158392 | MS.gene018379:CDS |
| AAGTCACAAGAAGCGCGTAT+TGG | 0.516480 | 8.2:-5156473 | None:intergenic |
| CACTTGTGATGTGGTTGGTA+AGG | 0.520338 | 8.2:-5159132 | None:intergenic |
| GTTGAATTGGACAAAGCCCT+TGG | 0.526550 | 8.2:+5157637 | MS.gene018379:CDS |
| GGGCGGTTCGGGTGAATCCG+TGG | 0.535674 | 8.2:+5157734 | MS.gene018379:CDS |
| TACCATCAAAATTCTTCCTG+TGG | 0.542727 | 8.2:+5157150 | MS.gene018379:CDS |
| TTGTGAATGCTGTGAGGGAT+GGG | 0.545495 | 8.2:+5157569 | MS.gene018379:CDS |
| GAGTAGCGGAAAAGATATCC+AGG | 0.550385 | 8.2:+5157399 | MS.gene018379:CDS |
| GCATTATCTCAAGATATATG+TGG | 0.551844 | 8.2:+5157915 | MS.gene018379:CDS |
| CAATAGAATCTTTGCCGACA+AGG | 0.552855 | 8.2:+5156808 | MS.gene018379:CDS |
| ATGGAGAAAACCAGTCGCTA+AGG | 0.553868 | 8.2:-5158185 | None:intergenic |
| TCCGGTTTCGACTCAGGAGA+AGG | 0.554779 | 8.2:+5157516 | MS.gene018379:CDS |
| CACCCTCTTAGCTGTTTCAG+AGG | 0.556372 | 8.2:-5157209 | None:intergenic |
| CAATCTCAAACTTCACATCC+TGG | 0.558555 | 8.2:-5157417 | None:intergenic |
| CTATTGGTTATAAACCAAGT+AGG | 0.558755 | 8.2:+5159165 | MS.gene018379:CDS |
| TATTGTTGAAGTAAAACCTC+AGG | 0.563515 | 8.2:+5158634 | MS.gene018379:CDS |
| GAGTTGAAGAAAGAATTTGA+AGG | 0.566060 | 8.2:+5157235 | MS.gene018379:CDS |
| TGATGAAGGAAGTGAAAGGT+TGG | 0.568415 | 8.2:-5156405 | None:intergenic |
| CTACAAACAGTATACTCGTA+AGG | 0.570286 | 8.2:-5157604 | None:intergenic |
| TCATTGGCTTGCATACAAGA+AGG | 0.571083 | 8.2:+5156784 | MS.gene018379:CDS |
| CAGAACATGGTTACTTCACA+AGG | 0.571206 | 8.2:+5158229 | MS.gene018379:CDS |
| AGTGTTCATTGTTAGTGGCA+GGG | 0.574176 | 8.2:+5158152 | MS.gene018379:CDS |
| GGTGGAGTAAGGATTCTCCT+TGG | 0.576529 | 8.2:+5158381 | MS.gene018379:intron |
| ATTGTGAATGCTGTGAGGGA+TGG | 0.578772 | 8.2:+5157568 | MS.gene018379:CDS |
| TATATCAACCATGAGGAATG+AGG | 0.581492 | 8.2:+5159031 | MS.gene018379:CDS |
| TATTGGTTATAAACCAAGTA+GGG | 0.583751 | 8.2:+5159166 | MS.gene018379:CDS |
| AGACCCAAGTGGATCCCCAC+AGG | 0.588284 | 8.2:-5157166 | None:intergenic |
| AGAGAGATAACATCCAAACT+AGG | 0.589770 | 8.2:-5158096 | None:intergenic |
| AAATCATTGTGAGTTTCAGA+AGG | 0.591816 | 8.2:-5156671 | None:intergenic |
| CGAACCGCCCCGCTGAGTGA+AGG | 0.592523 | 8.2:-5157721 | None:intergenic |
| AGACAAAGCTTCTTAAAACT+AGG | 0.593436 | 8.2:-5157976 | None:intergenic |
| AATATGGTGATGAACAATCT+GGG | 0.594049 | 8.2:+5157467 | MS.gene018379:CDS |
| GTCCTCTGAAACAGCTAAGA+GGG | 0.596114 | 8.2:+5157207 | MS.gene018379:CDS |
| AATTGATCCCTGAGGCATCA+TGG | 0.598853 | 8.2:-5158064 | None:intergenic |
| CTTTGCCGACAAGGTTCGCG+AGG | 0.599029 | 8.2:+5156817 | MS.gene018379:CDS |
| AATTAATGTAGAAAAGGTGA+TGG | 0.600049 | 8.2:+5158439 | MS.gene018379:CDS |
| CATTATCTCAAGATATATGT+GGG | 0.605992 | 8.2:+5157916 | MS.gene018379:CDS |
| TTCAGATTCTGAATCAAGCA+AGG | 0.606163 | 8.2:+5157377 | MS.gene018379:CDS |
| TGTGAGCAAAGGTAAAGTGG+TGG | 0.606477 | 8.2:+5159001 | MS.gene018379:CDS |
| GAGTCTAAAAGAGGTTACAT+TGG | 0.608056 | 8.2:+5157103 | MS.gene018379:CDS |
| TTGGGTCTCTCTGCAGAACA+TGG | 0.608980 | 8.2:+5158216 | MS.gene018379:CDS |
| TGTCGTTGAAACTTCTGGAA+CGG | 0.610383 | 8.2:-5156377 | None:intergenic |
| CTACCTCTGTCAAAGAGTCA+AGG | 0.612948 | 8.2:+5156743 | MS.gene018379:CDS |
| ACACCTTGACTCTTTGACAG+AGG | 0.613904 | 8.2:-5156746 | None:intergenic |
| CATTGGCCAGCATACTCTCA+AGG | 0.616590 | 8.2:-5158583 | None:intergenic |
| ATTGGACAAAGCCCTTGGAG+TGG | 0.616712 | 8.2:+5157642 | MS.gene018379:CDS |
| GAGAGACCCAACTTGTCACA+TGG | 0.618405 | 8.2:-5158204 | None:intergenic |
| CTTTACACAGAAGCAACTGA+TGG | 0.620660 | 8.2:+5158464 | MS.gene018379:CDS |
| GGGTGTGAGCAAAGGTAAAG+TGG | 0.624595 | 8.2:+5158998 | MS.gene018379:intron |
| CTGAATCAAGCAAGGAGTAG+CGG | 0.626177 | 8.2:+5157385 | MS.gene018379:CDS |
| GCCAATCCGAGAGTCGTCCA+AGG | 0.627033 | 8.2:-5158398 | None:intergenic |
| GTTCGTGAAGAAATACTTAG+GGG | 0.627972 | 8.2:+5156989 | MS.gene018379:CDS |
| GGTAGCATGTAGTGAAACAA+AGG | 0.628237 | 8.2:-5156725 | None:intergenic |
| TTCGCCTTCACTCAGCGGGG+CGG | 0.628380 | 8.2:+5157717 | MS.gene018379:CDS |
| GATGGCACCATGATGCCTCA+GGG | 0.629851 | 8.2:+5158057 | MS.gene018379:CDS |
| GAGTATACTGTTTGTAGACA+AGG | 0.631640 | 8.2:+5157610 | MS.gene018379:CDS |
| GGTTGTTCGCCTTCACTCAG+CGG | 0.632472 | 8.2:+5157712 | MS.gene018379:CDS |
| TTGCATTGTGAATGCTGTGA+GGG | 0.638559 | 8.2:+5157564 | MS.gene018379:CDS |
| GAAACATCGTCAATGTTCCA+CGG | 0.640645 | 8.2:-5157751 | None:intergenic |
| CCTTGGAGTGGAAAATGATG+AGG | 0.642829 | 8.2:+5157654 | MS.gene018379:CDS |
| CATGTTATCAGACTGCTGGA+AGG | 0.643775 | 8.2:+5159215 | MS.gene018379:CDS |
| GAGGGGAATGAGAAATTAAG+GGG | 0.646856 | 8.2:+5157340 | MS.gene018379:CDS |
| TTTGGTATCTCTGTAAGCAG+GGG | 0.647241 | 8.2:-5158010 | None:intergenic |
| CCATCAAAATTCTTCCTGTG+GGG | 0.656062 | 8.2:+5157152 | MS.gene018379:CDS |
| GCAAACACTTGTGATGTGGT+TGG | 0.661634 | 8.2:-5159137 | None:intergenic |
| GATCCTGTAGTAGTTAAAAG+GGG | 0.670223 | 8.2:+5158605 | MS.gene018379:CDS |
| CCGATTCGAGAAGACCCAAG+TGG | 0.687544 | 8.2:-5157177 | None:intergenic |
| GAAATGCAGGGTGTGAGCAA+AGG | 0.693831 | 8.2:+5158990 | MS.gene018379:intron |
| GCATGCAAACACTTGTGATG+TGG | 0.707983 | 8.2:-5159141 | None:intergenic |
| TTGGTGATGAAGGAAGTGAA+AGG | 0.728881 | 8.2:-5156409 | None:intergenic |
| GTTGCATTGTGAATGCTGTG+AGG | 0.729569 | 8.2:+5157563 | MS.gene018379:CDS |
| AAGAGCTTATATCAACCATG+AGG | 0.738943 | 8.2:+5159024 | MS.gene018379:CDS |
| GCTTTGTTAATTGATCCCTG+AGG | 0.743258 | 8.2:-5158072 | None:intergenic |
| TTGTTCGCCTTCACTCAGCG+GGG | 0.757164 | 8.2:+5157714 | MS.gene018379:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTTTAATTTTCATACA+CGG | - | chr8.2:5158941-5158960 | None:intergenic | 15.0% |
| !!! | TTAAACTTTTTCTTTTGTAA+TGG | + | chr8.2:5158951-5158970 | MS.gene018379:intron | 15.0% |
| !! | AAAGAAGTTAATGACAAATA+TGG | + | chr8.2:5157451-5157470 | MS.gene018379:CDS | 20.0% |
| !! | ATATTTGTCATTAACTTCTT+TGG | - | chr8.2:5157452-5157471 | None:intergenic | 20.0% |
| !! | CGAATAATTAATCTTTCATT+TGG | - | chr8.2:5158722-5158741 | None:intergenic | 20.0% |
| !! | TTGGAAAATTAATGTAGAAA+AGG | + | chr8.2:5158433-5158452 | MS.gene018379:CDS | 20.0% |
| !!! | AAACTTTTCTAACAAAACTT+TGG | - | chr8.2:5156630-5156649 | None:intergenic | 20.0% |
| !!! | TAATTTTAGAATCATTGCTT+TGG | + | chr8.2:5157951-5157970 | MS.gene018379:CDS | 20.0% |
| !!! | TATTCGTTTTATGATTTCAT+TGG | + | chr8.2:5158736-5158755 | MS.gene018379:intron | 20.0% |
| !!! | TTACTTGTTGATTCATTTTA+TGG | + | chr8.2:5158337-5158356 | MS.gene018379:intron | 20.0% |
| ! | AAAAAACCCAATTTCACTTT+AGG | - | chr8.2:5156923-5156942 | None:intergenic | 25.0% |
| ! | AAATACTATTTGGATGATAC+TGG | + | chr8.2:5159191-5159210 | MS.gene018379:CDS | 25.0% |
| ! | AATTAATGTAGAAAAGGTGA+TGG | + | chr8.2:5158439-5158458 | MS.gene018379:CDS | 25.0% |
| ! | AGTTGAAGAAAGAATTTGAA+GGG | + | chr8.2:5157236-5157255 | MS.gene018379:CDS | 25.0% |
| ! | CATTATCTCAAGATATATGT+GGG | + | chr8.2:5157916-5157935 | MS.gene018379:CDS | 25.0% |
| ! | GTCAATTAGAATTAGAATGA+AGG | + | chr8.2:5158758-5158777 | MS.gene018379:intron | 25.0% |
| ! | TTGTTTATTTATGATACCTG+AGG | - | chr8.2:5158653-5158672 | None:intergenic | 25.0% |
| !! | AACAATGAACACTGTATTTT+TGG | - | chr8.2:5158145-5158164 | None:intergenic | 25.0% |
| !! | ACAATGAACACTGTATTTTT+GGG | - | chr8.2:5158144-5158163 | None:intergenic | 25.0% |
| !! | ACTATCTTTTTCTTCAATGA+AGG | - | chr8.2:5158492-5158511 | None:intergenic | 25.0% |
| !! | ACTCACAATGATTTTTATCA+TGG | + | chr8.2:5156680-5156699 | MS.gene018379:CDS | 25.0% |
| !! | ATATATTTTCAGCTCAAAGA+CGG | + | chr8.2:5156521-5156540 | MS.gene018379:CDS | 25.0% |
| !! | TATTGGTTATAAACCAAGTA+GGG | + | chr8.2:5159166-5159185 | MS.gene018379:CDS | 25.0% |
| !!! | TTGTATTTTTGTGAAATGCA+GGG | + | chr8.2:5158978-5158997 | MS.gene018379:intron | 25.0% |
| AAAAAGATAGTGCAATGGTT+TGG | + | chr8.2:5158501-5158520 | MS.gene018379:CDS | 30.0% | |
| AAATAGTATTTAGCCCTACT+TGG | - | chr8.2:5159182-5159201 | None:intergenic | 30.0% | |
| AAATCATTGTGAGTTTCAGA+AGG | - | chr8.2:5156674-5156693 | None:intergenic | 30.0% | |
| AAGTAGGGCTAAATACTATT+TGG | + | chr8.2:5159181-5159200 | MS.gene018379:CDS | 30.0% | |
| AATACAGTGTTCATTGTTAG+TGG | + | chr8.2:5158147-5158166 | MS.gene018379:CDS | 30.0% | |
| AATATTGTCGTTGAAACTTC+TGG | - | chr8.2:5156385-5156404 | None:intergenic | 30.0% | |
| AATTAACAAAGCTCCTAGTT+TGG | + | chr8.2:5158083-5158102 | MS.gene018379:CDS | 30.0% | |
| AATTGTTTGTATAAACGGTC+CGG | + | chr8.2:5157498-5157517 | MS.gene018379:CDS | 30.0% | |
| AGACAAAGCTTCTTAAAACT+AGG | - | chr8.2:5157979-5157998 | None:intergenic | 30.0% | |
| AGGCCAATTGTTTGTATAAA+CGG | + | chr8.2:5157493-5157512 | MS.gene018379:CDS | 30.0% | |
| ATCCTGATGAAGATTATGTT+TGG | + | chr8.2:5156846-5156865 | MS.gene018379:CDS | 30.0% | |
| ATGATCCTGTAGTAGTTAAA+AGG | + | chr8.2:5158603-5158622 | MS.gene018379:CDS | 30.0% | |
| ATTCTTCGTTTACGAGAAAT+TGG | - | chr8.2:5156431-5156450 | None:intergenic | 30.0% | |
| GAGTTGAAGAAAGAATTTGA+AGG | + | chr8.2:5157235-5157254 | MS.gene018379:CDS | 30.0% | |
| GCATTATCTCAAGATATATG+TGG | + | chr8.2:5157915-5157934 | MS.gene018379:CDS | 30.0% | |
| GGTTCATGATTATCATCTAA+TGG | + | chr8.2:5156868-5156887 | MS.gene018379:CDS | 30.0% | |
| GTTTCAGAAGGTAAAAAAGT+TGG | - | chr8.2:5156662-5156681 | None:intergenic | 30.0% | |
| GTTTCTGTAAGCATTATCTT+TGG | + | chr8.2:5156702-5156721 | MS.gene018379:CDS | 30.0% | |
| TATTGTTGAAGTAAAACCTC+AGG | + | chr8.2:5158634-5158653 | MS.gene018379:CDS | 30.0% | |
| TCCTGATGAAGATTATGTTT+GGG | + | chr8.2:5156847-5156866 | MS.gene018379:CDS | 30.0% | |
| TCCTTGAAAAAACTCAAGAA+AGG | - | chr8.2:5158817-5158836 | None:intergenic | 30.0% | |
| TGAAGAAAAAGATAGTGCAA+TGG | + | chr8.2:5158496-5158515 | MS.gene018379:CDS | 30.0% | |
| TGATCCTGTAGTAGTTAAAA+GGG | + | chr8.2:5158604-5158623 | MS.gene018379:CDS | 30.0% | |
| TGTTCGTGAAGAAATACTTA+GGG | + | chr8.2:5156988-5157007 | MS.gene018379:CDS | 30.0% | |
| TTGGATTATGAGTCTAAAAG+AGG | + | chr8.2:5157094-5157113 | MS.gene018379:CDS | 30.0% | |
| TTGTGACTTGAAATTCGAAT+GGG | + | chr8.2:5156487-5156506 | MS.gene018379:CDS | 30.0% | |
| TTGTTGAACTGTGATTTGAT+TGG | + | chr8.2:5157013-5157032 | MS.gene018379:CDS | 30.0% | |
| TTTAACTACTACAGGATCAT+TGG | - | chr8.2:5158603-5158622 | None:intergenic | 30.0% | |
| ! | AAATATGGTGATGAACAATC+TGG | + | chr8.2:5157466-5157485 | MS.gene018379:CDS | 30.0% |
| ! | AATATGGTGATGAACAATCT+GGG | + | chr8.2:5157467-5157486 | MS.gene018379:CDS | 30.0% |
| ! | ACGTTTTCCTAAAGTGAAAT+TGG | + | chr8.2:5156913-5156932 | MS.gene018379:CDS | 30.0% |
| ! | CGTTTTCCTAAAGTGAAATT+GGG | + | chr8.2:5156914-5156933 | MS.gene018379:CDS | 30.0% |
| ! | CTATTGGTTATAAACCAAGT+AGG | + | chr8.2:5159165-5159184 | MS.gene018379:CDS | 30.0% |
| ! | TTGGATTTGTTCAAAGGTAT+TGG | + | chr8.2:5157286-5157305 | MS.gene018379:CDS | 30.0% |
| !! | ATCATTGTTTCTGAGTTCAT+TGG | + | chr8.2:5157691-5157710 | MS.gene018379:CDS | 30.0% |
| !! | CTTGTATTTTTGTGAAATGC+AGG | + | chr8.2:5158977-5158996 | MS.gene018379:intron | 30.0% |
| !! | TACATTGGTGTTGATTACTT+TGG | + | chr8.2:5157118-5157137 | MS.gene018379:CDS | 30.0% |
| !! | TGGATTTGTTCAAAGGTATT+GGG | + | chr8.2:5157287-5157306 | MS.gene018379:CDS | 30.0% |
| !!! | ATTTTTTGTCTTGTTGTAGC+AGG | + | chr8.2:5157062-5157081 | MS.gene018379:CDS | 30.0% |
| !!! | GATTCTGAAATCTTTTACGT+TGG | + | chr8.2:5156554-5156573 | MS.gene018379:CDS | 30.0% |
| !!! | TCCTTTCTTGAGTTTTTTCA+AGG | + | chr8.2:5158813-5158832 | MS.gene018379:intron | 30.0% |
| AAACGTTTCCTCAAGTAAGT+TGG | - | chr8.2:5156899-5156918 | None:intergenic | 35.0% | |
| AAGAGCTTATATCAACCATG+AGG | + | chr8.2:5159024-5159043 | MS.gene018379:CDS | 35.0% | |
| ACCATCAAAATTCTTCCTGT+GGG | + | chr8.2:5157151-5157170 | MS.gene018379:CDS | 35.0% | |
| ACCCAAACATAATCTTCATC+AGG | - | chr8.2:5156851-5156870 | None:intergenic | 35.0% | |
| AGAGAGATAACATCCAAACT+AGG | - | chr8.2:5158099-5158118 | None:intergenic | 35.0% | |
| AGGATTCCGAAAAACAATTG+CGG | + | chr8.2:5157803-5157822 | MS.gene018379:CDS | 35.0% | |
| CCTAGACATAGAAGAAAATC+TGG | - | chr8.2:5159065-5159084 | None:intergenic | 35.0% | |
| CTAAGTATTTCTTCACGAAC+AGG | - | chr8.2:5156989-5157008 | None:intergenic | 35.0% | |
| CTACAAACAGTATACTCGTA+AGG | - | chr8.2:5157607-5157626 | None:intergenic | 35.0% | |
| CTCAAGATATATGTGGGATT+AGG | + | chr8.2:5157922-5157941 | MS.gene018379:CDS | 35.0% | |
| CTGTTCGTGAAGAAATACTT+AGG | + | chr8.2:5156987-5157006 | MS.gene018379:CDS | 35.0% | |
| CTTACAGAGATACCAAAAAC+AGG | + | chr8.2:5158016-5158035 | MS.gene018379:CDS | 35.0% | |
| CTTGTGACTTGAAATTCGAA+TGG | + | chr8.2:5156486-5156505 | MS.gene018379:CDS | 35.0% | |
| GAACTCTGCAATCAAAATGA+AGG | + | chr8.2:5157783-5157802 | MS.gene018379:CDS | 35.0% | |
| GAAGAAAGAATTTGAAGGGA+AGG | + | chr8.2:5157240-5157259 | MS.gene018379:CDS | 35.0% | |
| GAGTATACTGTTTGTAGACA+AGG | + | chr8.2:5157610-5157629 | MS.gene018379:CDS | 35.0% | |
| GAGTCTAAAAGAGGTTACAT+TGG | + | chr8.2:5157103-5157122 | MS.gene018379:CDS | 35.0% | |
| GATCCTGTAGTAGTTAAAAG+GGG | + | chr8.2:5158605-5158624 | MS.gene018379:CDS | 35.0% | |
| GGACCGTTTATACAAACAAT+TGG | - | chr8.2:5157499-5157518 | None:intergenic | 35.0% | |
| GTTCGTGAAGAAATACTTAG+GGG | + | chr8.2:5156989-5157008 | MS.gene018379:CDS | 35.0% | |
| TACCATCAAAATTCTTCCTG+TGG | + | chr8.2:5157150-5157169 | MS.gene018379:CDS | 35.0% | |
| TATATCAACCATGAGGAATG+AGG | + | chr8.2:5159031-5159050 | MS.gene018379:CDS | 35.0% | |
| TGCGTTTCAATTCTTCTCAT+TGG | + | chr8.2:5156768-5156787 | MS.gene018379:CDS | 35.0% | |
| TTCAGATTCTGAATCAAGCA+AGG | + | chr8.2:5157377-5157396 | MS.gene018379:CDS | 35.0% | |
| TTGTCAATGTTGCATGATCT+TGG | + | chr8.2:5158306-5158325 | MS.gene018379:intron | 35.0% | |
| ! | CAAAAGGATCAACCTGTTTT+TGG | - | chr8.2:5158031-5158050 | None:intergenic | 35.0% |
| ! | CCAGATTTTCTTCTATGTCT+AGG | + | chr8.2:5159062-5159081 | MS.gene018379:CDS | 35.0% |
| ! | GATGACTTGGATTTGTTCAA+AGG | + | chr8.2:5157280-5157299 | MS.gene018379:CDS | 35.0% |
| ! | TTGATCCTTTTGGACTATGA+TGG | + | chr8.2:5158039-5158058 | MS.gene018379:CDS | 35.0% |
| ! | TTTTCTCCATGTGACAAGTT+GGG | + | chr8.2:5158198-5158217 | MS.gene018379:CDS | 35.0% |
| ! | TTTTGGTATCTCTGTAAGCA+GGG | - | chr8.2:5158014-5158033 | None:intergenic | 35.0% |
| !! | ATGGATTCCTTTTTGACTGA+TGG | + | chr8.2:5158356-5158375 | MS.gene018379:intron | 35.0% |
| !! | GATTGGCATCAGATTTTGAT+TGG | + | chr8.2:5158414-5158433 | MS.gene018379:CDS | 35.0% |
| !! | GTTCTGTAGATTTCTGAAGT+AGG | - | chr8.2:5156962-5156981 | None:intergenic | 35.0% |
| !! | TAGACAAGGAAGTGTTGAAT+TGG | + | chr8.2:5157624-5157643 | MS.gene018379:CDS | 35.0% |
| !! | TGGTTTTACCAACTTACTTG+AGG | + | chr8.2:5156888-5156907 | MS.gene018379:CDS | 35.0% |
| !! | TTACGAGAAATTGGTGATGA+AGG | - | chr8.2:5156422-5156441 | None:intergenic | 35.0% |
| !! | TTTGGCATTGAGGAATCTTT+TGG | + | chr8.2:5157318-5157337 | MS.gene018379:CDS | 35.0% |
| !! | TTTTTGGTATCTCTGTAAGC+AGG | - | chr8.2:5158015-5158034 | None:intergenic | 35.0% |
| !!! | AGGTATTGGGTTGAAGTTTT+TGG | + | chr8.2:5157300-5157319 | MS.gene018379:CDS | 35.0% |
| !!! | ATTTTTGGGATCACTGCATA+AGG | - | chr8.2:5158130-5158149 | None:intergenic | 35.0% |
| !!! | CAAAAACAGGTTGATCCTTT+TGG | + | chr8.2:5158029-5158048 | MS.gene018379:CDS | 35.0% |
| AGGATTTAGAGAGAGCTTGT+AGG | + | chr8.2:5157890-5157909 | MS.gene018379:CDS | 40.0% | |
| AGTGTTCATTGTTAGTGGCA+GGG | + | chr8.2:5158152-5158171 | MS.gene018379:CDS | 40.0% | |
| ATTAAGGGGTGAAGTTGTGT+TGG | + | chr8.2:5157354-5157373 | MS.gene018379:CDS | 40.0% | |
| CAAGTGTTTGCATGCACTAT+TGG | + | chr8.2:5159149-5159168 | MS.gene018379:CDS | 40.0% | |
| CAATAGAATCTTTGCCGACA+AGG | + | chr8.2:5156808-5156827 | MS.gene018379:CDS | 40.0% | |
| CAATCTCAAACTTCACATCC+TGG | - | chr8.2:5157420-5157439 | None:intergenic | 40.0% | |
| CAGAACATGGTTACTTCACA+AGG | + | chr8.2:5158229-5158248 | MS.gene018379:CDS | 40.0% | |
| CCATCAAAATTCTTCCTGTG+GGG | + | chr8.2:5157152-5157171 | MS.gene018379:CDS | 40.0% | |
| CTTGTCGGCAAAGATTCTAT+TGG | - | chr8.2:5156810-5156829 | None:intergenic | 40.0% | |
| CTTTACACAGAAGCAACTGA+TGG | + | chr8.2:5158464-5158483 | MS.gene018379:CDS | 40.0% | |
| GAAACATCGTCAATGTTCCA+CGG | - | chr8.2:5157754-5157773 | None:intergenic | 40.0% | |
| GAGGGGAATGAGAAATTAAG+GGG | + | chr8.2:5157340-5157359 | MS.gene018379:CDS | 40.0% | |
| GGAGGGGAATGAGAAATTAA+GGG | + | chr8.2:5157339-5157358 | MS.gene018379:CDS | 40.0% | |
| GGATTTAGAGAGAGCTTGTA+GGG | + | chr8.2:5157891-5157910 | MS.gene018379:CDS | 40.0% | |
| GGTAGCATGTAGTGAAACAA+AGG | - | chr8.2:5156728-5156747 | None:intergenic | 40.0% | |
| GTGATGAACAATCTGGGTAT+AGG | + | chr8.2:5157473-5157492 | MS.gene018379:CDS | 40.0% | |
| TGATGAAGGAAGTGAAAGGT+TGG | - | chr8.2:5156408-5156427 | None:intergenic | 40.0% | |
| TGGAGGGGAATGAGAAATTA+AGG | + | chr8.2:5157338-5157357 | MS.gene018379:CDS | 40.0% | |
| TTGCATTGTGAATGCTGTGA+GGG | + | chr8.2:5157564-5157583 | MS.gene018379:CDS | 40.0% | |
| TTTGGTATCTCTGTAAGCAG+GGG | - | chr8.2:5158013-5158032 | None:intergenic | 40.0% | |
| ! | CAAGAAGCAGATCCTGATTT+TGG | + | chr8.2:5158530-5158549 | MS.gene018379:CDS | 40.0% |
| ! | CTCATCATTTTCCACTCCAA+GGG | - | chr8.2:5157656-5157675 | None:intergenic | 40.0% |
| ! | GCAACTTCTTCTTGTTGTGA+TGG | - | chr8.2:5156608-5156627 | None:intergenic | 40.0% |
| ! | GCATTGAGGAATCTTTTGGA+GGG | + | chr8.2:5157322-5157341 | MS.gene018379:CDS | 40.0% |
| ! | GCTTTGTTAATTGATCCCTG+AGG | - | chr8.2:5158075-5158094 | None:intergenic | 40.0% |
| ! | GTTTTCTCCATGTGACAAGT+TGG | + | chr8.2:5158197-5158216 | MS.gene018379:CDS | 40.0% |
| ! | TCTTGTTGTAGCAGGATGTT+GGG | + | chr8.2:5157070-5157089 | MS.gene018379:CDS | 40.0% |
| ! | TGTCGTTGAAACTTCTGGAA+CGG | - | chr8.2:5156380-5156399 | None:intergenic | 40.0% |
| !! | AAGGGAAGGTTCTGATTTTG+GGG | + | chr8.2:5157254-5157273 | MS.gene018379:CDS | 40.0% |
| !! | ATTCCTTTTTGACTGATGGC+AGG | + | chr8.2:5158360-5158379 | MS.gene018379:intron | 40.0% |
| !! | CATTGAGGAATCTTTTGGAG+GGG | + | chr8.2:5157323-5157342 | MS.gene018379:CDS | 40.0% |
| !! | CGTTGGTTCGTTAAAATCAC+AGG | + | chr8.2:5156571-5156590 | MS.gene018379:CDS | 40.0% |
| !! | CTTGTGCCGCAATTGTTTTT+CGG | - | chr8.2:5157812-5157831 | None:intergenic | 40.0% |
| !! | GAAGGGAAGGTTCTGATTTT+GGG | + | chr8.2:5157253-5157272 | MS.gene018379:CDS | 40.0% |
| !! | TCATTGGCTTGCATACAAGA+AGG | + | chr8.2:5156784-5156803 | MS.gene018379:CDS | 40.0% |
| !! | TGAAGGGAAGGTTCTGATTT+TGG | + | chr8.2:5157252-5157271 | MS.gene018379:CDS | 40.0% |
| !! | TGTCCCCTTTTAACTACTAC+AGG | - | chr8.2:5158611-5158630 | None:intergenic | 40.0% |
| !! | TTGGGCTAAGAGTTTTGATC+AGG | + | chr8.2:5157870-5157889 | MS.gene018379:CDS | 40.0% |
| !! | TTGGTGATGAAGGAAGTGAA+AGG | - | chr8.2:5156412-5156431 | None:intergenic | 40.0% |
| !!! | GGTTGAAGTTTTTGGCATTG+AGG | + | chr8.2:5157308-5157327 | MS.gene018379:CDS | 40.0% |
| ACACCTTGACTCTTTGACAG+AGG | - | chr8.2:5156749-5156768 | None:intergenic | 45.0% | |
| ATGGAGAAAACCAGTCGCTA+AGG | - | chr8.2:5158188-5158207 | None:intergenic | 45.0% | |
| ATTGTGAATGCTGTGAGGGA+TGG | + | chr8.2:5157568-5157587 | MS.gene018379:CDS | 45.0% | |
| CAGTGTTCATTGTTAGTGGC+AGG | + | chr8.2:5158151-5158170 | MS.gene018379:CDS | 45.0% | |
| CATGTTATCAGACTGCTGGA+AGG | + | chr8.2:5159215-5159234 | MS.gene018379:CDS | 45.0% | |
| CCTTGGAGTGGAAAATGATG+AGG | + | chr8.2:5157654-5157673 | MS.gene018379:CDS | 45.0% | |
| CTACCTCTGTCAAAGAGTCA+AGG | + | chr8.2:5156743-5156762 | MS.gene018379:CDS | 45.0% | |
| CTCTCATGACGTAGCGTATT+GGG | + | chr8.2:5157852-5157871 | MS.gene018379:CDS | 45.0% | |
| CTGAATCAAGCAAGGAGTAG+CGG | + | chr8.2:5157385-5157404 | MS.gene018379:CDS | 45.0% | |
| GCAAACACTTGTGATGTGGT+TGG | - | chr8.2:5159140-5159159 | None:intergenic | 45.0% | |
| GCATGCAAACACTTGTGATG+TGG | - | chr8.2:5159144-5159163 | None:intergenic | 45.0% | |
| GTGTTCATTGTTAGTGGCAG+GGG | + | chr8.2:5158153-5158172 | MS.gene018379:CDS | 45.0% | |
| GTTGAATTGGACAAAGCCCT+TGG | + | chr8.2:5157637-5157656 | MS.gene018379:CDS | 45.0% | |
| GTTGCATTGTGAATGCTGTG+AGG | + | chr8.2:5157563-5157582 | MS.gene018379:CDS | 45.0% | |
| TGACTTCTCCTCATTCCTCA+TGG | - | chr8.2:5159042-5159061 | None:intergenic | 45.0% | |
| TGGTCATGTTATCAGACTGC+TGG | + | chr8.2:5159211-5159230 | MS.gene018379:CDS | 45.0% | |
| TGTGAGCAAAGGTAAAGTGG+TGG | + | chr8.2:5159001-5159020 | MS.gene018379:CDS | 45.0% | |
| TTGTAGCAGGATGTTGGGTT+TGG | + | chr8.2:5157075-5157094 | MS.gene018379:CDS | 45.0% | |
| TTGTGAATGCTGTGAGGGAT+GGG | + | chr8.2:5157569-5157588 | MS.gene018379:CDS | 45.0% | |
| ! | AAGTCACAAGAAGCGCGTAT+TGG | - | chr8.2:5156476-5156495 | None:intergenic | 45.0% |
| ! | AATTGATCCCTGAGGCATCA+TGG | - | chr8.2:5158067-5158086 | None:intergenic | 45.0% |
| ! | CACTTGTGATGTGGTTGGTA+AGG | - | chr8.2:5159135-5159154 | None:intergenic | 45.0% |
| ! | CAGATCCTGATTTTGGACTG+TGG | + | chr8.2:5158537-5158556 | MS.gene018379:CDS | 45.0% |
| ! | CCCCACAGGAAGAATTTTGA+TGG | - | chr8.2:5157155-5157174 | None:intergenic | 45.0% |
| ! | CCTCATCATTTTCCACTCCA+AGG | - | chr8.2:5157657-5157676 | None:intergenic | 45.0% |
| ! | GAGTAGCGGAAAAGATATCC+AGG | + | chr8.2:5157399-5157418 | MS.gene018379:CDS | 45.0% |
| ! | GTCTTGTTGTAGCAGGATGT+TGG | + | chr8.2:5157069-5157088 | MS.gene018379:CDS | 45.0% |
| ! | TGTTCACCTTGAGAGTATGC+TGG | + | chr8.2:5158577-5158596 | MS.gene018379:CDS | 45.0% |
| !! | AGGGAAGGTTCTGATTTTGG+GGG | + | chr8.2:5157255-5157274 | MS.gene018379:CDS | 45.0% |
| !! | GGCATTGAGGAATCTTTTGG+AGG | + | chr8.2:5157321-5157340 | MS.gene018379:CDS | 45.0% |
| !! | GTCCTCTGAAACAGCTAAGA+GGG | + | chr8.2:5157207-5157226 | MS.gene018379:CDS | 45.0% |
| !! | TGGTGCCATCATAGTCCAAA+AGG | - | chr8.2:5158047-5158066 | None:intergenic | 45.0% |
| !!! | GATTTTGGGGGTTGATGACT+TGG | + | chr8.2:5157267-5157286 | MS.gene018379:CDS | 45.0% |
| ATTGGACAAAGCCCTTGGAG+TGG | + | chr8.2:5157642-5157661 | MS.gene018379:CDS | 50.0% | |
| CAAAACCTCGCGAACCTTGT+CGG | - | chr8.2:5156825-5156844 | None:intergenic | 50.0% | |
| CATTGGCCAGCATACTCTCA+AGG | - | chr8.2:5158586-5158605 | None:intergenic | 50.0% | |
| CCACCTGCCATCAGTCAAAA+AGG | - | chr8.2:5158366-5158385 | None:intergenic | 50.0% | |
| CCACTTGGGTCTTCTCGAAT+CGG | + | chr8.2:5157177-5157196 | MS.gene018379:CDS | 50.0% | |
| GAAATGCAGGGTGTGAGCAA+AGG | + | chr8.2:5158990-5159009 | MS.gene018379:intron | 50.0% | |
| GAGAGACCCAACTTGTCACA+TGG | - | chr8.2:5158207-5158226 | None:intergenic | 50.0% | |
| GATTCTCCTTGGACGACTCT+CGG | + | chr8.2:5158392-5158411 | MS.gene018379:CDS | 50.0% | |
| GCTCTCATGACGTAGCGTAT+TGG | + | chr8.2:5157851-5157870 | MS.gene018379:CDS | 50.0% | |
| GCTTGCCACAGTCCAAAATC+AGG | - | chr8.2:5158545-5158564 | None:intergenic | 50.0% | |
| GGGTGTGAGCAAAGGTAAAG+TGG | + | chr8.2:5158998-5159017 | MS.gene018379:intron | 50.0% | |
| GGTGGAGTAAGGATTCTCCT+TGG | + | chr8.2:5158381-5158400 | MS.gene018379:intron | 50.0% | |
| GTAGAGTTTGCCTTAGCGAC+TGG | + | chr8.2:5158175-5158194 | MS.gene018379:CDS | 50.0% | |
| TTGGGTCTCTCTGCAGAACA+TGG | + | chr8.2:5158216-5158235 | MS.gene018379:CDS | 50.0% | |
| ! | CACCCTCTTAGCTGTTTCAG+AGG | - | chr8.2:5157212-5157231 | None:intergenic | 50.0% |
| !! | CCTTTTTGACTGATGGCAGG+TGG | + | chr8.2:5158363-5158382 | MS.gene018379:intron | 50.0% |
| !! | CGTCCTCTGAAACAGCTAAG+AGG | + | chr8.2:5157206-5157225 | MS.gene018379:CDS | 50.0% |
| AAACGGTCCGGTTTCGACTC+AGG | + | chr8.2:5157510-5157529 | MS.gene018379:CDS | 55.0% | |
| CTTCCTGTGGGGATCCACTT+GGG | + | chr8.2:5157163-5157182 | MS.gene018379:CDS | 55.0% | |
| GACTGATGGCAGGTGGAGTA+AGG | + | chr8.2:5158370-5158389 | MS.gene018379:intron | 55.0% | |
| GATGGCACCATGATGCCTCA+GGG | + | chr8.2:5158057-5158076 | MS.gene018379:CDS | 55.0% | |
| GCCTTCTCCTGAGTCGAAAC+CGG | - | chr8.2:5157520-5157539 | None:intergenic | 55.0% | |
| GGTTGTTCGCCTTCACTCAG+CGG | + | chr8.2:5157712-5157731 | MS.gene018379:CDS | 55.0% | |
| GTTGTTCGCCTTCACTCAGC+GGG | + | chr8.2:5157713-5157732 | MS.gene018379:CDS | 55.0% | |
| TCCGGTTTCGACTCAGGAGA+AGG | + | chr8.2:5157516-5157535 | MS.gene018379:CDS | 55.0% | |
| TCCTTGGACGACTCTCGGAT+TGG | + | chr8.2:5158397-5158416 | MS.gene018379:CDS | 55.0% | |
| TCTTCCTGTGGGGATCCACT+TGG | + | chr8.2:5157162-5157181 | MS.gene018379:CDS | 55.0% | |
| TGATGGCACCATGATGCCTC+AGG | + | chr8.2:5158056-5158075 | MS.gene018379:CDS | 55.0% | |
| TTGTTCGCCTTCACTCAGCG+GGG | + | chr8.2:5157714-5157733 | MS.gene018379:CDS | 55.0% | |
| ! | CCGATTCGAGAAGACCCAAG+TGG | - | chr8.2:5157180-5157199 | None:intergenic | 55.0% |
| AGACCCAAGTGGATCCCCAC+AGG | - | chr8.2:5157169-5157188 | None:intergenic | 60.0% | |
| CTTTGCCGACAAGGTTCGCG+AGG | + | chr8.2:5156817-5156836 | MS.gene018379:CDS | 60.0% | |
| GCCAATCCGAGAGTCGTCCA+AGG | - | chr8.2:5158401-5158420 | None:intergenic | 60.0% | |
| CTTCACTCAGCGGGGCGGTT+CGG | + | chr8.2:5157722-5157741 | MS.gene018379:CDS | 65.0% | |
| TTCACTCAGCGGGGCGGTTC+GGG | + | chr8.2:5157723-5157742 | MS.gene018379:CDS | 65.0% | |
| TTCGCCTTCACTCAGCGGGG+CGG | + | chr8.2:5157717-5157736 | MS.gene018379:CDS | 65.0% | |
| CGAACCGCCCCGCTGAGTGA+AGG | - | chr8.2:5157724-5157743 | None:intergenic | 70.0% | |
| ! | GGGCGGTTCGGGTGAATCCG+TGG | + | chr8.2:5157734-5157753 | MS.gene018379:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 5156371 | 5159277 | 5156371 | ID=MS.gene018379 |
| chr8.2 | mRNA | 5156371 | 5159277 | 5156371 | ID=MS.gene018379.t1;Parent=MS.gene018379 |
| chr8.2 | exon | 5156371 | 5158250 | 5156371 | ID=MS.gene018379.t1.exon1;Parent=MS.gene018379.t1 |
| chr8.2 | CDS | 5156371 | 5158250 | 5156371 | ID=cds.MS.gene018379.t1;Parent=MS.gene018379.t1 |
| chr8.2 | exon | 5158382 | 5158655 | 5158382 | ID=MS.gene018379.t1.exon2;Parent=MS.gene018379.t1 |
| chr8.2 | CDS | 5158382 | 5158655 | 5158382 | ID=cds.MS.gene018379.t1;Parent=MS.gene018379.t1 |
| chr8.2 | exon | 5158999 | 5159277 | 5158999 | ID=MS.gene018379.t1.exon3;Parent=MS.gene018379.t1 |
| chr8.2 | CDS | 5158999 | 5159277 | 5158999 | ID=cds.MS.gene018379.t1;Parent=MS.gene018379.t1 |
| Gene Sequence |
| Protein sequence |
