Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023523.t1 | XP_024628489.1 | 99.5 | 416 | 2 | 0 | 118 | 533 | 22 | 437 | 1.50E-240 | 842 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023523.t1 | Q93W93 | 64.4 | 416 | 144 | 2 | 118 | 533 | 23 | 434 | 5.1e-157 | 555.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023523.t1 | G7LHY4 | 99.5 | 416 | 2 | 0 | 118 | 533 | 22 | 437 | 1.1e-240 | 842.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene023523 | MS.gene052072 | PPI |
MS.gene023523 | MS.gene013003 | PPI |
MS.gene023523 | MS.gene48483 | PPI |
MS.gene023523 | MS.gene054624 | PPI |
MS.gene023523 | MS.gene049230 | PPI |
MS.gene023523 | MS.gene035805 | PPI |
MS.gene023523 | MS.gene044004 | PPI |
MS.gene023523 | MS.gene40946 | PPI |
MS.gene023523 | MS.gene013259 | PPI |
MS.gene023523 | MS.gene06344 | PPI |
MS.gene023523 | MS.gene044005 | PPI |
MS.gene023523 | MS.gene67151 | PPI |
MS.gene023523 | MS.gene064542 | PPI |
MS.gene023523 | MS.gene78401 | PPI |
MS.gene023523 | MS.gene67091 | PPI |
MS.gene24365 | MS.gene023523 | PPI |
MS.gene023523 | MS.gene062762 | PPI |
MS.gene023523 | MS.gene45537 | PPI |
MS.gene023523 | MS.gene31111 | PPI |
MS.gene023523 | MS.gene73119 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023523.t1 | MTR_8g085600 | 95.642 | 436 | 14 | 1 | 103 | 533 | 2 | 437 | 0.0 | 865 |
MS.gene023523.t1 | MTR_4g114110 | 74.048 | 420 | 106 | 2 | 117 | 533 | 23 | 442 | 0.0 | 665 |
MS.gene023523.t1 | MTR_2g019230 | 31.469 | 286 | 181 | 8 | 173 | 447 | 52 | 333 | 1.70e-35 | 137 |
MS.gene023523.t1 | MTR_3g073640 | 27.968 | 379 | 188 | 12 | 171 | 473 | 41 | 410 | 2.29e-35 | 138 |
MS.gene023523.t1 | MTR_2g008440 | 27.982 | 436 | 235 | 15 | 173 | 532 | 43 | 475 | 3.22e-33 | 132 |
MS.gene023523.t1 | MTR_8g080370 | 30.072 | 276 | 179 | 7 | 173 | 440 | 51 | 320 | 2.83e-30 | 122 |
MS.gene023523.t1 | MTR_8g030940 | 28.797 | 316 | 211 | 8 | 172 | 481 | 24 | 331 | 3.69e-30 | 121 |
MS.gene023523.t1 | MTR_3g085570 | 28.159 | 277 | 183 | 8 | 172 | 439 | 34 | 303 | 8.98e-28 | 115 |
MS.gene023523.t1 | MTR_2g094093 | 30.769 | 286 | 178 | 11 | 166 | 442 | 13 | 287 | 4.77e-26 | 110 |
MS.gene023523.t1 | MTR_7g029290 | 27.076 | 277 | 182 | 9 | 177 | 442 | 59 | 326 | 2.00e-22 | 100 |
MS.gene023523.t1 | MTR_3g083730 | 67.742 | 62 | 20 | 0 | 152 | 213 | 6 | 67 | 7.86e-22 | 89.4 |
MS.gene023523.t1 | MTR_8g085650 | 29.515 | 227 | 139 | 7 | 173 | 381 | 7 | 230 | 8.49e-22 | 97.1 |
MS.gene023523.t1 | MTR_3g094850 | 27.541 | 305 | 195 | 10 | 173 | 470 | 9 | 294 | 3.10e-21 | 95.9 |
MS.gene023523.t1 | MTR_7g095220 | 30.769 | 195 | 121 | 5 | 173 | 357 | 4 | 194 | 1.48e-20 | 93.6 |
MS.gene023523.t1 | MTR_3g083720 | 70.690 | 58 | 16 | 1 | 202 | 259 | 50 | 106 | 2.12e-20 | 88.6 |
MS.gene023523.t1 | MTR_3g108860 | 25.000 | 296 | 192 | 9 | 161 | 447 | 5 | 279 | 8.90e-20 | 91.3 |
MS.gene023523.t1 | MTR_6g023805 | 25.524 | 286 | 189 | 10 | 174 | 442 | 57 | 335 | 5.26e-18 | 86.7 |
MS.gene023523.t1 | MTR_3g083740 | 44.444 | 117 | 34 | 5 | 326 | 440 | 1 | 88 | 1.18e-16 | 76.6 |
MS.gene023523.t1 | MTR_3g083700 | 60.870 | 69 | 23 | 2 | 433 | 500 | 53 | 118 | 3.56e-16 | 75.5 |
MS.gene023523.t1 | MTR_0105s0130 | 25.993 | 277 | 176 | 10 | 180 | 439 | 96 | 360 | 1.56e-15 | 79.3 |
MS.gene023523.t1 | MTR_0345s0010 | 25.993 | 277 | 176 | 10 | 180 | 439 | 96 | 360 | 1.62e-15 | 79.3 |
MS.gene023523.t1 | MTR_1330s0010 | 25.993 | 277 | 176 | 10 | 180 | 439 | 109 | 373 | 2.17e-15 | 79.0 |
MS.gene023523.t1 | MTR_5g039390 | 26.408 | 284 | 181 | 9 | 173 | 439 | 129 | 401 | 6.38e-15 | 77.8 |
MS.gene023523.t1 | MTR_0105s0040 | 25.632 | 277 | 177 | 10 | 180 | 439 | 194 | 458 | 6.65e-15 | 77.8 |
MS.gene023523.t1 | MTR_0105s0170 | 25.714 | 280 | 179 | 10 | 177 | 439 | 106 | 373 | 9.53e-15 | 77.0 |
MS.gene023523.t1 | MTR_4g022260 | 27.753 | 227 | 149 | 7 | 180 | 401 | 78 | 294 | 1.21e-14 | 76.6 |
MS.gene023523.t1 | MTR_0496s0010 | 26.923 | 234 | 156 | 7 | 177 | 405 | 75 | 298 | 1.35e-14 | 76.3 |
MS.gene023523.t1 | MTR_0105s0020 | 25.357 | 280 | 180 | 10 | 177 | 439 | 93 | 360 | 1.43e-14 | 76.3 |
MS.gene023523.t1 | MTR_8g468030 | 25.532 | 282 | 182 | 9 | 175 | 439 | 152 | 422 | 2.42e-14 | 75.9 |
MS.gene023523.t1 | MTR_2g102370 | 26.056 | 284 | 175 | 11 | 173 | 430 | 3 | 277 | 4.25e-13 | 71.2 |
MS.gene023523.t1 | MTR_5g026580 | 26.705 | 352 | 210 | 16 | 173 | 499 | 41 | 369 | 5.51e-13 | 70.9 |
MS.gene023523.t1 | MTR_4g022400 | 24.194 | 248 | 175 | 7 | 158 | 401 | 53 | 291 | 9.88e-13 | 70.5 |
MS.gene023523.t1 | MTR_4g108280 | 23.320 | 253 | 181 | 7 | 153 | 401 | 11 | 254 | 1.63e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023523.t1 | AT1G55270 | 77.644 | 416 | 89 | 2 | 118 | 533 | 23 | 434 | 0.0 | 694 |
MS.gene023523.t1 | AT1G55270 | 74.679 | 312 | 75 | 2 | 222 | 533 | 1 | 308 | 2.17e-177 | 502 |
MS.gene023523.t1 | AT1G22040 | 28.082 | 438 | 231 | 12 | 173 | 532 | 43 | 474 | 1.69e-34 | 136 |
MS.gene023523.t1 | AT1G67480 | 29.503 | 322 | 207 | 10 | 161 | 473 | 27 | 337 | 3.24e-33 | 130 |
MS.gene023523.t1 | AT1G67480 | 29.503 | 322 | 207 | 10 | 161 | 473 | 27 | 337 | 3.24e-33 | 130 |
MS.gene023523.t1 | AT1G67480 | 29.503 | 322 | 207 | 10 | 161 | 473 | 27 | 337 | 3.24e-33 | 130 |
MS.gene023523.t1 | AT1G30090 | 29.352 | 293 | 192 | 7 | 159 | 440 | 39 | 327 | 1.08e-31 | 126 |
MS.gene023523.t1 | AT3G61350 | 26.211 | 351 | 224 | 13 | 165 | 497 | 13 | 346 | 2.97e-30 | 122 |
MS.gene023523.t1 | AT3G61350 | 26.211 | 351 | 224 | 13 | 165 | 497 | 13 | 346 | 2.97e-30 | 122 |
MS.gene023523.t1 | AT1G27420 | 28.058 | 278 | 183 | 6 | 172 | 439 | 9 | 279 | 1.07e-25 | 108 |
MS.gene023523.t1 | AT2G24540 | 24.051 | 316 | 213 | 9 | 149 | 448 | 3 | 307 | 3.96e-25 | 107 |
MS.gene023523.t1 | AT3G27150 | 28.479 | 309 | 200 | 10 | 174 | 470 | 71 | 370 | 2.99e-23 | 102 |
MS.gene023523.t1 | AT3G27150 | 28.479 | 309 | 200 | 10 | 174 | 470 | 71 | 370 | 2.99e-23 | 102 |
MS.gene023523.t1 | AT5G60570 | 28.214 | 280 | 175 | 11 | 173 | 440 | 49 | 314 | 2.55e-18 | 87.4 |
MS.gene023523.t1 | AT5G60570 | 28.214 | 280 | 175 | 11 | 173 | 440 | 49 | 314 | 2.55e-18 | 87.4 |
MS.gene023523.t1 | AT5G60570 | 28.214 | 280 | 175 | 11 | 173 | 440 | 49 | 314 | 2.55e-18 | 87.4 |
MS.gene023523.t1 | AT1G16250 | 25.610 | 246 | 167 | 5 | 169 | 401 | 4 | 246 | 1.06e-17 | 85.5 |
MS.gene023523.t1 | AT1G16250 | 25.610 | 246 | 167 | 5 | 169 | 401 | 4 | 246 | 1.06e-17 | 85.5 |
MS.gene023523.t1 | AT1G80440 | 26.962 | 293 | 182 | 12 | 173 | 441 | 3 | 287 | 3.14e-17 | 84.0 |
MS.gene023523.t1 | AT1G26930 | 27.083 | 288 | 181 | 9 | 173 | 441 | 71 | 348 | 5.67e-17 | 83.6 |
MS.gene023523.t1 | AT3G63220 | 28.351 | 194 | 127 | 4 | 173 | 357 | 4 | 194 | 2.40e-16 | 80.9 |
MS.gene023523.t1 | AT3G63220 | 28.351 | 194 | 127 | 4 | 173 | 357 | 11 | 201 | 3.05e-16 | 80.9 |
MS.gene023523.t1 | AT3G63220 | 28.351 | 194 | 127 | 4 | 173 | 357 | 11 | 201 | 3.05e-16 | 80.9 |
MS.gene023523.t1 | AT2G02870 | 25.641 | 312 | 190 | 12 | 149 | 439 | 101 | 391 | 6.45e-16 | 80.9 |
MS.gene023523.t1 | AT2G02870 | 25.641 | 312 | 190 | 12 | 149 | 439 | 101 | 391 | 6.45e-16 | 80.9 |
MS.gene023523.t1 | AT2G02870 | 25.641 | 312 | 190 | 12 | 149 | 439 | 101 | 391 | 6.45e-16 | 80.9 |
MS.gene023523.t1 | AT1G15670 | 25.753 | 299 | 183 | 11 | 173 | 441 | 3 | 292 | 1.61e-15 | 78.6 |
MS.gene023523.t1 | AT3G43710 | 29.949 | 197 | 132 | 4 | 162 | 355 | 14 | 207 | 4.44e-15 | 77.4 |
MS.gene023523.t1 | AT3G46050 | 28.302 | 265 | 167 | 10 | 159 | 410 | 3 | 257 | 7.15e-15 | 76.6 |
MS.gene023523.t1 | AT1G60570 | 29.187 | 209 | 134 | 5 | 148 | 352 | 1 | 199 | 1.01e-14 | 76.6 |
MS.gene023523.t1 | AT4G39290 | 30.601 | 183 | 120 | 4 | 177 | 354 | 16 | 196 | 1.69e-14 | 75.5 |
MS.gene023523.t1 | AT4G23580 | 26.908 | 249 | 157 | 7 | 177 | 407 | 19 | 260 | 3.30e-14 | 74.7 |
MS.gene023523.t1 | AT4G35120 | 28.365 | 208 | 121 | 7 | 160 | 352 | 10 | 204 | 9.38e-14 | 73.6 |
MS.gene023523.t1 | AT1G26930 | 25.391 | 256 | 154 | 8 | 173 | 407 | 71 | 310 | 1.33e-13 | 72.8 |
MS.gene023523.t1 | AT4G33900 | 31.472 | 197 | 110 | 8 | 177 | 354 | 15 | 205 | 1.57e-13 | 72.8 |
MS.gene023523.t1 | AT1G74510 | 26.923 | 234 | 148 | 9 | 177 | 401 | 99 | 318 | 7.85e-13 | 70.9 |
MS.gene023523.t1 | AT1G74510 | 26.923 | 234 | 148 | 9 | 177 | 401 | 99 | 318 | 7.85e-13 | 70.9 |
MS.gene023523.t1 | AT1G74510 | 26.923 | 234 | 148 | 9 | 177 | 401 | 99 | 318 | 7.85e-13 | 70.9 |
MS.gene023523.t1 | AT5G02980 | 28.788 | 198 | 113 | 7 | 165 | 351 | 3 | 183 | 1.20e-12 | 69.7 |
MS.gene023523.t1 | AT5G03000 | 27.234 | 235 | 158 | 6 | 159 | 384 | 25 | 255 | 1.50e-12 | 69.7 |
MS.gene023523.t1 | AT2G29770 | 24.839 | 310 | 184 | 10 | 159 | 441 | 18 | 305 | 2.83e-12 | 68.9 |
MS.gene023523.t1 | AT2G21950 | 24.415 | 299 | 203 | 9 | 156 | 442 | 3 | 290 | 7.01e-12 | 67.8 |
MS.gene023523.t1 | AT1G31350 | 21.591 | 352 | 227 | 13 | 173 | 490 | 71 | 407 | 1.08e-11 | 67.4 |
MS.gene023523.t1 | AT1G31350 | 21.591 | 352 | 227 | 13 | 173 | 490 | 35 | 371 | 1.36e-11 | 67.0 |
MS.gene023523.t1 | AT4G34170 | 29.775 | 178 | 103 | 6 | 177 | 354 | 15 | 170 | 2.23e-11 | 65.5 |
MS.gene023523.t1 | AT5G26960 | 29.536 | 237 | 137 | 10 | 174 | 394 | 44 | 266 | 2.49e-11 | 66.2 |
Find 134 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAGCTCTTGTTTCACTTAA+TGG | 0.104977 | 4.3:+15203802 | MS.gene023523:CDS |
CAATCCCTCCCGCCTGTTCC+TGG | 0.147139 | 4.3:+15203181 | MS.gene023523:CDS |
GGTCTTTAGTTAGGAATTTA+TGG | 0.197065 | 4.3:+15203944 | MS.gene023523:CDS |
GCGGGAGGGATTGCCATATT+TGG | 0.244284 | 4.3:-15203171 | None:intergenic |
ACATCCATTGCAGCATTCTA+TGG | 0.245729 | 4.3:+15202037 | MS.gene023523:CDS |
TTGACCCTATCTACCAAATA+TGG | 0.280582 | 4.3:+15203158 | MS.gene023523:CDS |
TTTATTGGTGTTATTCATAA+TGG | 0.293556 | 4.3:+15203520 | MS.gene023523:CDS |
ACGACCATTCCATTGTTTAC+TGG | 0.294115 | 4.3:-15203622 | None:intergenic |
CACACCTTTAGAATAGAGTT+TGG | 0.310142 | 4.3:-15201817 | None:intergenic |
ACAACGCACGTACAAATAAA+TGG | 0.313254 | 4.3:+15203314 | MS.gene023523:CDS |
TATTCTGAAGCATTGGGATT+TGG | 0.319911 | 4.3:+15203208 | MS.gene023523:CDS |
TGTGCATTCGGGTTTATATC+AGG | 0.324598 | 4.3:-15202878 | None:intergenic |
TTATGAATAACACCAATAAA+AGG | 0.331081 | 4.3:-15203517 | None:intergenic |
AGCTCCATCTGTTCCGATTA+GGG | 0.347050 | 4.3:-15203465 | None:intergenic |
AATCCCTCCCGCCTGTTCCT+GGG | 0.349626 | 4.3:+15203182 | MS.gene023523:CDS |
AAGCTCCATCTGTTCCGATT+AGG | 0.349975 | 4.3:-15203466 | None:intergenic |
GATTGCCATATTTGGTAGAT+AGG | 0.357958 | 4.3:-15203163 | None:intergenic |
ATCGATAGCAGGCTTCATTT+AGG | 0.362076 | 4.3:+15203757 | MS.gene023523:CDS |
CACCTCTGGGAAAATATTGC+TGG | 0.367840 | 4.3:+15203907 | MS.gene023523:CDS |
TGCTATTGTAAAGTAGATTC+AGG | 0.375567 | 4.3:+15202797 | MS.gene023523:CDS |
TAAACTCAAAGTCTATGATA+TGG | 0.375642 | 4.3:+15203711 | MS.gene023523:CDS |
ATGACGTTTCCGCAGCATAT+CGG | 0.378022 | 4.3:-15203347 | None:intergenic |
CAAATCACGTTGCTGGTGAT+TGG | 0.392726 | 4.3:+15202089 | MS.gene023523:CDS |
GGTTGCCACTTGTACTTGTT+TGG | 0.403994 | 4.3:+15203247 | MS.gene023523:CDS |
ATGATATGGCGACGGATTCA+TGG | 0.409397 | 4.3:+15203725 | MS.gene023523:CDS |
AATCCAAGTATCTCACTTAA+CGG | 0.412505 | 4.3:+15203655 | MS.gene023523:CDS |
TTCATATTAGCCCAAGCTGT+TGG | 0.419842 | 4.3:+15202237 | MS.gene023523:intron |
CTGAGGTTTACGACCCTAAT+CGG | 0.421824 | 4.3:+15203452 | MS.gene023523:CDS |
AGATGGTATCGCCTTCTGTC+TGG | 0.422115 | 4.3:+15203037 | MS.gene023523:CDS |
AAAATTATTACGTTCAAAGT+AGG | 0.423720 | 4.3:-15202174 | None:intergenic |
TCCATTGTTTACTGGAGTCC+AGG | 0.429205 | 4.3:-15203614 | None:intergenic |
GGGGCGAGGAAGTTTGTTCC+AGG | 0.432644 | 4.3:+15202836 | MS.gene023523:CDS |
TCATATTAGCCCAAGCTGTT+GGG | 0.433623 | 4.3:+15202238 | MS.gene023523:intron |
AATAACTGCCTCTATGTTGC+TGG | 0.434024 | 4.3:+15203391 | MS.gene023523:CDS |
TTGAAAACAATCCTCACCTC+TGG | 0.437794 | 4.3:+15203893 | MS.gene023523:CDS |
TCTTGGAATGGCAGAAGAAT+GGG | 0.438690 | 4.3:+15203087 | MS.gene023523:CDS |
GTCTTGGAATGGCAGAAGAA+TGG | 0.439174 | 4.3:+15203086 | MS.gene023523:CDS |
GGGGAATATTCTGAAGCATT+GGG | 0.439296 | 4.3:+15203202 | MS.gene023523:CDS |
TGACGTTTCCGCAGCATATC+GGG | 0.442333 | 4.3:-15203346 | None:intergenic |
GTTCAGCCTCCTTTGCTACC+TGG | 0.446688 | 4.3:+15202935 | MS.gene023523:CDS |
GAAATGTCAAATCACGTTGC+TGG | 0.447019 | 4.3:+15202082 | MS.gene023523:CDS |
GAATGCTGCAATGGATGTTT+AGG | 0.447668 | 4.3:-15202032 | None:intergenic |
TCAGAATATTCCCCAGGAAC+AGG | 0.449230 | 4.3:-15203193 | None:intergenic |
GTGAAGAAGCCCAACAGCTT+GGG | 0.449358 | 4.3:-15202247 | None:intergenic |
TCAGGCCTGAAAACAGTAGC+TGG | 0.451037 | 4.3:+15202815 | MS.gene023523:CDS |
CTTTGAGTTTACAGCCGTCT+TGG | 0.451770 | 4.3:-15203699 | None:intergenic |
CAAGCAATAGCAAGATCATC+AGG | 0.451957 | 4.3:-15202962 | None:intergenic |
GAGTTTGTGAAGGAAAATTC+CGG | 0.453120 | 4.3:+15202276 | MS.gene023523:CDS |
TTTGGCTGTGCCGTTCTTAG+TGG | 0.453925 | 4.3:+15203226 | MS.gene023523:CDS |
TGAACATAGGAAACTGCGTT+TGG | 0.455533 | 4.3:+15203006 | MS.gene023523:CDS |
GTCCTGTCAGGTCTTTAGTT+AGG | 0.455869 | 4.3:+15203935 | MS.gene023523:CDS |
TATTCGCTCCGGAAAAGTCT+TGG | 0.457791 | 4.3:+15203070 | MS.gene023523:CDS |
TGGGGAATATTCTGAAGCAT+TGG | 0.458628 | 4.3:+15203201 | MS.gene023523:CDS |
CTGGGAAAATATTGCTGGAA+AGG | 0.473920 | 4.3:+15203912 | MS.gene023523:CDS |
TGGATGCATATCTTTGATCC+TGG | 0.484538 | 4.3:-15202854 | None:intergenic |
CAACAATATGAGCATCAGTC+TGG | 0.486023 | 4.3:+15203843 | MS.gene023523:CDS |
TGCGTTTGGTTTGCAAGAGA+TGG | 0.486322 | 4.3:+15203020 | MS.gene023523:CDS |
TCTCCGTTAAGTGAGATACT+TGG | 0.486498 | 4.3:-15203658 | None:intergenic |
AAATCACGTTGCTGGTGATT+GGG | 0.491372 | 4.3:+15202090 | MS.gene023523:CDS |
TTCTCCAAACTCTATTCTAA+AGG | 0.492825 | 4.3:+15201813 | MS.gene023523:CDS |
GGAAGAAGTTTATCGATAGC+AGG | 0.495335 | 4.3:+15203746 | MS.gene023523:CDS |
TGTGAAGAAGCCCAACAGCT+TGG | 0.497518 | 4.3:-15202248 | None:intergenic |
ATCCCTCCCGCCTGTTCCTG+GGG | 0.498984 | 4.3:+15203183 | MS.gene023523:CDS |
TGCCACTTGTACTTGTTTGG+TGG | 0.513695 | 4.3:+15203250 | MS.gene023523:CDS |
CAGTTTCCTATGTTCAACTC+GGG | 0.513705 | 4.3:-15202999 | None:intergenic |
AATTTATGGTCTACTATCGC+AGG | 0.517084 | 4.3:+15203958 | MS.gene023523:CDS |
TTGCTGGAAAGGGTCCTGTC+AGG | 0.517356 | 4.3:+15203923 | MS.gene023523:CDS |
GGTATCGGATTCCTGTGAAT+AGG | 0.523925 | 4.3:-15203593 | None:intergenic |
CATTCGGGTTTATATCAGGT+TGG | 0.524469 | 4.3:-15202874 | None:intergenic |
CAAAGTAGGTGATAAAATGT+AGG | 0.525755 | 4.3:-15202160 | None:intergenic |
AGTAAACAATGGAATGGTCG+TGG | 0.529726 | 4.3:+15203624 | MS.gene023523:CDS |
ATTCACAGGAATCCGATACC+TGG | 0.530018 | 4.3:+15203596 | MS.gene023523:CDS |
ATTGCCATATTTGGTAGATA+GGG | 0.532627 | 4.3:-15203162 | None:intergenic |
GTTTACTGGAGTCCAGGTAT+CGG | 0.532775 | 4.3:-15203608 | None:intergenic |
TCACAAATCTAAGTTTGTGA+AGG | 0.534774 | 4.3:+15202414 | MS.gene023523:CDS |
AAGACAGCATACAATGTGTA+AGG | 0.536294 | 4.3:-15201772 | None:intergenic |
GAGTTTGGAGAATATCGCTT+CGG | 0.536386 | 4.3:-15201802 | None:intergenic |
CATCCATTGCAGCATTCTAT+GGG | 0.538840 | 4.3:+15202038 | MS.gene023523:CDS |
TGGTGGAAGAGATCCGTTGA+AGG | 0.541573 | 4.3:+15203267 | MS.gene023523:CDS |
CAGGCCTGAAAACAGTAGCT+GGG | 0.543433 | 4.3:+15202816 | MS.gene023523:CDS |
TGGGAAAATATTGCTGGAAA+GGG | 0.544190 | 4.3:+15203913 | MS.gene023523:CDS |
AAAAGAAATTTCCAGACAGA+AGG | 0.548143 | 4.3:-15203048 | None:intergenic |
GGAGAATATCGCTTCGGTGA+AGG | 0.549177 | 4.3:-15201796 | None:intergenic |
GAACAGATGGAGCTTTATCT+CGG | 0.551686 | 4.3:+15203474 | MS.gene023523:CDS |
CTCGGAGATGACCACAGCTA+TGG | 0.552147 | 4.3:+15203492 | MS.gene023523:CDS |
TCAGGAAGACCAGGTAGCAA+AGG | 0.554838 | 4.3:-15202944 | None:intergenic |
TTCCTAACTAAAGACCTGAC+AGG | 0.558546 | 4.3:-15203937 | None:intergenic |
TGAAAACAGTAGCTGGGGCG+AGG | 0.559188 | 4.3:+15202822 | MS.gene023523:CDS |
CATATGTGAAGCCTATTCAC+AGG | 0.559893 | 4.3:+15203582 | MS.gene023523:CDS |
GGAAGACCAGGTAGCAAAGG+AGG | 0.560707 | 4.3:-15202941 | None:intergenic |
TCACAAATCCGAGTTTGTGA+AGG | 0.563136 | 4.3:+15202266 | MS.gene023523:CDS |
TATGCACTTGATTGCCAAGA+CGG | 0.568382 | 4.3:+15203685 | MS.gene023523:CDS |
GCAAGATCATCAGGAAGACC+AGG | 0.572772 | 4.3:-15202953 | None:intergenic |
ACTAACAGGTAAAGTTTCAC+AGG | 0.577126 | 4.3:+15202760 | MS.gene023523:intron |
TTCCACCAAACAAGTACAAG+TGG | 0.579081 | 4.3:-15203252 | None:intergenic |
TGAAAACAATCCTCACCTCT+GGG | 0.580142 | 4.3:+15203894 | MS.gene023523:CDS |
GTGTACCCCGAGTTGAACAT+AGG | 0.580144 | 4.3:+15202993 | MS.gene023523:CDS |
CTGCCTCTATGTTGCTGGTG+GGG | 0.582217 | 4.3:+15203396 | MS.gene023523:CDS |
GCAGTTTCCTATGTTCAACT+CGG | 0.584524 | 4.3:-15203000 | None:intergenic |
AACTGCCTCTATGTTGCTGG+TGG | 0.585089 | 4.3:+15203394 | MS.gene023523:CDS |
AATATTCCCCAGGAACAGGC+GGG | 0.587157 | 4.3:-15203189 | None:intergenic |
GGTGGAAGAGATCCGTTGAA+GGG | 0.595602 | 4.3:+15203268 | MS.gene023523:CDS |
ACGACCCTAATCGGAACAGA+TGG | 0.598075 | 4.3:+15203461 | MS.gene023523:CDS |
AATGCTTCAGAATATTCCCC+AGG | 0.600246 | 4.3:-15203199 | None:intergenic |
GTGTTATTCATAATGGCACA+TGG | 0.603825 | 4.3:+15203527 | MS.gene023523:CDS |
ACTGCCTCTATGTTGCTGGT+GGG | 0.605055 | 4.3:+15203395 | MS.gene023523:CDS |
GACTCCAGTAAACAATGGAA+TGG | 0.605106 | 4.3:+15203618 | MS.gene023523:CDS |
TTCCCCAGGAACAGGCGGGA+GGG | 0.606081 | 4.3:-15203185 | None:intergenic |
CGCCTCATAGATCCCTTCAA+CGG | 0.606636 | 4.3:-15203280 | None:intergenic |
TGGTCTACTATCGCAGGGCG+CGG | 0.607872 | 4.3:+15203964 | MS.gene023523:CDS |
ATTCCCCACCAGCAACATAG+AGG | 0.608916 | 4.3:-15203399 | None:intergenic |
GCTCCGGAAAAGTCTTGGAA+TGG | 0.613465 | 4.3:+15203075 | MS.gene023523:CDS |
ACAATGGAATGGTCGTGGGA+TGG | 0.614216 | 4.3:+15203629 | MS.gene023523:CDS |
ATTCCCCAGGAACAGGCGGG+AGG | 0.614780 | 4.3:-15203186 | None:intergenic |
ATCCGTTGAAGGGATCTATG+AGG | 0.615494 | 4.3:+15203278 | MS.gene023523:CDS |
GAATATTCCCCAGGAACAGG+CGG | 0.615952 | 4.3:-15203190 | None:intergenic |
TATCCCATAGAATGCTGCAA+TGG | 0.619553 | 4.3:-15202041 | None:intergenic |
CTTCCGATACATACATGCAC+CGG | 0.619869 | 4.3:-15202295 | None:intergenic |
AAGAACTCTTCGATCTGCTG+AGG | 0.620049 | 4.3:+15203435 | MS.gene023523:CDS |
CAAGTGGCAACCACTAAGAA+CGG | 0.620531 | 4.3:-15203236 | None:intergenic |
TCTACTATCGCAGGGCGCGG+TGG | 0.621549 | 4.3:+15203967 | MS.gene023523:CDS |
ACCTGGACTCCAGTAAACAA+TGG | 0.623432 | 4.3:+15203613 | MS.gene023523:CDS |
GTAAACAATGGAATGGTCGT+GGG | 0.628265 | 4.3:+15203625 | MS.gene023523:CDS |
GTTGCTGGTGGGGAATGTAA+AGG | 0.635408 | 4.3:+15203406 | MS.gene023523:CDS |
CAAAGTCTATGATATGGCGA+CGG | 0.642307 | 4.3:+15203717 | MS.gene023523:CDS |
ACAGAGCACCCGATATGCTG+CGG | 0.651004 | 4.3:+15203338 | MS.gene023523:CDS |
ATTTATGGTCTACTATCGCA+GGG | 0.652108 | 4.3:+15203959 | MS.gene023523:CDS |
AGGCCTGAAAACAGTAGCTG+GGG | 0.656010 | 4.3:+15202817 | MS.gene023523:CDS |
TGTCATCAAAAGAGACCGTG+AGG | 0.661494 | 4.3:+15203114 | MS.gene023523:CDS |
ACAGCATACAATGTGTAAGG+TGG | 0.665807 | 4.3:-15201769 | None:intergenic |
AGTTTCCTATGTTCAACTCG+GGG | 0.678256 | 4.3:-15202998 | None:intergenic |
GTCATCAAAAGAGACCGTGA+GGG | 0.680560 | 4.3:+15203115 | MS.gene023523:CDS |
ATATAAACCCGAATGCACAC+AGG | 0.688244 | 4.3:+15202882 | MS.gene023523:CDS |
AATAAAAGGAACCATAGCTG+TGG | 0.696250 | 4.3:-15203503 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTAATTAATAAAACAAC+AGG | - | chr4.3:15202471-15202490 | None:intergenic | 10.0% |
!!! | ATTTAATTTAATAAAACAAC+AGG | - | chr4.3:15202323-15202342 | None:intergenic | 10.0% |
!!! | CTTGATAAAATAATTTATTT+TGG | + | chr4.3:15202684-15202703 | MS.gene023523:intron | 10.0% |
!! | AAAATTATTACGTTCAAAGT+AGG | - | chr4.3:15202177-15202196 | None:intergenic | 20.0% |
!! | TTATGAATAACACCAATAAA+AGG | - | chr4.3:15203520-15203539 | None:intergenic | 20.0% |
!! | TTCAACATATATATACTAAC+AGG | + | chr4.3:15202746-15202765 | MS.gene023523:intron | 20.0% |
!!! | TATTTTGGTGCATATTATTA+GGG | + | chr4.3:15202699-15202718 | MS.gene023523:intron | 20.0% |
!!! | TTATTTTGGTGCATATTATT+AGG | + | chr4.3:15202698-15202717 | MS.gene023523:intron | 20.0% |
!!! | TTTATTGGTGTTATTCATAA+TGG | + | chr4.3:15203520-15203539 | MS.gene023523:CDS | 20.0% |
! | TAAACTCAAAGTCTATGATA+TGG | + | chr4.3:15203711-15203730 | MS.gene023523:CDS | 25.0% |
! | TTGCAGCAATTAAAGTAAAA+CGG | + | chr4.3:15202599-15202618 | MS.gene023523:intron | 25.0% |
!! | AAAGAATCAAAGTACCAAAA+AGG | - | chr4.3:15202728-15202747 | None:intergenic | 25.0% |
AAAAGAAATTTCCAGACAGA+AGG | - | chr4.3:15203051-15203070 | None:intergenic | 30.0% | |
AATCCAAGTATCTCACTTAA+CGG | + | chr4.3:15203655-15203674 | MS.gene023523:CDS | 30.0% | |
ATTGCCATATTTGGTAGATA+GGG | - | chr4.3:15203165-15203184 | None:intergenic | 30.0% | |
CAAAGTAGGTGATAAAATGT+AGG | - | chr4.3:15202163-15202182 | None:intergenic | 30.0% | |
GGTCTTTAGTTAGGAATTTA+TGG | + | chr4.3:15203944-15203963 | MS.gene023523:CDS | 30.0% | |
TATCAGAAAAAAAGGCAAGT+AGG | - | chr4.3:15201975-15201994 | None:intergenic | 30.0% | |
TCACAAATCTAAGTTTGTGA+AGG | + | chr4.3:15202414-15202433 | MS.gene023523:CDS | 30.0% | |
TGCTATTGTAAAGTAGATTC+AGG | + | chr4.3:15202797-15202816 | MS.gene023523:CDS | 30.0% | |
TTCTCCAAACTCTATTCTAA+AGG | + | chr4.3:15201813-15201832 | MS.gene023523:CDS | 30.0% | |
TTTACTTTAATTGCTGCAAG+CGG | - | chr4.3:15202598-15202617 | None:intergenic | 30.0% | |
! | GAAATTTCTTTTATTCGCTC+CGG | + | chr4.3:15203059-15203078 | MS.gene023523:CDS | 30.0% |
! | TATTATTAGGGATGCCTTTT+TGG | + | chr4.3:15202711-15202730 | MS.gene023523:intron | 30.0% |
!!! | TATTGTGGTTCTAGCATTTT+AGG | + | chr4.3:15201848-15201867 | MS.gene023523:intron | 30.0% |
AAGACAGCATACAATGTGTA+AGG | - | chr4.3:15201775-15201794 | None:intergenic | 35.0% | |
AATAAAAGGAACCATAGCTG+TGG | - | chr4.3:15203506-15203525 | None:intergenic | 35.0% | |
AATTTATGGTCTACTATCGC+AGG | + | chr4.3:15203958-15203977 | MS.gene023523:CDS | 35.0% | |
ACAAACATCATGAGATCAAC+AGG | - | chr4.3:15202535-15202554 | None:intergenic | 35.0% | |
ACAACGCACGTACAAATAAA+TGG | + | chr4.3:15203314-15203333 | MS.gene023523:CDS | 35.0% | |
ACTAACAGGTAAAGTTTCAC+AGG | + | chr4.3:15202760-15202779 | MS.gene023523:intron | 35.0% | |
ATTTATGGTCTACTATCGCA+GGG | + | chr4.3:15203959-15203978 | MS.gene023523:CDS | 35.0% | |
CAGTTTCATGCTTCATTATG+CGG | - | chr4.3:15202350-15202369 | None:intergenic | 35.0% | |
GAGTTTGTGAAGGAAAATTC+CGG | + | chr4.3:15202276-15202295 | MS.gene023523:CDS | 35.0% | |
GATCTCATGATGTTTGTGAT+GGG | + | chr4.3:15202538-15202557 | MS.gene023523:intron | 35.0% | |
GATTGCCATATTTGGTAGAT+AGG | - | chr4.3:15203166-15203185 | None:intergenic | 35.0% | |
TATTGATGCGTAGTATGTGT+TGG | + | chr4.3:15201929-15201948 | MS.gene023523:intron | 35.0% | |
TGAAAGCAATATTGCCTTGT+TGG | + | chr4.3:15202509-15202528 | MS.gene023523:intron | 35.0% | |
TGATCTCATGATGTTTGTGA+TGG | + | chr4.3:15202537-15202556 | MS.gene023523:intron | 35.0% | |
TGGGAAAATATTGCTGGAAA+GGG | + | chr4.3:15203913-15203932 | MS.gene023523:CDS | 35.0% | |
TTACTTTAATTGCTGCAAGC+GGG | - | chr4.3:15202597-15202616 | None:intergenic | 35.0% | |
TTGACCCTATCTACCAAATA+TGG | + | chr4.3:15203158-15203177 | MS.gene023523:CDS | 35.0% | |
! | AATGGCACATGGTTTTTGAA+GGG | + | chr4.3:15203538-15203557 | MS.gene023523:CDS | 35.0% |
! | ACAGCTATGGTTCCTTTTAT+TGG | + | chr4.3:15203505-15203524 | MS.gene023523:CDS | 35.0% |
! | AGTAGTCGATTCAAAAAGTC+TGG | - | chr4.3:15202002-15202021 | None:intergenic | 35.0% |
! | CAAACTCTATTCTAAAGGTG+TGG | + | chr4.3:15201818-15201837 | MS.gene023523:intron | 35.0% |
! | GCAATGAAATTTTTCCCTCA+CGG | - | chr4.3:15203132-15203151 | None:intergenic | 35.0% |
! | GGAATTTTCCTTCACAAACT+CGG | - | chr4.3:15202277-15202296 | None:intergenic | 35.0% |
! | GTGTTATTCATAATGGCACA+TGG | + | chr4.3:15203527-15203546 | MS.gene023523:CDS | 35.0% |
! | TAATGGCACATGGTTTTTGA+AGG | + | chr4.3:15203537-15203556 | MS.gene023523:CDS | 35.0% |
! | TATTCTAAAGGTGTGGAACT+GGG | + | chr4.3:15201825-15201844 | MS.gene023523:intron | 35.0% |
! | TGTTTGTGATGGGAATAACT+TGG | + | chr4.3:15202548-15202567 | MS.gene023523:intron | 35.0% |
! | TTTTTGTTCCTGTGTGCATT+CGG | - | chr4.3:15202893-15202912 | None:intergenic | 35.0% |
!! | CACACCTTTAGAATAGAGTT+TGG | - | chr4.3:15201820-15201839 | None:intergenic | 35.0% |
!! | CTGGAAGGTATCAGAAAAAA+AGG | - | chr4.3:15201983-15202002 | None:intergenic | 35.0% |
!! | TATTCTGAAGCATTGGGATT+TGG | + | chr4.3:15203208-15203227 | MS.gene023523:CDS | 35.0% |
AAATCACGTTGCTGGTGATT+GGG | + | chr4.3:15202090-15202109 | MS.gene023523:CDS | 40.0% | |
AACAGCTTGGGCTAATATGA+AGG | - | chr4.3:15202238-15202257 | None:intergenic | 40.0% | |
AATAACTGCCTCTATGTTGC+TGG | + | chr4.3:15203391-15203410 | MS.gene023523:CDS | 40.0% | |
AATGCTTCAGAATATTCCCC+AGG | - | chr4.3:15203202-15203221 | None:intergenic | 40.0% | |
ACAGCATACAATGTGTAAGG+TGG | - | chr4.3:15201772-15201791 | None:intergenic | 40.0% | |
ACATCCATTGCAGCATTCTA+TGG | + | chr4.3:15202037-15202056 | MS.gene023523:CDS | 40.0% | |
ACGACCATTCCATTGTTTAC+TGG | - | chr4.3:15203625-15203644 | None:intergenic | 40.0% | |
AGTAAACAATGGAATGGTCG+TGG | + | chr4.3:15203624-15203643 | MS.gene023523:CDS | 40.0% | |
AGTTTCCTATGTTCAACTCG+GGG | - | chr4.3:15203001-15203020 | None:intergenic | 40.0% | |
ATATAAACCCGAATGCACAC+AGG | + | chr4.3:15202882-15202901 | MS.gene023523:CDS | 40.0% | |
ATCGATAGCAGGCTTCATTT+AGG | + | chr4.3:15203757-15203776 | MS.gene023523:CDS | 40.0% | |
ATTCCGGTGCATGTATGTAT+CGG | + | chr4.3:15202292-15202311 | MS.gene023523:intron | 40.0% | |
CAAAGTCTATGATATGGCGA+CGG | + | chr4.3:15203717-15203736 | MS.gene023523:CDS | 40.0% | |
CAACAATATGAGCATCAGTC+TGG | + | chr4.3:15203843-15203862 | MS.gene023523:CDS | 40.0% | |
CAAGCAATAGCAAGATCATC+AGG | - | chr4.3:15202965-15202984 | None:intergenic | 40.0% | |
CAGTTTCCTATGTTCAACTC+GGG | - | chr4.3:15203002-15203021 | None:intergenic | 40.0% | |
CATATGTGAAGCCTATTCAC+AGG | + | chr4.3:15203582-15203601 | MS.gene023523:CDS | 40.0% | |
CATCCATTGCAGCATTCTAT+GGG | + | chr4.3:15202038-15202057 | MS.gene023523:CDS | 40.0% | |
CTGGGAAAATATTGCTGGAA+AGG | + | chr4.3:15203912-15203931 | MS.gene023523:CDS | 40.0% | |
GAAACTGATATTGCCTTGGT+TGG | + | chr4.3:15202363-15202382 | MS.gene023523:intron | 40.0% | |
GAAATGTCAAATCACGTTGC+TGG | + | chr4.3:15202082-15202101 | MS.gene023523:CDS | 40.0% | |
GAATGCTGCAATGGATGTTT+AGG | - | chr4.3:15202035-15202054 | None:intergenic | 40.0% | |
GACTCCAGTAAACAATGGAA+TGG | + | chr4.3:15203618-15203637 | MS.gene023523:CDS | 40.0% | |
GAGTTTGGAGAATATCGCTT+CGG | - | chr4.3:15201805-15201824 | None:intergenic | 40.0% | |
GCAGTTTCCTATGTTCAACT+CGG | - | chr4.3:15203003-15203022 | None:intergenic | 40.0% | |
GCATGAAACTGATATTGCCT+TGG | + | chr4.3:15202359-15202378 | MS.gene023523:intron | 40.0% | |
GGAAGAAGTTTATCGATAGC+AGG | + | chr4.3:15203746-15203765 | MS.gene023523:CDS | 40.0% | |
GTAAACAATGGAATGGTCGT+GGG | + | chr4.3:15203625-15203644 | MS.gene023523:CDS | 40.0% | |
TACTTTAATTGCTGCAAGCG+GGG | - | chr4.3:15202596-15202615 | None:intergenic | 40.0% | |
TATCCCATAGAATGCTGCAA+TGG | - | chr4.3:15202044-15202063 | None:intergenic | 40.0% | |
TATGCACTTGATTGCCAAGA+CGG | + | chr4.3:15203685-15203704 | MS.gene023523:CDS | 40.0% | |
TCACAAATCCGAGTTTGTGA+AGG | + | chr4.3:15202266-15202285 | MS.gene023523:CDS | 40.0% | |
TCATATTAGCCCAAGCTGTT+GGG | + | chr4.3:15202238-15202257 | MS.gene023523:intron | 40.0% | |
TCTCCGTTAAGTGAGATACT+TGG | - | chr4.3:15203661-15203680 | None:intergenic | 40.0% | |
TCTTGGAATGGCAGAAGAAT+GGG | + | chr4.3:15203087-15203106 | MS.gene023523:CDS | 40.0% | |
TGAAAACAATCCTCACCTCT+GGG | + | chr4.3:15203894-15203913 | MS.gene023523:CDS | 40.0% | |
TGAACATAGGAAACTGCGTT+TGG | + | chr4.3:15203006-15203025 | MS.gene023523:CDS | 40.0% | |
TGAGTTCAATAGACCAACCA+AGG | - | chr4.3:15202379-15202398 | None:intergenic | 40.0% | |
TGGATGCATATCTTTGATCC+TGG | - | chr4.3:15202857-15202876 | None:intergenic | 40.0% | |
TTCATATTAGCCCAAGCTGT+TGG | + | chr4.3:15202237-15202256 | MS.gene023523:intron | 40.0% | |
TTCCACCAAACAAGTACAAG+TGG | - | chr4.3:15203255-15203274 | None:intergenic | 40.0% | |
TTCCTAACTAAAGACCTGAC+AGG | - | chr4.3:15203940-15203959 | None:intergenic | 40.0% | |
TTGAAAACAATCCTCACCTC+TGG | + | chr4.3:15203893-15203912 | MS.gene023523:CDS | 40.0% | |
! | CATTCGGGTTTATATCAGGT+TGG | - | chr4.3:15202877-15202896 | None:intergenic | 40.0% |
! | CTATTCTAAAGGTGTGGAAC+TGG | + | chr4.3:15201824-15201843 | MS.gene023523:intron | 40.0% |
! | GAACAGATGGAGCTTTATCT+CGG | + | chr4.3:15203474-15203493 | MS.gene023523:CDS | 40.0% |
! | GCAGCTCTTGTTTCACTTAA+TGG | + | chr4.3:15203802-15203821 | MS.gene023523:CDS | 40.0% |
! | GTCGATTCAAAAAGTCTGGA+AGG | - | chr4.3:15201998-15202017 | None:intergenic | 40.0% |
! | TGTGCATTCGGGTTTATATC+AGG | - | chr4.3:15202881-15202900 | None:intergenic | 40.0% |
! | TTCCAGCAATATTTTCCCAG+AGG | - | chr4.3:15203912-15203931 | None:intergenic | 40.0% |
! | TTGTGATGGGAATAACTTGG+TGG | + | chr4.3:15202551-15202570 | MS.gene023523:intron | 40.0% |
! | TTGTTTTCAACGCGTCTGTT+TGG | - | chr4.3:15203883-15203902 | None:intergenic | 40.0% |
! | TTTTGTTCCTGTGTGCATTC+GGG | - | chr4.3:15202892-15202911 | None:intergenic | 40.0% |
!! | ATGGCACATGGTTTTTGAAG+GGG | + | chr4.3:15203539-15203558 | MS.gene023523:CDS | 40.0% |
!! | GACGCGTTTTAACAGAAAGA+CGG | - | chr4.3:15202210-15202229 | None:intergenic | 40.0% |
!! | GGGGAATATTCTGAAGCATT+GGG | + | chr4.3:15203202-15203221 | MS.gene023523:CDS | 40.0% |
!! | TGGGGAATATTCTGAAGCAT+TGG | + | chr4.3:15203201-15203220 | MS.gene023523:CDS | 40.0% |
AAGAACTCTTCGATCTGCTG+AGG | + | chr4.3:15203435-15203454 | MS.gene023523:CDS | 45.0% | |
AAGCTCCATCTGTTCCGATT+AGG | - | chr4.3:15203469-15203488 | None:intergenic | 45.0% | |
ACCTGGACTCCAGTAAACAA+TGG | + | chr4.3:15203613-15203632 | MS.gene023523:CDS | 45.0% | |
AGCTCCATCTGTTCCGATTA+GGG | - | chr4.3:15203468-15203487 | None:intergenic | 45.0% | |
ATCCGTTGAAGGGATCTATG+AGG | + | chr4.3:15203278-15203297 | MS.gene023523:CDS | 45.0% | |
ATGACGTTTCCGCAGCATAT+CGG | - | chr4.3:15203350-15203369 | None:intergenic | 45.0% | |
ATGAGATCAACAGGCCAACA+AGG | - | chr4.3:15202526-15202545 | None:intergenic | 45.0% | |
ATTCACAGGAATCCGATACC+TGG | + | chr4.3:15203596-15203615 | MS.gene023523:CDS | 45.0% | |
CAAATCACGTTGCTGGTGAT+TGG | + | chr4.3:15202089-15202108 | MS.gene023523:CDS | 45.0% | |
CAAGTGGCAACCACTAAGAA+CGG | - | chr4.3:15203239-15203258 | None:intergenic | 45.0% | |
CAATGGATGTTTAGGCTGAG+GGG | - | chr4.3:15202027-15202046 | None:intergenic | 45.0% | |
CTGAGGTTTACGACCCTAAT+CGG | + | chr4.3:15203452-15203471 | MS.gene023523:CDS | 45.0% | |
CTTCCGATACATACATGCAC+CGG | - | chr4.3:15202298-15202317 | None:intergenic | 45.0% | |
GCAATGGATGTTTAGGCTGA+GGG | - | chr4.3:15202028-15202047 | None:intergenic | 45.0% | |
GTCATCAAAAGAGACCGTGA+GGG | + | chr4.3:15203115-15203134 | MS.gene023523:CDS | 45.0% | |
GTCCTGTCAGGTCTTTAGTT+AGG | + | chr4.3:15203935-15203954 | MS.gene023523:CDS | 45.0% | |
GTCTTGGAATGGCAGAAGAA+TGG | + | chr4.3:15203086-15203105 | MS.gene023523:CDS | 45.0% | |
GTTTACTGGAGTCCAGGTAT+CGG | - | chr4.3:15203611-15203630 | None:intergenic | 45.0% | |
TATTCGCTCCGGAAAAGTCT+TGG | + | chr4.3:15203070-15203089 | MS.gene023523:CDS | 45.0% | |
TCAGAATATTCCCCAGGAAC+AGG | - | chr4.3:15203196-15203215 | None:intergenic | 45.0% | |
TCCATTGTTTACTGGAGTCC+AGG | - | chr4.3:15203617-15203636 | None:intergenic | 45.0% | |
TGCAATGGATGTTTAGGCTG+AGG | - | chr4.3:15202029-15202048 | None:intergenic | 45.0% | |
TGTCATCAAAAGAGACCGTG+AGG | + | chr4.3:15203114-15203133 | MS.gene023523:CDS | 45.0% | |
! | ATGATATGGCGACGGATTCA+TGG | + | chr4.3:15203725-15203744 | MS.gene023523:CDS | 45.0% |
! | CACCTCTGGGAAAATATTGC+TGG | + | chr4.3:15203907-15203926 | MS.gene023523:CDS | 45.0% |
! | CTGCCATTCCAAGACTTTTC+CGG | - | chr4.3:15203081-15203100 | None:intergenic | 45.0% |
! | CTGCGGAAACGTCATCTTTT+TGG | + | chr4.3:15203355-15203374 | MS.gene023523:CDS | 45.0% |
! | CTTTGAGTTTACAGCCGTCT+TGG | - | chr4.3:15203702-15203721 | None:intergenic | 45.0% |
! | GCAATATTTTCCCAGAGGTG+AGG | - | chr4.3:15203907-15203926 | None:intergenic | 45.0% |
! | GGTATCGGATTCCTGTGAAT+AGG | - | chr4.3:15203596-15203615 | None:intergenic | 45.0% |
! | GGTTGCCACTTGTACTTGTT+TGG | + | chr4.3:15203247-15203266 | MS.gene023523:CDS | 45.0% |
! | TGCCACTTGTACTTGTTTGG+TGG | + | chr4.3:15203250-15203269 | MS.gene023523:CDS | 45.0% |
!! | ACATGGTTTTTGAAGGGGCT+CGG | + | chr4.3:15203544-15203563 | MS.gene023523:CDS | 45.0% |
!! | TGCGTTTGGTTTGCAAGAGA+TGG | + | chr4.3:15203020-15203039 | MS.gene023523:CDS | 45.0% |
AACTGCCTCTATGTTGCTGG+TGG | + | chr4.3:15203394-15203413 | MS.gene023523:CDS | 50.0% | |
AATATTCCCCAGGAACAGGC+GGG | - | chr4.3:15203192-15203211 | None:intergenic | 50.0% | |
ACAATGGAATGGTCGTGGGA+TGG | + | chr4.3:15203629-15203648 | MS.gene023523:CDS | 50.0% | |
ACGACCCTAATCGGAACAGA+TGG | + | chr4.3:15203461-15203480 | MS.gene023523:CDS | 50.0% | |
ACTGCCTCTATGTTGCTGGT+GGG | + | chr4.3:15203395-15203414 | MS.gene023523:CDS | 50.0% | |
AGATGGTATCGCCTTCTGTC+TGG | + | chr4.3:15203037-15203056 | MS.gene023523:CDS | 50.0% | |
AGGCCTGAAAACAGTAGCTG+GGG | + | chr4.3:15202817-15202836 | MS.gene023523:CDS | 50.0% | |
ATTCCCCACCAGCAACATAG+AGG | - | chr4.3:15203402-15203421 | None:intergenic | 50.0% | |
CAGGCCTGAAAACAGTAGCT+GGG | + | chr4.3:15202816-15202835 | MS.gene023523:CDS | 50.0% | |
CGCCTCATAGATCCCTTCAA+CGG | - | chr4.3:15203283-15203302 | None:intergenic | 50.0% | |
GAATATTCCCCAGGAACAGG+CGG | - | chr4.3:15203193-15203212 | None:intergenic | 50.0% | |
GCAAGATCATCAGGAAGACC+AGG | - | chr4.3:15202956-15202975 | None:intergenic | 50.0% | |
GCTCCGGAAAAGTCTTGGAA+TGG | + | chr4.3:15203075-15203094 | MS.gene023523:CDS | 50.0% | |
GGAGAATATCGCTTCGGTGA+AGG | - | chr4.3:15201799-15201818 | None:intergenic | 50.0% | |
GGTGGAAGAGATCCGTTGAA+GGG | + | chr4.3:15203268-15203287 | MS.gene023523:CDS | 50.0% | |
GTGAAGAAGCCCAACAGCTT+GGG | - | chr4.3:15202250-15202269 | None:intergenic | 50.0% | |
GTTGCTGGTGGGGAATGTAA+AGG | + | chr4.3:15203406-15203425 | MS.gene023523:CDS | 50.0% | |
TAATTGCTGCAAGCGGGGAA+CGG | - | chr4.3:15202591-15202610 | None:intergenic | 50.0% | |
TCAGGAAGACCAGGTAGCAA+AGG | - | chr4.3:15202947-15202966 | None:intergenic | 50.0% | |
TCAGGCCTGAAAACAGTAGC+TGG | + | chr4.3:15202815-15202834 | MS.gene023523:CDS | 50.0% | |
TGACGTTTCCGCAGCATATC+GGG | - | chr4.3:15203349-15203368 | None:intergenic | 50.0% | |
TGGTGGAAGAGATCCGTTGA+AGG | + | chr4.3:15203267-15203286 | MS.gene023523:CDS | 50.0% | |
TGTGAAGAAGCCCAACAGCT+TGG | - | chr4.3:15202251-15202270 | None:intergenic | 50.0% | |
! | AGGTGTGGAACTGGGTATTG+TGG | + | chr4.3:15201833-15201852 | MS.gene023523:intron | 50.0% |
! | GTGTACCCCGAGTTGAACAT+AGG | + | chr4.3:15202993-15203012 | MS.gene023523:CDS | 50.0% |
! | TTTGGCTGTGCCGTTCTTAG+TGG | + | chr4.3:15203226-15203245 | MS.gene023523:CDS | 50.0% |
!! | CATGGTTTTTGAAGGGGCTC+GGG | + | chr4.3:15203545-15203564 | MS.gene023523:CDS | 50.0% |
CTCGGAGATGACCACAGCTA+TGG | + | chr4.3:15203492-15203511 | MS.gene023523:CDS | 55.0% | |
CTGCCTCTATGTTGCTGGTG+GGG | + | chr4.3:15203396-15203415 | MS.gene023523:CDS | 55.0% | |
GCGGGAGGGATTGCCATATT+TGG | - | chr4.3:15203174-15203193 | None:intergenic | 55.0% | |
GGAAGACCAGGTAGCAAAGG+AGG | - | chr4.3:15202944-15202963 | None:intergenic | 55.0% | |
GTTCAGCCTCCTTTGCTACC+TGG | + | chr4.3:15202935-15202954 | MS.gene023523:CDS | 55.0% | |
TGAAAACAGTAGCTGGGGCG+AGG | + | chr4.3:15202822-15202841 | MS.gene023523:CDS | 55.0% | |
TTGCTGGAAAGGGTCCTGTC+AGG | + | chr4.3:15203923-15203942 | MS.gene023523:CDS | 55.0% | |
! | ACAGAGCACCCGATATGCTG+CGG | + | chr4.3:15203338-15203357 | MS.gene023523:CDS | 55.0% |
! | TCGCCCCAGCTACTGTTTTC+AGG | - | chr4.3:15202823-15202842 | None:intergenic | 55.0% |
AATCCCTCCCGCCTGTTCCT+GGG | + | chr4.3:15203182-15203201 | MS.gene023523:CDS | 60.0% | |
TGGTCTACTATCGCAGGGCG+CGG | + | chr4.3:15203964-15203983 | MS.gene023523:CDS | 60.0% | |
! | GGGGCGAGGAAGTTTGTTCC+AGG | + | chr4.3:15202836-15202855 | MS.gene023523:CDS | 60.0% |
ATCCCTCCCGCCTGTTCCTG+GGG | + | chr4.3:15203183-15203202 | MS.gene023523:CDS | 65.0% | |
ATTCCCCAGGAACAGGCGGG+AGG | - | chr4.3:15203189-15203208 | None:intergenic | 65.0% | |
CAATCCCTCCCGCCTGTTCC+TGG | + | chr4.3:15203181-15203200 | MS.gene023523:CDS | 65.0% | |
TCTACTATCGCAGGGCGCGG+TGG | + | chr4.3:15203967-15203986 | MS.gene023523:CDS | 65.0% | |
TTCCCCAGGAACAGGCGGGA+GGG | - | chr4.3:15203188-15203207 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 15201760 | 15204032 | 15201760 | ID=MS.gene023523 |
chr4.3 | mRNA | 15201760 | 15204032 | 15201760 | ID=MS.gene023523.t1;Parent=MS.gene023523 |
chr4.3 | exon | 15201760 | 15201834 | 15201760 | ID=MS.gene023523.t1.exon1;Parent=MS.gene023523.t1 |
chr4.3 | CDS | 15201760 | 15201834 | 15201760 | ID=cds.MS.gene023523.t1;Parent=MS.gene023523.t1 |
chr4.3 | exon | 15202032 | 15202185 | 15202032 | ID=MS.gene023523.t1.exon2;Parent=MS.gene023523.t1 |
chr4.3 | CDS | 15202032 | 15202185 | 15202032 | ID=cds.MS.gene023523.t1;Parent=MS.gene023523.t1 |
chr4.3 | exon | 15202247 | 15202303 | 15202247 | ID=MS.gene023523.t1.exon3;Parent=MS.gene023523.t1 |
chr4.3 | CDS | 15202247 | 15202303 | 15202247 | ID=cds.MS.gene023523.t1;Parent=MS.gene023523.t1 |
chr4.3 | exon | 15202401 | 15202451 | 15202401 | ID=MS.gene023523.t1.exon4;Parent=MS.gene023523.t1 |
chr4.3 | CDS | 15202401 | 15202451 | 15202401 | ID=cds.MS.gene023523.t1;Parent=MS.gene023523.t1 |
chr4.3 | exon | 15202768 | 15204032 | 15202768 | ID=MS.gene023523.t1.exon5;Parent=MS.gene023523.t1 |
chr4.3 | CDS | 15202768 | 15204032 | 15202768 | ID=cds.MS.gene023523.t1;Parent=MS.gene023523.t1 |
Gene Sequence |
Protein sequence |