Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020771.t1 | XP_003617791.1 | 99.3 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 9.00E-158 | 566.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020771.t1 | Q69ZQ2 | 49.2 | 299 | 136 | 6 | 1 | 299 | 1 | 283 | 9.0e-58 | 225.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020771.t1 | G7K4N4 | 99.3 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 6.5e-158 | 566.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020771 | MS.gene53517 | PPI |
| MS.gene020771 | MS.gene053443 | PPI |
| MS.gene020771 | MS.gene66321 | PPI |
| MS.gene020771 | MS.gene022597 | PPI |
| MS.gene020771 | MS.gene032681 | PPI |
| MS.gene020771 | MS.gene072740 | PPI |
| MS.gene020771 | MS.gene82776 | PPI |
| MS.gene020771 | MS.gene073888 | PPI |
| MS.gene020771 | MS.gene01351 | PPI |
| MS.gene053099 | MS.gene020771 | PPI |
| MS.gene020771 | MS.gene002376 | PPI |
| MS.gene020771 | MS.gene047509 | PPI |
| MS.gene020771 | MS.gene22321 | PPI |
| MS.gene020771 | MS.gene064051 | PPI |
| MS.gene020771 | MS.gene030285 | PPI |
| MS.gene020771 | MS.gene024669 | PPI |
| MS.gene020771 | MS.gene21651 | PPI |
| MS.gene020771 | MS.gene66329 | PPI |
| MS.gene020771 | MS.gene75072 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020771.t1 | MTR_5g095510 | 99.340 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020771.t1 | AT3G18790 | 76.238 | 303 | 69 | 2 | 1 | 303 | 1 | 300 | 1.84e-149 | 421 |
Find 94 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGCTTATTATGGTTAT+AGG | 0.163690 | 5.4:-74759910 | MS.gene020771:CDS |
| AGGATTAATGCTGCTTATTA+TGG | 0.220615 | 5.4:-74759917 | MS.gene020771:CDS |
| AGAAAAGGACGGCGTTCTTT+AGG | 0.280108 | 5.4:+74760322 | None:intergenic |
| TGCTGCTTATTATGGTTATA+GGG | 0.299741 | 5.4:-74759909 | MS.gene020771:CDS |
| GGATGATGAAGATGGGATAT+TGG | 0.324169 | 5.4:-74759888 | MS.gene020771:CDS |
| GGGCCGGGGTATAGATATTT+TGG | 0.329847 | 5.4:-74760028 | MS.gene020771:CDS |
| GAGGGAGATGAGGGAGAGGT+TGG | 0.336839 | 5.4:-74759675 | MS.gene020771:CDS |
| TTCGTTGAGGTCACGGCATT+CGG | 0.348118 | 5.4:+74760294 | None:intergenic |
| GCTGAATGCCTTGCGTAATT+CGG | 0.361089 | 5.4:+74760106 | None:intergenic |
| TTCAGCGAAAATGACTGATT+TGG | 0.362490 | 5.4:-74760089 | MS.gene020771:CDS |
| GTATGTCAGTGATGAGCTTA+TGG | 0.373343 | 5.4:-74759552 | MS.gene020771:CDS |
| TGTTGTGCATGTGCCGTTGC+CGG | 0.394519 | 5.4:-74759633 | MS.gene020771:CDS |
| GAGAGGAGAATTGTTGAACT+TGG | 0.401681 | 5.4:-74760133 | MS.gene020771:CDS |
| TTTGAATCTCGGCGACTTTG+CGG | 0.401696 | 5.4:+74760233 | None:intergenic |
| GGGAGAGGTTGGATAGGATA+AGG | 0.401870 | 5.4:-74759811 | MS.gene020771:CDS |
| AGAAGAGGATGTGGTGGAGG+AGG | 0.404204 | 5.4:-74759711 | MS.gene020771:CDS |
| CAGCAAATCATGCGTGAAAT+CGG | 0.409841 | 5.4:-74760256 | MS.gene020771:CDS |
| GATTTGCTGACGCCATTTGT+CGG | 0.414253 | 5.4:+74760270 | None:intergenic |
| AGCCGCCGGAGTTGAGGAAA+AGG | 0.414891 | 5.4:-74759964 | MS.gene020771:CDS |
| ATTGGAGCGGGTTGAGGCAC+CGG | 0.422542 | 5.4:-74759870 | MS.gene020771:CDS |
| GATGAAGGAGAGGGAGATGA+GGG | 0.439819 | 5.4:-74759684 | MS.gene020771:CDS |
| GGTTGAGGAGTGGGAGAGGT+TGG | 0.442822 | 5.4:-74759822 | MS.gene020771:CDS |
| GGAAGAAGAGGATGTGGTGG+AGG | 0.450447 | 5.4:-74759714 | MS.gene020771:CDS |
| TTCTCAATCTCCTTCTCATC+CGG | 0.450854 | 5.4:+74759614 | None:intergenic |
| CGAGATATGATATTTATAAG+AGG | 0.453995 | 5.4:-74759937 | MS.gene020771:CDS |
| GCGGGTTGAGGCACCGGCTG+AGG | 0.458475 | 5.4:-74759864 | MS.gene020771:CDS |
| CTAGGAAGGCTGTGAGGAGT+GGG | 0.459243 | 5.4:-74759781 | MS.gene020771:CDS |
| ACCTCAACGAAGCCGACAAA+TGG | 0.465609 | 5.4:-74760282 | MS.gene020771:CDS |
| TGAGAAGGAGATTGAGAAGA+TGG | 0.468803 | 5.4:-74759609 | MS.gene020771:CDS |
| GGATGAAGGAGAGGGAGATG+AGG | 0.468850 | 5.4:-74759685 | MS.gene020771:CDS |
| ATAGGATAAGGAAGGAAGCT+AGG | 0.470791 | 5.4:-74759799 | MS.gene020771:CDS |
| TATGAGACGTGAGGCGGTTG+AGG | 0.478918 | 5.4:-74759837 | MS.gene020771:CDS |
| AGAGGTTGGATGAGAAAGAG+AGG | 0.481023 | 5.4:-74759661 | MS.gene020771:CDS |
| GGAGGAGAGGATGAAGGAGA+GGG | 0.481673 | 5.4:-74759693 | MS.gene020771:CDS |
| AGGAGAGGGAGATGAGGGAG+AGG | 0.482030 | 5.4:-74759679 | MS.gene020771:CDS |
| GAGGAGTGGGGAGGTTGTTG+AGG | 0.482912 | 5.4:-74759768 | MS.gene020771:CDS |
| TGTCGGCTTCGTTGAGGTCA+CGG | 0.485850 | 5.4:+74760287 | None:intergenic |
| TGGGATATTGGAGCGGGTTG+AGG | 0.487195 | 5.4:-74759876 | MS.gene020771:CDS |
| AGGATGTGGTGGAGGAGGAG+AGG | 0.489002 | 5.4:-74759706 | MS.gene020771:CDS |
| GGTGGAGGAGGAGAGGATGA+AGG | 0.490815 | 5.4:-74759699 | MS.gene020771:CDS |
| GGTTATAGGGATGATGAAGA+TGG | 0.495151 | 5.4:-74759896 | MS.gene020771:CDS |
| TGGTGCGGCGAAGAAATTGC+CGG | 0.497574 | 5.4:-74760008 | MS.gene020771:CDS |
| AGGAGTGGGAGAGGTTGGAT+AGG | 0.498229 | 5.4:-74759817 | MS.gene020771:CDS |
| GGTGCGGCGAAGAAATTGCC+GGG | 0.501210 | 5.4:-74760007 | MS.gene020771:CDS |
| ACGTGAGGCGGTTGAGGAGT+GGG | 0.503478 | 5.4:-74759831 | MS.gene020771:CDS |
| GCGAAAATGACTGATTTGGA+TGG | 0.507223 | 5.4:-74760085 | MS.gene020771:CDS |
| AGAAGACGGATTTGTTGAAT+CGG | 0.512072 | 5.4:-74759574 | MS.gene020771:CDS |
| CGGCATTCGGAAGCGAGAAA+AGG | 0.513747 | 5.4:+74760307 | None:intergenic |
| TGAGGAAGAAGAGGATGTGG+TGG | 0.519928 | 5.4:-74759717 | MS.gene020771:CDS |
| ATGAAGATGGGATATTGGAG+CGG | 0.526437 | 5.4:-74759883 | MS.gene020771:CDS |
| TTGAGAAGCCGCCGGAGTTG+AGG | 0.534679 | 5.4:-74759970 | MS.gene020771:CDS |
| GATAAGGAAGGAAGCTAGGA+AGG | 0.534959 | 5.4:-74759795 | MS.gene020771:CDS |
| TTGAGGTTACTGCGGCTACG+AGG | 0.542022 | 5.4:-74759751 | MS.gene020771:CDS |
| GATTCTTCATGAGGAAGAAG+AGG | 0.543489 | 5.4:-74759726 | MS.gene020771:CDS |
| AGGAGGAGAGGATGAAGGAG+AGG | 0.544445 | 5.4:-74759694 | MS.gene020771:CDS |
| GCTAGGAAGGCTGTGAGGAG+TGG | 0.544777 | 5.4:-74759782 | MS.gene020771:CDS |
| AGGCGGTTGAGGAGTGGGAG+AGG | 0.545126 | 5.4:-74759826 | MS.gene020771:CDS |
| GAGATTCAAAACGAAGGTCT+CGG | 0.546527 | 5.4:-74760220 | MS.gene020771:CDS |
| GTTATAGGGATGATGAAGAT+GGG | 0.553326 | 5.4:-74759895 | MS.gene020771:CDS |
| GTACCTAACCCTAGTGGAAG+GGG | 0.553996 | 5.4:-74760049 | MS.gene020771:CDS |
| GAGGTTGGATAGGATAAGGA+AGG | 0.556697 | 5.4:-74759807 | MS.gene020771:CDS |
| CGAAAATGACTGATTTGGAT+GGG | 0.568145 | 5.4:-74760084 | MS.gene020771:CDS |
| CGTCTCATACATTCCTCAGC+CGG | 0.570966 | 5.4:+74759851 | None:intergenic |
| GACGTGAGGCGGTTGAGGAG+TGG | 0.572067 | 5.4:-74759832 | MS.gene020771:CDS |
| GAGGTTGGATGAGAAAGAGA+GGG | 0.574959 | 5.4:-74759660 | MS.gene020771:CDS |
| ATCTCCTTCTCATCCGGCAA+CGG | 0.576259 | 5.4:+74759620 | None:intergenic |
| TCATGAGGAAGAAGAGGATG+TGG | 0.577905 | 5.4:-74759720 | MS.gene020771:CDS |
| GCCATTTGTCGGCTTCGTTG+AGG | 0.579484 | 5.4:+74760281 | None:intergenic |
| AGGAGAATTGTTGAACTTGG+AGG | 0.585154 | 5.4:-74760130 | MS.gene020771:CDS |
| GGAGGAGCAGACTGAAGCTA+AGG | 0.586889 | 5.4:-74759531 | MS.gene020771:CDS |
| ATGTACCTAACCCTAGTGGA+AGG | 0.590388 | 5.4:-74760051 | MS.gene020771:CDS |
| TGAAGATGGGATATTGGAGC+GGG | 0.592242 | 5.4:-74759882 | MS.gene020771:CDS |
| TGTGCCGTTGCCGGATGAGA+AGG | 0.605428 | 5.4:-74759624 | MS.gene020771:CDS |
| CGCCGGAGTTGAGGAAAAGG+AGG | 0.608952 | 5.4:-74759961 | MS.gene020771:CDS |
| TAGGAAGGCTGTGAGGAGTG+GGG | 0.611922 | 5.4:-74759780 | MS.gene020771:CDS |
| TGAGGTTACTGCGGCTACGA+GGG | 0.625438 | 5.4:-74759750 | MS.gene020771:CDS |
| GTGCGGCGAAGAAATTGCCG+GGG | 0.629933 | 5.4:-74760006 | MS.gene020771:CDS |
| TACGAGGGAGATTCTTCATG+AGG | 0.631904 | 5.4:-74759735 | MS.gene020771:CDS |
| TGTACCTAACCCTAGTGGAA+GGG | 0.631935 | 5.4:-74760050 | MS.gene020771:CDS |
| ATTCGGAAGCGAGAAAAGGA+CGG | 0.632653 | 5.4:+74760311 | None:intergenic |
| CGTCGTTGAGATCACGAAGA+CGG | 0.646415 | 5.4:+74760191 | None:intergenic |
| GAAGGCTGTGAGGAGTGGGG+AGG | 0.648471 | 5.4:-74759777 | MS.gene020771:CDS |
| GCACCAAAATATCTATACCC+CGG | 0.652148 | 5.4:+74760025 | None:intergenic |
| GGTGTTGCAGAAGAAGAAGA+CGG | 0.654804 | 5.4:-74759588 | MS.gene020771:CDS |
| TTGGAGGACCGAATTACGCA+AGG | 0.663818 | 5.4:-74760114 | MS.gene020771:CDS |
| GTCGCCGAGATTCAAAACGA+AGG | 0.671719 | 5.4:-74760226 | MS.gene020771:CDS |
| TGAGGAATGTATGAGACGTG+AGG | 0.679862 | 5.4:-74759846 | MS.gene020771:CDS |
| TGCGGCGAAGAAATTGCCGG+GGG | 0.684263 | 5.4:-74760005 | MS.gene020771:CDS |
| TGTCAGTGATGAGCTTATGG+AGG | 0.691036 | 5.4:-74759549 | MS.gene020771:CDS |
| TACCTAACCCTAGTGGAAGG+GGG | 0.694550 | 5.4:-74760048 | MS.gene020771:CDS |
| GTTGATGTACCTAACCCTAG+TGG | 0.694718 | 5.4:-74760055 | MS.gene020771:CDS |
| GGAGGTTGTTGAGGTTACTG+CGG | 0.696634 | 5.4:-74759759 | MS.gene020771:CDS |
| AGGAAGCTAGGAAGGCTGTG+AGG | 0.701271 | 5.4:-74759787 | MS.gene020771:CDS |
| GGAATGTATGAGACGTGAGG+CGG | 0.759199 | 5.4:-74759843 | MS.gene020771:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CGAGATATGATATTTATAAG+AGG | - | chr5.4:74759968-74759987 | MS.gene020771:CDS | 25.0% |
| ! | AGGATTAATGCTGCTTATTA+TGG | - | chr5.4:74759988-74760007 | MS.gene020771:CDS | 30.0% |
| ! | ATGCTGCTTATTATGGTTAT+AGG | - | chr5.4:74759995-74760014 | MS.gene020771:CDS | 30.0% |
| ! | TGCTGCTTATTATGGTTATA+GGG | - | chr5.4:74759996-74760015 | MS.gene020771:CDS | 30.0% |
| GATTCGTGAAAAATCGCATT+GGG | - | chr5.4:74759750-74759769 | MS.gene020771:CDS | 35.0% | |
| GTTATAGGGATGATGAAGAT+GGG | - | chr5.4:74760010-74760029 | MS.gene020771:CDS | 35.0% | |
| TGATTCGTGAAAAATCGCAT+TGG | - | chr5.4:74759749-74759768 | MS.gene020771:CDS | 35.0% | |
| TTCAGCGAAAATGACTGATT+TGG | - | chr5.4:74759816-74759835 | MS.gene020771:CDS | 35.0% | |
| ! | CTTCTTTTCTTCAGCTTTCA+TGG | + | chr5.4:74759560-74759579 | None:intergenic | 35.0% |
| !! | AGAAGACGGATTTGTTGAAT+CGG | - | chr5.4:74760331-74760350 | MS.gene020771:CDS | 35.0% |
| !! | CGAAAATGACTGATTTGGAT+GGG | - | chr5.4:74759821-74759840 | MS.gene020771:CDS | 35.0% |
| AGGAGAATTGTTGAACTTGG+AGG | - | chr5.4:74759775-74759794 | MS.gene020771:CDS | 40.0% | |
| ATAGGATAAGGAAGGAAGCT+AGG | - | chr5.4:74760106-74760125 | MS.gene020771:CDS | 40.0% | |
| ATGAAGATGGGATATTGGAG+CGG | - | chr5.4:74760022-74760041 | MS.gene020771:CDS | 40.0% | |
| CAGCAAATCATGCGTGAAAT+CGG | - | chr5.4:74759649-74759668 | MS.gene020771:CDS | 40.0% | |
| GAGAGGAGAATTGTTGAACT+TGG | - | chr5.4:74759772-74759791 | MS.gene020771:CDS | 40.0% | |
| GAGATTCAAAACGAAGGTCT+CGG | - | chr5.4:74759685-74759704 | MS.gene020771:CDS | 40.0% | |
| GATTCTTCATGAGGAAGAAG+AGG | - | chr5.4:74760179-74760198 | MS.gene020771:CDS | 40.0% | |
| GCACCAAAATATCTATACCC+CGG | + | chr5.4:74759883-74759902 | None:intergenic | 40.0% | |
| GGATGATGAAGATGGGATAT+TGG | - | chr5.4:74760017-74760036 | MS.gene020771:CDS | 40.0% | |
| GGTTATAGGGATGATGAAGA+TGG | - | chr5.4:74760009-74760028 | MS.gene020771:CDS | 40.0% | |
| GTATGTCAGTGATGAGCTTA+TGG | - | chr5.4:74760353-74760372 | MS.gene020771:CDS | 40.0% | |
| TGAGAAGGAGATTGAGAAGA+TGG | - | chr5.4:74760296-74760315 | MS.gene020771:CDS | 40.0% | |
| TTCTCAATCTCCTTCTCATC+CGG | + | chr5.4:74760294-74760313 | None:intergenic | 40.0% | |
| !! | GAGACCTTCGTTTTGAATCT+CGG | + | chr5.4:74759686-74759705 | None:intergenic | 40.0% |
| !! | GCGAAAATGACTGATTTGGA+TGG | - | chr5.4:74759820-74759839 | MS.gene020771:CDS | 40.0% |
| !!! | GGGGTATAGATATTTTGGTG+CGG | - | chr5.4:74759882-74759901 | MS.gene020771:CDS | 40.0% |
| AGAAAAGGACGGCGTTCTTT+AGG | + | chr5.4:74759586-74759605 | None:intergenic | 45.0% | |
| AGAGGTTGGATGAGAAAGAG+AGG | - | chr5.4:74760244-74760263 | MS.gene020771:CDS | 45.0% | |
| ATGTACCTAACCCTAGTGGA+AGG | - | chr5.4:74759854-74759873 | MS.gene020771:CDS | 45.0% | |
| ATTCGGAAGCGAGAAAAGGA+CGG | + | chr5.4:74759597-74759616 | None:intergenic | 45.0% | |
| GAGGTTGGATAGGATAAGGA+AGG | - | chr5.4:74760098-74760117 | MS.gene020771:CDS | 45.0% | |
| GAGGTTGGATGAGAAAGAGA+GGG | - | chr5.4:74760245-74760264 | MS.gene020771:CDS | 45.0% | |
| GATAAGGAAGGAAGCTAGGA+AGG | - | chr5.4:74760110-74760129 | MS.gene020771:CDS | 45.0% | |
| GCTGAATGCCTTGCGTAATT+CGG | + | chr5.4:74759802-74759821 | None:intergenic | 45.0% | |
| GTGAAAAATCGCATTGGGAG+AGG | - | chr5.4:74759755-74759774 | MS.gene020771:CDS | 45.0% | |
| GTTGATGTACCTAACCCTAG+TGG | - | chr5.4:74759850-74759869 | MS.gene020771:CDS | 45.0% | |
| TACGAGGGAGATTCTTCATG+AGG | - | chr5.4:74760170-74760189 | MS.gene020771:CDS | 45.0% | |
| TCATGAGGAAGAAGAGGATG+TGG | - | chr5.4:74760185-74760204 | MS.gene020771:CDS | 45.0% | |
| TGAAGATGGGATATTGGAGC+GGG | - | chr5.4:74760023-74760042 | MS.gene020771:CDS | 45.0% | |
| TGAGGAATGTATGAGACGTG+AGG | - | chr5.4:74760059-74760078 | MS.gene020771:CDS | 45.0% | |
| TGTACCTAACCCTAGTGGAA+GGG | - | chr5.4:74759855-74759874 | MS.gene020771:CDS | 45.0% | |
| TGTCAGTGATGAGCTTATGG+AGG | - | chr5.4:74760356-74760375 | MS.gene020771:CDS | 45.0% | |
| TTTGAATCTCGGCGACTTTG+CGG | + | chr5.4:74759675-74759694 | None:intergenic | 45.0% | |
| ! | GGTGTTGCAGAAGAAGAAGA+CGG | - | chr5.4:74760317-74760336 | MS.gene020771:CDS | 45.0% |
| !! | GATTTGCTGACGCCATTTGT+CGG | + | chr5.4:74759638-74759657 | None:intergenic | 45.0% |
| ACCTCAACGAAGCCGACAAA+TGG | - | chr5.4:74759623-74759642 | MS.gene020771:CDS | 50.0% | |
| ATCTCCTTCTCATCCGGCAA+CGG | + | chr5.4:74760288-74760307 | None:intergenic | 50.0% | |
| CGTCGTTGAGATCACGAAGA+CGG | + | chr5.4:74759717-74759736 | None:intergenic | 50.0% | |
| CGTCTCATACATTCCTCAGC+CGG | + | chr5.4:74760057-74760076 | None:intergenic | 50.0% | |
| GAAGAAATTGCCGGGGGTTA+GGG | - | chr5.4:74759906-74759925 | MS.gene020771:CDS | 50.0% | |
| GATGAAGGAGAGGGAGATGA+GGG | - | chr5.4:74760221-74760240 | MS.gene020771:CDS | 50.0% | |
| GGAATGTATGAGACGTGAGG+CGG | - | chr5.4:74760062-74760081 | MS.gene020771:CDS | 50.0% | |
| GGAGGTTGTTGAGGTTACTG+CGG | - | chr5.4:74760146-74760165 | MS.gene020771:CDS | 50.0% | |
| GGGAGAGGTTGGATAGGATA+AGG | - | chr5.4:74760094-74760113 | MS.gene020771:CDS | 50.0% | |
| GTACCTAACCCTAGTGGAAG+GGG | - | chr5.4:74759856-74759875 | MS.gene020771:CDS | 50.0% | |
| GTCGCCGAGATTCAAAACGA+AGG | - | chr5.4:74759679-74759698 | MS.gene020771:CDS | 50.0% | |
| TACCTAACCCTAGTGGAAGG+GGG | - | chr5.4:74759857-74759876 | MS.gene020771:CDS | 50.0% | |
| TCAAAAAGCTCCCTAACCCC+CGG | + | chr5.4:74759919-74759938 | None:intergenic | 50.0% | |
| TGAGGAAGAAGAGGATGTGG+TGG | - | chr5.4:74760188-74760207 | MS.gene020771:CDS | 50.0% | |
| TTCGTTGAGGTCACGGCATT+CGG | + | chr5.4:74759614-74759633 | None:intergenic | 50.0% | |
| TTGGAGGACCGAATTACGCA+AGG | - | chr5.4:74759791-74759810 | MS.gene020771:CDS | 50.0% | |
| ! | GGGCCGGGGTATAGATATTT+TGG | - | chr5.4:74759877-74759896 | MS.gene020771:CDS | 50.0% |
| ! | GTCCTCCTTTTCCTCAACTC+CGG | + | chr5.4:74759949-74759968 | None:intergenic | 50.0% |
| AGGAAGCTAGGAAGGCTGTG+AGG | - | chr5.4:74760118-74760137 | MS.gene020771:CDS | 55.0% | |
| AGGAGGAGAGGATGAAGGAG+AGG | - | chr5.4:74760211-74760230 | MS.gene020771:CDS | 55.0% | |
| AGGAGTGGGAGAGGTTGGAT+AGG | - | chr5.4:74760088-74760107 | MS.gene020771:CDS | 55.0% | |
| CGAAGAAATTGCCGGGGGTT+AGG | - | chr5.4:74759905-74759924 | MS.gene020771:CDS | 55.0% | |
| CGGCATTCGGAAGCGAGAAA+AGG | + | chr5.4:74759601-74759620 | None:intergenic | 55.0% | |
| CTAGGAAGGCTGTGAGGAGT+GGG | - | chr5.4:74760124-74760143 | MS.gene020771:CDS | 55.0% | |
| GGAAGAAGAGGATGTGGTGG+AGG | - | chr5.4:74760191-74760210 | MS.gene020771:CDS | 55.0% | |
| GGAGGAGAGGATGAAGGAGA+GGG | - | chr5.4:74760212-74760231 | MS.gene020771:CDS | 55.0% | |
| GGAGGAGCAGACTGAAGCTA+AGG | - | chr5.4:74760374-74760393 | MS.gene020771:CDS | 55.0% | |
| GGATGAAGGAGAGGGAGATG+AGG | - | chr5.4:74760220-74760239 | MS.gene020771:CDS | 55.0% | |
| TAGGAAGGCTGTGAGGAGTG+GGG | - | chr5.4:74760125-74760144 | MS.gene020771:CDS | 55.0% | |
| TATGAGACGTGAGGCGGTTG+AGG | - | chr5.4:74760068-74760087 | MS.gene020771:CDS | 55.0% | |
| TGAGGTTACTGCGGCTACGA+GGG | - | chr5.4:74760155-74760174 | MS.gene020771:CDS | 55.0% | |
| TGGTGCGGCGAAGAAATTGC+CGG | - | chr5.4:74759897-74759916 | MS.gene020771:CDS | 55.0% | |
| TTGAGGTTACTGCGGCTACG+AGG | - | chr5.4:74760154-74760173 | MS.gene020771:CDS | 55.0% | |
| ! | AGAAGAGGATGTGGTGGAGG+AGG | - | chr5.4:74760194-74760213 | MS.gene020771:CDS | 55.0% |
| ! | CTCCTTTTCCTCAACTCCGG+CGG | + | chr5.4:74759946-74759965 | None:intergenic | 55.0% |
| ! | TGTTGTGCATGTGCCGTTGC+CGG | - | chr5.4:74760272-74760291 | MS.gene020771:CDS | 55.0% |
| !! | GCCATTTGTCGGCTTCGTTG+AGG | + | chr5.4:74759627-74759646 | None:intergenic | 55.0% |
| !! | GGAGCTTTTTGAGAAGCCGC+CGG | - | chr5.4:74759927-74759946 | MS.gene020771:CDS | 55.0% |
| !! | TGGGATATTGGAGCGGGTTG+AGG | - | chr5.4:74760029-74760048 | MS.gene020771:CDS | 55.0% |
| !! | TGTCGGCTTCGTTGAGGTCA+CGG | + | chr5.4:74759621-74759640 | None:intergenic | 55.0% |
| ACGTGAGGCGGTTGAGGAGT+GGG | - | chr5.4:74760074-74760093 | MS.gene020771:CDS | 60.0% | |
| AGCCGCCGGAGTTGAGGAAA+AGG | - | chr5.4:74759941-74759960 | MS.gene020771:CDS | 60.0% | |
| AGGAGAGGGAGATGAGGGAG+AGG | - | chr5.4:74760226-74760245 | MS.gene020771:CDS | 60.0% | |
| CGCCGGAGTTGAGGAAAAGG+AGG | - | chr5.4:74759944-74759963 | MS.gene020771:CDS | 60.0% | |
| GAGGAGTGGGGAGGTTGTTG+AGG | - | chr5.4:74760137-74760156 | MS.gene020771:CDS | 60.0% | |
| GAGGGAGATGAGGGAGAGGT+TGG | - | chr5.4:74760230-74760249 | MS.gene020771:CDS | 60.0% | |
| GCTAGGAAGGCTGTGAGGAG+TGG | - | chr5.4:74760123-74760142 | MS.gene020771:CDS | 60.0% | |
| GGTGCGGCGAAGAAATTGCC+GGG | - | chr5.4:74759898-74759917 | MS.gene020771:CDS | 60.0% | |
| GGTGGAGGAGGAGAGGATGA+AGG | - | chr5.4:74760206-74760225 | MS.gene020771:CDS | 60.0% | |
| GGTTGAGGAGTGGGAGAGGT+TGG | - | chr5.4:74760083-74760102 | MS.gene020771:CDS | 60.0% | |
| GTGCGGCGAAGAAATTGCCG+GGG | - | chr5.4:74759899-74759918 | MS.gene020771:CDS | 60.0% | |
| TAACCCTAGTGGAAGGGGGC+CGG | - | chr5.4:74759861-74759880 | MS.gene020771:CDS | 60.0% | |
| TGCGGCGAAGAAATTGCCGG+GGG | - | chr5.4:74759900-74759919 | MS.gene020771:CDS | 60.0% | |
| TTGAGAAGCCGCCGGAGTTG+AGG | - | chr5.4:74759935-74759954 | MS.gene020771:CDS | 60.0% | |
| ! | AGGATGTGGTGGAGGAGGAG+AGG | - | chr5.4:74760199-74760218 | MS.gene020771:CDS | 60.0% |
| ! | TGTGCCGTTGCCGGATGAGA+AGG | - | chr5.4:74760281-74760300 | MS.gene020771:CDS | 60.0% |
| !! | ATTGGAGCGGGTTGAGGCAC+CGG | - | chr5.4:74760035-74760054 | MS.gene020771:CDS | 60.0% |
| AACCCTAGTGGAAGGGGGCC+GGG | - | chr5.4:74759862-74759881 | MS.gene020771:CDS | 65.0% | |
| AGGCGGTTGAGGAGTGGGAG+AGG | - | chr5.4:74760079-74760098 | MS.gene020771:CDS | 65.0% | |
| GAAGGCTGTGAGGAGTGGGG+AGG | - | chr5.4:74760128-74760147 | MS.gene020771:CDS | 65.0% | |
| GACGTGAGGCGGTTGAGGAG+TGG | - | chr5.4:74760073-74760092 | MS.gene020771:CDS | 65.0% | |
| GGCCCCCTTCCACTAGGGTT+AGG | + | chr5.4:74759862-74759881 | None:intergenic | 65.0% | |
| ACCCCGGCCCCCTTCCACTA+GGG | + | chr5.4:74759867-74759886 | None:intergenic | 70.0% | |
| ACCCTAGTGGAAGGGGGCCG+GGG | - | chr5.4:74759863-74759882 | MS.gene020771:CDS | 70.0% | |
| TACCCCGGCCCCCTTCCACT+AGG | + | chr5.4:74759868-74759887 | None:intergenic | 70.0% | |
| !! | GCGGGTTGAGGCACCGGCTG+AGG | - | chr5.4:74760041-74760060 | MS.gene020771:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 74759508 | 74760419 | 74759508 | ID=MS.gene020771 |
| chr5.4 | mRNA | 74759508 | 74760419 | 74759508 | ID=MS.gene020771.t1;Parent=MS.gene020771 |
| chr5.4 | exon | 74759508 | 74760419 | 74759508 | ID=MS.gene020771.t1.exon1;Parent=MS.gene020771.t1 |
| chr5.4 | CDS | 74759508 | 74760419 | 74759508 | ID=cds.MS.gene020771.t1;Parent=MS.gene020771.t1 |
| Gene Sequence |
| Protein sequence |
