Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018958.t1 | XP_013443148.1 | 93.4 | 274 | 18 | 0 | 1 | 274 | 1 | 274 | 5.10E-136 | 493.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018958.t1 | Q9FJJ5 | 72.2 | 263 | 72 | 1 | 1 | 263 | 1 | 262 | 1.6e-101 | 370.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018958.t1 | A0A072TJV8 | 93.4 | 274 | 18 | 0 | 1 | 274 | 1 | 274 | 3.7e-136 | 493.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03589 | MS.gene018958 | PPI |
| MS.gene58445 | MS.gene018958 | PPI |
| MS.gene20245 | MS.gene018958 | PPI |
| MS.gene50990 | MS.gene018958 | PPI |
| MS.gene015202 | MS.gene018958 | PPI |
| MS.gene09543 | MS.gene018958 | PPI |
| MS.gene015206 | MS.gene018958 | PPI |
| MS.gene06926 | MS.gene018958 | PPI |
| MS.gene09540 | MS.gene018958 | PPI |
| MS.gene033134 | MS.gene018958 | PPI |
| MS.gene018958 | MS.gene06707 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018958.t1 | MTR_0036s0210 | 97.445 | 274 | 7 | 0 | 1 | 274 | 1 | 274 | 0.0 | 554 |
| MS.gene018958.t1 | MTR_4g108330 | 77.289 | 273 | 57 | 3 | 1 | 270 | 1 | 271 | 2.61e-155 | 434 |
| MS.gene018958.t1 | MTR_5g016520 | 58.333 | 288 | 87 | 7 | 1 | 267 | 1 | 276 | 7.40e-109 | 318 |
| MS.gene018958.t1 | MTR_2072s0010 | 92.308 | 52 | 4 | 0 | 37 | 88 | 1 | 52 | 3.16e-26 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018958.t1 | AT5G62500 | 74.621 | 264 | 64 | 2 | 1 | 263 | 1 | 262 | 1.66e-145 | 410 |
| MS.gene018958.t1 | AT3G47690 | 72.364 | 275 | 60 | 4 | 1 | 271 | 1 | 263 | 2.21e-142 | 401 |
| MS.gene018958.t1 | AT5G67270 | 55.720 | 271 | 102 | 5 | 1 | 256 | 1 | 268 | 4.09e-103 | 303 |
Find 58 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACGTCATGCTTCAGTTTC+TGG | 0.115731 | 3.1:+28493194 | None:intergenic |
| AGCCAACCTGAGTTTCTATT+TGG | 0.196968 | 3.1:+28494591 | None:intergenic |
| TCCCGTGGAGCGTAGGATTA+AGG | 0.235106 | 3.1:-28494703 | MS.gene018958:CDS |
| CGTTACTGTGATTCTGTTAA+TGG | 0.239870 | 3.1:-28494986 | MS.gene018958:CDS |
| GAAGTTAACAGGCTTGTTAA+AGG | 0.316943 | 3.1:-28495049 | MS.gene018958:CDS |
| TCTTTAAACTCTTAACATTT+CGG | 0.321327 | 3.1:+28494670 | None:intergenic |
| CCCGTGGAGCGTAGGATTAA+GGG | 0.337587 | 3.1:-28494702 | MS.gene018958:CDS |
| GGCAGCATATTGAAGTTAAC+AGG | 0.350762 | 3.1:-28495060 | MS.gene018958:intron |
| CAAAATCTCGGTGGATCTCT+TGG | 0.366236 | 3.1:-28494055 | MS.gene018958:CDS |
| CATTCTCCAGTTCTGATGTC+TGG | 0.371007 | 3.1:+28493980 | None:intergenic |
| TAATTCGTCAGCAGAGATTC+AGG | 0.371636 | 3.1:-28494456 | MS.gene018958:CDS |
| CCACTTGTCCTCGATATCTT+AGG | 0.375329 | 3.1:+28494494 | None:intergenic |
| ATTCATTGCTAGGCTGCATC+TGG | 0.385662 | 3.1:-28496592 | MS.gene018958:intron |
| TGCAAAAGAGTCGGCATTAG+AGG | 0.399645 | 3.1:-28493264 | MS.gene018958:CDS |
| GGCGACGAGTATAGGGATAA+TGG | 0.410039 | 3.1:-28497707 | MS.gene018958:CDS |
| TCAAACACTACGAATAATAC+TGG | 0.415660 | 3.1:-28494630 | MS.gene018958:CDS |
| GTCGGCATTAGAGGAAGCTC+AGG | 0.421605 | 3.1:-28493255 | MS.gene018958:CDS |
| ATGTTGGACATGACGTATCC+AGG | 0.425430 | 3.1:-28496553 | MS.gene018958:CDS |
| GCTTGTTAAAGGCCGACCTT+TGG | 0.439334 | 3.1:-28495038 | MS.gene018958:CDS |
| AGGCCGACCTTTGGACAACT+TGG | 0.450161 | 3.1:-28495029 | MS.gene018958:CDS |
| TTGTGCATTGGCACAACCCC+TGG | 0.459500 | 3.1:+28496535 | None:intergenic |
| TCAAAACTATAAAGTTCTAC+AGG | 0.481633 | 3.1:-28496383 | MS.gene018958:CDS |
| TCTATGCCAGACATCAGAAC+TGG | 0.488709 | 3.1:-28493986 | MS.gene018958:CDS |
| ACTACGAATAATACTGGTTC+AGG | 0.494201 | 3.1:-28494624 | MS.gene018958:CDS |
| AGGACAAGTGGAGGATCGGA+TGG | 0.497061 | 3.1:-28494482 | MS.gene018958:CDS |
| AGTAACGTTTCAGCCATTGT+AGG | 0.497462 | 3.1:+28495002 | None:intergenic |
| CCCTTAATCCTACGCTCCAC+GGG | 0.509614 | 3.1:+28494702 | None:intergenic |
| ATCGAGGACAAGTGGAGGAT+CGG | 0.524114 | 3.1:-28494486 | MS.gene018958:CDS |
| GGACAAGTGGAGGATCGGAT+GGG | 0.531287 | 3.1:-28494481 | MS.gene018958:CDS |
| GATTCAGGCCTTGTCCAAGC+AGG | 0.534074 | 3.1:-28494441 | MS.gene018958:intron |
| ACTATAATCCCGTGGAGCGT+AGG | 0.534515 | 3.1:-28494710 | MS.gene018958:CDS |
| TGTGTTGCTACCTTGTGCAT+TGG | 0.535818 | 3.1:+28496523 | None:intergenic |
| ACCCTTAATCCTACGCTCCA+CGG | 0.538190 | 3.1:+28494701 | None:intergenic |
| TTACATTAATCAAACATTGG+AGG | 0.542731 | 3.1:-28493231 | MS.gene018958:CDS |
| CTAAGTCCAAATAGAAACTC+AGG | 0.542973 | 3.1:-28494597 | MS.gene018958:intron |
| GGCTTACATTAATCAAACAT+TGG | 0.556676 | 3.1:-28493234 | MS.gene018958:CDS |
| GACAAGTGGAGGATCGGATG+GGG | 0.562896 | 3.1:-28494480 | MS.gene018958:CDS |
| TGTTGGACATGACGTATCCA+GGG | 0.567424 | 3.1:-28496552 | MS.gene018958:CDS |
| AAGTTGTACCTGCTTGGACA+AGG | 0.572645 | 3.1:+28494433 | None:intergenic |
| TGCTGTGCAATGTCAGATGT+TGG | 0.576648 | 3.1:-28496569 | MS.gene018958:CDS |
| TAATCTCTCTCGCATTGAAG+AGG | 0.585059 | 3.1:-28497623 | MS.gene018958:intron |
| GGTTACTGATCTCAAAATCT+CGG | 0.589120 | 3.1:-28494067 | MS.gene018958:CDS |
| CCTAAGATATCGAGGACAAG+TGG | 0.599988 | 3.1:-28494494 | MS.gene018958:CDS |
| GCGTAGGATTAAGGGTGGAA+AGG | 0.606069 | 3.1:-28494694 | MS.gene018958:CDS |
| GTAGAAATGAGATTCTGAGT+TGG | 0.610210 | 3.1:-28497666 | MS.gene018958:CDS |
| CAACAAGCTGAAAATTGCGA+AGG | 0.611532 | 3.1:-28496353 | MS.gene018958:intron |
| AGGGGTTGTGCCAATGCACA+AGG | 0.613823 | 3.1:-28496533 | MS.gene018958:intron |
| CTTTAGGAACTATAATCCCG+TGG | 0.638702 | 3.1:-28494718 | MS.gene018958:intron |
| ACTCCAAGTTGTCCAAAGGT+CGG | 0.639935 | 3.1:+28495026 | None:intergenic |
| TGCTGCTGATGCAAAAGAGT+CGG | 0.643139 | 3.1:-28493273 | MS.gene018958:CDS |
| TACTGATCTCAAAATCTCGG+TGG | 0.650709 | 3.1:-28494064 | MS.gene018958:CDS |
| AGGAACTCCAAGTTGTCCAA+AGG | 0.653402 | 3.1:+28495022 | None:intergenic |
| TACTGTGATTCTGTTAATGG+TGG | 0.661559 | 3.1:-28494983 | MS.gene018958:CDS |
| ACAACTTGGAGTTCCTACAA+TGG | 0.679808 | 3.1:-28495015 | MS.gene018958:CDS |
| GTGGAGCGTAGGATTAAGGG+TGG | 0.682025 | 3.1:-28494699 | MS.gene018958:CDS |
| GTGTAGGACCTAAGATATCG+AGG | 0.685097 | 3.1:-28494502 | MS.gene018958:intron |
| AAGATATCGAGGACAAGTGG+AGG | 0.685573 | 3.1:-28494491 | MS.gene018958:CDS |
| GTTGGACATGACGTATCCAG+GGG | 0.722458 | 3.1:-28496551 | MS.gene018958:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATAAAGATATATAAT+TGG | + | chr3.1:28495196-28495215 | None:intergenic | 10.0% |
| !! | AAACATAAAGATATATAATT+GGG | + | chr3.1:28495195-28495214 | None:intergenic | 10.0% |
| !! | ATATAAAAATTTACAACTTA+AGG | + | chr3.1:28497240-28497259 | None:intergenic | 10.0% |
| !! | TATAAAAATTTACAACTTAA+GGG | + | chr3.1:28497239-28497258 | None:intergenic | 10.0% |
| !!! | AAGTAAAAGTAATTTATTTT+CGG | - | chr3.1:28495718-28495737 | MS.gene018958:intron | 10.0% |
| !!! | GTAAATTTTTATATTTCTTT+AGG | - | chr3.1:28497246-28497265 | MS.gene018958:intron | 10.0% |
| !! | AACATAAAGATATATAATTG+GGG | + | chr3.1:28495194-28495213 | None:intergenic | 15.0% |
| !! | TAAAGGTTAATTTATTAACT+TGG | - | chr3.1:28494710-28494729 | MS.gene018958:CDS | 15.0% |
| !! | TTCTACAATTAAATAGTTTA+CGG | + | chr3.1:28494908-28494927 | None:intergenic | 15.0% |
| !!! | AAAATGAATTTAGAACATAT+GGG | - | chr3.1:28497501-28497520 | MS.gene018958:intron | 15.0% |
| !!! | ACAAATAATTTTGAAATTTG+GGG | - | chr3.1:28494457-28494476 | MS.gene018958:CDS | 15.0% |
| !!! | AGGTTAATTTGTTTTTAAAA+CGG | - | chr3.1:28494237-28494256 | MS.gene018958:intron | 15.0% |
| !!! | AGTAAAAGTAATTTATTTTC+GGG | - | chr3.1:28495719-28495738 | MS.gene018958:intron | 15.0% |
| !!! | GACAAATAATTTTGAAATTT+GGG | - | chr3.1:28494456-28494475 | MS.gene018958:CDS | 15.0% |
| !!! | TGACAAATAATTTTGAAATT+TGG | - | chr3.1:28494455-28494474 | MS.gene018958:CDS | 15.0% |
| !!! | TTTCTAAAAATATTTTGTTC+TGG | - | chr3.1:28497149-28497168 | MS.gene018958:intron | 15.0% |
| !!! | TTTTACTTTTAAAAAATGAG+AGG | - | chr3.1:28496996-28497015 | MS.gene018958:intron | 15.0% |
| !!! | TTTTTTTCTTTTTGAAAACT+CGG | + | chr3.1:28493626-28493645 | None:intergenic | 15.0% |
| !! | AGAAATCAATTCAAAAACAA+TGG | + | chr3.1:28494217-28494236 | None:intergenic | 20.0% |
| !! | AGTAACAATGAACAAAAAAA+AGG | + | chr3.1:28496803-28496822 | None:intergenic | 20.0% |
| !! | ATATTCAATGATATAGATTC+AGG | - | chr3.1:28493762-28493781 | MS.gene018958:intron | 20.0% |
| !! | CATGTACATTTCAATATTTA+AGG | - | chr3.1:28495135-28495154 | MS.gene018958:intron | 20.0% |
| !! | GTTTCTCTTTAAATATGATA+TGG | - | chr3.1:28497345-28497364 | MS.gene018958:intron | 20.0% |
| !! | TAATAAAAGTAGTATGCATT+TGG | - | chr3.1:28493866-28493885 | MS.gene018958:intron | 20.0% |
| !! | TATGAAATAGTATCTTTATC+AGG | - | chr3.1:28494672-28494691 | MS.gene018958:CDS | 20.0% |
| !! | TATTCAATGATATAGATTCA+GGG | - | chr3.1:28493763-28493782 | MS.gene018958:intron | 20.0% |
| !! | TATTTAATTGTAGAAGCTTA+TGG | - | chr3.1:28494913-28494932 | MS.gene018958:intron | 20.0% |
| !! | TCTACAATCAAATAGTTTAT+GGG | + | chr3.1:28494970-28494989 | None:intergenic | 20.0% |
| !! | TCTTTAAACTCTTAACATTT+CGG | + | chr3.1:28496241-28496260 | None:intergenic | 20.0% |
| !! | TTCTACAATCAAATAGTTTA+TGG | + | chr3.1:28494971-28494990 | None:intergenic | 20.0% |
| !!! | AAAAGCACATTAATTAAAAC+GGG | + | chr3.1:28496384-28496403 | None:intergenic | 20.0% |
| !!! | AAATGAATTTAGAACATATG+GGG | - | chr3.1:28497502-28497521 | MS.gene018958:intron | 20.0% |
| !!! | AATCAAGTTGATTAAATGAT+AGG | + | chr3.1:28495988-28496007 | None:intergenic | 20.0% |
| !!! | ACTTTTACTTTTCAAAACTA+CGG | - | chr3.1:28496888-28496907 | MS.gene018958:intron | 20.0% |
| !!! | ATTTTGAATTTGATTCAATC+TGG | - | chr3.1:28493828-28493847 | MS.gene018958:intron | 20.0% |
| !!! | CAAAAGCACATTAATTAAAA+CGG | + | chr3.1:28496385-28496404 | None:intergenic | 20.0% |
| !!! | GAAAATGAATTTAGAACATA+TGG | - | chr3.1:28497500-28497519 | MS.gene018958:intron | 20.0% |
| !!! | GGTTAATTTGTTTTTAAAAC+GGG | - | chr3.1:28494238-28494257 | MS.gene018958:intron | 20.0% |
| !!! | GTTAATTTGTTTTTAAAACG+GGG | - | chr3.1:28494239-28494258 | MS.gene018958:intron | 20.0% |
| !!! | TTATATTTTTTTTGACTTCG+TGG | - | chr3.1:28493435-28493454 | MS.gene018958:intron | 20.0% |
| !!! | TTGTTTTTGAATTGATTTCT+AGG | - | chr3.1:28494217-28494236 | MS.gene018958:intron | 20.0% |
| !!! | TTTTTATATTTCTTTAGGCA+AGG | - | chr3.1:28497251-28497270 | MS.gene018958:intron | 20.0% |
| !!! | TTTTTTAGGGTTATTTCTTT+AGG | - | chr3.1:28495235-28495254 | MS.gene018958:intron | 20.0% |
| ! | AACATGAGAACATATATACA+TGG | + | chr3.1:28496136-28496155 | None:intergenic | 25.0% |
| ! | AATACAAAATCCTCCTAATT+TGG | - | chr3.1:28495375-28495394 | MS.gene018958:intron | 25.0% |
| ! | ACTGGTATATGAAAATACTT+TGG | - | chr3.1:28495766-28495785 | MS.gene018958:intron | 25.0% |
| ! | ATACAAAATCCTCCTAATTT+GGG | - | chr3.1:28495376-28495395 | MS.gene018958:intron | 25.0% |
| ! | ATATCATTAACAATAAGAGC+TGG | + | chr3.1:28494158-28494177 | None:intergenic | 25.0% |
| ! | ATATTGTTAGGTTTAGTGTA+TGG | - | chr3.1:28497198-28497217 | MS.gene018958:intron | 25.0% |
| ! | ATTGAAATGTACATGAACAA+AGG | + | chr3.1:28495130-28495149 | None:intergenic | 25.0% |
| ! | CAACTTATTAGGAATATTAC+AGG | + | chr3.1:28494809-28494828 | None:intergenic | 25.0% |
| ! | CTACAATCAAATAGTTTATG+GGG | + | chr3.1:28494969-28494988 | None:intergenic | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr3.1:28495400-28495419 | MS.gene018958:intron | 25.0% |
| ! | GAGCTAAAATAATGTGTATT+TGG | + | chr3.1:28493926-28493945 | None:intergenic | 25.0% |
| ! | GCATGTGTTAATAATCAAAT+AGG | - | chr3.1:28497447-28497466 | MS.gene018958:intron | 25.0% |
| ! | GTATTAGTGAAAATATGCAT+TGG | + | chr3.1:28496094-28496113 | None:intergenic | 25.0% |
| ! | TAAGCTCAAAACAACTTATT+AGG | + | chr3.1:28494820-28494839 | None:intergenic | 25.0% |
| ! | TATTGTTAGGTTTAGTGTAT+GGG | - | chr3.1:28497199-28497218 | MS.gene018958:intron | 25.0% |
| ! | TATTTCGGTAAAAATTGTCT+TGG | - | chr3.1:28494037-28494056 | MS.gene018958:CDS | 25.0% |
| ! | TCAAAACTATAAAGTTCTAC+AGG | - | chr3.1:28494525-28494544 | MS.gene018958:intron | 25.0% |
| ! | TCAATTACCTACTAATCTAT+TGG | - | chr3.1:28496720-28496739 | MS.gene018958:intron | 25.0% |
| ! | TCATTGAAGAAAAGAAATGA+GGG | + | chr3.1:28493342-28493361 | None:intergenic | 25.0% |
| ! | TGTTCTGCTTAAAATTTAGA+GGG | + | chr3.1:28494593-28494612 | None:intergenic | 25.0% |
| ! | TTACATTAATCAAACATTGG+AGG | - | chr3.1:28497677-28497696 | MS.gene018958:CDS | 25.0% |
| ! | TTGAAATGTACATGAACAAA+GGG | + | chr3.1:28495129-28495148 | None:intergenic | 25.0% |
| ! | TTTGATTATTAACACATGCA+TGG | + | chr3.1:28497446-28497465 | None:intergenic | 25.0% |
| !! | AAGTTGATTAAATGATAGGA+AGG | + | chr3.1:28495984-28496003 | None:intergenic | 25.0% |
| !! | ATTTTTACCGAAATAAGAGA+AGG | + | chr3.1:28494032-28494051 | None:intergenic | 25.0% |
| !! | CTTAACTTGAGAATAAAAAC+TGG | - | chr3.1:28495748-28495767 | MS.gene018958:intron | 25.0% |
| !! | TAAATTTTAAGCAGAACACT+TGG | - | chr3.1:28494595-28494614 | MS.gene018958:intron | 25.0% |
| !! | TATGTACTATATTTTCAGCT+GGG | + | chr3.1:28496565-28496584 | None:intergenic | 25.0% |
| !!! | ACATAGTTTTTGAGACAATT+TGG | - | chr3.1:28494103-28494122 | MS.gene018958:intron | 25.0% |
| !!! | ATGTTACTTTTTGCAGATAT+CGG | - | chr3.1:28497590-28497609 | MS.gene018958:intron | 25.0% |
| !!! | CTTTTACTTTTCAAAACTAC+GGG | - | chr3.1:28496889-28496908 | MS.gene018958:intron | 25.0% |
| !!! | TATCTTTATGTTTTTGTCAC+TGG | - | chr3.1:28495202-28495221 | MS.gene018958:intron | 25.0% |
| AAAAATCTTACCCATGTTTC+TGG | - | chr3.1:28493795-28493814 | MS.gene018958:intron | 30.0% | |
| AAAAGACATGCAATTGATGA+AGG | + | chr3.1:28495672-28495691 | None:intergenic | 30.0% | |
| AAAAGATTTGATGGAGTACA+AGG | - | chr3.1:28495579-28495598 | MS.gene018958:intron | 30.0% | |
| AAATGACTCTTTGTATGGTT+TGG | - | chr3.1:28497276-28497295 | MS.gene018958:intron | 30.0% | |
| AATACAATTGCCAGAAACAT+GGG | + | chr3.1:28493808-28493827 | None:intergenic | 30.0% | |
| ACAAGAACCAATAGATTAGT+AGG | + | chr3.1:28496730-28496749 | None:intergenic | 30.0% | |
| ATAATTGGGGAAGAGTAAAA+GGG | + | chr3.1:28495181-28495200 | None:intergenic | 30.0% | |
| ATACAATTTCAAGAAACGCA+GGG | + | chr3.1:28497380-28497399 | None:intergenic | 30.0% | |
| ATGCAGATCAAATAATTCCT+AGG | + | chr3.1:28493699-28493718 | None:intergenic | 30.0% | |
| CAAGAAGAAATTTCACATTC+TGG | + | chr3.1:28495698-28495717 | None:intergenic | 30.0% | |
| CATTGAAGAAAAGAAATGAG+GGG | + | chr3.1:28493341-28493360 | None:intergenic | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | - | chr3.1:28495403-28495422 | MS.gene018958:intron | 30.0% | |
| CTCATTGAAGAAAAGAAATG+AGG | + | chr3.1:28493343-28493362 | None:intergenic | 30.0% | |
| GAAATTGTATATGCTTGCTT+TGG | - | chr3.1:28497390-28497409 | MS.gene018958:intron | 30.0% | |
| GCAAATGAAATATCAGAAGA+GGG | + | chr3.1:28494434-28494453 | None:intergenic | 30.0% | |
| GGATCTAGAAATGCTAATAA+AGG | - | chr3.1:28494693-28494712 | MS.gene018958:CDS | 30.0% | |
| GGCTTACATTAATCAAACAT+TGG | - | chr3.1:28497674-28497693 | MS.gene018958:CDS | 30.0% | |
| GGGGAACTAAAAAATTGTAT+TGG | - | chr3.1:28495397-28495416 | MS.gene018958:intron | 30.0% | |
| GTGTTCTGCTTAAAATTTAG+AGG | + | chr3.1:28494594-28494613 | None:intergenic | 30.0% | |
| TAAAAGTAGTATGCATTTGG+CGG | - | chr3.1:28493869-28493888 | MS.gene018958:intron | 30.0% | |
| TAATACAATTGCCAGAAACA+TGG | + | chr3.1:28493809-28493828 | None:intergenic | 30.0% | |
| TACAAAATCCTCCTAATTTG+GGG | - | chr3.1:28495377-28495396 | MS.gene018958:intron | 30.0% | |
| TACTTTCTCTCAATAGTCAT+GGG | + | chr3.1:28496598-28496617 | None:intergenic | 30.0% | |
| TATAATTGGGGAAGAGTAAA+AGG | + | chr3.1:28495182-28495201 | None:intergenic | 30.0% | |
| TATACAATTTCAAGAAACGC+AGG | + | chr3.1:28497381-28497400 | None:intergenic | 30.0% | |
| TATGACATATGCACTTGTAT+TGG | - | chr3.1:28494759-28494778 | MS.gene018958:intron | 30.0% | |
| TCAAACACTACGAATAATAC+TGG | - | chr3.1:28496278-28496297 | MS.gene018958:intron | 30.0% | |
| TCCATAATCGAAGAGTTTAT+GGG | + | chr3.1:28495036-28495055 | None:intergenic | 30.0% | |
| TCCTAAAGGGAAAATAAGAA+GGG | + | chr3.1:28496178-28496197 | None:intergenic | 30.0% | |
| TGAAATGTACATGAACAAAG+GGG | + | chr3.1:28495128-28495147 | None:intergenic | 30.0% | |
| TGAGACAATTTGGATAGTTA+AGG | - | chr3.1:28494113-28494132 | MS.gene018958:intron | 30.0% | |
| TGCAAATGAAATATCAGAAG+AGG | + | chr3.1:28494435-28494454 | None:intergenic | 30.0% | |
| TGCAGATCAAATAATTCCTA+GGG | + | chr3.1:28493698-28493717 | None:intergenic | 30.0% | |
| TGTTTCCATATGCTATCTTA+AGG | + | chr3.1:28494855-28494874 | None:intergenic | 30.0% | |
| TTACTTTCTCTCAATAGTCA+TGG | + | chr3.1:28496599-28496618 | None:intergenic | 30.0% | |
| TTCCTAAAGGGAAAATAAGA+AGG | + | chr3.1:28496179-28496198 | None:intergenic | 30.0% | |
| TTGGTTCCATTCATGAATTT+GGG | - | chr3.1:28494729-28494748 | MS.gene018958:intron | 30.0% | |
| ! | ATAGATGACTTTGAGAGAAA+AGG | - | chr3.1:28495327-28495346 | MS.gene018958:intron | 30.0% |
| ! | ATAGGGGGAAAAAAGAATTT+TGG | + | chr3.1:28495483-28495502 | None:intergenic | 30.0% |
| ! | CTATGTACTATATTTTCAGC+TGG | + | chr3.1:28496566-28496585 | None:intergenic | 30.0% |
| ! | TAGATGACTTTGAGAGAAAA+GGG | - | chr3.1:28495328-28495347 | MS.gene018958:intron | 30.0% |
| ! | TAGGGGGAAAAAAGAATTTT+GGG | + | chr3.1:28495482-28495501 | None:intergenic | 30.0% |
| !! | AATGTGTATTTGGTCTTAGT+TGG | + | chr3.1:28493916-28493935 | None:intergenic | 30.0% |
| !! | ATTAATGTGCTTTTGAGTGT+AGG | - | chr3.1:28496390-28496409 | MS.gene018958:CDS | 30.0% |
| !! | TCGAAGGTATTAGAACATTT+AGG | + | chr3.1:28497117-28497136 | None:intergenic | 30.0% |
| !!! | TGATCTGCATGTTGATTTTT+GGG | - | chr3.1:28493709-28493728 | MS.gene018958:intron | 30.0% |
| !!! | TTGATCTGCATGTTGATTTT+TGG | - | chr3.1:28493708-28493727 | MS.gene018958:intron | 30.0% |
| !!! | TTTTTTAGTTCCCCCAAATT+AGG | + | chr3.1:28495391-28495410 | None:intergenic | 30.0% |
| ACAAAATCCTCCTAATTTGG+GGG | - | chr3.1:28495378-28495397 | MS.gene018958:intron | 35.0% | |
| ACCCATAAACTCTTCGATTA+TGG | - | chr3.1:28495032-28495051 | MS.gene018958:CDS | 35.0% | |
| ACGGGATTATAGTTCCTAAA+GGG | + | chr3.1:28496191-28496210 | None:intergenic | 35.0% | |
| AGGAGAAATGACTCTTTGTA+TGG | - | chr3.1:28497271-28497290 | MS.gene018958:intron | 35.0% | |
| CAAGATACTTTCTACCACAA+CGG | + | chr3.1:28494078-28494097 | None:intergenic | 35.0% | |
| CATAGAAGTAGACATGATCA+CGG | + | chr3.1:28497035-28497054 | None:intergenic | 35.0% | |
| CGTTACTGTGATTCTGTTAA+TGG | - | chr3.1:28495922-28495941 | MS.gene018958:intron | 35.0% | |
| CTAAGTCCAAATAGAAACTC+AGG | - | chr3.1:28496311-28496330 | MS.gene018958:intron | 35.0% | |
| CTTGGTTCCATTCATGAATT+TGG | - | chr3.1:28494728-28494747 | MS.gene018958:intron | 35.0% | |
| GAGCTAATTTGATTACCATG+TGG | - | chr3.1:28495827-28495846 | MS.gene018958:intron | 35.0% | |
| GATAAGCCCAAATTCATGAA+TGG | + | chr3.1:28494738-28494757 | None:intergenic | 35.0% | |
| GATTGAGACAATGAAAACAC+AGG | + | chr3.1:28496700-28496719 | None:intergenic | 35.0% | |
| GGTTACTGATCTCAAAATCT+CGG | - | chr3.1:28496841-28496860 | MS.gene018958:intron | 35.0% | |
| GTAGAAATGAGATTCTGAGT+TGG | - | chr3.1:28493242-28493261 | MS.gene018958:CDS | 35.0% | |
| GTCCATAATCGAAGAGTTTA+TGG | + | chr3.1:28495037-28495056 | None:intergenic | 35.0% | |
| GTGTTGGGTCAATTCATATA+GGG | - | chr3.1:28493525-28493544 | MS.gene018958:intron | 35.0% | |
| TACAATTTCAAGAAACGCAG+GGG | + | chr3.1:28497379-28497398 | None:intergenic | 35.0% | |
| TACTGTGATTCTGTTAATGG+TGG | - | chr3.1:28495925-28495944 | MS.gene018958:intron | 35.0% | |
| TAGGTTTAGTGTATGGGATA+AGG | - | chr3.1:28497205-28497224 | MS.gene018958:intron | 35.0% | |
| TGTGTTGGGTCAATTCATAT+AGG | - | chr3.1:28493524-28493543 | MS.gene018958:intron | 35.0% | |
| TTCTTCACACATTATCAAGC+TGG | + | chr3.1:28497422-28497441 | None:intergenic | 35.0% | |
| ! | AAGCAAGCCTTCTCTTATTT+CGG | - | chr3.1:28494022-28494041 | MS.gene018958:CDS | 35.0% |
| ! | AGGGGGAAAAAAGAATTTTG+GGG | + | chr3.1:28495481-28495500 | None:intergenic | 35.0% |
| ! | AGTCAATAGTTTTTCCGTTG+TGG | - | chr3.1:28494061-28494080 | MS.gene018958:CDS | 35.0% |
| ! | ATGGATAGCGCATATTTTGT+CGG | - | chr3.1:28493220-28493239 | MS.gene018958:CDS | 35.0% |
| ! | ATTGTATTGGAGGAGGATTT+TGG | - | chr3.1:28495410-28495429 | MS.gene018958:intron | 35.0% |
| ! | GCAGGTACAACTTTGAAAAT+AGG | - | chr3.1:28496485-28496504 | MS.gene018958:intron | 35.0% |
| ! | TACCTCTACATCTGACATTT+TGG | - | chr3.1:28497321-28497340 | MS.gene018958:intron | 35.0% |
| ! | TATGCACTTGTATTGGTGTT+TGG | - | chr3.1:28494766-28494785 | MS.gene018958:intron | 35.0% |
| ! | TCCATCAAATCTTTTACGCA+GGG | + | chr3.1:28495574-28495593 | None:intergenic | 35.0% |
| ! | TTTTCAAAGTTGTACCTGCT+TGG | + | chr3.1:28496484-28496503 | None:intergenic | 35.0% |
| !! | ACTACGAATAATACTGGTTC+AGG | - | chr3.1:28496284-28496303 | MS.gene018958:intron | 35.0% |
| !! | GAAGTTAACAGGCTTGTTAA+AGG | - | chr3.1:28495859-28495878 | MS.gene018958:intron | 35.0% |
| !! | TGAAATTTGGGGTTCGTTTT+AGG | - | chr3.1:28494468-28494487 | MS.gene018958:CDS | 35.0% |
| !! | TTTTGGGGGTCGAAAATATA+GGG | + | chr3.1:28495500-28495519 | None:intergenic | 35.0% |
| !!! | ACCCTTCTTATTTTCCCTTT+AGG | - | chr3.1:28496174-28496193 | MS.gene018958:intron | 35.0% |
| !!! | ACTTCGCTTTTTTGTTTCAC+AGG | - | chr3.1:28496820-28496839 | MS.gene018958:intron | 35.0% |
| !!! | ATTTTTGGGTGTTCACATTG+TGG | - | chr3.1:28493723-28493742 | MS.gene018958:intron | 35.0% |
| !!! | TGGTAGACTGCAGTTTTTTA+GGG | - | chr3.1:28495222-28495241 | MS.gene018958:intron | 35.0% |
| AAATTCCCAAACAGACCCTT+AGG | - | chr3.1:28495536-28495555 | MS.gene018958:intron | 40.0% | |
| AACACATGAATTGTCAGGAC+CGG | + | chr3.1:28493510-28493529 | None:intergenic | 40.0% | |
| AACTTCAATATGCTGCCACA+TGG | + | chr3.1:28495845-28495864 | None:intergenic | 40.0% | |
| ACAACTTGGAGTTCCTACAA+TGG | - | chr3.1:28495893-28495912 | MS.gene018958:intron | 40.0% | |
| ACAATCAATTTCGAGAGGCT+AGG | + | chr3.1:28493997-28494016 | None:intergenic | 40.0% | |
| ACAATTTCAAGAAACGCAGG+GGG | + | chr3.1:28497378-28497397 | None:intergenic | 40.0% | |
| ACAGGCATGTATATGCTATC+AGG | + | chr3.1:28496682-28496701 | None:intergenic | 40.0% | |
| ACCCTGCGTAAAAGATTTGA+TGG | - | chr3.1:28495570-28495589 | MS.gene018958:intron | 40.0% | |
| ACCTGTAAGAATTCCAGCAA+AGG | - | chr3.1:28496952-28496971 | MS.gene018958:intron | 40.0% | |
| AGCCAACCTGAGTTTCTATT+TGG | + | chr3.1:28496320-28496339 | None:intergenic | 40.0% | |
| AGTAACGTTTCAGCCATTGT+AGG | + | chr3.1:28495909-28495928 | None:intergenic | 40.0% | |
| ATGAACACAGGGCATAAGAA+TGG | + | chr3.1:28494298-28494317 | None:intergenic | 40.0% | |
| CAACAAGCTGAAAATTGCGA+AGG | - | chr3.1:28494555-28494574 | MS.gene018958:intron | 40.0% | |
| CACACATTATCAAGCTGGAT+CGG | + | chr3.1:28497417-28497436 | None:intergenic | 40.0% | |
| CACCAAAATGTCAGATGTAG+AGG | + | chr3.1:28497326-28497345 | None:intergenic | 40.0% | |
| CACGGGATTATAGTTCCTAA+AGG | + | chr3.1:28496192-28496211 | None:intergenic | 40.0% | |
| CATTTGATATGTCTCACCCT+AGG | - | chr3.1:28493679-28493698 | MS.gene018958:intron | 40.0% | |
| CCACAACAATCAATTTCGAG+AGG | + | chr3.1:28494002-28494021 | None:intergenic | 40.0% | |
| CCTAGCAATGAATGAACACA+GGG | + | chr3.1:28494309-28494328 | None:intergenic | 40.0% | |
| CCTCTCGAAATTGATTGTTG+TGG | - | chr3.1:28493999-28494018 | MS.gene018958:CDS | 40.0% | |
| CTAGGGTGAGACATATCAAA+TGG | + | chr3.1:28493681-28493700 | None:intergenic | 40.0% | |
| GACATGCAATTGATGAAGGT+AGG | + | chr3.1:28495668-28495687 | None:intergenic | 40.0% | |
| GATGTAGAGGTAGAAAACAC+AGG | + | chr3.1:28497313-28497332 | None:intergenic | 40.0% | |
| GGCAGCATATTGAAGTTAAC+AGG | - | chr3.1:28495848-28495867 | MS.gene018958:intron | 40.0% | |
| GTCCAAATAGAAACTCAGGT+TGG | - | chr3.1:28496315-28496334 | MS.gene018958:intron | 40.0% | |
| GTCCTGACAATTCATGTGTT+GGG | - | chr3.1:28493510-28493529 | MS.gene018958:intron | 40.0% | |
| GTGCTCCTTAAGATAGCATA+TGG | - | chr3.1:28494847-28494866 | MS.gene018958:intron | 40.0% | |
| TAAGGGTCTGTTTGGGAATT+TGG | + | chr3.1:28495537-28495556 | None:intergenic | 40.0% | |
| TAATCTCTCTCGCATTGAAG+AGG | - | chr3.1:28493285-28493304 | MS.gene018958:CDS | 40.0% | |
| TAATTCGTCAGCAGAGATTC+AGG | - | chr3.1:28496452-28496471 | MS.gene018958:intron | 40.0% | |
| TACTGATCTCAAAATCTCGG+TGG | - | chr3.1:28496844-28496863 | MS.gene018958:intron | 40.0% | |
| TCAATAGTCATGGGCTTCTT+TGG | + | chr3.1:28496589-28496608 | None:intergenic | 40.0% | |
| TGAAGAAAAGAAATGAGGGG+AGG | + | chr3.1:28493338-28493357 | None:intergenic | 40.0% | |
| TTCTAATACCTTCGATCGTC+TGG | - | chr3.1:28497122-28497141 | MS.gene018958:intron | 40.0% | |
| TTGATGAAGGTAGGATAGCA+TGG | + | chr3.1:28495659-28495678 | None:intergenic | 40.0% | |
| TTTGAGAGAAAAGGGCTTTG+GGG | - | chr3.1:28495336-28495355 | MS.gene018958:intron | 40.0% | |
| TTTGATGGAGTACAAGGTTG+CGG | - | chr3.1:28495585-28495604 | MS.gene018958:intron | 40.0% | |
| TTTGGGGGTCGAAAATATAG+GGG | + | chr3.1:28495499-28495518 | None:intergenic | 40.0% | |
| ! | ACTTTGAGAGAAAAGGGCTT+TGG | - | chr3.1:28495334-28495353 | MS.gene018958:intron | 40.0% |
| ! | CTCCATCAAATCTTTTACGC+AGG | + | chr3.1:28495575-28495594 | None:intergenic | 40.0% |
| ! | CTTTAGGAACTATAATCCCG+TGG | - | chr3.1:28496190-28496209 | MS.gene018958:intron | 40.0% |
| ! | CTTTGAGAGAAAAGGGCTTT+GGG | - | chr3.1:28495335-28495354 | MS.gene018958:intron | 40.0% |
| ! | TATTGGAGGAGGATTTTGGA+GGG | - | chr3.1:28495414-28495433 | MS.gene018958:intron | 40.0% |
| ! | TTAGGCTTTGTCTGTGAGTT+TGG | - | chr3.1:28495253-28495272 | MS.gene018958:intron | 40.0% |
| ! | TTTAGTTCCCCCAAATTAGG+AGG | + | chr3.1:28495388-28495407 | None:intergenic | 40.0% |
| !!! | CTGGTAGACTGCAGTTTTTT+AGG | - | chr3.1:28495221-28495240 | MS.gene018958:intron | 40.0% |
| !!! | GTTTTGGGGGTCGAAAATAT+AGG | + | chr3.1:28495501-28495520 | None:intergenic | 40.0% |
| AAGATATCGAGGACAAGTGG+AGG | - | chr3.1:28496417-28496436 | MS.gene018958:CDS | 45.0% | |
| AAGTTGTACCTGCTTGGACA+AGG | + | chr3.1:28496478-28496497 | None:intergenic | 45.0% | |
| ACTCCAAGTTGTCCAAAGGT+CGG | + | chr3.1:28495885-28495904 | None:intergenic | 45.0% | |
| AGGAACTCCAAGTTGTCCAA+AGG | + | chr3.1:28495889-28495908 | None:intergenic | 45.0% | |
| AGTAGACATGATCACGGTCA+AGG | + | chr3.1:28497029-28497048 | None:intergenic | 45.0% | |
| ATGCAGTACTCTTAGAAGCG+TGG | - | chr3.1:28497530-28497549 | MS.gene018958:intron | 45.0% | |
| ATGTTGGACATGACGTATCC+AGG | - | chr3.1:28494355-28494374 | MS.gene018958:intron | 45.0% | |
| ATTCATTGCTAGGCTGCATC+TGG | - | chr3.1:28494316-28494335 | MS.gene018958:intron | 45.0% | |
| CAAAATCTCGGTGGATCTCT+TGG | - | chr3.1:28496853-28496872 | MS.gene018958:intron | 45.0% | |
| CCACTTGTCCTCGATATCTT+AGG | + | chr3.1:28496417-28496436 | None:intergenic | 45.0% | |
| CCCTGTGTTCATTCATTGCT+AGG | - | chr3.1:28494306-28494325 | MS.gene018958:intron | 45.0% | |
| CCTAAGATATCGAGGACAAG+TGG | - | chr3.1:28496414-28496433 | MS.gene018958:CDS | 45.0% | |
| CTTTGTCTGTGAGTTTGGAG+GGG | - | chr3.1:28495258-28495277 | MS.gene018958:intron | 45.0% | |
| GACCCAACACATGAATTGTC+AGG | + | chr3.1:28493515-28493534 | None:intergenic | 45.0% | |
| GCCTAGCAATGAATGAACAC+AGG | + | chr3.1:28494310-28494329 | None:intergenic | 45.0% | |
| GCCTTTGCTGGAATTCTTAC+AGG | + | chr3.1:28496956-28496975 | None:intergenic | 45.0% | |
| GCTTTGTCTGTGAGTTTGGA+GGG | - | chr3.1:28495257-28495276 | MS.gene018958:intron | 45.0% | |
| GGGAAACAGGAATGAACAAG+TGG | - | chr3.1:28495299-28495318 | MS.gene018958:intron | 45.0% | |
| GGGGATAAACTCATAAGCTC+TGG | + | chr3.1:28494950-28494969 | None:intergenic | 45.0% | |
| GGTCCTGACAATTCATGTGT+TGG | - | chr3.1:28493509-28493528 | MS.gene018958:intron | 45.0% | |
| GGTCTGTTTGGGAATTTGGA+GGG | + | chr3.1:28495533-28495552 | None:intergenic | 45.0% | |
| GTACATGAACAAAGGGGCTT+TGG | + | chr3.1:28495122-28495141 | None:intergenic | 45.0% | |
| GTCTCAGGTTCGAATTCTTC+CGG | - | chr3.1:28493488-28493507 | MS.gene018958:intron | 45.0% | |
| GTCTGTTTGGGAATTTGGAG+GGG | + | chr3.1:28495532-28495551 | None:intergenic | 45.0% | |
| GTGTAGGACCTAAGATATCG+AGG | - | chr3.1:28496406-28496425 | MS.gene018958:CDS | 45.0% | |
| TCTATGCCAGACATCAGAAC+TGG | - | chr3.1:28496922-28496941 | MS.gene018958:intron | 45.0% | |
| TGCAAAAGAGTCGGCATTAG+AGG | - | chr3.1:28497644-28497663 | MS.gene018958:CDS | 45.0% | |
| TGCTGCTGATGCAAAAGAGT+CGG | - | chr3.1:28497635-28497654 | MS.gene018958:CDS | 45.0% | |
| TGCTGTGCAATGTCAGATGT+TGG | - | chr3.1:28494339-28494358 | MS.gene018958:intron | 45.0% | |
| TGTTGGACATGACGTATCCA+GGG | - | chr3.1:28494356-28494375 | MS.gene018958:intron | 45.0% | |
| TTGGGGGTCGAAAATATAGG+GGG | + | chr3.1:28495498-28495517 | None:intergenic | 45.0% | |
| ! | CATTCTCCAGTTCTGATGTC+TGG | + | chr3.1:28496931-28496950 | None:intergenic | 45.0% |
| ! | GTATTGGAGGAGGATTTTGG+AGG | - | chr3.1:28495413-28495432 | MS.gene018958:intron | 45.0% |
| ! | TGTGTTGCTACCTTGTGCAT+TGG | + | chr3.1:28494388-28494407 | None:intergenic | 45.0% |
| ! | TTGAGAGAAAAGGGCTTTGG+GGG | - | chr3.1:28495337-28495356 | MS.gene018958:intron | 45.0% |
| !! | TGTTGCACTAGCTGGTCTTT+GGG | - | chr3.1:28493593-28493612 | MS.gene018958:intron | 45.0% |
| !! | TTGTTGCACTAGCTGGTCTT+TGG | - | chr3.1:28493592-28493611 | MS.gene018958:intron | 45.0% |
| AAACAGACCCTTAGGAAGGG+TGG | - | chr3.1:28495544-28495563 | MS.gene018958:intron | 50.0% | |
| ACCCTTAATCCTACGCTCCA+CGG | + | chr3.1:28496210-28496229 | None:intergenic | 50.0% | |
| ACCCTTCCTAAGGGTCTGTT+TGG | + | chr3.1:28495545-28495564 | None:intergenic | 50.0% | |
| ACTACACTGCAAGCCTTTGC+TGG | + | chr3.1:28496968-28496987 | None:intergenic | 50.0% | |
| ACTATAATCCCGTGGAGCGT+AGG | - | chr3.1:28496198-28496217 | MS.gene018958:intron | 50.0% | |
| AGCTGGGCTTCAATGCTGAA+AGG | + | chr3.1:28496549-28496568 | None:intergenic | 50.0% | |
| AGGGTTAACCACCCTTCCTA+AGG | + | chr3.1:28495555-28495574 | None:intergenic | 50.0% | |
| ATCGAGGACAAGTGGAGGAT+CGG | - | chr3.1:28496422-28496441 | MS.gene018958:intron | 50.0% | |
| CCCAAACAGACCCTTAGGAA+GGG | - | chr3.1:28495541-28495560 | MS.gene018958:intron | 50.0% | |
| CCCTTCCTAAGGGTCTGTTT+GGG | + | chr3.1:28495544-28495563 | None:intergenic | 50.0% | |
| CTAGAGAGGAGCAGACTCTA+AGG | + | chr3.1:28493468-28493487 | None:intergenic | 50.0% | |
| CTTAGAGTCTGCTCCTCTCT+AGG | - | chr3.1:28493466-28493485 | MS.gene018958:intron | 50.0% | |
| GAAACACTCCAGACGATCGA+AGG | + | chr3.1:28497133-28497152 | None:intergenic | 50.0% | |
| GCGTAGGATTAAGGGTGGAA+AGG | - | chr3.1:28496214-28496233 | MS.gene018958:intron | 50.0% | |
| GGCGACGAGTATAGGGATAA+TGG | - | chr3.1:28493201-28493220 | MS.gene018958:CDS | 50.0% | |
| GGGTCTGTTTGGGAATTTGG+AGG | + | chr3.1:28495534-28495553 | None:intergenic | 50.0% | |
| GGGTTAACCACCCTTCCTAA+GGG | + | chr3.1:28495554-28495573 | None:intergenic | 50.0% | |
| GTTGGACATGACGTATCCAG+GGG | - | chr3.1:28494357-28494376 | MS.gene018958:intron | 50.0% | |
| GTTTGGGAATTTGGAGGGGA+GGG | + | chr3.1:28495528-28495547 | None:intergenic | 50.0% | |
| TCCCAAACAGACCCTTAGGA+AGG | - | chr3.1:28495540-28495559 | MS.gene018958:intron | 50.0% | |
| TCTGTGAGTTTGGAGGGGAA+GGG | - | chr3.1:28495263-28495282 | MS.gene018958:intron | 50.0% | |
| TGCTATCAGGCGCTATCATC+AGG | + | chr3.1:28496669-28496688 | None:intergenic | 50.0% | |
| TGGGCTTCAATGCTGAAAGG+AGG | + | chr3.1:28496546-28496565 | None:intergenic | 50.0% | |
| TGGGGAAGAGTAAAAGGGCA+AGG | + | chr3.1:28495176-28495195 | None:intergenic | 50.0% | |
| TGTTTGGGAATTTGGAGGGG+AGG | + | chr3.1:28495529-28495548 | None:intergenic | 50.0% | |
| TTCGAACCTGAGACCTAGAG+AGG | + | chr3.1:28493482-28493501 | None:intergenic | 50.0% | |
| TTTAATTGAGCCCCCGCTAG+TGG | - | chr3.1:28493560-28493579 | MS.gene018958:intron | 50.0% | |
| TTTGGGAATTTGGAGGGGAG+GGG | + | chr3.1:28495527-28495546 | None:intergenic | 50.0% | |
| ! | GCTTGTTAAAGGCCGACCTT+TGG | - | chr3.1:28495870-28495889 | MS.gene018958:intron | 50.0% |
| ! | GGCTTTGTCTGTGAGTTTGG+AGG | - | chr3.1:28495256-28495275 | MS.gene018958:intron | 50.0% |
| !! | TGAGAGAAAAGGGCTTTGGG+GGG | - | chr3.1:28495338-28495357 | MS.gene018958:intron | 50.0% |
| AGGACAAGTGGAGGATCGGA+TGG | - | chr3.1:28496426-28496445 | MS.gene018958:intron | 55.0% | |
| AGGCCGACCTTTGGACAACT+TGG | - | chr3.1:28495879-28495898 | MS.gene018958:intron | 55.0% | |
| AGGGGTTGTGCCAATGCACA+AGG | - | chr3.1:28494375-28494394 | MS.gene018958:intron | 55.0% | |
| CCCGTGGAGCGTAGGATTAA+GGG | - | chr3.1:28496206-28496225 | MS.gene018958:intron | 55.0% | |
| CCCTTAATCCTACGCTCCAC+GGG | + | chr3.1:28496209-28496228 | None:intergenic | 55.0% | |
| GACAAGTGGAGGATCGGATG+GGG | - | chr3.1:28496428-28496447 | MS.gene018958:intron | 55.0% | |
| GGACAAGTGGAGGATCGGAT+GGG | - | chr3.1:28496427-28496446 | MS.gene018958:intron | 55.0% | |
| GTCGGCATTAGAGGAAGCTC+AGG | - | chr3.1:28497653-28497672 | MS.gene018958:CDS | 55.0% | |
| GTCTGTGAGTTTGGAGGGGA+AGG | - | chr3.1:28495262-28495281 | MS.gene018958:intron | 55.0% | |
| GTGGAGCGTAGGATTAAGGG+TGG | - | chr3.1:28496209-28496228 | MS.gene018958:intron | 55.0% | |
| TCCCGTGGAGCGTAGGATTA+AGG | - | chr3.1:28496205-28496224 | MS.gene018958:intron | 55.0% | |
| TCTGCTCCTCTCTAGGTCTC+AGG | - | chr3.1:28493473-28493492 | MS.gene018958:intron | 55.0% | |
| TGAGTTTGGAGGGGAAGGGA+GGG | - | chr3.1:28495267-28495286 | MS.gene018958:intron | 55.0% | |
| ! | GATTCAGGCCTTGTCCAAGC+AGG | - | chr3.1:28496467-28496486 | MS.gene018958:intron | 55.0% |
| ! | TTGTGCATTGGCACAACCCC+TGG | + | chr3.1:28494376-28494395 | None:intergenic | 55.0% |
| !! | GCACTAGCTGGTCTTTGGGA+CGG | - | chr3.1:28493597-28493616 | MS.gene018958:intron | 55.0% |
| AATTGAGCCCCCGCTAGTGG+AGG | - | chr3.1:28493563-28493582 | MS.gene018958:intron | 60.0% | |
| ACAATCCCGCCCTCCACTAG+CGG | + | chr3.1:28493576-28493595 | None:intergenic | 60.0% | |
| ATTGAGCCCCCGCTAGTGGA+GGG | - | chr3.1:28493564-28493583 | MS.gene018958:intron | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr3.1:28495268-28495287 | MS.gene018958:intron | 60.0% | |
| GGCGGGATTGTTGCACTAGC+TGG | - | chr3.1:28493585-28493604 | MS.gene018958:intron | 60.0% | |
| GTGAGTTTGGAGGGGAAGGG+AGG | - | chr3.1:28495266-28495285 | MS.gene018958:intron | 60.0% | |
| !! | AGGGGAGGGCTTTGGGAAAC+AGG | - | chr3.1:28495286-28495305 | MS.gene018958:intron | 60.0% |
| !!! | AGGGGAGGGGAGTGTTTTGG+GGG | + | chr3.1:28495514-28495533 | None:intergenic | 60.0% |
| !!! | GAGGGGAGGGGAGTGTTTTG+GGG | + | chr3.1:28495515-28495534 | None:intergenic | 60.0% |
| !!! | GGAGGGGAGGGGAGTGTTTT+GGG | + | chr3.1:28495516-28495535 | None:intergenic | 60.0% |
| !!! | TGGAGGGGAGGGGAGTGTTT+TGG | + | chr3.1:28495517-28495536 | None:intergenic | 60.0% |
| AATCCCGCCCTCCACTAGCG+GGG | + | chr3.1:28493574-28493593 | None:intergenic | 65.0% | |
| CAATCCCGCCCTCCACTAGC+GGG | + | chr3.1:28493575-28493594 | None:intergenic | 65.0% | |
| GGAAGGGAGGGGAGGGCTTT+GGG | - | chr3.1:28495279-28495298 | MS.gene018958:intron | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | - | chr3.1:28495272-28495291 | MS.gene018958:intron | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | - | chr3.1:28495271-28495290 | MS.gene018958:intron | 65.0% | |
| ATCCCGCCCTCCACTAGCGG+GGG | + | chr3.1:28493573-28493592 | None:intergenic | 70.0% | |
| GGGAAGGGAGGGGAGGGCTT+TGG | - | chr3.1:28495278-28495297 | MS.gene018958:intron | 70.0% | |
| AGCCCCCGCTAGTGGAGGGC+GGG | - | chr3.1:28493568-28493587 | MS.gene018958:intron | 75.0% | |
| GAGCCCCCGCTAGTGGAGGG+CGG | - | chr3.1:28493567-28493586 | MS.gene018958:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 28493199 | 28497731 | 28493199 | ID=MS.gene018958 |
| chr3.1 | mRNA | 28493199 | 28497731 | 28493199 | ID=MS.gene018958.t1;Parent=MS.gene018958 |
| chr3.1 | exon | 28497624 | 28497731 | 28497624 | ID=MS.gene018958.t1.exon1;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28497624 | 28497731 | 28497624 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| chr3.1 | exon | 28496534 | 28496602 | 28496534 | ID=MS.gene018958.t1.exon2;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28496534 | 28496602 | 28496534 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| chr3.1 | exon | 28496354 | 28496440 | 28496354 | ID=MS.gene018958.t1.exon3;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28496354 | 28496440 | 28496354 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| chr3.1 | exon | 28494971 | 28495077 | 28494971 | ID=MS.gene018958.t1.exon4;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28494971 | 28495077 | 28494971 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| chr3.1 | exon | 28494598 | 28494734 | 28494598 | ID=MS.gene018958.t1.exon5;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28494598 | 28494734 | 28494598 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| chr3.1 | exon | 28494442 | 28494518 | 28494442 | ID=MS.gene018958.t1.exon6;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28494442 | 28494518 | 28494442 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| chr3.1 | exon | 28493975 | 28494088 | 28493975 | ID=MS.gene018958.t1.exon7;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28493975 | 28494088 | 28493975 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| chr3.1 | exon | 28493199 | 28493324 | 28493199 | ID=MS.gene018958.t1.exon8;Parent=MS.gene018958.t1 |
| chr3.1 | CDS | 28493199 | 28493324 | 28493199 | ID=cds.MS.gene018958.t1;Parent=MS.gene018958.t1 |
| Gene Sequence |
| Protein sequence |
