Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67151.t1 | XP_013466018.1 | 99.3 | 303 | 2 | 0 | 1 | 303 | 123 | 425 | 4.60E-170 | 607.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67151.t1 | Q9SX80 | 71.0 | 307 | 82 | 5 | 1 | 303 | 131 | 434 | 1.6e-115 | 417.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67151.t1 | A0A072VF33 | 99.3 | 303 | 2 | 0 | 1 | 303 | 123 | 425 | 3.3e-170 | 607.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057052 | MS.gene67151 | 0.839405 | 1.62E-57 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67151.t1 | MTR_1g020080 | 99.340 | 303 | 2 | 0 | 1 | 303 | 123 | 425 | 0.0 | 624 |
MS.gene67151.t1 | MTR_1g020080 | 27.136 | 199 | 115 | 6 | 64 | 246 | 93 | 277 | 3.78e-13 | 69.7 |
MS.gene67151.t1 | MTR_3g101370 | 78.431 | 306 | 59 | 5 | 1 | 303 | 119 | 420 | 1.14e-168 | 474 |
MS.gene67151.t1 | MTR_3g101370 | 27.513 | 189 | 115 | 6 | 61 | 240 | 86 | 261 | 1.77e-13 | 70.9 |
MS.gene67151.t1 | MTR_4g086600 | 66.058 | 274 | 73 | 3 | 1 | 254 | 142 | 415 | 1.49e-125 | 366 |
MS.gene67151.t1 | MTR_1g020080 | 96.111 | 180 | 7 | 0 | 1 | 180 | 123 | 302 | 1.76e-122 | 353 |
MS.gene67151.t1 | MTR_1g020080 | 26.396 | 197 | 119 | 5 | 64 | 246 | 93 | 277 | 5.37e-13 | 68.6 |
MS.gene67151.t1 | MTR_4g131970 | 57.655 | 307 | 108 | 6 | 1 | 292 | 100 | 399 | 3.15e-111 | 328 |
MS.gene67151.t1 | MTR_2g022950 | 56.908 | 304 | 121 | 4 | 1 | 295 | 86 | 388 | 1.07e-109 | 324 |
MS.gene67151.t1 | MTR_2g097960 | 50.479 | 313 | 123 | 4 | 1 | 284 | 41 | 350 | 1.87e-103 | 309 |
MS.gene67151.t1 | MTR_3g101370 | 79.545 | 176 | 35 | 1 | 1 | 175 | 119 | 294 | 6.49e-96 | 285 |
MS.gene67151.t1 | MTR_3g101370 | 28.125 | 192 | 113 | 7 | 58 | 240 | 86 | 261 | 1.12e-13 | 70.5 |
MS.gene67151.t1 | MTR_2g022950 | 58.791 | 182 | 70 | 3 | 1 | 177 | 86 | 267 | 6.14e-63 | 200 |
MS.gene67151.t1 | MTR_2g022950 | 26.316 | 190 | 117 | 6 | 69 | 247 | 61 | 238 | 7.77e-13 | 67.8 |
MS.gene67151.t1 | MTR_2g022950 | 63.057 | 157 | 56 | 1 | 1 | 155 | 86 | 242 | 1.42e-62 | 199 |
MS.gene67151.t1 | MTR_2g022950 | 26.316 | 190 | 117 | 6 | 69 | 247 | 61 | 238 | 1.02e-12 | 67.4 |
MS.gene67151.t1 | MTR_3g109090 | 31.579 | 266 | 153 | 6 | 1 | 246 | 70 | 326 | 6.02e-34 | 128 |
MS.gene67151.t1 | MTR_3g109090 | 25.532 | 188 | 114 | 4 | 61 | 242 | 37 | 204 | 2.06e-12 | 67.4 |
MS.gene67151.t1 | MTR_3g109090 | 31.579 | 266 | 153 | 6 | 1 | 246 | 86 | 342 | 6.61e-34 | 129 |
MS.gene67151.t1 | MTR_3g109090 | 25.532 | 188 | 114 | 4 | 61 | 242 | 53 | 220 | 1.83e-12 | 67.8 |
MS.gene67151.t1 | MTR_4g124940 | 31.321 | 265 | 154 | 9 | 1 | 246 | 72 | 327 | 1.48e-30 | 119 |
MS.gene67151.t1 | MTR_4g124940 | 27.513 | 189 | 111 | 4 | 61 | 243 | 39 | 207 | 2.57e-14 | 73.2 |
MS.gene67151.t1 | MTR_8g022050 | 30.597 | 268 | 153 | 10 | 1 | 246 | 88 | 344 | 4.98e-27 | 109 |
MS.gene67151.t1 | MTR_8g022050 | 27.128 | 188 | 111 | 4 | 61 | 242 | 55 | 222 | 1.12e-14 | 74.3 |
MS.gene67151.t1 | MTR_4g085540 | 29.389 | 262 | 168 | 7 | 1 | 253 | 148 | 401 | 1.02e-26 | 110 |
MS.gene67151.t1 | MTR_4g085540 | 32.222 | 180 | 100 | 4 | 64 | 238 | 30 | 192 | 5.90e-20 | 90.5 |
MS.gene67151.t1 | MTR_1g019150 | 28.958 | 259 | 174 | 6 | 1 | 253 | 146 | 400 | 1.97e-24 | 103 |
MS.gene67151.t1 | MTR_1g019150 | 27.311 | 238 | 149 | 7 | 1 | 233 | 58 | 276 | 1.01e-17 | 84.0 |
MS.gene67151.t1 | MTR_3g102040 | 26.374 | 273 | 191 | 6 | 1 | 267 | 138 | 406 | 4.73e-22 | 96.7 |
MS.gene67151.t1 | MTR_3g102040 | 31.492 | 181 | 102 | 4 | 63 | 238 | 19 | 182 | 2.19e-19 | 88.6 |
MS.gene67151.t1 | MTR_3g102040 | 31.064 | 235 | 138 | 8 | 1 | 230 | 50 | 265 | 1.33e-17 | 83.6 |
MS.gene67151.t1 | MTR_1g097440 | 31.873 | 251 | 142 | 11 | 1 | 244 | 56 | 284 | 7.76e-22 | 95.9 |
MS.gene67151.t1 | MTR_1g097440 | 22.581 | 248 | 183 | 5 | 12 | 253 | 154 | 398 | 2.26e-16 | 79.7 |
MS.gene67151.t1 | MTR_1g097440 | 26.816 | 179 | 109 | 4 | 69 | 242 | 31 | 192 | 1.04e-12 | 68.9 |
MS.gene67151.t1 | MTR_7g102730 | 26.538 | 260 | 157 | 8 | 1 | 250 | 36 | 271 | 2.40e-21 | 94.4 |
MS.gene67151.t1 | MTR_7g102730 | 27.711 | 249 | 171 | 5 | 1 | 244 | 124 | 368 | 1.95e-20 | 92.0 |
MS.gene67151.t1 | MTR_7g102730 | 26.291 | 213 | 114 | 6 | 66 | 255 | 8 | 200 | 9.39e-15 | 75.1 |
MS.gene67151.t1 | MTR_1g061870 | 24.903 | 257 | 165 | 8 | 1 | 250 | 41 | 276 | 6.75e-18 | 84.3 |
MS.gene67151.t1 | MTR_1g061870 | 27.429 | 175 | 105 | 4 | 69 | 238 | 16 | 173 | 7.97e-14 | 72.0 |
MS.gene67151.t1 | MTR_1g061870 | 27.049 | 244 | 151 | 8 | 1 | 232 | 129 | 357 | 1.26e-12 | 68.6 |
MS.gene67151.t1 | MTR_6g040070 | 25.097 | 259 | 183 | 6 | 1 | 253 | 41 | 294 | 1.47e-17 | 83.6 |
MS.gene67151.t1 | MTR_6g040070 | 32.738 | 168 | 93 | 5 | 69 | 231 | 16 | 168 | 1.49e-15 | 77.4 |
MS.gene67151.t1 | MTR_6g040190 | 29.050 | 179 | 105 | 4 | 69 | 242 | 26 | 187 | 2.10e-17 | 82.8 |
MS.gene67151.t1 | MTR_6g040190 | 23.552 | 259 | 184 | 7 | 1 | 253 | 139 | 389 | 1.83e-14 | 73.9 |
MS.gene67151.t1 | MTR_4g104470 | 27.225 | 191 | 122 | 3 | 67 | 251 | 121 | 300 | 2.53e-16 | 78.2 |
MS.gene67151.t1 | MTR_4g104470 | 30.818 | 159 | 86 | 5 | 5 | 150 | 152 | 299 | 1.04e-13 | 70.5 |
MS.gene67151.t1 | MTR_1g080150 | 36.782 | 87 | 54 | 1 | 67 | 153 | 131 | 216 | 1.33e-14 | 72.4 |
MS.gene67151.t1 | MTR_1g064230 | 26.761 | 213 | 139 | 4 | 54 | 251 | 70 | 280 | 1.94e-14 | 72.4 |
MS.gene67151.t1 | MTR_3g065190 | 28.108 | 185 | 124 | 4 | 1 | 182 | 51 | 229 | 2.63e-14 | 73.2 |
MS.gene67151.t1 | MTR_3g065190 | 24.000 | 200 | 123 | 5 | 58 | 250 | 15 | 192 | 1.92e-12 | 67.4 |
MS.gene67151.t1 | MTR_5g097580 | 29.885 | 174 | 107 | 5 | 70 | 233 | 8 | 176 | 6.08e-14 | 72.4 |
MS.gene67151.t1 | MTR_5g097580 | 29.885 | 174 | 107 | 5 | 70 | 233 | 8 | 176 | 7.29e-14 | 72.0 |
MS.gene67151.t1 | MTR_3g075500 | 30.435 | 161 | 89 | 4 | 5 | 152 | 139 | 289 | 1.10e-13 | 70.5 |
MS.gene67151.t1 | MTR_3g075500 | 26.519 | 181 | 119 | 3 | 67 | 241 | 108 | 280 | 9.94e-13 | 67.8 |
MS.gene67151.t1 | MTR_3g079200 | 40.260 | 77 | 45 | 1 | 169 | 244 | 224 | 300 | 1.59e-13 | 71.2 |
MS.gene67151.t1 | MTR_2g026180 | 30.682 | 176 | 105 | 6 | 70 | 233 | 6 | 176 | 2.19e-13 | 70.5 |
MS.gene67151.t1 | MTR_7g118120 | 22.656 | 256 | 169 | 6 | 1 | 250 | 130 | 362 | 2.33e-13 | 70.5 |
MS.gene67151.t1 | MTR_1g045510 | 30.667 | 150 | 95 | 4 | 4 | 150 | 142 | 285 | 2.45e-13 | 69.3 |
MS.gene67151.t1 | MTR_3g055990 | 28.736 | 174 | 109 | 5 | 70 | 233 | 8 | 176 | 3.66e-13 | 70.1 |
MS.gene67151.t1 | MTR_3g055990 | 28.736 | 174 | 109 | 5 | 70 | 233 | 8 | 176 | 3.81e-13 | 69.7 |
MS.gene67151.t1 | MTR_8g092550 | 27.778 | 180 | 118 | 6 | 69 | 241 | 203 | 377 | 5.88e-13 | 69.3 |
MS.gene67151.t1 | MTR_1g056520 | 28.402 | 169 | 109 | 4 | 1 | 160 | 134 | 299 | 1.81e-12 | 67.0 |
MS.gene67151.t1 | MTR_3g095230 | 26.630 | 184 | 116 | 7 | 69 | 241 | 216 | 391 | 8.93e-12 | 65.9 |
MS.gene67151.t1 | MTR_4g068120 | 27.619 | 210 | 120 | 6 | 69 | 275 | 28 | 208 | 9.05e-12 | 66.2 |
MS.gene67151.t1 | MTR_7g094660 | 25.134 | 187 | 124 | 4 | 55 | 233 | 628 | 806 | 1.08e-11 | 65.9 |
MS.gene67151.t1 | MTR_3g095230 | 26.630 | 184 | 116 | 7 | 69 | 241 | 216 | 391 | 1.08e-11 | 65.5 |
MS.gene67151.t1 | MTR_3g103420 | 26.257 | 179 | 118 | 4 | 70 | 237 | 12 | 187 | 1.54e-11 | 64.7 |
MS.gene67151.t1 | MTR_3g027140 | 26.111 | 180 | 117 | 5 | 70 | 241 | 62 | 233 | 1.83e-11 | 63.2 |
MS.gene67151.t1 | MTR_4g122650 | 25.446 | 224 | 138 | 7 | 70 | 282 | 90 | 295 | 4.38e-11 | 63.9 |
MS.gene67151.t1 | MTR_3g075500 | 26.471 | 170 | 111 | 3 | 67 | 230 | 108 | 269 | 6.50e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67151.t1 | AT1G47500 | 71.010 | 307 | 82 | 5 | 1 | 303 | 131 | 434 | 3.84e-151 | 431 |
MS.gene67151.t1 | AT1G47500 | 27.273 | 187 | 114 | 6 | 64 | 240 | 99 | 273 | 9.74e-14 | 71.6 |
MS.gene67151.t1 | AT1G47490 | 70.358 | 307 | 84 | 5 | 1 | 303 | 129 | 432 | 1.52e-150 | 429 |
MS.gene67151.t1 | AT3G19130 | 64.388 | 278 | 82 | 5 | 1 | 262 | 134 | 410 | 1.53e-121 | 355 |
MS.gene67151.t1 | AT1G49600 | 61.824 | 296 | 96 | 6 | 1 | 285 | 145 | 434 | 1.30e-120 | 353 |
MS.gene67151.t1 | AT1G49600 | 30.208 | 192 | 110 | 7 | 58 | 240 | 111 | 287 | 1.49e-14 | 73.9 |
MS.gene67151.t1 | AT1G49600 | 66.016 | 256 | 77 | 3 | 1 | 246 | 145 | 400 | 8.20e-117 | 344 |
MS.gene67151.t1 | AT1G49600 | 30.208 | 192 | 110 | 7 | 58 | 240 | 111 | 287 | 4.47e-15 | 75.5 |
MS.gene67151.t1 | AT1G49600 | 66.016 | 256 | 77 | 3 | 1 | 246 | 145 | 400 | 8.20e-117 | 344 |
MS.gene67151.t1 | AT1G49600 | 30.208 | 192 | 110 | 7 | 58 | 240 | 111 | 287 | 4.47e-15 | 75.5 |
MS.gene67151.t1 | AT1G11650 | 61.111 | 252 | 95 | 3 | 1 | 250 | 88 | 338 | 1.33e-102 | 306 |
MS.gene67151.t1 | AT4G27000 | 58.498 | 253 | 105 | 0 | 2 | 254 | 107 | 359 | 4.73e-102 | 305 |
MS.gene67151.t1 | AT5G54900 | 55.245 | 286 | 122 | 5 | 2 | 283 | 87 | 370 | 3.04e-99 | 297 |
MS.gene67151.t1 | AT5G19350 | 52.941 | 306 | 124 | 5 | 1 | 292 | 50 | 349 | 2.97e-98 | 295 |
MS.gene67151.t1 | AT5G19350 | 51.935 | 310 | 125 | 5 | 1 | 292 | 50 | 353 | 1.82e-97 | 293 |
MS.gene67151.t1 | AT1G11650 | 60.909 | 220 | 83 | 3 | 1 | 218 | 88 | 306 | 1.64e-88 | 266 |
MS.gene67151.t1 | AT1G11650 | 27.473 | 182 | 107 | 6 | 69 | 240 | 63 | 229 | 5.37e-12 | 65.9 |
MS.gene67151.t1 | AT1G47490 | 68.889 | 180 | 53 | 2 | 1 | 177 | 129 | 308 | 1.23e-82 | 252 |
MS.gene67151.t1 | AT1G47490 | 28.022 | 182 | 109 | 6 | 69 | 240 | 102 | 271 | 7.30e-15 | 73.9 |
MS.gene67151.t1 | AT1G47500 | 69.274 | 179 | 52 | 2 | 1 | 176 | 131 | 309 | 2.16e-81 | 249 |
MS.gene67151.t1 | AT1G47500 | 27.473 | 182 | 110 | 6 | 69 | 240 | 104 | 273 | 1.25e-13 | 70.5 |
MS.gene67151.t1 | AT1G54080 | 34.586 | 266 | 145 | 11 | 1 | 246 | 89 | 345 | 1.63e-33 | 127 |
MS.gene67151.t1 | AT1G54080 | 26.984 | 189 | 112 | 4 | 61 | 243 | 56 | 224 | 8.04e-17 | 80.9 |
MS.gene67151.t1 | AT1G54080 | 34.686 | 271 | 142 | 12 | 1 | 246 | 89 | 349 | 1.30e-32 | 125 |
MS.gene67151.t1 | AT1G54080 | 27.461 | 193 | 110 | 4 | 61 | 243 | 56 | 228 | 1.92e-16 | 79.7 |
MS.gene67151.t1 | AT3G14100 | 32.331 | 266 | 151 | 9 | 1 | 246 | 85 | 341 | 1.70e-31 | 122 |
MS.gene67151.t1 | AT3G14100 | 27.513 | 189 | 111 | 4 | 61 | 243 | 52 | 220 | 2.11e-17 | 82.4 |
MS.gene67151.t1 | AT1G17370 | 32.075 | 265 | 150 | 10 | 1 | 246 | 80 | 333 | 2.03e-30 | 119 |
MS.gene67151.t1 | AT1G17370 | 27.660 | 188 | 110 | 4 | 61 | 242 | 47 | 214 | 5.97e-16 | 78.2 |
MS.gene67151.t1 | AT1G17370 | 31.716 | 268 | 150 | 10 | 1 | 246 | 80 | 336 | 5.47e-30 | 117 |
MS.gene67151.t1 | AT1G17370 | 27.660 | 188 | 110 | 4 | 61 | 242 | 47 | 214 | 6.51e-16 | 78.2 |
MS.gene67151.t1 | AT1G71770 | 28.076 | 317 | 197 | 11 | 1 | 301 | 172 | 473 | 1.38e-25 | 107 |
MS.gene67151.t1 | AT1G71770 | 30.043 | 233 | 133 | 8 | 15 | 238 | 98 | 309 | 1.16e-21 | 95.5 |
MS.gene67151.t1 | AT1G71770 | 31.429 | 175 | 97 | 5 | 69 | 238 | 60 | 216 | 3.03e-17 | 82.4 |
MS.gene67151.t1 | AT1G71770 | 28.076 | 317 | 197 | 11 | 1 | 301 | 172 | 473 | 1.38e-25 | 107 |
MS.gene67151.t1 | AT1G71770 | 30.043 | 233 | 133 | 8 | 15 | 238 | 98 | 309 | 1.16e-21 | 95.5 |
MS.gene67151.t1 | AT1G71770 | 31.429 | 175 | 97 | 5 | 69 | 238 | 60 | 216 | 3.03e-17 | 82.4 |
MS.gene67151.t1 | AT2G23350 | 28.788 | 264 | 167 | 9 | 1 | 253 | 160 | 413 | 2.48e-24 | 103 |
MS.gene67151.t1 | AT2G23350 | 31.092 | 238 | 134 | 9 | 1 | 230 | 72 | 287 | 4.39e-19 | 87.8 |
MS.gene67151.t1 | AT2G23350 | 30.286 | 175 | 100 | 3 | 69 | 238 | 47 | 204 | 1.87e-15 | 77.0 |
MS.gene67151.t1 | AT4G34110 | 28.295 | 258 | 176 | 6 | 1 | 253 | 150 | 403 | 2.58e-24 | 103 |
MS.gene67151.t1 | AT4G34110 | 30.000 | 240 | 134 | 9 | 1 | 230 | 62 | 277 | 1.39e-21 | 95.1 |
MS.gene67151.t1 | AT4G34110 | 32.000 | 175 | 97 | 4 | 69 | 238 | 37 | 194 | 2.14e-19 | 89.0 |
MS.gene67151.t1 | AT1G34140 | 25.347 | 288 | 188 | 8 | 1 | 282 | 57 | 323 | 4.36e-23 | 98.6 |
MS.gene67151.t1 | AT1G49760 | 27.799 | 259 | 176 | 6 | 1 | 253 | 159 | 412 | 2.56e-22 | 97.4 |
MS.gene67151.t1 | AT1G49760 | 32.000 | 175 | 97 | 4 | 69 | 238 | 46 | 203 | 4.99e-18 | 84.7 |
MS.gene67151.t1 | AT1G49760 | 27.799 | 259 | 176 | 6 | 1 | 253 | 159 | 412 | 2.56e-22 | 97.4 |
MS.gene67151.t1 | AT1G49760 | 32.000 | 175 | 97 | 4 | 69 | 238 | 46 | 203 | 4.99e-18 | 84.7 |
MS.gene67151.t1 | AT1G22760 | 27.490 | 251 | 171 | 6 | 1 | 244 | 162 | 408 | 1.73e-21 | 95.1 |
MS.gene67151.t1 | AT1G22760 | 27.755 | 245 | 150 | 10 | 1 | 238 | 75 | 299 | 7.47e-18 | 84.3 |
MS.gene67151.t1 | AT3G16380 | 28.340 | 247 | 159 | 8 | 1 | 238 | 138 | 375 | 2.33e-18 | 85.5 |
MS.gene67151.t1 | AT3G16380 | 27.642 | 246 | 150 | 8 | 1 | 238 | 47 | 272 | 2.79e-18 | 85.5 |
MS.gene67151.t1 | AT3G16380 | 28.994 | 169 | 102 | 3 | 69 | 233 | 22 | 176 | 8.02e-13 | 68.9 |
MS.gene67151.t1 | AT2G37220 | 28.218 | 202 | 128 | 5 | 66 | 251 | 89 | 289 | 3.67e-18 | 83.2 |
MS.gene67151.t1 | AT2G36660 | 23.529 | 255 | 169 | 7 | 1 | 250 | 50 | 283 | 7.51e-18 | 84.3 |
MS.gene67151.t1 | AT2G36660 | 24.904 | 261 | 183 | 7 | 1 | 255 | 138 | 391 | 1.47e-15 | 77.4 |
MS.gene67151.t1 | AT2G36660 | 26.286 | 175 | 107 | 4 | 69 | 238 | 25 | 182 | 2.82e-14 | 73.6 |
MS.gene67151.t1 | AT3G04500 | 33.945 | 109 | 66 | 2 | 67 | 175 | 136 | 238 | 1.71e-15 | 75.1 |
MS.gene67151.t1 | AT4G14300 | 32.022 | 178 | 106 | 6 | 70 | 237 | 8 | 180 | 1.46e-14 | 73.9 |
MS.gene67151.t1 | AT4G14300 | 32.022 | 178 | 106 | 6 | 70 | 237 | 8 | 180 | 1.46e-14 | 73.9 |
MS.gene67151.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 70 | 284 | 8 | 236 | 1.98e-14 | 73.6 |
MS.gene67151.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 70 | 284 | 8 | 236 | 1.98e-14 | 73.6 |
MS.gene67151.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 70 | 284 | 8 | 236 | 1.98e-14 | 73.6 |
MS.gene67151.t1 | AT3G07810 | 31.250 | 176 | 104 | 6 | 70 | 233 | 8 | 178 | 5.16e-14 | 72.4 |
MS.gene67151.t1 | AT1G07360 | 39.506 | 81 | 48 | 1 | 165 | 244 | 220 | 300 | 5.30e-14 | 72.4 |
MS.gene67151.t1 | AT3G07810 | 31.250 | 176 | 104 | 6 | 70 | 233 | 8 | 178 | 5.46e-14 | 72.4 |
MS.gene67151.t1 | AT3G13224 | 27.072 | 181 | 110 | 5 | 70 | 243 | 21 | 186 | 8.18e-14 | 70.1 |
MS.gene67151.t1 | AT2G29580 | 38.272 | 81 | 49 | 1 | 165 | 244 | 220 | 300 | 1.99e-13 | 70.9 |
MS.gene67151.t1 | AT3G13224 | 27.119 | 177 | 106 | 5 | 63 | 233 | 14 | 173 | 5.39e-13 | 68.9 |
MS.gene67151.t1 | AT3G13224 | 28.667 | 150 | 103 | 2 | 1 | 150 | 45 | 190 | 1.09e-12 | 68.2 |
MS.gene67151.t1 | AT3G13224 | 27.647 | 170 | 100 | 5 | 70 | 233 | 12 | 164 | 6.58e-13 | 68.9 |
MS.gene67151.t1 | AT3G13224 | 28.667 | 150 | 103 | 2 | 1 | 150 | 36 | 181 | 1.12e-12 | 68.2 |
MS.gene67151.t1 | AT4G00830 | 22.182 | 275 | 180 | 7 | 1 | 267 | 142 | 390 | 1.11e-12 | 68.6 |
MS.gene67151.t1 | AT4G00830 | 22.182 | 275 | 180 | 7 | 1 | 267 | 142 | 390 | 1.11e-12 | 68.6 |
MS.gene67151.t1 | AT4G00830 | 22.182 | 275 | 180 | 7 | 1 | 267 | 142 | 390 | 1.11e-12 | 68.6 |
MS.gene67151.t1 | AT2G18510 | 26.437 | 174 | 117 | 4 | 1 | 174 | 51 | 213 | 1.22e-12 | 68.2 |
MS.gene67151.t1 | AT1G58470 | 26.538 | 260 | 140 | 11 | 70 | 290 | 8 | 255 | 1.28e-12 | 67.8 |
MS.gene67151.t1 | AT1G58470 | 26.538 | 260 | 140 | 11 | 70 | 290 | 8 | 255 | 1.28e-12 | 67.8 |
MS.gene67151.t1 | AT5G47620 | 27.799 | 259 | 135 | 13 | 70 | 284 | 8 | 258 | 1.37e-12 | 68.2 |
MS.gene67151.t1 | AT5G50250 | 25.424 | 177 | 115 | 3 | 70 | 240 | 115 | 280 | 2.55e-12 | 66.6 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.43e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.43e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.43e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.43e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.43e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.57e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.57e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.57e-12 | 67.0 |
MS.gene67151.t1 | AT5G55550 | 27.841 | 176 | 112 | 5 | 70 | 233 | 8 | 180 | 3.57e-12 | 67.0 |
MS.gene67151.t1 | AT1G60000 | 30.263 | 152 | 92 | 4 | 4 | 149 | 114 | 257 | 7.09e-12 | 64.7 |
MS.gene67151.t1 | AT3G52380 | 27.273 | 165 | 97 | 4 | 1 | 149 | 142 | 299 | 8.44e-12 | 65.5 |
MS.gene67151.t1 | AT3G52380 | 25.556 | 180 | 126 | 3 | 70 | 243 | 118 | 295 | 7.18e-11 | 62.4 |
MS.gene67151.t1 | AT4G24770 | 25.424 | 177 | 115 | 3 | 70 | 240 | 152 | 317 | 3.48e-11 | 63.5 |
MS.gene67151.t1 | AT4G24770 | 25.424 | 177 | 115 | 3 | 70 | 240 | 152 | 317 | 3.48e-11 | 63.5 |
MS.gene67151.t1 | AT3G52150 | 25.843 | 178 | 120 | 5 | 70 | 240 | 78 | 250 | 3.61e-11 | 62.8 |
MS.gene67151.t1 | AT3G52150 | 25.843 | 178 | 120 | 5 | 70 | 240 | 78 | 250 | 3.61e-11 | 62.8 |
MS.gene67151.t1 | AT4G13850 | 35.556 | 90 | 57 | 1 | 61 | 150 | 28 | 116 | 4.64e-11 | 60.1 |
MS.gene67151.t1 | AT4G13850 | 35.165 | 91 | 58 | 1 | 61 | 151 | 28 | 117 | 5.24e-11 | 60.1 |
MS.gene67151.t1 | AT4G13850 | 35.165 | 91 | 58 | 1 | 61 | 151 | 28 | 117 | 6.28e-11 | 60.1 |
MS.gene67151.t1 | AT3G23830 | 39.024 | 82 | 49 | 1 | 70 | 151 | 37 | 117 | 6.84e-11 | 59.7 |
MS.gene67151.t1 | AT3G23830 | 39.024 | 82 | 49 | 1 | 70 | 151 | 37 | 117 | 6.84e-11 | 59.7 |
MS.gene67151.t1 | AT4G13850 | 35.165 | 91 | 58 | 1 | 61 | 151 | 28 | 117 | 6.92e-11 | 60.1 |
Find 83 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCCATATCCATCATAAAT+AGG | 0.205271 | 1.2:+3699403 | None:intergenic |
TATGGCGGTTACCCTATTTA+TGG | 0.216233 | 1.2:-3699334 | MS.gene67151:CDS |
ACTTGTACCTGTTTGCAAAT+TGG | 0.251629 | 1.2:+3699794 | None:intergenic |
TGTGAGTGGCCTCCATAAAT+AGG | 0.276662 | 1.2:+3699322 | None:intergenic |
TAAATAGGGGATGGAAAATA+TGG | 0.277141 | 1.2:+3699418 | None:intergenic |
ATCCATATCCATCATAAATA+GGG | 0.292778 | 1.2:+3699404 | None:intergenic |
TCCCCTATTTATGATGGATA+TGG | 0.317090 | 1.2:-3699406 | MS.gene67151:CDS |
ATCAAGCTTTCCGTTTGAAC+TGG | 0.327481 | 1.2:-3701186 | MS.gene67151:CDS |
AGCAAACTGTTCGTCTCTCT+TGG | 0.360690 | 1.2:-3699630 | MS.gene67151:CDS |
AGCGGTATTTCAGAGGGTTA+TGG | 0.369552 | 1.2:-3701286 | MS.gene67151:CDS |
GCAAACTGTTCGTCTCTCTT+GGG | 0.373848 | 1.2:-3699629 | MS.gene67151:CDS |
GTTGTTTATGATGCCAATAC+TGG | 0.378361 | 1.2:-3701022 | MS.gene67151:CDS |
AGTATGTATCCTCTAGCTTA+TGG | 0.383103 | 1.2:-3699352 | MS.gene67151:CDS |
CGGAAAGCTTGATCAGCATT+TGG | 0.391386 | 1.2:+3701196 | None:intergenic |
GATTCATTATAGATATTTGT+TGG | 0.410964 | 1.2:-3699922 | MS.gene67151:intron |
TTCAGAGGGTTATGGATTTG+TGG | 0.411843 | 1.2:-3701278 | MS.gene67151:CDS |
TTTCCATCCCCTATTTATGA+TGG | 0.416044 | 1.2:-3699412 | MS.gene67151:CDS |
TTAGGCTTGATGTTGGAAGC+TGG | 0.420421 | 1.2:-3699447 | MS.gene67151:CDS |
AAGCAGACATTCTCTCAGTA+TGG | 0.431532 | 1.2:-3699865 | MS.gene67151:CDS |
CCGCAATCCAGCATATAAAC+AGG | 0.437492 | 1.2:-3699605 | MS.gene67151:intron |
GGCTATGGATTCGTCAGGTT+CGG | 0.440915 | 1.2:-3700989 | MS.gene67151:CDS |
GCCCTTTGAACGGCCAGTAT+TGG | 0.441892 | 1.2:+3701009 | None:intergenic |
GAGATTGCCTGTTTATATGC+TGG | 0.442204 | 1.2:+3699598 | None:intergenic |
GCCAATACTGGCCGTTCAAA+GGG | 0.443933 | 1.2:-3701010 | MS.gene67151:CDS |
AAGCTAAACGGGACAATGAT+TGG | 0.446192 | 1.2:-3699655 | MS.gene67151:CDS |
AGGCTTTGCAGAAGCTAAAC+GGG | 0.447114 | 1.2:-3699666 | MS.gene67151:CDS |
GAGGCTTTGCAGAAGCTAAA+CGG | 0.454111 | 1.2:-3699667 | MS.gene67151:CDS |
GATTTGGCATACCTTGTTGA+TGG | 0.463014 | 1.2:+3700864 | None:intergenic |
AGAATCTGCTTCAGATTGGC+TGG | 0.467448 | 1.2:+3700039 | None:intergenic |
TCTAGCAGGCCCATGCGTAT+TGG | 0.469784 | 1.2:-3700914 | MS.gene67151:CDS |
AAACCACAGCCCTTACCAAC+AGG | 0.471104 | 1.2:+3699820 | None:intergenic |
TATTTAGGAGGTCAGTCAAA+TGG | 0.473194 | 1.2:-3700067 | MS.gene67151:intron |
GTGAGTGGCCTCCATAAATA+GGG | 0.473583 | 1.2:+3699323 | None:intergenic |
GCAACTCCAAGGAAATCATC+TGG | 0.473764 | 1.2:-3700887 | MS.gene67151:CDS |
CAAAGGGCTATGGATTCGTC+AGG | 0.476987 | 1.2:-3700994 | MS.gene67151:CDS |
TTTCAGAAATAATGCTGAAG+AGG | 0.476993 | 1.2:-3699686 | MS.gene67151:intron |
TAGGCTTGATGTTGGAAGCT+GGG | 0.480961 | 1.2:-3699446 | MS.gene67151:CDS |
TGATGGCCAGATGATTTCCT+TGG | 0.482556 | 1.2:+3700881 | None:intergenic |
TGTTAAGATACCTGTTGGTA+AGG | 0.488145 | 1.2:-3699830 | MS.gene67151:CDS |
CTTGATGTTGGAAGCTGGGC+CGG | 0.489214 | 1.2:-3699442 | MS.gene67151:CDS |
TAAGCTAGAGGATACATACT+TGG | 0.497605 | 1.2:+3699355 | None:intergenic |
TGCCAATACTGGCCGTTCAA+AGG | 0.499946 | 1.2:-3701011 | MS.gene67151:CDS |
ATCAGCTTACTTGTTGTGAG+TGG | 0.507595 | 1.2:+3699308 | None:intergenic |
ATACCTGTTGGTAAGGGCTG+TGG | 0.509634 | 1.2:-3699823 | MS.gene67151:CDS |
AGATGAAAGCGAGAGATCTC+AGG | 0.512411 | 1.2:-3700966 | MS.gene67151:CDS |
TTGTAGAATCTGCTTCAGAT+TGG | 0.518743 | 1.2:+3700035 | None:intergenic |
AACATTTAGCACAGGAGACA+AGG | 0.521571 | 1.2:-3701161 | MS.gene67151:CDS |
TCAAGCTTTCCGTTTGAACT+GGG | 0.522222 | 1.2:-3701185 | MS.gene67151:CDS |
TAAATGTTGCCCAGTTCAAA+CGG | 0.531857 | 1.2:+3701176 | None:intergenic |
CTGTAAAACTTTCTCAGCTG+TGG | 0.534907 | 1.2:+3701240 | None:intergenic |
ACTGGCCGTTCAAAGGGCTA+TGG | 0.536195 | 1.2:-3701004 | MS.gene67151:CDS |
AACTGGGCAACATTTAGCAC+AGG | 0.537123 | 1.2:-3701169 | MS.gene67151:CDS |
TAACAGTTTAGGCTTGATGT+TGG | 0.543608 | 1.2:-3699454 | MS.gene67151:intron |
GCCTCTGTTAAGATACCTGT+TGG | 0.543628 | 1.2:-3699835 | MS.gene67151:CDS |
CTTATTGCGAATAACCTTGA+CGG | 0.546836 | 1.2:+3701312 | None:intergenic |
CTTGGGTCATGATGAGGAGA+AGG | 0.551922 | 1.2:+3699373 | None:intergenic |
ACGGTGTTTACTGTTCTAGC+AGG | 0.560152 | 1.2:-3700928 | MS.gene67151:CDS |
TATCCATCATAAATAGGGGA+TGG | 0.565686 | 1.2:+3699409 | None:intergenic |
GTTAAGATACCTGTTGGTAA+GGG | 0.572861 | 1.2:-3699829 | MS.gene67151:CDS |
TCATTATAGATATTTGTTGG+AGG | 0.579075 | 1.2:-3699919 | MS.gene67151:intron |
CAAACTGTTCGTCTCTCTTG+GGG | 0.582336 | 1.2:-3699628 | MS.gene67151:CDS |
GGCGGTTACCCTATTTATGG+AGG | 0.585621 | 1.2:-3699331 | MS.gene67151:CDS |
AGTTGCAGCACCAATACGCA+TGG | 0.588428 | 1.2:+3700904 | None:intergenic |
TAAGCACAGCGGTATTTCAG+AGG | 0.593724 | 1.2:-3701293 | MS.gene67151:CDS |
TACATACTTGGGTCATGATG+AGG | 0.594093 | 1.2:+3699367 | None:intergenic |
AGGGGATGGAAAATATGGAC+CGG | 0.598421 | 1.2:+3699423 | None:intergenic |
TTTGCAGATTACCTCCGTCA+AGG | 0.598780 | 1.2:-3701326 | None:intergenic |
TCCATATCCATCATAAATAG+GGG | 0.599986 | 1.2:+3699405 | None:intergenic |
AAGCACAGCGGTATTTCAGA+GGG | 0.617802 | 1.2:-3701292 | MS.gene67151:CDS |
GTATTGGTGCTGCAACTCCA+AGG | 0.620390 | 1.2:-3700898 | MS.gene67151:CDS |
AAGCTAGAGGATACATACTT+GGG | 0.620813 | 1.2:+3699356 | None:intergenic |
GTTGCAGCACCAATACGCAT+GGG | 0.620904 | 1.2:+3700905 | None:intergenic |
AAATCATCTGGCCATCAACA+AGG | 0.629348 | 1.2:-3700875 | MS.gene67151:intron |
CGAATCCATAGCCCTTTGAA+CGG | 0.643491 | 1.2:+3700999 | None:intergenic |
CCTGTTTATATGCTGGATTG+CGG | 0.648162 | 1.2:+3699605 | None:intergenic |
TAGCACAGGAGACAAGGGAT+CGG | 0.659903 | 1.2:-3701155 | MS.gene67151:CDS |
GGGTAACCGCCATAAGCTAG+AGG | 0.661370 | 1.2:+3699343 | None:intergenic |
ACATTTAGCACAGGAGACAA+GGG | 0.668527 | 1.2:-3701160 | MS.gene67151:CDS |
CAGGCTATGACTCAAATGAA+CGG | 0.669010 | 1.2:-3700947 | MS.gene67151:CDS |
ATGTATCCTCTAGCTTATGG+CGG | 0.695492 | 1.2:-3699349 | MS.gene67151:CDS |
ACCAACAGGTATCTTAACAG+AGG | 0.696199 | 1.2:+3699834 | None:intergenic |
ATTGCGAATAACCTTGACGG+AGG | 0.706195 | 1.2:+3701315 | None:intergenic |
GTTATTCGCAATAAGCACAG+CGG | 0.787456 | 1.2:-3701304 | MS.gene67151:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTGATTAGCTATTTAAAAT+TGG | + | chr1.2:3700686-3700705 | None:intergenic | 15.0% |
!!! | GAAATTTTATTCTTTCATTT+GGG | - | chr1.2:3699809-3699828 | MS.gene67151:CDS | 15.0% |
!!! | TGAAATTTTATTCTTTCATT+TGG | - | chr1.2:3699808-3699827 | MS.gene67151:CDS | 15.0% |
!! | CTTAATAATGATAACAGTTT+AGG | - | chr1.2:3701163-3701182 | MS.gene67151:CDS | 20.0% |
!! | GATTCATTATAGATATTTGT+TGG | - | chr1.2:3700706-3700725 | MS.gene67151:intron | 20.0% |
! | AAGACATAAGAATATCATTC+AGG | + | chr1.2:3700008-3700027 | None:intergenic | 25.0% |
! | ATCCATATCCATCATAAATA+GGG | + | chr1.2:3701227-3701246 | None:intergenic | 25.0% |
! | CAAAAGCAAATAATGTGATT+TGG | + | chr1.2:3699783-3699802 | None:intergenic | 25.0% |
! | GAATCTGAATTCTATAACTT+TGG | + | chr1.2:3700445-3700464 | None:intergenic | 25.0% |
! | GGACTTCAAAAAAAATTATG+AGG | + | chr1.2:3701083-3701102 | None:intergenic | 25.0% |
! | TATAGTCTTCTGTTTAGATT+TGG | - | chr1.2:3699974-3699993 | MS.gene67151:intron | 25.0% |
! | TATCCATATCCATCATAAAT+AGG | + | chr1.2:3701228-3701247 | None:intergenic | 25.0% |
! | TCAATATGAGGTAATATAGA+TGG | + | chr1.2:3699883-3699902 | None:intergenic | 25.0% |
! | TTTATTCTTTCATTTGGGAA+AGG | - | chr1.2:3699814-3699833 | MS.gene67151:CDS | 25.0% |
! | TTTGTCAAAGACAAATTGAA+GGG | + | chr1.2:3700338-3700357 | None:intergenic | 25.0% |
!! | AAAGTTTTACAGAATTATGC+TGG | - | chr1.2:3699399-3699418 | MS.gene67151:CDS | 25.0% |
!! | TCATTATAGATATTTGTTGG+AGG | - | chr1.2:3700709-3700728 | MS.gene67151:intron | 25.0% |
!! | TTTTGTCAAAGACAAATTGA+AGG | + | chr1.2:3700339-3700358 | None:intergenic | 25.0% |
!!! | TTTTGTCTGTTTCCTTATTT+AGG | - | chr1.2:3700546-3700565 | MS.gene67151:intron | 25.0% |
AGTTACCTCATGAAAATTCT+TGG | - | chr1.2:3700269-3700288 | MS.gene67151:intron | 30.0% | |
CACAAATTCAATTTCATGAC+AGG | + | chr1.2:3701133-3701152 | None:intergenic | 30.0% | |
GGACAAAATCAAAATACAGA+TGG | + | chr1.2:3700424-3700443 | None:intergenic | 30.0% | |
TAAATAGGGGATGGAAAATA+TGG | + | chr1.2:3701213-3701232 | None:intergenic | 30.0% | |
TCCATATCCATCATAAATAG+GGG | + | chr1.2:3701226-3701245 | None:intergenic | 30.0% | |
TTCAGATTCAAATTGCGAAT+CGG | - | chr1.2:3700456-3700475 | MS.gene67151:intron | 30.0% | |
TTTCAGAAATAATGCTGAAG+AGG | - | chr1.2:3700942-3700961 | MS.gene67151:CDS | 30.0% | |
! | TGAATCCAAGAATTTTCATG+AGG | + | chr1.2:3700277-3700296 | None:intergenic | 30.0% |
!! | CTTCAGCATTATTTCTGAAA+AGG | + | chr1.2:3700942-3700961 | None:intergenic | 30.0% |
!!! | ACTGATCTGTCTATTTTTGT+AGG | - | chr1.2:3699504-3699523 | MS.gene67151:intron | 30.0% |
AAGCTAGAGGATACATACTT+GGG | + | chr1.2:3701275-3701294 | None:intergenic | 35.0% | |
ACTTGTACCTGTTTGCAAAT+TGG | + | chr1.2:3700837-3700856 | None:intergenic | 35.0% | |
AGGACAAAGTGCAAACAATT+TGG | + | chr1.2:3701113-3701132 | None:intergenic | 35.0% | |
AGGTAACTATTTGCCTAATC+TGG | + | chr1.2:3700257-3700276 | None:intergenic | 35.0% | |
ATTGAAGGGATCTAAATGCA+AGG | + | chr1.2:3700324-3700343 | None:intergenic | 35.0% | |
CAGCAGAACAAATCAATATG+AGG | + | chr1.2:3699895-3699914 | None:intergenic | 35.0% | |
CTTATTGCGAATAACCTTGA+CGG | + | chr1.2:3699319-3699338 | None:intergenic | 35.0% | |
GTTGTTTATGATGCCAATAC+TGG | - | chr1.2:3699606-3699625 | MS.gene67151:CDS | 35.0% | |
TAAATGTTGCCCAGTTCAAA+CGG | + | chr1.2:3699455-3699474 | None:intergenic | 35.0% | |
TAACAGTTTAGGCTTGATGT+TGG | - | chr1.2:3701174-3701193 | MS.gene67151:CDS | 35.0% | |
TAAGCTAGAGGATACATACT+TGG | + | chr1.2:3701276-3701295 | None:intergenic | 35.0% | |
TATCCATCATAAATAGGGGA+TGG | + | chr1.2:3701222-3701241 | None:intergenic | 35.0% | |
TATTTAGGAGGTCAGTCAAA+TGG | - | chr1.2:3700561-3700580 | MS.gene67151:intron | 35.0% | |
TGCAAACAATTTGGTACTCT+AGG | + | chr1.2:3701104-3701123 | None:intergenic | 35.0% | |
TGTTAAGATACCTGTTGGTA+AGG | - | chr1.2:3700798-3700817 | MS.gene67151:intron | 35.0% | |
TTGTAGAATCTGCTTCAGAT+TGG | + | chr1.2:3700596-3700615 | None:intergenic | 35.0% | |
TTTCCATCCCCTATTTATGA+TGG | - | chr1.2:3701216-3701235 | MS.gene67151:CDS | 35.0% | |
TTTGACTGACCTCCTAAATA+AGG | + | chr1.2:3700561-3700580 | None:intergenic | 35.0% | |
! | AGTATGTATCCTCTAGCTTA+TGG | - | chr1.2:3701276-3701295 | MS.gene67151:CDS | 35.0% |
! | GTCTGCTAGTTTCACTAAAT+AGG | - | chr1.2:3700125-3700144 | MS.gene67151:intron | 35.0% |
! | GTTAAGATACCTGTTGGTAA+GGG | - | chr1.2:3700799-3700818 | MS.gene67151:intron | 35.0% |
! | GTTTTGTCCAATTTGCAAAC+AGG | - | chr1.2:3700827-3700846 | MS.gene67151:intron | 35.0% |
! | TGTCTGTTTCCTTATTTAGG+AGG | - | chr1.2:3700549-3700568 | MS.gene67151:intron | 35.0% |
!! | ACTTTTGCAGCTTTAACAGA+AGG | + | chr1.2:3699588-3699607 | None:intergenic | 35.0% |
!! | ATATTGATTTGTTCTGCTGC+AGG | - | chr1.2:3699896-3699915 | MS.gene67151:CDS | 35.0% |
!! | TCCCCTATTTATGATGGATA+TGG | - | chr1.2:3701222-3701241 | MS.gene67151:CDS | 35.0% |
AAATCATCTGGCCATCAACA+AGG | - | chr1.2:3699753-3699772 | MS.gene67151:intron | 40.0% | |
AACATTTAGCACAGGAGACA+AGG | - | chr1.2:3699467-3699486 | MS.gene67151:intron | 40.0% | |
AAGCAGACATTCTCTCAGTA+TGG | - | chr1.2:3700763-3700782 | MS.gene67151:intron | 40.0% | |
AAGCTAAACGGGACAATGAT+TGG | - | chr1.2:3700973-3700992 | MS.gene67151:CDS | 40.0% | |
ACATTTAGCACAGGAGACAA+GGG | - | chr1.2:3699468-3699487 | MS.gene67151:intron | 40.0% | |
ACCAACAGGTATCTTAACAG+AGG | + | chr1.2:3700797-3700816 | None:intergenic | 40.0% | |
AGGTTGCTCAAATGTTATCG+TGG | + | chr1.2:3700922-3700941 | None:intergenic | 40.0% | |
ATCAAGCTTTCCGTTTGAAC+TGG | - | chr1.2:3699442-3699461 | MS.gene67151:CDS | 40.0% | |
ATCTAAATGCAAGGCACGTT+GGG | + | chr1.2:3700315-3700334 | None:intergenic | 40.0% | |
ATCTTTGGACGGAATGTTCA+AGG | + | chr1.2:3699852-3699871 | None:intergenic | 40.0% | |
CAGGCTATGACTCAAATGAA+CGG | - | chr1.2:3699681-3699700 | MS.gene67151:CDS | 40.0% | |
CCTGTTTATATGCTGGATTG+CGG | + | chr1.2:3701026-3701045 | None:intergenic | 40.0% | |
CGAATCGGAAAGTCTATTTC+TGG | - | chr1.2:3700471-3700490 | MS.gene67151:intron | 40.0% | |
CTGTAAAACTTTCTCAGCTG+TGG | + | chr1.2:3699391-3699410 | None:intergenic | 40.0% | |
GAGATTGCCTGTTTATATGC+TGG | + | chr1.2:3701033-3701052 | None:intergenic | 40.0% | |
GATTTGGCATACCTTGTTGA+TGG | + | chr1.2:3699767-3699786 | None:intergenic | 40.0% | |
GTTATTCGCAATAAGCACAG+CGG | - | chr1.2:3699324-3699343 | MS.gene67151:CDS | 40.0% | |
TACATACTTGGGTCATGATG+AGG | + | chr1.2:3701264-3701283 | None:intergenic | 40.0% | |
TATGGCGGTTACCCTATTTA+TGG | - | chr1.2:3701294-3701313 | MS.gene67151:CDS | 40.0% | |
TCAAGCTTTCCGTTTGAACT+GGG | - | chr1.2:3699443-3699462 | MS.gene67151:CDS | 40.0% | |
TTCAGAGGGTTATGGATTTG+TGG | - | chr1.2:3699350-3699369 | MS.gene67151:CDS | 40.0% | |
TTGCTCAAATGTTATCGTGG+TGG | + | chr1.2:3700919-3700938 | None:intergenic | 40.0% | |
! | ATGTATCCTCTAGCTTATGG+CGG | - | chr1.2:3701279-3701298 | MS.gene67151:CDS | 40.0% |
! | CAATTTGTTCCATTAGCGTC+TGG | - | chr1.2:3700215-3700234 | MS.gene67151:intron | 40.0% |
! | GATGCTTTTCGATCCAGATT+AGG | - | chr1.2:3700241-3700260 | MS.gene67151:intron | 40.0% |
!! | TAGATGGCTAGAAGCATCTT+TGG | + | chr1.2:3699867-3699886 | None:intergenic | 40.0% |
AACTGGGCAACATTTAGCAC+AGG | - | chr1.2:3699459-3699478 | MS.gene67151:intron | 45.0% | |
AAGCACAGCGGTATTTCAGA+GGG | - | chr1.2:3699336-3699355 | MS.gene67151:CDS | 45.0% | |
ACGGTGTTTACTGTTCTAGC+AGG | - | chr1.2:3699700-3699719 | MS.gene67151:intron | 45.0% | |
AGAATCTGCTTCAGATTGGC+TGG | + | chr1.2:3700592-3700611 | None:intergenic | 45.0% | |
AGATGAAAGCGAGAGATCTC+AGG | - | chr1.2:3699662-3699681 | MS.gene67151:CDS | 45.0% | |
AGCAAACTGTTCGTCTCTCT+TGG | - | chr1.2:3700998-3701017 | MS.gene67151:CDS | 45.0% | |
AGCGGTATTTCAGAGGGTTA+TGG | - | chr1.2:3699342-3699361 | MS.gene67151:CDS | 45.0% | |
AGGCTTTGCAGAAGCTAAAC+GGG | - | chr1.2:3700962-3700981 | MS.gene67151:CDS | 45.0% | |
AGGGGATGGAAAATATGGAC+CGG | + | chr1.2:3701208-3701227 | None:intergenic | 45.0% | |
ATTGCGAATAACCTTGACGG+AGG | + | chr1.2:3699316-3699335 | None:intergenic | 45.0% | |
CAAACTGTTCGTCTCTCTTG+GGG | - | chr1.2:3701000-3701019 | MS.gene67151:CDS | 45.0% | |
CCGCAATCCAGCATATAAAC+AGG | - | chr1.2:3701023-3701042 | MS.gene67151:CDS | 45.0% | |
CGAATCCATAGCCCTTTGAA+CGG | + | chr1.2:3699632-3699651 | None:intergenic | 45.0% | |
CGGAAAGCTTGATCAGCATT+TGG | + | chr1.2:3699435-3699454 | None:intergenic | 45.0% | |
GAGGCTTTGCAGAAGCTAAA+CGG | - | chr1.2:3700961-3700980 | MS.gene67151:CDS | 45.0% | |
GATCTAAATGCAAGGCACGT+TGG | + | chr1.2:3700316-3700335 | None:intergenic | 45.0% | |
GCAAACTGTTCGTCTCTCTT+GGG | - | chr1.2:3700999-3701018 | MS.gene67151:CDS | 45.0% | |
GCAACTCCAAGGAAATCATC+TGG | - | chr1.2:3699741-3699760 | MS.gene67151:intron | 45.0% | |
GCCTCTGTTAAGATACCTGT+TGG | - | chr1.2:3700793-3700812 | MS.gene67151:intron | 45.0% | |
GTGAGTGGCCTCCATAAATA+GGG | + | chr1.2:3701308-3701327 | None:intergenic | 45.0% | |
TAAGCACAGCGGTATTTCAG+AGG | - | chr1.2:3699335-3699354 | MS.gene67151:CDS | 45.0% | |
TAGGCTTGATGTTGGAAGCT+GGG | - | chr1.2:3701182-3701201 | MS.gene67151:CDS | 45.0% | |
TGATGGCCAGATGATTTCCT+TGG | + | chr1.2:3699750-3699769 | None:intergenic | 45.0% | |
TGTGAGTGGCCTCCATAAAT+AGG | + | chr1.2:3701309-3701328 | None:intergenic | 45.0% | |
TTAGGCTTGATGTTGGAAGC+TGG | - | chr1.2:3701181-3701200 | MS.gene67151:CDS | 45.0% | |
!! | TGGCTAGAAGCATCTTTGGA+CGG | + | chr1.2:3699863-3699882 | None:intergenic | 45.0% |
AAACCACAGCCCTTACCAAC+AGG | + | chr1.2:3700811-3700830 | None:intergenic | 50.0% | |
AGCATCATGCCAGACGCTAA+TGG | + | chr1.2:3700227-3700246 | None:intergenic | 50.0% | |
AGTTGCAGCACCAATACGCA+TGG | + | chr1.2:3699727-3699746 | None:intergenic | 50.0% | |
CAAAGGGCTATGGATTCGTC+AGG | - | chr1.2:3699634-3699653 | MS.gene67151:CDS | 50.0% | |
CTTGGGTCATGATGAGGAGA+AGG | + | chr1.2:3701258-3701277 | None:intergenic | 50.0% | |
GCCAATACTGGCCGTTCAAA+GGG | - | chr1.2:3699618-3699637 | MS.gene67151:CDS | 50.0% | |
GGCGGTTACCCTATTTATGG+AGG | - | chr1.2:3701297-3701316 | MS.gene67151:CDS | 50.0% | |
GGCTATGGATTCGTCAGGTT+CGG | - | chr1.2:3699639-3699658 | MS.gene67151:CDS | 50.0% | |
GTTGCAGCACCAATACGCAT+GGG | + | chr1.2:3699726-3699745 | None:intergenic | 50.0% | |
TAGCACAGGAGACAAGGGAT+CGG | - | chr1.2:3699473-3699492 | MS.gene67151:intron | 50.0% | |
TGCCAATACTGGCCGTTCAA+AGG | - | chr1.2:3699617-3699636 | MS.gene67151:CDS | 50.0% | |
! | ATACCTGTTGGTAAGGGCTG+TGG | - | chr1.2:3700805-3700824 | MS.gene67151:intron | 50.0% |
!! | GTATTGGTGCTGCAACTCCA+AGG | - | chr1.2:3699730-3699749 | MS.gene67151:intron | 50.0% |
ACTGGCCGTTCAAAGGGCTA+TGG | - | chr1.2:3699624-3699643 | MS.gene67151:CDS | 55.0% | |
CTTGATGTTGGAAGCTGGGC+CGG | - | chr1.2:3701186-3701205 | MS.gene67151:CDS | 55.0% | |
GCCCTTTGAACGGCCAGTAT+TGG | + | chr1.2:3699622-3699641 | None:intergenic | 55.0% | |
GGGTAACCGCCATAAGCTAG+AGG | + | chr1.2:3701288-3701307 | None:intergenic | 55.0% | |
TCTAGCAGGCCCATGCGTAT+TGG | - | chr1.2:3699714-3699733 | MS.gene67151:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 3699309 | 3701341 | 3699309 | ID=MS.gene67151 |
chr1.2 | mRNA | 3699309 | 3701341 | 3699309 | ID=MS.gene67151.t1;Parent=MS.gene67151 |
chr1.2 | exon | 3700876 | 3701341 | 3700876 | ID=MS.gene67151.t1.exon1;Parent=MS.gene67151.t1 |
chr1.2 | CDS | 3700876 | 3701341 | 3700876 | ID=cds.MS.gene67151.t1;Parent=MS.gene67151.t1 |
chr1.2 | exon | 3700027 | 3700082 | 3700027 | ID=MS.gene67151.t1.exon2;Parent=MS.gene67151.t1 |
chr1.2 | CDS | 3700027 | 3700082 | 3700027 | ID=cds.MS.gene67151.t1;Parent=MS.gene67151.t1 |
chr1.2 | exon | 3699802 | 3699932 | 3699802 | ID=MS.gene67151.t1.exon3;Parent=MS.gene67151.t1 |
chr1.2 | CDS | 3699802 | 3699932 | 3699802 | ID=cds.MS.gene67151.t1;Parent=MS.gene67151.t1 |
chr1.2 | exon | 3699606 | 3699702 | 3699606 | ID=MS.gene67151.t1.exon4;Parent=MS.gene67151.t1 |
chr1.2 | CDS | 3699606 | 3699702 | 3699606 | ID=cds.MS.gene67151.t1;Parent=MS.gene67151.t1 |
chr1.2 | exon | 3699309 | 3699470 | 3699309 | ID=MS.gene67151.t1.exon5;Parent=MS.gene67151.t1 |
chr1.2 | CDS | 3699309 | 3699470 | 3699309 | ID=cds.MS.gene67151.t1;Parent=MS.gene67151.t1 |
Gene Sequence |
Protein sequence |