Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50990.t1 | XP_013443148.1 | 97.8 | 274 | 6 | 0 | 1 | 274 | 1 | 274 | 1.60E-142 | 515.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50990.t1 | Q9FJJ5 | 74.6 | 264 | 64 | 2 | 1 | 263 | 1 | 262 | 7.5e-104 | 378.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50990.t1 | A0A072TJV8 | 97.8 | 274 | 6 | 0 | 1 | 274 | 1 | 274 | 1.2e-142 | 515.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene50990 | 0.815535 | 8.79E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene50990 | 0.817267 | 3.60E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene50990 | 0.803408 | 3.54E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene50990 | 0.806437 | 8.23E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene50990 | 0.823773 | 1.16E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene50990 | 0.858373 | 8.61E-63 | -1.69E-46 |
| MS.gene049821 | MS.gene50990 | 0.838212 | 3.29E-57 | -1.69E-46 |
| MS.gene049850 | MS.gene50990 | 0.852138 | 5.62E-61 | -1.69E-46 |
| MS.gene049979 | MS.gene50990 | 0.81288 | 3.39E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene50990 | 0.845426 | 4.09E-59 | -1.69E-46 |
| MS.gene050156 | MS.gene50990 | 0.811205 | 7.86E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene50990 | 0.823195 | 1.58E-53 | -1.69E-46 |
| MS.gene050438 | MS.gene50990 | 0.816037 | 6.80E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene50990 | 0.838408 | 2.93E-57 | -1.69E-46 |
| MS.gene050586 | MS.gene50990 | 0.800071 | 1.71E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene50990 | 0.836645 | 8.29E-57 | -1.69E-46 |
| MS.gene050721 | MS.gene50990 | 0.834484 | 2.92E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene50990 | 0.82395 | 1.05E-53 | -1.69E-46 |
| MS.gene050750 | MS.gene50990 | 0.80092 | 1.15E-48 | -1.69E-46 |
| MS.gene050787 | MS.gene50990 | 0.810203 | 1.30E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene50990 | 0.842078 | 3.22E-58 | -1.69E-46 |
| MS.gene050808 | MS.gene50990 | 0.817239 | 3.66E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene50990 | 0.820617 | 6.24E-53 | -1.69E-46 |
| MS.gene050826 | MS.gene50990 | 0.81506 | 1.12E-51 | -1.69E-46 |
| MS.gene050959 | MS.gene50990 | 0.83964 | 1.40E-57 | -1.69E-46 |
| MS.gene051180 | MS.gene50990 | 0.800553 | 1.37E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene50990 | 0.820885 | 5.42E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene50990 | 0.849148 | 3.89E-60 | -1.69E-46 |
| MS.gene051265 | MS.gene50990 | 0.835238 | 1.88E-56 | -1.69E-46 |
| MS.gene051328 | MS.gene50990 | 0.810583 | 1.07E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene50990 | 0.806992 | 6.28E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene50990 | 0.815789 | 7.72E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene50990 | 0.84907 | 4.09E-60 | -1.69E-46 |
| MS.gene051720 | MS.gene50990 | 0.84267 | 2.24E-58 | -1.69E-46 |
| MS.gene052012 | MS.gene50990 | 0.800487 | 1.41E-48 | -1.69E-46 |
| MS.gene052020 | MS.gene50990 | 0.843905 | 1.05E-58 | -1.69E-46 |
| MS.gene052133 | MS.gene50990 | 0.822687 | 2.07E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene50990 | 0.818774 | 1.64E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene50990 | 0.845625 | 3.61E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene50990 | 0.816043 | 6.78E-52 | -1.69E-46 |
| MS.gene052561 | MS.gene50990 | 0.817792 | 2.74E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene50990 | 0.80281 | 4.70E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene50990 | 0.820732 | 5.87E-53 | -1.69E-46 |
| MS.gene052613 | MS.gene50990 | 0.839435 | 1.59E-57 | -1.69E-46 |
| MS.gene052665 | MS.gene50990 | 0.837865 | 4.04E-57 | -1.69E-46 |
| MS.gene052773 | MS.gene50990 | 0.810453 | 1.14E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene50990 | 0.864462 | 1.19E-64 | -1.69E-46 |
| MS.gene052896 | MS.gene50990 | 0.849605 | 2.90E-60 | -1.69E-46 |
| MS.gene053008 | MS.gene50990 | 0.835499 | 1.62E-56 | -1.69E-46 |
| MS.gene053054 | MS.gene50990 | -0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene50990 | 0.839501 | 1.53E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene50990 | 0.821918 | 3.13E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene50990 | 0.808595 | 2.87E-50 | -1.69E-46 |
| MS.gene053630 | MS.gene50990 | 0.809554 | 1.79E-50 | -1.69E-46 |
| MS.gene053883 | MS.gene50990 | 0.819701 | 1.01E-52 | -1.69E-46 |
| MS.gene05414 | MS.gene50990 | 0.825898 | 3.65E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene50990 | 0.82876 | 7.51E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene50990 | 0.817312 | 3.52E-52 | -1.69E-46 |
| MS.gene05423 | MS.gene50990 | 0.801502 | 8.73E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene50990 | 0.80454 | 2.06E-49 | -1.69E-46 |
| MS.gene054472 | MS.gene50990 | 0.848434 | 6.14E-60 | -1.69E-46 |
| MS.gene05462 | MS.gene50990 | 0.820891 | 5.40E-53 | -1.69E-46 |
| MS.gene05468 | MS.gene50990 | 0.802918 | 4.47E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene50990 | 0.803155 | 3.99E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene50990 | 0.810497 | 1.12E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene50990 | 0.864233 | 1.41E-64 | -1.69E-46 |
| MS.gene055466 | MS.gene50990 | 0.870282 | 1.64E-66 | -1.69E-46 |
| MS.gene055468 | MS.gene50990 | 0.856783 | 2.55E-62 | -1.69E-46 |
| MS.gene055469 | MS.gene50990 | 0.808247 | 3.40E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene50990 | 0.815613 | 8.45E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene50990 | -0.805209 | 1.49E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene50990 | 0.831537 | 1.58E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene50990 | 0.833718 | 4.54E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene50990 | 0.854995 | 8.49E-62 | -1.69E-46 |
| MS.gene055890 | MS.gene50990 | 0.803779 | 2.96E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene50990 | 0.808113 | 3.63E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene50990 | 0.823698 | 1.20E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene50990 | 0.827025 | 1.96E-54 | -1.69E-46 |
| MS.gene056069 | MS.gene50990 | -0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene50990 | 0.816232 | 6.15E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene50990 | 0.81084 | 9.44E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene50990 | 0.801017 | 1.10E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene50990 | 0.818753 | 1.66E-52 | -1.69E-46 |
| MS.gene056498 | MS.gene50990 | 0.820062 | 8.37E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene50990 | 0.822596 | 2.18E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene50990 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene50990 | 0.823669 | 1.22E-53 | -1.69E-46 |
| MS.gene057314 | MS.gene50990 | 0.806844 | 6.75E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene50990 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene50990 | 0.833821 | 4.28E-56 | -1.69E-46 |
| MS.gene057869 | MS.gene50990 | 0.803994 | 2.67E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene50990 | 0.852545 | 4.30E-61 | -1.69E-46 |
| MS.gene058084 | MS.gene50990 | 0.818746 | 1.67E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene50990 | 0.802306 | 5.97E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene50990 | 0.846873 | 1.65E-59 | -1.69E-46 |
| MS.gene058636 | MS.gene50990 | 0.846721 | 1.82E-59 | -1.69E-46 |
| MS.gene058829 | MS.gene50990 | 0.813894 | 2.03E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene50990 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene059128 | MS.gene50990 | 0.804752 | 1.86E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene50990 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene059569 | MS.gene50990 | 0.80575 | 1.15E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene50990 | 0.822098 | 2.84E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene50990 | 0.81546 | 9.14E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene50990 | 0.817103 | 3.92E-52 | -1.69E-46 |
| MS.gene059937 | MS.gene50990 | 0.828341 | 9.49E-55 | -1.69E-46 |
| MS.gene060137 | MS.gene50990 | -0.823621 | 1.25E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene50990 | 0.811558 | 6.59E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene50990 | 0.830091 | 3.57E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene50990 | 0.828171 | 1.04E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene50990 | 0.812815 | 3.51E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene50990 | 0.83015 | 3.45E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene50990 | 0.833111 | 6.43E-56 | -1.69E-46 |
| MS.gene060634 | MS.gene50990 | -0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene060781 | MS.gene50990 | 0.802762 | 4.81E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene50990 | 0.814377 | 1.59E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene50990 | 0.841213 | 5.45E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015202 | MS.gene50990 | PPI |
| MS.gene09543 | MS.gene50990 | PPI |
| MS.gene015206 | MS.gene50990 | PPI |
| MS.gene50990 | MS.gene06707 | PPI |
| MS.gene06926 | MS.gene50990 | PPI |
| MS.gene50990 | MS.gene018958 | PPI |
| MS.gene033134 | MS.gene50990 | PPI |
| MS.gene03589 | MS.gene50990 | PPI |
| MS.gene50990 | MS.gene09540 | PPI |
| MS.gene58445 | MS.gene50990 | PPI |
| MS.gene20245 | MS.gene50990 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50990.t1 | MTR_0036s0210 | 97.810 | 274 | 6 | 0 | 1 | 274 | 1 | 274 | 0.0 | 555 |
| MS.gene50990.t1 | MTR_4g108330 | 76.923 | 273 | 58 | 3 | 1 | 270 | 1 | 271 | 6.13e-155 | 433 |
| MS.gene50990.t1 | MTR_5g016520 | 58.304 | 283 | 95 | 5 | 1 | 267 | 1 | 276 | 3.85e-109 | 319 |
| MS.gene50990.t1 | MTR_2072s0010 | 92.308 | 52 | 4 | 0 | 37 | 88 | 1 | 52 | 2.58e-26 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50990.t1 | AT5G62500 | 74.621 | 264 | 64 | 2 | 1 | 263 | 1 | 262 | 1.98e-145 | 409 |
| MS.gene50990.t1 | AT3G47690 | 72.000 | 275 | 61 | 4 | 1 | 271 | 1 | 263 | 6.62e-142 | 400 |
| MS.gene50990.t1 | AT5G67270 | 55.926 | 270 | 103 | 4 | 1 | 256 | 1 | 268 | 2.92e-103 | 304 |
Find 57 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGTCATGCTTCAGTTTC+TGG | 0.116159 | 3.2:+28907807 | None:intergenic |
| ACCGAAATGTTAAGAGTTTA+AGG | 0.172808 | 3.2:-28909396 | MS.gene50990:CDS |
| AGCTAACCTGAGTTTCTATT+TGG | 0.188642 | 3.2:+28909316 | None:intergenic |
| TCCCGTGGAGCGTAGGATTA+AGG | 0.235106 | 3.2:-28909428 | MS.gene50990:CDS |
| CGTTACTGTGATTCTGTTAA+TGG | 0.239870 | 3.2:-28909708 | MS.gene50990:CDS |
| TCCTTAAACTCTTAACATTT+CGG | 0.298932 | 3.2:+28909395 | None:intergenic |
| CCAGTTGACCTTGATATCTT+AGG | 0.307940 | 3.2:+28909219 | None:intergenic |
| GAAGTTAACAGGCTTGTTAA+AGG | 0.316943 | 3.2:-28909771 | MS.gene50990:CDS |
| CCCGTGGAGCGTAGGATTAA+GGG | 0.337587 | 3.2:-28909427 | MS.gene50990:CDS |
| GGCAGCATATTGAAGTTAAC+AGG | 0.350762 | 3.2:-28909782 | MS.gene50990:intron |
| CATTCTCCAGTTCTGATGTC+TGG | 0.371007 | 3.2:+28908584 | None:intergenic |
| TAATTCGTCAGCAGAGATTC+AGG | 0.371636 | 3.2:-28909181 | MS.gene50990:CDS |
| ATTCATTGCTAGGCTGCATC+TGG | 0.385662 | 3.2:-28910942 | MS.gene50990:intron |
| CAAAATCTCAGTGGATCTCT+TGG | 0.386039 | 3.2:-28908659 | MS.gene50990:CDS |
| TGCAAAAGAGTCGGCATTAG+AGG | 0.399645 | 3.2:-28907877 | MS.gene50990:CDS |
| GGCGACGAGTATAGGGATAA+TGG | 0.410039 | 3.2:-28912037 | MS.gene50990:CDS |
| TCAAACACTACGAATAATAC+TGG | 0.415660 | 3.2:-28909355 | MS.gene50990:CDS |
| GTCGGCATTAGAGGAAGCTC+AGG | 0.421605 | 3.2:-28907868 | MS.gene50990:CDS |
| GCTTGTTAAAGGCCGACCTT+TGG | 0.439334 | 3.2:-28909760 | MS.gene50990:CDS |
| ATGTTAGACATGACGTATCC+AGG | 0.448200 | 3.2:-28910903 | MS.gene50990:CDS |
| CCTAAGATATCAAGGTCAAC+TGG | 0.449224 | 3.2:-28909219 | MS.gene50990:CDS |
| TTGTGCATCGGCACAACCCC+TGG | 0.449890 | 3.2:+28910885 | None:intergenic |
| AGGCCGACCTTTGGACAACT+TGG | 0.450161 | 3.2:-28909751 | MS.gene50990:CDS |
| TCAAAACTATAAAGTTCTAC+AGG | 0.481633 | 3.2:-28910733 | MS.gene50990:CDS |
| TCTATGCCAGACATCAGAAC+TGG | 0.488709 | 3.2:-28908590 | MS.gene50990:CDS |
| AGGTCAACTGGAGGATCGGA+TGG | 0.491495 | 3.2:-28909207 | MS.gene50990:CDS |
| ACTACGAATAATACTGGTTC+AGG | 0.494201 | 3.2:-28909349 | MS.gene50990:CDS |
| AGTAACGTTTCAGCCATTGT+AGG | 0.497462 | 3.2:+28909724 | None:intergenic |
| CCCTTAATCCTACGCTCCAC+GGG | 0.509614 | 3.2:+28909427 | None:intergenic |
| GATACGTCATGTCTAACATC+TGG | 0.514396 | 3.2:+28910907 | None:intergenic |
| ATCAAGGTCAACTGGAGGAT+CGG | 0.530947 | 3.2:-28909211 | MS.gene50990:CDS |
| GGTCAACTGGAGGATCGGAT+GGG | 0.532130 | 3.2:-28909206 | MS.gene50990:CDS |
| GATTCAGGCCTTGTCCAAGC+AGG | 0.534074 | 3.2:-28909166 | MS.gene50990:intron |
| ACTATAATCCCGTGGAGCGT+AGG | 0.534515 | 3.2:-28909435 | MS.gene50990:CDS |
| ACCCTTAATCCTACGCTCCA+CGG | 0.538190 | 3.2:+28909426 | None:intergenic |
| TTACATTAATCAAACATTGG+AGG | 0.542731 | 3.2:-28907844 | MS.gene50990:CDS |
| CTAAGTCCAAATAGAAACTC+AGG | 0.542973 | 3.2:-28909322 | MS.gene50990:intron |
| GGCTTACATTAATCAAACAT+TGG | 0.556676 | 3.2:-28907847 | MS.gene50990:CDS |
| GTGTAGGACCTAAGATATCA+AGG | 0.558318 | 3.2:-28909227 | MS.gene50990:intron |
| GTCAACTGGAGGATCGGATG+GGG | 0.564150 | 3.2:-28909205 | MS.gene50990:CDS |
| TGTTAGACATGACGTATCCA+GGG | 0.569863 | 3.2:-28910902 | MS.gene50990:CDS |
| AAGTTGTACCTGCTTGGACA+AGG | 0.572645 | 3.2:+28909158 | None:intergenic |
| TAATCTCTCTCGCATTGAAG+AGG | 0.585059 | 3.2:-28911953 | MS.gene50990:intron |
| CAACAAGCTGAAAATTGCAA+AGG | 0.596592 | 3.2:-28910703 | MS.gene50990:intron |
| GCGTAGGATTAAGGGTGGAA+AGG | 0.606069 | 3.2:-28909419 | MS.gene50990:CDS |
| TGTGTTGCTACCTTGTGCAT+CGG | 0.608007 | 3.2:+28910873 | None:intergenic |
| GTAGAAATGAGATTCTGAGT+TGG | 0.610210 | 3.2:-28911996 | MS.gene50990:CDS |
| AGGGGTTGTGCCGATGCACA+AGG | 0.630070 | 3.2:-28910883 | MS.gene50990:intron |
| ACTCCAAGTTGTCCAAAGGT+CGG | 0.639935 | 3.2:+28909748 | None:intergenic |
| TGCTGCTGATGCAAAAGAGT+CGG | 0.643139 | 3.2:-28907886 | MS.gene50990:CDS |
| AGGAACTCCAAGTTGTCCAA+AGG | 0.653402 | 3.2:+28909744 | None:intergenic |
| TACTGATCTCAAAATCTCAG+TGG | 0.654360 | 3.2:-28908668 | MS.gene50990:CDS |
| TACTGTGATTCTGTTAATGG+TGG | 0.661559 | 3.2:-28909705 | MS.gene50990:CDS |
| ACAACTTGGAGTTCCTACAA+TGG | 0.679808 | 3.2:-28909737 | MS.gene50990:CDS |
| GTGGAGCGTAGGATTAAGGG+TGG | 0.682025 | 3.2:-28909424 | MS.gene50990:CDS |
| AAGATATCAAGGTCAACTGG+AGG | 0.692502 | 3.2:-28909216 | MS.gene50990:CDS |
| GTTAGACATGACGTATCCAG+GGG | 0.713529 | 3.2:-28910901 | MS.gene50990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAAATTTACAACTTA+AGG | + | chr3.2:28911570-28911589 | None:intergenic | 10.0% |
| !! | TATAAAAATTTACAACTTAA+GGG | + | chr3.2:28911569-28911588 | None:intergenic | 10.0% |
| !!! | AAAAGTACATTAATTAAAAA+CGG | + | chr3.2:28910602-28910621 | None:intergenic | 10.0% |
| !!! | ATTAAAAGTAATTTATTTTC+GGG | - | chr3.2:28909945-28909964 | MS.gene50990:intron | 10.0% |
| !!! | GTAAATTTTTATATTTCTTT+AGG | - | chr3.2:28911576-28911595 | MS.gene50990:intron | 10.0% |
| !!! | TTACAAATAATTTTGAAATT+TGG | - | chr3.2:28909048-28909067 | MS.gene50990:intron | 10.0% |
| !! | TTCTACAATTAAATAGTTTA+CGG | + | chr3.2:28909501-28909520 | None:intergenic | 15.0% |
| !!! | AAAATGAATTTAGAACATAT+GGG | - | chr3.2:28911831-28911850 | MS.gene50990:intron | 15.0% |
| !!! | ACTAGTTTCATTTTTATTTT+TGG | - | chr3.2:28909858-28909877 | MS.gene50990:intron | 15.0% |
| !!! | ACTTTTTTTTTTTGAAAACT+CGG | + | chr3.2:28908226-28908245 | None:intergenic | 15.0% |
| !!! | AGGTTAATTTGTTTTTAAAA+CGG | - | chr3.2:28908830-28908849 | MS.gene50990:intron | 15.0% |
| !!! | CTAGTTTCATTTTTATTTTT+GGG | - | chr3.2:28909859-28909878 | MS.gene50990:intron | 15.0% |
| !!! | TTTCTAAAAATTTTTTGTTC+TGG | - | chr3.2:28911483-28911502 | MS.gene50990:intron | 15.0% |
| !! | AAACTAAAACAATGTGTATT+TGG | + | chr3.2:28908526-28908545 | None:intergenic | 20.0% |
| !! | AGAAATCAATTCAAAAACAA+TGG | + | chr3.2:28908810-28908829 | None:intergenic | 20.0% |
| !! | AGTAACAATGAACAAAAAAA+AGG | + | chr3.2:28911143-28911162 | None:intergenic | 20.0% |
| !! | ATATACAAGAACTAATAGAT+TGG | + | chr3.2:28910949-28910968 | None:intergenic | 20.0% |
| !! | ATATTCAATGATATAGATTC+AGG | - | chr3.2:28908360-28908379 | MS.gene50990:intron | 20.0% |
| !! | CAACTTATTAGGAATATTAT+AGG | + | chr3.2:28909402-28909421 | None:intergenic | 20.0% |
| !! | CATGTACATTTCAATATTTA+AGG | - | chr3.2:28909728-28909747 | MS.gene50990:CDS | 20.0% |
| !! | CATTTAACAAAAGAAATGAA+GGG | + | chr3.2:28907948-28907967 | None:intergenic | 20.0% |
| !! | GTTTCTCTTTAAATATGATA+TGG | - | chr3.2:28911675-28911694 | MS.gene50990:intron | 20.0% |
| !! | TAAAAACGGAAAAAAGTTAA+GGG | + | chr3.2:28910588-28910607 | None:intergenic | 20.0% |
| !! | TAATAAAAGTAGTATGCATT+TGG | - | chr3.2:28908466-28908485 | MS.gene50990:intron | 20.0% |
| !! | TATGAAATAGTATCTTTATC+AGG | - | chr3.2:28909265-28909284 | MS.gene50990:intron | 20.0% |
| !! | TATTCAATGATATAGATTCA+GGG | - | chr3.2:28908361-28908380 | MS.gene50990:intron | 20.0% |
| !! | TCATTTAACAAAAGAAATGA+AGG | + | chr3.2:28907949-28907968 | None:intergenic | 20.0% |
| !! | TCTACAATCAAATAGTTTAT+GGG | + | chr3.2:28909563-28909582 | None:intergenic | 20.0% |
| !! | TGAAGGTTAATTTATTAACT+TGG | - | chr3.2:28909303-28909322 | MS.gene50990:intron | 20.0% |
| !! | TTAAAAACGGAAAAAAGTTA+AGG | + | chr3.2:28910589-28910608 | None:intergenic | 20.0% |
| !! | TTCTACAATCAAATAGTTTA+TGG | + | chr3.2:28909564-28909583 | None:intergenic | 20.0% |
| !!! | AAATGAATTTAGAACATATG+GGG | - | chr3.2:28911832-28911851 | MS.gene50990:intron | 20.0% |
| !!! | ACTTTTACTTTTCAAAACTA+CGG | - | chr3.2:28911227-28911246 | MS.gene50990:intron | 20.0% |
| !!! | GAAAATGAATTTAGAACATA+TGG | - | chr3.2:28911830-28911849 | MS.gene50990:intron | 20.0% |
| !!! | GGTTAATTTGTTTTTAAAAC+GGG | - | chr3.2:28908831-28908850 | MS.gene50990:intron | 20.0% |
| !!! | GTTAATTTGTTTTTAAAACG+GGG | - | chr3.2:28908832-28908851 | MS.gene50990:intron | 20.0% |
| !!! | TATGTACTATATTTTCAGTT+GGG | + | chr3.2:28910784-28910803 | None:intergenic | 20.0% |
| !!! | TATTTAATTGTAGAAGCATA+TGG | - | chr3.2:28909506-28909525 | MS.gene50990:intron | 20.0% |
| !!! | TTGAAGGTATTAGAAAATTT+AGG | + | chr3.2:28911451-28911470 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGAATTGATTTCT+AGG | - | chr3.2:28908810-28908829 | MS.gene50990:intron | 20.0% |
| !!! | TTTGATTTTTTTGATCAATC+TGG | - | chr3.2:28908428-28908447 | MS.gene50990:intron | 20.0% |
| !!! | TTTTTATATTTCTTTAGGCA+AGG | - | chr3.2:28911581-28911600 | MS.gene50990:intron | 20.0% |
| ! | AAAAATCTTACCTATGTTTC+TGG | - | chr3.2:28908393-28908412 | MS.gene50990:intron | 25.0% |
| ! | AACATGAGAACATATATACA+TGG | + | chr3.2:28910354-28910373 | None:intergenic | 25.0% |
| ! | ACATGAGAACATATATACAT+GGG | + | chr3.2:28910353-28910372 | None:intergenic | 25.0% |
| ! | ACTGGTATATGAAAATACTT+TGG | - | chr3.2:28909987-28910006 | MS.gene50990:intron | 25.0% |
| ! | ATCAAAGCTGATTAAATGAT+AGG | + | chr3.2:28910209-28910228 | None:intergenic | 25.0% |
| ! | ATCCTTATGTTAAGATTTGA+TGG | - | chr3.2:28909796-28909815 | MS.gene50990:intron | 25.0% |
| ! | ATTGAAATGTACATGAACAA+AGG | + | chr3.2:28909723-28909742 | None:intergenic | 25.0% |
| ! | CTACAATCAAATAGTTTATG+GGG | + | chr3.2:28909562-28909581 | None:intergenic | 25.0% |
| ! | GCATGTGTTAATAATCAAAT+AGG | - | chr3.2:28911777-28911796 | MS.gene50990:intron | 25.0% |
| ! | GTATTAGTGAAAATATGCAT+TGG | + | chr3.2:28910316-28910335 | None:intergenic | 25.0% |
| ! | TAACATAAGGATATACAACT+GGG | + | chr3.2:28909788-28909807 | None:intergenic | 25.0% |
| ! | TAAGCTCAAAACAACTTATT+AGG | + | chr3.2:28909413-28909432 | None:intergenic | 25.0% |
| ! | TAATAGATTGGTAGGTAATT+GGG | + | chr3.2:28910937-28910956 | None:intergenic | 25.0% |
| ! | TATAACTTGAGAACAAAAAC+TGG | - | chr3.2:28909969-28909988 | MS.gene50990:intron | 25.0% |
| ! | TATTTCGGTTAAAATTGTCT+TGG | - | chr3.2:28908637-28908656 | MS.gene50990:CDS | 25.0% |
| ! | TCAAAACTATAAAGTTCTAC+AGG | - | chr3.2:28909118-28909137 | MS.gene50990:intron | 25.0% |
| ! | TCCATAATCAAAGAGTTTAT+GGG | + | chr3.2:28909629-28909648 | None:intergenic | 25.0% |
| ! | TCCTAAAAGGAAAATAAGAA+GGG | + | chr3.2:28910396-28910415 | None:intergenic | 25.0% |
| ! | TCCTTAAACTCTTAACATTT+CGG | + | chr3.2:28910459-28910478 | None:intergenic | 25.0% |
| ! | TGTTCTGCTTAAAATTTAGA+GGG | + | chr3.2:28909186-28909205 | None:intergenic | 25.0% |
| ! | TGTTTCCATATACTATCTTA+GGG | + | chr3.2:28909448-28909467 | None:intergenic | 25.0% |
| ! | TTAACATAAGGATATACAAC+TGG | + | chr3.2:28909789-28909808 | None:intergenic | 25.0% |
| ! | TTACATTAATCAAACATTGG+AGG | - | chr3.2:28912007-28912026 | MS.gene50990:CDS | 25.0% |
| ! | TTCCTAAAAGGAAAATAAGA+AGG | + | chr3.2:28910397-28910416 | None:intergenic | 25.0% |
| ! | TTGAAATGTACATGAACAAA+GGG | + | chr3.2:28909722-28909741 | None:intergenic | 25.0% |
| ! | TTTGATTATTAACACATGCA+TGG | + | chr3.2:28911776-28911795 | None:intergenic | 25.0% |
| !! | CTATGTACTATATTTTCAGT+TGG | + | chr3.2:28910785-28910804 | None:intergenic | 25.0% |
| !! | TAAATTTTAAGCAGAACACT+TGG | - | chr3.2:28909188-28909207 | MS.gene50990:CDS | 25.0% |
| !! | TTTTGATGTAATTGCTTGAA+TGG | - | chr3.2:28910283-28910302 | MS.gene50990:intron | 25.0% |
| !!! | ATGTTACTTTTTGCAGATAT+CGG | - | chr3.2:28911920-28911939 | MS.gene50990:intron | 25.0% |
| !!! | ATTAATGTACTTTTGAGTGT+AGG | - | chr3.2:28910608-28910627 | MS.gene50990:intron | 25.0% |
| !!! | ATTTTAACCGAAATAAGAGA+TGG | + | chr3.2:28908632-28908651 | None:intergenic | 25.0% |
| !!! | CTTTTACTTTTCAAAACTAC+GGG | - | chr3.2:28911228-28911247 | MS.gene50990:intron | 25.0% |
| !!! | TACTTTGCTTTTTGTTTTAC+AGG | - | chr3.2:28911159-28911178 | MS.gene50990:intron | 25.0% |
| !!! | TGAAATTTGGTGTTCATTTT+AGG | - | chr3.2:28909061-28909080 | MS.gene50990:intron | 25.0% |
| !!! | TTTTGTCACTTTATATCGTT+AGG | - | chr3.2:28911516-28911535 | MS.gene50990:intron | 25.0% |
| AAAAGACATGCAATTGATGA+AGG | + | chr3.2:28909898-28909917 | None:intergenic | 30.0% | |
| AAATGACTCTTTGTATGGTT+TGG | - | chr3.2:28911606-28911625 | MS.gene50990:intron | 30.0% | |
| AACATAAGGATATACAACTG+GGG | + | chr3.2:28909787-28909806 | None:intergenic | 30.0% | |
| AAGCTGATTAAATGATAGGA+AGG | + | chr3.2:28910205-28910224 | None:intergenic | 30.0% | |
| ACAAGAACTAATAGATTGGT+AGG | + | chr3.2:28910945-28910964 | None:intergenic | 30.0% | |
| ACCCATAAACTCTTTGATTA+TGG | - | chr3.2:28909625-28909644 | MS.gene50990:intron | 30.0% | |
| ACCGAAATGTTAAGAGTTTA+AGG | - | chr3.2:28910455-28910474 | MS.gene50990:intron | 30.0% | |
| ATACAATTTCAAGAAACGCA+GGG | + | chr3.2:28911710-28911729 | None:intergenic | 30.0% | |
| ATAGTATCTTTATCAGGATC+TGG | - | chr3.2:28909271-28909290 | MS.gene50990:intron | 30.0% | |
| ATGCAGATCAAATAATTCCT+AGG | + | chr3.2:28908297-28908316 | None:intergenic | 30.0% | |
| ATTAAAAGCAAAGCTCTGTA+TGG | + | chr3.2:28908145-28908164 | None:intergenic | 30.0% | |
| CTAATAGATTGGTAGGTAAT+TGG | + | chr3.2:28910938-28910957 | None:intergenic | 30.0% | |
| CTCCATCAAATCTTAACATA+AGG | + | chr3.2:28909801-28909820 | None:intergenic | 30.0% | |
| CTGTTTCCATATACTATCTT+AGG | + | chr3.2:28909449-28909468 | None:intergenic | 30.0% | |
| GAAATTGTATATGCTTGCTT+TGG | - | chr3.2:28911720-28911739 | MS.gene50990:intron | 30.0% | |
| GGCTTACATTAATCAAACAT+TGG | - | chr3.2:28912004-28912023 | MS.gene50990:CDS | 30.0% | |
| GTCCATAATCAAAGAGTTTA+TGG | + | chr3.2:28909630-28909649 | None:intergenic | 30.0% | |
| GTGTTCTGCTTAAAATTTAG+AGG | + | chr3.2:28909187-28909206 | None:intergenic | 30.0% | |
| TACTTTCTCTCAATATCCAT+GGG | + | chr3.2:28910817-28910836 | None:intergenic | 30.0% | |
| TATACAATTTCAAGAAACGC+AGG | + | chr3.2:28911711-28911730 | None:intergenic | 30.0% | |
| TATGACATGTGCACTTATAT+GGG | - | chr3.2:28909352-28909371 | MS.gene50990:CDS | 30.0% | |
| TCAAACACTACGAATAATAC+TGG | - | chr3.2:28910496-28910515 | MS.gene50990:intron | 30.0% | |
| TGAAATGTACATGAACAAAG+GGG | + | chr3.2:28909721-28909740 | None:intergenic | 30.0% | |
| TGAGACAATTTGGATAGTTA+AGG | - | chr3.2:28908714-28908733 | MS.gene50990:intron | 30.0% | |
| TGCAGATCAAATAATTCCTA+GGG | + | chr3.2:28908296-28908315 | None:intergenic | 30.0% | |
| TTAACAAAAGAAATGAAGGG+AGG | + | chr3.2:28907945-28907964 | None:intergenic | 30.0% | |
| TTAAGATTTGATGGAGTACA+AGG | - | chr3.2:28909805-28909824 | MS.gene50990:intron | 30.0% | |
| TTACTTTCTCTCAATATCCA+TGG | + | chr3.2:28910818-28910837 | None:intergenic | 30.0% | |
| TTATGACATGTGCACTTATA+TGG | - | chr3.2:28909351-28909370 | MS.gene50990:CDS | 30.0% | |
| ! | CAGGTACAACTTTGAAAATT+AGG | - | chr3.2:28910704-28910723 | MS.gene50990:CDS | 30.0% |
| ! | TCAATTGCATGTCTTTTATG+CGG | - | chr3.2:28909901-28909920 | MS.gene50990:intron | 30.0% |
| !! | AATGTGTATTTGGTCTTAGT+TGG | + | chr3.2:28908516-28908535 | None:intergenic | 30.0% |
| !!! | ACACAGTTTTTGAGACAATT+TGG | - | chr3.2:28908704-28908723 | MS.gene50990:intron | 30.0% |
| !!! | ACCCTTCTTATTTTCCTTTT+AGG | - | chr3.2:28910392-28910411 | MS.gene50990:intron | 30.0% |
| !!! | GTCATTATTTTTTCCGTTAG+TGG | - | chr3.2:28908662-28908681 | MS.gene50990:CDS | 30.0% |
| !!! | TGATCTGCATGTTGATTTTT+GGG | - | chr3.2:28908307-28908326 | MS.gene50990:intron | 30.0% |
| !!! | TTGATCTGCATGTTGATTTT+TGG | - | chr3.2:28908306-28908325 | MS.gene50990:intron | 30.0% |
| !!! | TTTTTTGAAAACTCGGTATC+CGG | + | chr3.2:28908219-28908238 | None:intergenic | 30.0% |
| AACACATTAATTGTCAGGAC+CGG | + | chr3.2:28908114-28908133 | None:intergenic | 35.0% | |
| AATACAATCGCCAGAAACAT+AGG | + | chr3.2:28908406-28908425 | None:intergenic | 35.0% | |
| ACAACTGGGGAAGATTAAAA+GGG | + | chr3.2:28909774-28909793 | None:intergenic | 35.0% | |
| ACGGGATTATAGTTCCTAAA+AGG | + | chr3.2:28910409-28910428 | None:intergenic | 35.0% | |
| AGCTAACCTGAGTTTCTATT+TGG | + | chr3.2:28910538-28910557 | None:intergenic | 35.0% | |
| AGGAGAAATGACTCTTTGTA+TGG | - | chr3.2:28911601-28911620 | MS.gene50990:intron | 35.0% | |
| ATATCGTTAGGTTTAGTGCA+TGG | - | chr3.2:28911528-28911547 | MS.gene50990:intron | 35.0% | |
| CAACAAGCTGAAAATTGCAA+AGG | - | chr3.2:28909148-28909167 | MS.gene50990:intron | 35.0% | |
| CATAGAAGTAGACATGATCA+CGG | + | chr3.2:28911369-28911388 | None:intergenic | 35.0% | |
| CGTAGATGAAATATCAGAAG+AGG | + | chr3.2:28909028-28909047 | None:intergenic | 35.0% | |
| CGTTACTGTGATTCTGTTAA+TGG | - | chr3.2:28910143-28910162 | MS.gene50990:intron | 35.0% | |
| CTAAGTCCAAATAGAAACTC+AGG | - | chr3.2:28910529-28910548 | MS.gene50990:intron | 35.0% | |
| GAGCTAATTTGATTACCATG+TGG | - | chr3.2:28910048-28910067 | MS.gene50990:intron | 35.0% | |
| GATAAGTCCAAATGCATGAA+TGG | + | chr3.2:28909331-28909350 | None:intergenic | 35.0% | |
| GATTGAGACATTGAAAACAC+AGG | + | chr3.2:28910915-28910934 | None:intergenic | 35.0% | |
| GTAGAAATGAGATTCTGAGT+TGG | - | chr3.2:28907855-28907874 | MS.gene50990:CDS | 35.0% | |
| GTCCTGACAATTAATGTGTT+GGG | - | chr3.2:28908114-28908133 | MS.gene50990:intron | 35.0% | |
| TACAACTGGGGAAGATTAAA+AGG | + | chr3.2:28909775-28909794 | None:intergenic | 35.0% | |
| TACAATTTCAAGAAACGCAG+GGG | + | chr3.2:28911709-28911728 | None:intergenic | 35.0% | |
| TACTGATCTCAAAATCTCAG+TGG | - | chr3.2:28911183-28911202 | MS.gene50990:intron | 35.0% | |
| TACTGTGATTCTGTTAATGG+TGG | - | chr3.2:28910146-28910165 | MS.gene50990:intron | 35.0% | |
| TATCGTTAGGTTTAGTGCAT+GGG | - | chr3.2:28911529-28911548 | MS.gene50990:intron | 35.0% | |
| TTCTAATACCTTCAATCGTC+TGG | - | chr3.2:28911456-28911475 | MS.gene50990:intron | 35.0% | |
| TTCTTCACACATTATCAAGC+TGG | + | chr3.2:28911752-28911771 | None:intergenic | 35.0% | |
| ! | AAGCAAGCCATCTCTTATTT+CGG | - | chr3.2:28908622-28908641 | MS.gene50990:CDS | 35.0% |
| ! | AATTGCATGTCTTTTATGCG+GGG | - | chr3.2:28909903-28909922 | MS.gene50990:intron | 35.0% |
| ! | ATGGATAGCGCATATTTTGT+CGG | - | chr3.2:28907833-28907852 | MS.gene50990:CDS | 35.0% |
| ! | CAATTGCATGTCTTTTATGC+GGG | - | chr3.2:28909902-28909921 | MS.gene50990:intron | 35.0% |
| ! | TACCTCTACATCTGACATTT+TGG | - | chr3.2:28911651-28911670 | MS.gene50990:intron | 35.0% |
| ! | TTTTCAAAGTTGTACCTGCT+TGG | + | chr3.2:28910702-28910721 | None:intergenic | 35.0% |
| !! | ACTACGAATAATACTGGTTC+AGG | - | chr3.2:28910502-28910521 | MS.gene50990:intron | 35.0% |
| !! | GAAGTTAACAGGCTTGTTAA+AGG | - | chr3.2:28910080-28910099 | MS.gene50990:intron | 35.0% |
| !! | TTTTAGGAACTATAATCCCG+TGG | - | chr3.2:28910408-28910427 | MS.gene50990:intron | 35.0% |
| !!! | ATTTTTGGGTGTTCACATTG+TGG | - | chr3.2:28908321-28908340 | MS.gene50990:intron | 35.0% |
| AACTTCAATATGCTGCCACA+TGG | + | chr3.2:28910066-28910085 | None:intergenic | 40.0% | |
| AAGATATCAAGGTCAACTGG+AGG | - | chr3.2:28910635-28910654 | MS.gene50990:intron | 40.0% | |
| ACAACTTGGAGTTCCTACAA+TGG | - | chr3.2:28910114-28910133 | MS.gene50990:intron | 40.0% | |
| ACAATCAATTTCGAGAGGCT+AGG | + | chr3.2:28908597-28908616 | None:intergenic | 40.0% | |
| ACAATTTCAAGAAACGCAGG+GGG | + | chr3.2:28911708-28911727 | None:intergenic | 40.0% | |
| ACAGGCATGTATATGCTATC+AGG | + | chr3.2:28910897-28910916 | None:intergenic | 40.0% | |
| ACCTGTAAGAATTCCAGCAA+AGG | - | chr3.2:28911291-28911310 | MS.gene50990:intron | 40.0% | |
| AGTAACGTTTCAGCCATTGT+AGG | + | chr3.2:28910130-28910149 | None:intergenic | 40.0% | |
| ATGAACACAGGGCATAAGAA+TGG | + | chr3.2:28908891-28908910 | None:intergenic | 40.0% | |
| ATGTTAGACATGACGTATCC+AGG | - | chr3.2:28908948-28908967 | MS.gene50990:intron | 40.0% | |
| CAAAATCTCAGTGGATCTCT+TGG | - | chr3.2:28911192-28911211 | MS.gene50990:intron | 40.0% | |
| CACACATTATCAAGCTGGAT+CGG | + | chr3.2:28911747-28911766 | None:intergenic | 40.0% | |
| CACCAAAATGTCAGATGTAG+AGG | + | chr3.2:28911656-28911675 | None:intergenic | 40.0% | |
| CATTTGATATGTCTCACCCT+AGG | - | chr3.2:28908277-28908296 | MS.gene50990:intron | 40.0% | |
| CCACAACAATCAATTTCGAG+AGG | + | chr3.2:28908602-28908621 | None:intergenic | 40.0% | |
| CCAGTTGACCTTGATATCTT+AGG | + | chr3.2:28910635-28910654 | None:intergenic | 40.0% | |
| CCTAAGATATCAAGGTCAAC+TGG | - | chr3.2:28910632-28910651 | MS.gene50990:intron | 40.0% | |
| CCTAGCAATGAATGAACACA+GGG | + | chr3.2:28908902-28908921 | None:intergenic | 40.0% | |
| CCTCTCGAAATTGATTGTTG+TGG | - | chr3.2:28908599-28908618 | MS.gene50990:CDS | 40.0% | |
| CTAGGGTGAGACATATCAAA+TGG | + | chr3.2:28908279-28908298 | None:intergenic | 40.0% | |
| CTTGGTTCCATTCATGCATT+TGG | - | chr3.2:28909321-28909340 | MS.gene50990:intron | 40.0% | |
| GACATCGATGATATTCCTGA+TGG | - | chr3.2:28910866-28910885 | MS.gene50990:intron | 40.0% | |
| GACATGCAATTGATGAAGGT+AGG | + | chr3.2:28909894-28909913 | None:intergenic | 40.0% | |
| GACCCAACACATTAATTGTC+AGG | + | chr3.2:28908119-28908138 | None:intergenic | 40.0% | |
| GAGATGCTTTCTACCACTAA+CGG | + | chr3.2:28908678-28908697 | None:intergenic | 40.0% | |
| GATACGTCATGTCTAACATC+TGG | + | chr3.2:28908947-28908966 | None:intergenic | 40.0% | |
| GATGTAGAGGTAGAAAACAC+AGG | + | chr3.2:28911643-28911662 | None:intergenic | 40.0% | |
| GGATCTGGAAATGCTAATGA+AGG | - | chr3.2:28909286-28909305 | MS.gene50990:intron | 40.0% | |
| GGCAGCATATTGAAGTTAAC+AGG | - | chr3.2:28910069-28910088 | MS.gene50990:intron | 40.0% | |
| GGTCCTGACAATTAATGTGT+TGG | - | chr3.2:28908113-28908132 | MS.gene50990:intron | 40.0% | |
| GTGCTCCCTAAGATAGTATA+TGG | - | chr3.2:28909440-28909459 | MS.gene50990:CDS | 40.0% | |
| GTGTAGGACCTAAGATATCA+AGG | - | chr3.2:28910624-28910643 | MS.gene50990:intron | 40.0% | |
| TAATCTCTCTCGCATTGAAG+AGG | - | chr3.2:28907898-28907917 | MS.gene50990:CDS | 40.0% | |
| TAATTCGTCAGCAGAGATTC+AGG | - | chr3.2:28910670-28910689 | MS.gene50990:intron | 40.0% | |
| TACATAGCTAAAGAAGCCCA+TGG | - | chr3.2:28910798-28910817 | MS.gene50990:intron | 40.0% | |
| TAGGTTTAGTGCATGGGATA+AGG | - | chr3.2:28911535-28911554 | MS.gene50990:intron | 40.0% | |
| TGTGCACTTATATGGGTGTT+TGG | - | chr3.2:28909359-28909378 | MS.gene50990:CDS | 40.0% | |
| TGTTAGACATGACGTATCCA+GGG | - | chr3.2:28908949-28908968 | MS.gene50990:intron | 40.0% | |
| TTTGATGGAGTACAAGGTTG+TGG | - | chr3.2:28909811-28909830 | MS.gene50990:intron | 40.0% | |
| ! | AGTTGGGCTTTAATGCTGAA+AGG | + | chr3.2:28910768-28910787 | None:intergenic | 40.0% |
| AAGTTGTACCTGCTTGGACA+AGG | + | chr3.2:28910696-28910715 | None:intergenic | 45.0% | |
| ACTCCAAGTTGTCCAAAGGT+CGG | + | chr3.2:28910106-28910125 | None:intergenic | 45.0% | |
| AGGAACTCCAAGTTGTCCAA+AGG | + | chr3.2:28910110-28910129 | None:intergenic | 45.0% | |
| AGTAGACATGATCACGGTCT+AGG | + | chr3.2:28911363-28911382 | None:intergenic | 45.0% | |
| ATCAAGGTCAACTGGAGGAT+CGG | - | chr3.2:28910640-28910659 | MS.gene50990:intron | 45.0% | |
| ATGCAGTACTCTTAGAAGCG+TGG | - | chr3.2:28911860-28911879 | MS.gene50990:intron | 45.0% | |
| ATTCATTGCTAGGCTGCATC+TGG | - | chr3.2:28908909-28908928 | MS.gene50990:intron | 45.0% | |
| CATTAATTGTCAGGACCGGA+AGG | + | chr3.2:28908110-28908129 | None:intergenic | 45.0% | |
| CCCTGTGTTCATTCATTGCT+AGG | - | chr3.2:28908899-28908918 | MS.gene50990:intron | 45.0% | |
| CTAAAGAGGAGCAGACTCTA+AGG | + | chr3.2:28908072-28908091 | None:intergenic | 45.0% | |
| CTTAGAGTCTGCTCCTCTTT+AGG | - | chr3.2:28908070-28908089 | MS.gene50990:intron | 45.0% | |
| GAAACACTCCAGACGATTGA+AGG | + | chr3.2:28911467-28911486 | None:intergenic | 45.0% | |
| GCCTAGCAATGAATGAACAC+AGG | + | chr3.2:28908903-28908922 | None:intergenic | 45.0% | |
| GCCTTTGCTGGAATTCTTAC+AGG | + | chr3.2:28911295-28911314 | None:intergenic | 45.0% | |
| GTACATGAACAAAGGGGCTT+TGG | + | chr3.2:28909715-28909734 | None:intergenic | 45.0% | |
| GTTAGACATGACGTATCCAG+GGG | - | chr3.2:28908950-28908969 | MS.gene50990:intron | 45.0% | |
| TCTATGCCAGACATCAGAAC+TGG | - | chr3.2:28911261-28911280 | MS.gene50990:intron | 45.0% | |
| TGCAAAAGAGTCGGCATTAG+AGG | - | chr3.2:28911974-28911993 | MS.gene50990:CDS | 45.0% | |
| TGCTGCTGATGCAAAAGAGT+CGG | - | chr3.2:28911965-28911984 | MS.gene50990:CDS | 45.0% | |
| TGGGGAAGATTAAAAGGGCA+AGG | + | chr3.2:28909769-28909788 | None:intergenic | 45.0% | |
| TTCGAACCTGAGACCTAAAG+AGG | + | chr3.2:28908086-28908105 | None:intergenic | 45.0% | |
| ! | CATTCTCCAGTTCTGATGTC+TGG | + | chr3.2:28911270-28911289 | None:intergenic | 45.0% |
| ! | TGGGCTTTAATGCTGAAAGG+AGG | + | chr3.2:28910765-28910784 | None:intergenic | 45.0% |
| ! | TGTGTTGCTACCTTGTGCAT+CGG | + | chr3.2:28908981-28909000 | None:intergenic | 45.0% |
| !! | TGTTGCACTAGCTGGTCTTT+GGG | - | chr3.2:28908193-28908212 | MS.gene50990:intron | 45.0% |
| !! | TTGTTGCACTAGCTGGTCTT+TGG | - | chr3.2:28908192-28908211 | MS.gene50990:intron | 45.0% |
| !! | ATAATTTAATGAAAAAATTA+TGG | - | chr3.2:28910991-28911010 | MS.gene50990:intron | 5.0% |
| !!! | AATTAAAAGTAATTTATTTT+CGG | - | chr3.2:28909944-28909963 | MS.gene50990:intron | 5.0% |
| ACCCTTAATCCTACGCTCCA+CGG | + | chr3.2:28910428-28910447 | None:intergenic | 50.0% | |
| ACTACACTGCAAGCCTTTGC+TGG | + | chr3.2:28911307-28911326 | None:intergenic | 50.0% | |
| ACTATAATCCCGTGGAGCGT+AGG | - | chr3.2:28910416-28910435 | MS.gene50990:intron | 50.0% | |
| GCGTAGGATTAAGGGTGGAA+AGG | - | chr3.2:28910432-28910451 | MS.gene50990:intron | 50.0% | |
| GGCGACGAGTATAGGGATAA+TGG | - | chr3.2:28907814-28907833 | MS.gene50990:CDS | 50.0% | |
| GGGGAGAAACTCATAAGCTC+TGG | + | chr3.2:28909543-28909562 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGAATCCTTC+CGG | - | chr3.2:28908092-28908111 | MS.gene50990:intron | 50.0% | |
| TCTGCTCCTCTTTAGGTCTC+AGG | - | chr3.2:28908077-28908096 | MS.gene50990:intron | 50.0% | |
| ! | GCTTGTTAAAGGCCGACCTT+TGG | - | chr3.2:28910091-28910110 | MS.gene50990:intron | 50.0% |
| ! | TGCTATCAGGTGCTACCATC+AGG | + | chr3.2:28910884-28910903 | None:intergenic | 50.0% |
| AGGCCGACCTTTGGACAACT+TGG | - | chr3.2:28910100-28910119 | MS.gene50990:intron | 55.0% | |
| AGGTCAACTGGAGGATCGGA+TGG | - | chr3.2:28910644-28910663 | MS.gene50990:intron | 55.0% | |
| CCCGTGGAGCGTAGGATTAA+GGG | - | chr3.2:28910424-28910443 | MS.gene50990:intron | 55.0% | |
| CCCTTAATCCTACGCTCCAC+GGG | + | chr3.2:28910427-28910446 | None:intergenic | 55.0% | |
| GGTCAACTGGAGGATCGGAT+GGG | - | chr3.2:28910645-28910664 | MS.gene50990:intron | 55.0% | |
| GTCAACTGGAGGATCGGATG+GGG | - | chr3.2:28910646-28910665 | MS.gene50990:intron | 55.0% | |
| GTCGGCATTAGAGGAAGCTC+AGG | - | chr3.2:28911983-28912002 | MS.gene50990:CDS | 55.0% | |
| GTGGAGCGTAGGATTAAGGG+TGG | - | chr3.2:28910427-28910446 | MS.gene50990:intron | 55.0% | |
| TCCCGTGGAGCGTAGGATTA+AGG | - | chr3.2:28910423-28910442 | MS.gene50990:intron | 55.0% | |
| TTAATTGAGCCCCCCGCTAG+TGG | - | chr3.2:28908160-28908179 | MS.gene50990:intron | 55.0% | |
| ! | GATTCAGGCCTTGTCCAAGC+AGG | - | chr3.2:28910685-28910704 | MS.gene50990:intron | 55.0% |
| ACAATCCCGCCCTCCACTAG+CGG | + | chr3.2:28908176-28908195 | None:intergenic | 60.0% | |
| GGCGGGATTGTTGCACTAGC+TGG | - | chr3.2:28908185-28908204 | MS.gene50990:intron | 60.0% | |
| ! | AGGGGTTGTGCCGATGCACA+AGG | - | chr3.2:28908968-28908987 | MS.gene50990:intron | 60.0% |
| ! | TTGTGCATCGGCACAACCCC+TGG | + | chr3.2:28908969-28908988 | None:intergenic | 60.0% |
| !! | GCACTAGCTGGTCTTTGGGC+CGG | - | chr3.2:28908197-28908216 | MS.gene50990:intron | 60.0% |
| AATCCCGCCCTCCACTAGCG+GGG | + | chr3.2:28908174-28908193 | None:intergenic | 65.0% | |
| ATTGAGCCCCCCGCTAGTGG+AGG | - | chr3.2:28908163-28908182 | MS.gene50990:intron | 65.0% | |
| CAATCCCGCCCTCCACTAGC+GGG | + | chr3.2:28908175-28908194 | None:intergenic | 65.0% | |
| TTGAGCCCCCCGCTAGTGGA+GGG | - | chr3.2:28908164-28908183 | MS.gene50990:intron | 65.0% | |
| ATCCCGCCCTCCACTAGCGG+GGG | + | chr3.2:28908173-28908192 | None:intergenic | 70.0% | |
| AGCCCCCCGCTAGTGGAGGG+CGG | - | chr3.2:28908167-28908186 | MS.gene50990:intron | 75.0% | |
| TCCCGCCCTCCACTAGCGGG+GGG | + | chr3.2:28908172-28908191 | None:intergenic | 75.0% | |
| ! | GCCCCCCGCTAGTGGAGGGC+GGG | - | chr3.2:28908168-28908187 | MS.gene50990:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 28907812 | 28912061 | 28907812 | ID=MS.gene50990 |
| chr3.2 | mRNA | 28907812 | 28912061 | 28907812 | ID=MS.gene50990.t1;Parent=MS.gene50990 |
| chr3.2 | exon | 28911954 | 28912061 | 28911954 | ID=MS.gene50990.t1.exon1;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28911954 | 28912061 | 28911954 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| chr3.2 | exon | 28910884 | 28910952 | 28910884 | ID=MS.gene50990.t1.exon2;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28910884 | 28910952 | 28910884 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| chr3.2 | exon | 28910704 | 28910790 | 28910704 | ID=MS.gene50990.t1.exon3;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28910704 | 28910790 | 28910704 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| chr3.2 | exon | 28909693 | 28909799 | 28909693 | ID=MS.gene50990.t1.exon4;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28909693 | 28909799 | 28909693 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| chr3.2 | exon | 28909323 | 28909459 | 28909323 | ID=MS.gene50990.t1.exon5;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28909323 | 28909459 | 28909323 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| chr3.2 | exon | 28909167 | 28909243 | 28909167 | ID=MS.gene50990.t1.exon6;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28909167 | 28909243 | 28909167 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| chr3.2 | exon | 28908579 | 28908692 | 28908579 | ID=MS.gene50990.t1.exon7;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28908579 | 28908692 | 28908579 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| chr3.2 | exon | 28907812 | 28907937 | 28907812 | ID=MS.gene50990.t1.exon8;Parent=MS.gene50990.t1 |
| chr3.2 | CDS | 28907812 | 28907937 | 28907812 | ID=cds.MS.gene50990.t1;Parent=MS.gene50990.t1 |
| Gene Sequence |
| Protein sequence |
