Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24365.t1 | XP_013466018.1 | 98.3 | 351 | 6 | 0 | 74 | 424 | 75 | 425 | 4.90E-194 | 687.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24365.t1 | Q9SX79 | 69.9 | 339 | 93 | 6 | 92 | 424 | 97 | 432 | 5.2e-128 | 459.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24365.t1 | A0A072VF33 | 98.3 | 351 | 6 | 0 | 74 | 424 | 75 | 425 | 3.5e-194 | 687.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24365.t1 | MTR_1g020080 | 98.824 | 425 | 4 | 1 | 1 | 424 | 1 | 425 | 0.0 | 874 |
MS.gene24365.t1 | MTR_1g020080 | 97.020 | 302 | 8 | 1 | 1 | 301 | 1 | 302 | 0.0 | 609 |
MS.gene24365.t1 | MTR_1g020080 | 27.136 | 199 | 115 | 6 | 185 | 367 | 93 | 277 | 2.62e-13 | 70.9 |
MS.gene24365.t1 | MTR_3g101370 | 71.954 | 435 | 96 | 10 | 1 | 424 | 1 | 420 | 0.0 | 587 |
MS.gene24365.t1 | MTR_4g086600 | 66.225 | 302 | 82 | 3 | 94 | 375 | 114 | 415 | 1.94e-144 | 419 |
MS.gene24365.t1 | MTR_3g101370 | 69.836 | 305 | 72 | 6 | 1 | 296 | 1 | 294 | 1.29e-138 | 399 |
MS.gene24365.t1 | MTR_3g101370 | 28.125 | 192 | 113 | 7 | 179 | 361 | 86 | 261 | 4.51e-14 | 72.8 |
MS.gene24365.t1 | MTR_4g131970 | 59.104 | 335 | 115 | 6 | 94 | 413 | 72 | 399 | 7.14e-128 | 375 |
MS.gene24365.t1 | MTR_2g022950 | 55.710 | 359 | 146 | 4 | 70 | 419 | 34 | 388 | 2.65e-127 | 374 |
MS.gene24365.t1 | MTR_2g097960 | 51.297 | 347 | 137 | 4 | 88 | 405 | 7 | 350 | 7.32e-118 | 350 |
MS.gene24365.t1 | MTR_2g022950 | 56.838 | 234 | 96 | 3 | 70 | 298 | 34 | 267 | 6.53e-81 | 250 |
MS.gene24365.t1 | MTR_2g022950 | 26.316 | 190 | 117 | 6 | 190 | 368 | 61 | 238 | 6.12e-13 | 69.3 |
MS.gene24365.t1 | MTR_2g022950 | 59.903 | 207 | 81 | 1 | 72 | 276 | 36 | 242 | 3.14e-80 | 249 |
MS.gene24365.t1 | MTR_2g022950 | 26.316 | 190 | 117 | 6 | 190 | 368 | 61 | 238 | 1.41e-12 | 68.2 |
MS.gene24365.t1 | MTR_3g109090 | 30.822 | 292 | 173 | 6 | 96 | 367 | 44 | 326 | 6.57e-38 | 142 |
MS.gene24365.t1 | MTR_3g109090 | 25.532 | 188 | 114 | 4 | 182 | 363 | 37 | 204 | 1.97e-12 | 68.9 |
MS.gene24365.t1 | MTR_3g109090 | 30.822 | 292 | 173 | 6 | 96 | 367 | 60 | 342 | 1.00e-37 | 142 |
MS.gene24365.t1 | MTR_3g109090 | 25.532 | 188 | 114 | 4 | 182 | 363 | 53 | 220 | 2.33e-12 | 68.9 |
MS.gene24365.t1 | MTR_4g124940 | 30.928 | 291 | 173 | 9 | 96 | 367 | 46 | 327 | 1.03e-36 | 139 |
MS.gene24365.t1 | MTR_4g124940 | 27.513 | 189 | 111 | 4 | 182 | 364 | 39 | 207 | 1.41e-14 | 75.5 |
MS.gene24365.t1 | MTR_8g022050 | 30.612 | 294 | 171 | 10 | 96 | 367 | 62 | 344 | 1.61e-33 | 130 |
MS.gene24365.t1 | MTR_8g022050 | 26.943 | 193 | 115 | 4 | 182 | 368 | 55 | 227 | 2.80e-14 | 74.7 |
MS.gene24365.t1 | MTR_4g085540 | 29.720 | 286 | 184 | 7 | 98 | 374 | 124 | 401 | 6.29e-33 | 131 |
MS.gene24365.t1 | MTR_4g085540 | 29.658 | 263 | 161 | 9 | 97 | 354 | 35 | 278 | 4.80e-25 | 108 |
MS.gene24365.t1 | MTR_4g085540 | 32.222 | 180 | 100 | 4 | 185 | 359 | 30 | 192 | 1.86e-19 | 91.3 |
MS.gene24365.t1 | MTR_1g019150 | 28.283 | 297 | 203 | 6 | 84 | 374 | 108 | 400 | 4.75e-31 | 125 |
MS.gene24365.t1 | MTR_1g019150 | 27.757 | 263 | 166 | 7 | 97 | 354 | 33 | 276 | 2.17e-24 | 106 |
MS.gene24365.t1 | MTR_7g102730 | 27.368 | 285 | 173 | 8 | 97 | 371 | 11 | 271 | 4.19e-28 | 117 |
MS.gene24365.t1 | MTR_7g102730 | 29.057 | 265 | 173 | 7 | 98 | 354 | 100 | 357 | 3.14e-24 | 105 |
MS.gene24365.t1 | MTR_7g102730 | 26.291 | 213 | 114 | 6 | 187 | 376 | 8 | 200 | 1.90e-14 | 75.9 |
MS.gene24365.t1 | MTR_1g097440 | 31.655 | 278 | 161 | 11 | 95 | 365 | 29 | 284 | 4.53e-28 | 117 |
MS.gene24365.t1 | MTR_1g097440 | 23.675 | 283 | 206 | 6 | 98 | 374 | 120 | 398 | 4.17e-22 | 99.4 |
MS.gene24365.t1 | MTR_3g102040 | 26.241 | 282 | 199 | 5 | 98 | 374 | 114 | 391 | 2.23e-26 | 112 |
MS.gene24365.t1 | MTR_3g102040 | 31.154 | 260 | 155 | 8 | 97 | 351 | 25 | 265 | 2.84e-23 | 102 |
MS.gene24365.t1 | MTR_3g102040 | 32.044 | 181 | 101 | 4 | 184 | 359 | 19 | 182 | 9.51e-19 | 89.0 |
MS.gene24365.t1 | MTR_3g102040 | 23.923 | 209 | 145 | 4 | 73 | 270 | 180 | 385 | 1.46e-11 | 66.6 |
MS.gene24365.t1 | MTR_6g040190 | 28.409 | 264 | 161 | 6 | 94 | 352 | 23 | 263 | 4.80e-25 | 108 |
MS.gene24365.t1 | MTR_6g040190 | 24.382 | 283 | 200 | 7 | 98 | 374 | 115 | 389 | 3.36e-20 | 93.6 |
MS.gene24365.t1 | MTR_6g040190 | 29.050 | 179 | 105 | 4 | 190 | 363 | 26 | 187 | 6.83e-17 | 83.2 |
MS.gene24365.t1 | MTR_1g061870 | 25.887 | 282 | 181 | 8 | 97 | 371 | 16 | 276 | 2.28e-24 | 105 |
MS.gene24365.t1 | MTR_1g061870 | 26.165 | 279 | 157 | 9 | 98 | 353 | 105 | 357 | 3.72e-16 | 80.9 |
MS.gene24365.t1 | MTR_6g040070 | 25.442 | 283 | 200 | 6 | 98 | 374 | 17 | 294 | 1.97e-23 | 103 |
MS.gene24365.t1 | MTR_6g040070 | 32.738 | 168 | 93 | 5 | 190 | 352 | 16 | 168 | 1.06e-15 | 79.7 |
MS.gene24365.t1 | MTR_3g065190 | 28.934 | 197 | 128 | 4 | 81 | 277 | 16 | 200 | 5.29e-20 | 91.7 |
MS.gene24365.t1 | MTR_3g065190 | 24.607 | 191 | 115 | 5 | 188 | 371 | 24 | 192 | 1.37e-12 | 69.3 |
MS.gene24365.t1 | MTR_1g056520 | 27.941 | 204 | 135 | 4 | 87 | 281 | 99 | 299 | 1.80e-18 | 85.9 |
MS.gene24365.t1 | MTR_4g104470 | 29.167 | 192 | 110 | 5 | 94 | 271 | 120 | 299 | 5.58e-18 | 84.3 |
MS.gene24365.t1 | MTR_4g104470 | 27.225 | 191 | 122 | 3 | 188 | 372 | 121 | 300 | 4.69e-16 | 79.0 |
MS.gene24365.t1 | MTR_3g075500 | 30.000 | 190 | 116 | 5 | 94 | 273 | 107 | 289 | 4.17e-17 | 81.6 |
MS.gene24365.t1 | MTR_3g075500 | 25.946 | 185 | 123 | 3 | 188 | 366 | 108 | 284 | 2.54e-12 | 67.4 |
MS.gene24365.t1 | MTR_6g004810 | 25.837 | 209 | 139 | 4 | 64 | 272 | 23 | 215 | 4.05e-15 | 77.0 |
MS.gene24365.t1 | MTR_7g118120 | 20.984 | 305 | 212 | 6 | 73 | 371 | 81 | 362 | 5.10e-15 | 77.0 |
MS.gene24365.t1 | MTR_7g106440 | 24.752 | 202 | 137 | 4 | 82 | 271 | 95 | 293 | 5.33e-15 | 75.9 |
MS.gene24365.t1 | MTR_1g080150 | 36.782 | 87 | 54 | 1 | 188 | 274 | 131 | 216 | 6.88e-15 | 74.3 |
MS.gene24365.t1 | MTR_1g045510 | 29.379 | 177 | 116 | 4 | 98 | 271 | 115 | 285 | 1.34e-14 | 74.3 |
MS.gene24365.t1 | MTR_7g010360 | 23.774 | 265 | 168 | 6 | 112 | 368 | 366 | 604 | 2.89e-14 | 75.5 |
MS.gene24365.t1 | MTR_1g064230 | 28.866 | 194 | 118 | 3 | 95 | 269 | 83 | 275 | 3.89e-14 | 72.8 |
MS.gene24365.t1 | MTR_1g064230 | 26.126 | 222 | 129 | 4 | 175 | 372 | 70 | 280 | 5.55e-14 | 72.4 |
MS.gene24365.t1 | MTR_5g097580 | 29.885 | 174 | 107 | 5 | 191 | 354 | 8 | 176 | 2.07e-13 | 72.4 |
MS.gene24365.t1 | MTR_3g079200 | 40.260 | 77 | 45 | 1 | 290 | 365 | 224 | 300 | 2.17e-13 | 72.0 |
MS.gene24365.t1 | MTR_5g097580 | 29.885 | 174 | 107 | 5 | 191 | 354 | 8 | 176 | 2.64e-13 | 72.0 |
MS.gene24365.t1 | MTR_4g068120 | 27.805 | 205 | 118 | 6 | 190 | 392 | 28 | 204 | 4.66e-13 | 71.6 |
MS.gene24365.t1 | MTR_2g026180 | 30.682 | 176 | 105 | 6 | 191 | 354 | 6 | 176 | 9.09e-13 | 70.1 |
MS.gene24365.t1 | MTR_3g055990 | 29.050 | 179 | 111 | 6 | 187 | 354 | 3 | 176 | 1.70e-12 | 69.3 |
MS.gene24365.t1 | MTR_3g055990 | 29.050 | 179 | 111 | 6 | 187 | 354 | 3 | 176 | 1.73e-12 | 69.3 |
MS.gene24365.t1 | MTR_8g092550 | 27.778 | 180 | 118 | 6 | 190 | 362 | 203 | 377 | 2.27e-12 | 69.3 |
MS.gene24365.t1 | MTR_4g122650 | 25.431 | 232 | 144 | 7 | 183 | 403 | 82 | 295 | 2.60e-12 | 69.3 |
MS.gene24365.t1 | MTR_7g104800 | 24.042 | 287 | 172 | 9 | 89 | 365 | 99 | 349 | 3.14e-12 | 68.6 |
MS.gene24365.t1 | MTR_3g027140 | 26.257 | 179 | 116 | 5 | 191 | 361 | 62 | 232 | 2.07e-11 | 63.9 |
MS.gene24365.t1 | MTR_3g103420 | 26.257 | 179 | 118 | 4 | 191 | 358 | 12 | 187 | 2.25e-11 | 65.5 |
MS.gene24365.t1 | MTR_7g094660 | 25.389 | 193 | 127 | 5 | 176 | 359 | 628 | 812 | 5.06e-11 | 65.1 |
MS.gene24365.t1 | MTR_4g052940 | 22.776 | 281 | 169 | 7 | 75 | 347 | 103 | 343 | 6.06e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24365.t1 | AT1G47490 | 63.702 | 416 | 124 | 12 | 18 | 424 | 35 | 432 | 8.05e-179 | 506 |
MS.gene24365.t1 | AT1G47500 | 66.576 | 368 | 104 | 7 | 63 | 424 | 80 | 434 | 3.48e-168 | 479 |
MS.gene24365.t1 | AT3G19130 | 56.204 | 411 | 151 | 9 | 1 | 383 | 1 | 410 | 3.77e-144 | 418 |
MS.gene24365.t1 | AT1G49600 | 57.682 | 371 | 130 | 9 | 56 | 406 | 71 | 434 | 6.06e-138 | 402 |
MS.gene24365.t1 | AT1G49600 | 65.744 | 289 | 88 | 4 | 90 | 367 | 112 | 400 | 1.22e-133 | 392 |
MS.gene24365.t1 | AT1G49600 | 65.744 | 289 | 88 | 4 | 90 | 367 | 112 | 400 | 1.22e-133 | 392 |
MS.gene24365.t1 | AT1G11650 | 55.072 | 345 | 137 | 6 | 37 | 371 | 2 | 338 | 2.06e-120 | 356 |
MS.gene24365.t1 | AT4G27000 | 58.741 | 286 | 118 | 0 | 90 | 375 | 74 | 359 | 1.28e-116 | 347 |
MS.gene24365.t1 | AT5G54900 | 54.103 | 329 | 145 | 5 | 80 | 404 | 44 | 370 | 1.11e-112 | 336 |
MS.gene24365.t1 | AT5G19350 | 53.593 | 334 | 135 | 5 | 94 | 413 | 22 | 349 | 4.55e-112 | 335 |
MS.gene24365.t1 | AT1G47490 | 59.862 | 289 | 93 | 9 | 18 | 298 | 35 | 308 | 1.65e-111 | 330 |
MS.gene24365.t1 | AT1G47490 | 27.807 | 187 | 113 | 6 | 185 | 361 | 97 | 271 | 2.24e-15 | 77.0 |
MS.gene24365.t1 | AT5G19350 | 51.130 | 354 | 149 | 5 | 78 | 413 | 6 | 353 | 4.18e-111 | 333 |
MS.gene24365.t1 | AT1G11650 | 54.313 | 313 | 125 | 6 | 37 | 339 | 2 | 306 | 5.66e-106 | 316 |
MS.gene24365.t1 | AT1G11650 | 27.473 | 182 | 107 | 6 | 190 | 361 | 63 | 229 | 1.12e-11 | 65.9 |
MS.gene24365.t1 | AT1G47500 | 62.917 | 240 | 74 | 4 | 63 | 297 | 80 | 309 | 3.94e-99 | 299 |
MS.gene24365.t1 | AT1G47500 | 27.273 | 187 | 114 | 6 | 185 | 361 | 99 | 273 | 1.57e-13 | 71.6 |
MS.gene24365.t1 | AT1G54080 | 34.589 | 292 | 162 | 11 | 96 | 367 | 63 | 345 | 6.13e-40 | 148 |
MS.gene24365.t1 | AT1G54080 | 26.943 | 193 | 115 | 4 | 182 | 368 | 56 | 228 | 2.15e-16 | 81.3 |
MS.gene24365.t1 | AT1G54080 | 34.680 | 297 | 159 | 12 | 96 | 367 | 63 | 349 | 8.24e-39 | 145 |
MS.gene24365.t1 | AT1G54080 | 27.411 | 197 | 113 | 4 | 182 | 368 | 56 | 232 | 4.98e-16 | 80.1 |
MS.gene24365.t1 | AT3G14100 | 32.192 | 292 | 169 | 9 | 96 | 367 | 59 | 341 | 8.27e-38 | 142 |
MS.gene24365.t1 | AT3G14100 | 27.513 | 189 | 111 | 4 | 182 | 364 | 52 | 220 | 8.85e-17 | 82.4 |
MS.gene24365.t1 | AT1G17370 | 31.959 | 291 | 168 | 10 | 96 | 367 | 54 | 333 | 2.92e-36 | 137 |
MS.gene24365.t1 | AT1G17370 | 27.461 | 193 | 114 | 4 | 182 | 368 | 47 | 219 | 2.11e-15 | 78.2 |
MS.gene24365.t1 | AT1G17370 | 26.222 | 225 | 126 | 8 | 68 | 263 | 114 | 327 | 5.58e-12 | 67.4 |
MS.gene24365.t1 | AT1G17370 | 31.633 | 294 | 168 | 10 | 96 | 367 | 54 | 336 | 8.68e-36 | 136 |
MS.gene24365.t1 | AT1G17370 | 27.461 | 193 | 114 | 4 | 182 | 368 | 47 | 219 | 2.35e-15 | 77.8 |
MS.gene24365.t1 | AT2G23350 | 28.819 | 288 | 184 | 9 | 98 | 374 | 136 | 413 | 3.28e-30 | 123 |
MS.gene24365.t1 | AT2G23350 | 30.943 | 265 | 149 | 11 | 97 | 351 | 47 | 287 | 5.78e-24 | 105 |
MS.gene24365.t1 | AT1G71770 | 28.152 | 341 | 214 | 11 | 98 | 422 | 148 | 473 | 6.81e-30 | 122 |
MS.gene24365.t1 | AT1G71770 | 29.818 | 275 | 160 | 10 | 95 | 359 | 58 | 309 | 3.18e-28 | 117 |
MS.gene24365.t1 | AT1G71770 | 28.152 | 341 | 214 | 11 | 98 | 422 | 148 | 473 | 6.81e-30 | 122 |
MS.gene24365.t1 | AT1G71770 | 29.818 | 275 | 160 | 10 | 95 | 359 | 58 | 309 | 3.18e-28 | 117 |
MS.gene24365.t1 | AT4G34110 | 28.723 | 282 | 192 | 6 | 98 | 374 | 126 | 403 | 1.74e-29 | 121 |
MS.gene24365.t1 | AT4G34110 | 30.337 | 267 | 152 | 9 | 95 | 351 | 35 | 277 | 1.78e-27 | 115 |
MS.gene24365.t1 | AT4G34110 | 32.571 | 175 | 96 | 4 | 190 | 359 | 37 | 194 | 6.07e-19 | 89.7 |
MS.gene24365.t1 | AT4G34110 | 24.631 | 203 | 139 | 4 | 75 | 266 | 194 | 393 | 1.31e-13 | 73.2 |
MS.gene24365.t1 | AT1G49760 | 27.915 | 283 | 193 | 6 | 98 | 374 | 135 | 412 | 2.01e-27 | 115 |
MS.gene24365.t1 | AT1G49760 | 28.679 | 265 | 155 | 9 | 97 | 351 | 46 | 286 | 2.66e-23 | 103 |
MS.gene24365.t1 | AT1G49760 | 27.915 | 283 | 193 | 6 | 98 | 374 | 135 | 412 | 2.01e-27 | 115 |
MS.gene24365.t1 | AT1G49760 | 28.679 | 265 | 155 | 9 | 97 | 351 | 46 | 286 | 2.66e-23 | 103 |
MS.gene24365.t1 | AT1G34140 | 25.912 | 274 | 190 | 6 | 98 | 365 | 33 | 299 | 8.66e-27 | 111 |
MS.gene24365.t1 | AT1G22760 | 27.636 | 275 | 188 | 6 | 98 | 365 | 138 | 408 | 4.05e-26 | 111 |
MS.gene24365.t1 | AT1G22760 | 26.644 | 289 | 181 | 10 | 95 | 374 | 48 | 314 | 2.62e-23 | 103 |
MS.gene24365.t1 | AT2G36660 | 24.643 | 280 | 185 | 7 | 97 | 371 | 25 | 283 | 3.08e-24 | 105 |
MS.gene24365.t1 | AT2G36660 | 24.068 | 295 | 191 | 7 | 98 | 376 | 114 | 391 | 4.43e-17 | 84.0 |
MS.gene24365.t1 | AT3G16380 | 28.302 | 265 | 173 | 7 | 98 | 354 | 114 | 369 | 2.91e-23 | 102 |
MS.gene24365.t1 | AT3G16380 | 27.675 | 271 | 168 | 8 | 97 | 359 | 22 | 272 | 9.35e-21 | 95.1 |
MS.gene24365.t1 | AT3G16380 | 25.116 | 215 | 148 | 5 | 66 | 270 | 172 | 383 | 1.06e-14 | 76.3 |
MS.gene24365.t1 | AT2G18510 | 26.904 | 197 | 132 | 4 | 81 | 277 | 16 | 200 | 1.30e-18 | 87.4 |
MS.gene24365.t1 | AT3G13224 | 27.749 | 191 | 134 | 2 | 81 | 271 | 4 | 190 | 6.03e-18 | 85.1 |
MS.gene24365.t1 | AT3G13224 | 27.119 | 177 | 106 | 5 | 184 | 354 | 14 | 173 | 5.82e-13 | 70.1 |
MS.gene24365.t1 | AT2G37220 | 28.796 | 191 | 120 | 4 | 187 | 362 | 89 | 278 | 1.21e-17 | 83.2 |
MS.gene24365.t1 | AT2G37220 | 28.866 | 194 | 113 | 4 | 98 | 269 | 93 | 283 | 4.00e-15 | 75.9 |
MS.gene24365.t1 | AT3G13224 | 28.409 | 176 | 122 | 2 | 96 | 271 | 10 | 181 | 2.17e-17 | 83.6 |
MS.gene24365.t1 | AT3G13224 | 27.647 | 170 | 100 | 5 | 191 | 354 | 12 | 164 | 7.44e-13 | 69.7 |
MS.gene24365.t1 | AT3G52380 | 27.551 | 196 | 119 | 4 | 91 | 270 | 111 | 299 | 3.24e-17 | 82.8 |
MS.gene24365.t1 | AT3G52380 | 25.556 | 180 | 126 | 3 | 191 | 364 | 118 | 295 | 7.24e-11 | 63.5 |
MS.gene24365.t1 | AT3G04500 | 33.945 | 109 | 66 | 2 | 188 | 296 | 136 | 238 | 2.05e-15 | 75.9 |
MS.gene24365.t1 | AT4G00830 | 21.893 | 338 | 216 | 8 | 59 | 388 | 93 | 390 | 2.09e-15 | 78.6 |
MS.gene24365.t1 | AT4G00830 | 21.893 | 338 | 216 | 8 | 59 | 388 | 93 | 390 | 2.09e-15 | 78.6 |
MS.gene24365.t1 | AT4G00830 | 21.893 | 338 | 216 | 8 | 59 | 388 | 93 | 390 | 2.09e-15 | 78.6 |
MS.gene24365.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 191 | 405 | 8 | 236 | 3.23e-14 | 74.7 |
MS.gene24365.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 191 | 405 | 8 | 236 | 3.23e-14 | 74.7 |
MS.gene24365.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 191 | 405 | 8 | 236 | 3.23e-14 | 74.7 |
MS.gene24365.t1 | AT4G14300 | 32.022 | 178 | 106 | 6 | 191 | 358 | 8 | 180 | 4.56e-14 | 73.9 |
MS.gene24365.t1 | AT4G14300 | 31.013 | 158 | 91 | 4 | 98 | 241 | 8 | 161 | 8.11e-11 | 63.9 |
MS.gene24365.t1 | AT4G14300 | 32.022 | 178 | 106 | 6 | 191 | 358 | 8 | 180 | 4.56e-14 | 73.9 |
MS.gene24365.t1 | AT4G14300 | 31.013 | 158 | 91 | 4 | 98 | 241 | 8 | 161 | 8.11e-11 | 63.9 |
MS.gene24365.t1 | AT3G13224 | 27.586 | 174 | 122 | 2 | 81 | 254 | 4 | 173 | 6.01e-14 | 71.6 |
MS.gene24365.t1 | AT3G13224 | 27.072 | 181 | 110 | 5 | 191 | 364 | 21 | 186 | 2.29e-13 | 69.7 |
MS.gene24365.t1 | AT1G60000 | 28.571 | 182 | 116 | 4 | 95 | 270 | 84 | 257 | 6.66e-14 | 72.0 |
MS.gene24365.t1 | AT1G07360 | 39.506 | 81 | 48 | 1 | 286 | 365 | 220 | 300 | 8.68e-14 | 73.6 |
MS.gene24365.t1 | AT3G07810 | 31.250 | 176 | 104 | 6 | 191 | 354 | 8 | 178 | 1.19e-13 | 73.2 |
MS.gene24365.t1 | AT3G07810 | 29.762 | 168 | 104 | 6 | 94 | 250 | 4 | 168 | 9.43e-11 | 63.9 |
MS.gene24365.t1 | AT5G50250 | 29.032 | 186 | 112 | 5 | 94 | 269 | 111 | 286 | 1.23e-13 | 71.6 |
MS.gene24365.t1 | AT5G50250 | 25.424 | 177 | 115 | 3 | 191 | 361 | 115 | 280 | 7.76e-12 | 66.2 |
MS.gene24365.t1 | AT3G07810 | 31.250 | 176 | 104 | 6 | 191 | 354 | 8 | 178 | 1.25e-13 | 73.2 |
MS.gene24365.t1 | AT3G07810 | 29.762 | 168 | 104 | 6 | 94 | 250 | 4 | 168 | 8.72e-11 | 64.3 |
MS.gene24365.t1 | AT2G29580 | 38.272 | 81 | 49 | 1 | 286 | 365 | 220 | 300 | 3.55e-13 | 71.6 |
MS.gene24365.t1 | AT5G40490 | 25.434 | 173 | 123 | 2 | 98 | 270 | 44 | 210 | 8.24e-13 | 70.1 |
MS.gene24365.t1 | AT1G58470 | 28.804 | 184 | 92 | 8 | 191 | 347 | 8 | 179 | 9.99e-13 | 69.7 |
MS.gene24365.t1 | AT1G58470 | 28.804 | 184 | 92 | 8 | 191 | 347 | 8 | 179 | 9.99e-13 | 69.7 |
MS.gene24365.t1 | AT4G00830 | 21.365 | 337 | 211 | 8 | 59 | 388 | 93 | 382 | 1.93e-12 | 69.3 |
MS.gene24365.t1 | AT4G00830 | 21.365 | 337 | 211 | 8 | 59 | 388 | 93 | 382 | 1.93e-12 | 69.3 |
MS.gene24365.t1 | AT5G47620 | 27.799 | 259 | 135 | 13 | 191 | 405 | 8 | 258 | 2.89e-12 | 68.6 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.80e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.80e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.80e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.80e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.91e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.91e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.91e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.91e-12 | 67.8 |
MS.gene24365.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.91e-12 | 67.8 |
MS.gene24365.t1 | AT2G33410 | 32.692 | 156 | 91 | 4 | 98 | 241 | 8 | 161 | 4.93e-12 | 67.8 |
MS.gene24365.t1 | AT4G26650 | 27.778 | 198 | 102 | 8 | 184 | 354 | 6 | 189 | 6.55e-12 | 67.4 |
MS.gene24365.t1 | AT4G26650 | 26.768 | 198 | 117 | 7 | 98 | 271 | 14 | 207 | 7.58e-11 | 64.3 |
MS.gene24365.t1 | AT4G26650 | 27.778 | 198 | 102 | 8 | 184 | 354 | 9 | 192 | 6.78e-12 | 67.4 |
MS.gene24365.t1 | AT4G26650 | 26.768 | 198 | 117 | 7 | 98 | 271 | 17 | 210 | 6.51e-11 | 64.3 |
MS.gene24365.t1 | AT5G40490 | 27.097 | 155 | 107 | 2 | 116 | 270 | 45 | 193 | 1.38e-11 | 66.2 |
MS.gene24365.t1 | AT4G13850 | 35.556 | 90 | 57 | 1 | 182 | 271 | 28 | 116 | 1.40e-11 | 62.0 |
MS.gene24365.t1 | AT3G52150 | 25.843 | 178 | 120 | 5 | 191 | 361 | 78 | 250 | 6.17e-11 | 63.2 |
MS.gene24365.t1 | AT3G52150 | 25.843 | 178 | 120 | 5 | 191 | 361 | 78 | 250 | 6.17e-11 | 63.2 |
MS.gene24365.t1 | AT4G39260 | 39.024 | 82 | 49 | 1 | 192 | 273 | 9 | 89 | 7.26e-11 | 58.9 |
MS.gene24365.t1 | AT4G13850 | 35.165 | 91 | 58 | 1 | 182 | 272 | 28 | 117 | 8.07e-11 | 60.5 |
MS.gene24365.t1 | AT4G16280 | 22.273 | 220 | 144 | 6 | 178 | 384 | 109 | 314 | 8.41e-11 | 64.3 |
MS.gene24365.t1 | AT3G23830 | 37.363 | 91 | 56 | 1 | 182 | 272 | 28 | 117 | 8.46e-11 | 60.1 |
MS.gene24365.t1 | AT3G23830 | 37.363 | 91 | 56 | 1 | 182 | 272 | 28 | 117 | 8.46e-11 | 60.1 |
MS.gene24365.t1 | AT4G16280 | 22.273 | 220 | 144 | 6 | 178 | 384 | 109 | 314 | 9.47e-11 | 64.3 |
MS.gene24365.t1 | AT4G13850 | 35.165 | 91 | 58 | 1 | 182 | 272 | 28 | 117 | 9.76e-11 | 60.5 |
MS.gene24365.t1 | AT4G24770 | 25.424 | 177 | 115 | 3 | 191 | 361 | 152 | 317 | 9.77e-11 | 63.2 |
MS.gene24365.t1 | AT4G24770 | 25.424 | 177 | 115 | 3 | 191 | 361 | 152 | 317 | 9.77e-11 | 63.2 |
Find 119 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGGCAGTTACCCTATTTA+TGG | 0.195288 | 1.1:-3152651 | MS.gene24365:CDS |
TATCCATATCCATCATAAAT+AGG | 0.205271 | 1.1:+3152720 | None:intergenic |
ACTTGTACCTGTTTGCAAAT+TGG | 0.251629 | 1.1:+3153111 | None:intergenic |
TGTGAGTGGCCTCCATAAAT+AGG | 0.276662 | 1.1:+3152639 | None:intergenic |
TAAATAGGGGATGGAAAATA+TGG | 0.277141 | 1.1:+3152735 | None:intergenic |
ATCCATATCCATCATAAATA+GGG | 0.292778 | 1.1:+3152721 | None:intergenic |
TCCCCTATTTATGATGGATA+TGG | 0.317090 | 1.1:-3152723 | MS.gene24365:CDS |
ATCAAGCTTTCCGTTTGAAC+TGG | 0.327481 | 1.1:-3154499 | MS.gene24365:CDS |
AGCAAACTGTTCGTCTCTCT+TGG | 0.360690 | 1.1:-3152947 | MS.gene24365:CDS |
AGCGGTATTTCAGAGGGTTA+TGG | 0.369552 | 1.1:-3154599 | MS.gene24365:CDS |
AGTATGTATCCTCTAGCTTA+TGG | 0.371643 | 1.1:-3152669 | MS.gene24365:CDS |
GCAAACTGTTCGTCTCTCTT+GGG | 0.373848 | 1.1:-3152946 | MS.gene24365:CDS |
GTTGTTTATGATGCCAATAC+TGG | 0.378361 | 1.1:-3154335 | MS.gene24365:CDS |
CGGAAAGCTTGATCAGCATT+TGG | 0.391386 | 1.1:+3154509 | None:intergenic |
GATTCATTATAGATATTTGT+TGG | 0.410964 | 1.1:-3153239 | MS.gene24365:intron |
TTCAGAGGGTTATGGATTTG+TGG | 0.411843 | 1.1:-3154591 | MS.gene24365:CDS |
TTTCCATCCCCTATTTATGA+TGG | 0.416044 | 1.1:-3152729 | MS.gene24365:CDS |
TTAGGCTTGATGTTGGAAGC+TGG | 0.420421 | 1.1:-3152764 | MS.gene24365:CDS |
AAGCAGACATTCTCTCAGTA+TGG | 0.431532 | 1.1:-3153182 | MS.gene24365:CDS |
CCGCAATCCAGCATATAAAC+AGG | 0.437492 | 1.1:-3152922 | MS.gene24365:intron |
GGCTATGGATTCGTCAGGTT+CGG | 0.440915 | 1.1:-3154302 | MS.gene24365:CDS |
GCCCTTTGAACGGCCAGTAT+TGG | 0.441892 | 1.1:+3154322 | None:intergenic |
GAGATTGCCTGTTTATATGC+TGG | 0.442204 | 1.1:+3152915 | None:intergenic |
GCCAATACTGGCCGTTCAAA+GGG | 0.443933 | 1.1:-3154323 | MS.gene24365:CDS |
AAGCTAAACGGGACAATGAT+TGG | 0.446192 | 1.1:-3152972 | MS.gene24365:CDS |
CAAAGTCTTATTCTCTCCAT+TGG | 0.446326 | 1.1:+3156318 | None:intergenic |
AGGCTTTGCAGAAGCTAAAC+GGG | 0.447114 | 1.1:-3152983 | MS.gene24365:CDS |
TTGTTGTTTGTTCGTCGTCT+CGG | 0.447408 | 1.1:+3156552 | None:intergenic |
GAGGCTTTGCAGAAGCTAAA+CGG | 0.454111 | 1.1:-3152984 | MS.gene24365:CDS |
ATGGAGAGAATAAGACTTTG+TGG | 0.457513 | 1.1:-3156315 | MS.gene24365:CDS |
GGATTGGTGATTTGCATAGC+TGG | 0.459794 | 1.1:-3156294 | MS.gene24365:CDS |
CACTGTTGTGGTACCGCCAC+CGG | 0.462244 | 1.1:+3156511 | None:intergenic |
ACAACAACGACAACAACCAC+CGG | 0.466412 | 1.1:-3156536 | MS.gene24365:CDS |
AGAATCTGCTTCAGATTGGC+TGG | 0.467448 | 1.1:+3153356 | None:intergenic |
TCTAGCAGGCCCATGCGTAT+TGG | 0.469784 | 1.1:-3154227 | MS.gene24365:CDS |
AAACCACAGCCCTTACCAAC+AGG | 0.471104 | 1.1:+3153137 | None:intergenic |
TATTTAGGAGGTCAGTCAAA+TGG | 0.473194 | 1.1:-3153384 | MS.gene24365:intron |
GTGAGTGGCCTCCATAAATA+GGG | 0.473583 | 1.1:+3152640 | None:intergenic |
GCAACTCCAAGGAAATCATC+TGG | 0.473764 | 1.1:-3154200 | MS.gene24365:CDS |
CAAAGGGCTATGGATTCGTC+AGG | 0.476987 | 1.1:-3154307 | MS.gene24365:CDS |
TTTCAGAAATAATGCTGAAG+AGG | 0.476993 | 1.1:-3153003 | MS.gene24365:intron |
TGTGATTTGGCATACCTTGT+TGG | 0.477898 | 1.1:+3154174 | None:intergenic |
ACAACCACCGGCACCGGTGG+CGG | 0.480339 | 1.1:-3156524 | MS.gene24365:CDS |
TAGGCTTGATGTTGGAAGCT+GGG | 0.480961 | 1.1:-3152763 | MS.gene24365:CDS |
TGTTAAGATACCTGTTGGTA+AGG | 0.488145 | 1.1:-3153147 | MS.gene24365:CDS |
CTTGATGTTGGAAGCTGGGC+CGG | 0.489214 | 1.1:-3152759 | MS.gene24365:CDS |
TAAGCTAGAGGATACATACT+TGG | 0.497605 | 1.1:+3152672 | None:intergenic |
GGCATTACCATCGCCGCTGT+TGG | 0.497740 | 1.1:+3156472 | None:intergenic |
TGCCAATACTGGCCGTTCAA+AGG | 0.499946 | 1.1:-3154324 | MS.gene24365:CDS |
TGTGGTACCGCCACCGGTGC+CGG | 0.505054 | 1.1:+3156517 | None:intergenic |
TGGTGGCCAGATGATTTCCT+TGG | 0.505236 | 1.1:+3154194 | None:intergenic |
CAGAATCAGCATGGATCCAA+TGG | 0.506359 | 1.1:-3156334 | MS.gene24365:CDS |
ATCAGCTTACTTGTTGTGAG+TGG | 0.507595 | 1.1:+3152625 | None:intergenic |
ATACCTGTTGGTAAGGGCTG+TGG | 0.509634 | 1.1:-3153140 | MS.gene24365:CDS |
AGATGAAAGCGAGAGATCTC+AGG | 0.512411 | 1.1:-3154279 | MS.gene24365:CDS |
ACGACAACAACCACCGGCAC+CGG | 0.518451 | 1.1:-3156530 | MS.gene24365:CDS |
TTGTAGAATCTGCTTCAGAT+TGG | 0.518743 | 1.1:+3153352 | None:intergenic |
GCAGTATCCAACAGCGGCGA+TGG | 0.519510 | 1.1:-3156479 | MS.gene24365:CDS |
TGATGATGATGGTGGTGATA+AGG | 0.520745 | 1.1:+3156403 | None:intergenic |
AACATTTAGCACAGGAGACA+AGG | 0.521571 | 1.1:-3154474 | MS.gene24365:CDS |
TCAAGCTTTCCGTTTGAACT+GGG | 0.522222 | 1.1:-3154498 | MS.gene24365:CDS |
TGTTTGTTCGTCGTCTCGGA+CGG | 0.523021 | 1.1:+3156556 | None:intergenic |
TAAATGTTGCCCAGTTCAAA+CGG | 0.531857 | 1.1:+3154489 | None:intergenic |
CTGTAAAACTTTCTCAGCTG+TGG | 0.534907 | 1.1:+3154553 | None:intergenic |
ACTGGCCGTTCAAAGGGCTA+TGG | 0.536195 | 1.1:-3154317 | MS.gene24365:CDS |
AACTGGGCAACATTTAGCAC+AGG | 0.537123 | 1.1:-3154482 | MS.gene24365:CDS |
TGGTGGTGATAAGGCACATA+TGG | 0.540734 | 1.1:+3156412 | None:intergenic |
TAACAGTTTAGGCTTGATGT+TGG | 0.543608 | 1.1:-3152771 | MS.gene24365:intron |
GCCTCTGTTAAGATACCTGT+TGG | 0.543628 | 1.1:-3153152 | MS.gene24365:CDS |
CTTATTGCGAATAACCTTGA+CGG | 0.546836 | 1.1:+3154625 | None:intergenic |
TGATGATTCTGATGCTGATG+TGG | 0.547295 | 1.1:+3156355 | None:intergenic |
GAGAATAAGACTTTGTGGAT+TGG | 0.547399 | 1.1:-3156310 | MS.gene24365:CDS |
GATTTGGCATACCTTGTTGG+TGG | 0.550639 | 1.1:+3154177 | None:intergenic |
CTTGGGTCATGATGAGGAGA+AGG | 0.551922 | 1.1:+3152690 | None:intergenic |
ACAACAACCACCGGCACCGG+TGG | 0.554952 | 1.1:-3156527 | MS.gene24365:CDS |
ACGGTGTTTACTGTTCTAGC+AGG | 0.560152 | 1.1:-3154241 | MS.gene24365:CDS |
TATCCATCATAAATAGGGGA+TGG | 0.565686 | 1.1:+3152726 | None:intergenic |
GGCAGTTACCCTATTTATGG+AGG | 0.567964 | 1.1:-3152648 | MS.gene24365:CDS |
GGCGGCGGCGCGTAATGTTG+AGG | 0.570717 | 1.1:+3156433 | None:intergenic |
GTTAAGATACCTGTTGGTAA+GGG | 0.572861 | 1.1:-3153146 | MS.gene24365:CDS |
TGATGTGGCGGCACGTGCAA+CGG | 0.578285 | 1.1:+3156370 | None:intergenic |
TCATTATAGATATTTGTTGG+AGG | 0.579075 | 1.1:-3153236 | MS.gene24365:intron |
CAAACTGTTCGTCTCTCTTG+GGG | 0.582336 | 1.1:-3152945 | MS.gene24365:CDS |
GCCGCTGTTGGATACTGCAT+CGG | 0.584942 | 1.1:+3156484 | None:intergenic |
TGGTGATTTGCATAGCTGGA+TGG | 0.585911 | 1.1:-3156290 | MS.gene24365:CDS |
AGTTGCAGCACCAATACGCA+TGG | 0.588428 | 1.1:+3154217 | None:intergenic |
TAAGCACAGCGGTATTTCAG+AGG | 0.593724 | 1.1:-3154606 | MS.gene24365:CDS |
TACATACTTGGGTCATGATG+AGG | 0.594093 | 1.1:+3152684 | None:intergenic |
AGGGGATGGAAAATATGGAC+CGG | 0.598421 | 1.1:+3152740 | None:intergenic |
TTTGCAGATTACCTCCGTCA+AGG | 0.598780 | 1.1:-3154639 | MS.gene24365:intron |
TCCATATCCATCATAAATAG+GGG | 0.599986 | 1.1:+3152722 | None:intergenic |
TGTTGATGAATCTGAACCGT+TGG | 0.607321 | 1.1:+3156579 | None:intergenic |
TGATAAGGCACATATGGCGG+CGG | 0.611687 | 1.1:+3156418 | None:intergenic |
CAGAATCATCAGAATCAGCA+TGG | 0.613279 | 1.1:-3156343 | MS.gene24365:CDS |
AAGCACAGCGGTATTTCAGA+GGG | 0.617802 | 1.1:-3154605 | MS.gene24365:CDS |
AAATCATCTGGCCACCAACA+AGG | 0.618546 | 1.1:-3154188 | MS.gene24365:intron |
GTATTGGTGCTGCAACTCCA+AGG | 0.620390 | 1.1:-3154211 | MS.gene24365:CDS |
AAGCTAGAGGATACATACTT+GGG | 0.620813 | 1.1:+3152673 | None:intergenic |
GTTGCAGCACCAATACGCAT+GGG | 0.620904 | 1.1:+3154218 | None:intergenic |
ATTAAGATGCAACAAACCAA+CGG | 0.621224 | 1.1:-3156595 | None:intergenic |
GGCGGCGCGTAATGTTGAGG+TGG | 0.632098 | 1.1:+3156436 | None:intergenic |
GTTGTTGAAACTGATGATGA+TGG | 0.642738 | 1.1:+3156392 | None:intergenic |
CGAATCCATAGCCCTTTGAA+CGG | 0.643491 | 1.1:+3154312 | None:intergenic |
CCTGTTTATATGCTGGATTG+CGG | 0.648162 | 1.1:+3152922 | None:intergenic |
TGCATCGGAATCCACTGTTG+TGG | 0.651631 | 1.1:+3156499 | None:intergenic |
CGGTGGCGGTACCACAACAG+TGG | 0.654273 | 1.1:-3156510 | MS.gene24365:CDS |
TGATTCTGATGCTGATGTGG+CGG | 0.656281 | 1.1:+3156358 | None:intergenic |
GGGTAACTGCCATAAGCTAG+AGG | 0.658887 | 1.1:+3152660 | None:intergenic |
TAGCACAGGAGACAAGGGAT+CGG | 0.659903 | 1.1:-3154468 | MS.gene24365:CDS |
TGGTGATAAGGCACATATGG+CGG | 0.664606 | 1.1:+3156415 | None:intergenic |
ACATTTAGCACAGGAGACAA+GGG | 0.668527 | 1.1:-3154473 | MS.gene24365:CDS |
GGTACCGCCACCGGTGCCGG+TGG | 0.668876 | 1.1:+3156520 | None:intergenic |
CAGGCTATGACTCAAATGAA+CGG | 0.669010 | 1.1:-3154260 | MS.gene24365:CDS |
GTTGAAACTGATGATGATGG+TGG | 0.687109 | 1.1:+3156395 | None:intergenic |
TGAGGTGGCATCATGTGATG+TGG | 0.687592 | 1.1:+3156451 | None:intergenic |
ACCAACAGGTATCTTAACAG+AGG | 0.696199 | 1.1:+3153151 | None:intergenic |
ATTGCGAATAACCTTGACGG+AGG | 0.706195 | 1.1:+3154628 | None:intergenic |
TCCGATGCAGTATCCAACAG+CGG | 0.717111 | 1.1:-3156485 | MS.gene24365:CDS |
GTTATTCGCAATAAGCACAG+CGG | 0.787456 | 1.1:-3154617 | MS.gene24365:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATAATTTTTCAATCTATA+AGG | + | chr1.1:3153704-3153723 | None:intergenic | 10.0% |
!!! | ATTGATTAGCTATTTAAAAT+TGG | + | chr1.1:3155956-3155975 | None:intergenic | 15.0% |
!!! | GAAATTTTATTCTTTCATTT+GGG | - | chr1.1:3155083-3155102 | MS.gene24365:intron | 15.0% |
!!! | TGAAATTTTATTCTTTCATT+TGG | - | chr1.1:3155082-3155101 | MS.gene24365:intron | 15.0% |
!!! | TTTAGGATTAAATAAGTTTT+CGG | + | chr1.1:3153422-3153441 | None:intergenic | 15.0% |
!! | ATATGTTGTAGATTTATGTT+TGG | - | chr1.1:3153087-3153106 | MS.gene24365:intron | 20.0% |
!! | CTTAATAATGATAACAGTTT+AGG | - | chr1.1:3156433-3156452 | MS.gene24365:CDS | 20.0% |
!! | GATTCATTATAGATATTTGT+TGG | - | chr1.1:3155976-3155995 | MS.gene24365:intron | 20.0% |
!! | TAAATGAAGTTGAAAATACT+TGG | - | chr1.1:3154053-3154072 | MS.gene24365:intron | 20.0% |
!! | TATGTTAAACGAAAATTGAT+GGG | - | chr1.1:3154329-3154348 | MS.gene24365:CDS | 20.0% |
!! | TTTGATATAGAATCCTATTA+AGG | - | chr1.1:3154528-3154547 | MS.gene24365:CDS | 20.0% |
!!! | AAGTATAGTCTTTTGTAATT+TGG | - | chr1.1:3153341-3153360 | MS.gene24365:intron | 20.0% |
!!! | AAGTCTATATTTTACTTCTT+TGG | - | chr1.1:3154238-3154257 | MS.gene24365:CDS | 20.0% |
!!! | TAAAAACATGTACTTTTGTT+CGG | + | chr1.1:3153303-3153322 | None:intergenic | 20.0% |
!!! | TGTTTATTTTGAAACATGTT+TGG | - | chr1.1:3152991-3153010 | MS.gene24365:CDS | 20.0% |
!!! | TTTATTTTCAACTTCAAATG+TGG | + | chr1.1:3153878-3153897 | None:intergenic | 20.0% |
! | AAGACATTAGAATATCATTC+AGG | + | chr1.1:3155283-3155302 | None:intergenic | 25.0% |
! | AATCTTTGTGAATTGAAGAA+TGG | - | chr1.1:3153904-3153923 | MS.gene24365:intron | 25.0% |
! | ACATGTCAATACATAAAAGT+TGG | + | chr1.1:3154273-3154292 | None:intergenic | 25.0% |
! | ACTAGAAACAAAATATTTCC+GGG | + | chr1.1:3153262-3153281 | None:intergenic | 25.0% |
! | ATCACAATTTAATGCATGTT+TGG | + | chr1.1:3154034-3154053 | None:intergenic | 25.0% |
! | ATCCATATCCATCATAAATA+GGG | + | chr1.1:3156497-3156516 | None:intergenic | 25.0% |
! | CAAAAGCAAATAATGTGATT+TGG | + | chr1.1:3155057-3155076 | None:intergenic | 25.0% |
! | CACTAGAAACAAAATATTTC+CGG | + | chr1.1:3153263-3153282 | None:intergenic | 25.0% |
! | GAATCTGAATTCTATAACTT+TGG | + | chr1.1:3155715-3155734 | None:intergenic | 25.0% |
! | GGACTTCAAAAAAAATTATG+AGG | + | chr1.1:3156353-3156372 | None:intergenic | 25.0% |
! | GTAAAATATAGACTTCTAGT+AGG | + | chr1.1:3154233-3154252 | None:intergenic | 25.0% |
! | GTATGTTAAACGAAAATTGA+TGG | - | chr1.1:3154328-3154347 | MS.gene24365:CDS | 25.0% |
! | TATCCATATCCATCATAAAT+AGG | + | chr1.1:3156498-3156517 | None:intergenic | 25.0% |
! | TCAATATGAGGTAATATAGA+TGG | + | chr1.1:3155157-3155176 | None:intergenic | 25.0% |
! | TTCGTTTAACATACATCAAA+TGG | + | chr1.1:3154322-3154341 | None:intergenic | 25.0% |
! | TTGTTAAAAACTTGTCATTG+TGG | - | chr1.1:3153208-3153227 | MS.gene24365:CDS | 25.0% |
! | TTTATTCTTTCATTTGGGAA+AGG | - | chr1.1:3155088-3155107 | MS.gene24365:intron | 25.0% |
! | TTTGTCAAAGACAAATTGAA+GGG | + | chr1.1:3155614-3155633 | None:intergenic | 25.0% |
!! | AAAGTTTTACAGAATTATGC+TGG | - | chr1.1:3154673-3154692 | MS.gene24365:intron | 25.0% |
!! | AACACAAAACACATTCATTT+TGG | + | chr1.1:3154090-3154109 | None:intergenic | 25.0% |
!! | ATGGTTTGCAATAATAAATG+TGG | - | chr1.1:3153527-3153546 | MS.gene24365:intron | 25.0% |
!! | TCATTATAGATATTTGTTGG+AGG | - | chr1.1:3155979-3155998 | MS.gene24365:intron | 25.0% |
!! | TTGTCATTGTGGAAATTTTT+AGG | - | chr1.1:3153219-3153238 | MS.gene24365:CDS | 25.0% |
!! | TTTTGTCAAAGACAAATTGA+AGG | + | chr1.1:3155615-3155634 | None:intergenic | 25.0% |
!!! | AACTTTTATGTATTGACATG+TGG | - | chr1.1:3154272-3154291 | MS.gene24365:CDS | 25.0% |
!!! | CATGTTTTTAGTTCATAAAG+AGG | - | chr1.1:3153313-3153332 | MS.gene24365:intron | 25.0% |
!!! | GTTAAATATGATTTTAGTCC+CGG | - | chr1.1:3153241-3153260 | MS.gene24365:intron | 25.0% |
!!! | TTTTGTCTGTTTCCTTATTT+AGG | - | chr1.1:3155816-3155835 | MS.gene24365:intron | 25.0% |
AAGCACAAAATTAGTAGCAT+AGG | + | chr1.1:3153956-3153975 | None:intergenic | 30.0% | |
AGTTACCTCATGAAAATTCT+TGG | - | chr1.1:3155545-3155564 | MS.gene24365:intron | 30.0% | |
CACAAATTCAATTTCATGAC+AGG | + | chr1.1:3156403-3156422 | None:intergenic | 30.0% | |
CTTGAGTTTGTGATAAATGA+AGG | - | chr1.1:3154185-3154204 | MS.gene24365:intron | 30.0% | |
GAAGTATAACATTTGATTCC+AGG | + | chr1.1:3154128-3154147 | None:intergenic | 30.0% | |
GGACAAAATCAAAATACAGA+TGG | + | chr1.1:3155694-3155713 | None:intergenic | 30.0% | |
GTTTCTTTAATGTTATAGCC+TGG | - | chr1.1:3154107-3154126 | MS.gene24365:intron | 30.0% | |
TAAATAGGGGATGGAAAATA+TGG | + | chr1.1:3156483-3156502 | None:intergenic | 30.0% | |
TCCATATCCATCATAAATAG+GGG | + | chr1.1:3156496-3156515 | None:intergenic | 30.0% | |
TCCTTAGAATGAAATTTGGA+AGG | - | chr1.1:3153851-3153870 | MS.gene24365:intron | 30.0% | |
TCCTTCCAAATTTCATTCTA+AGG | + | chr1.1:3153855-3153874 | None:intergenic | 30.0% | |
TCCTTCCTTAGAATGAAATT+TGG | - | chr1.1:3153847-3153866 | MS.gene24365:intron | 30.0% | |
TTCAATCTATAAGGTCATCA+AGG | + | chr1.1:3153695-3153714 | None:intergenic | 30.0% | |
TTCAGATTCAAATTGCGAAT+CGG | - | chr1.1:3155726-3155745 | MS.gene24365:intron | 30.0% | |
TTTCAGAAATAATGCTGAAG+AGG | - | chr1.1:3156212-3156231 | MS.gene24365:intron | 30.0% | |
TTTGTTCGGAATTGAAAAGT+GGG | + | chr1.1:3153289-3153308 | None:intergenic | 30.0% | |
! | ATTGTGATTTAAAACCATGG+TGG | - | chr1.1:3153596-3153615 | MS.gene24365:intron | 30.0% |
! | GCAATTGTGATTTAAAACCA+TGG | - | chr1.1:3153593-3153612 | MS.gene24365:intron | 30.0% |
! | TATGCTACTAATTTTGTGCT+TGG | - | chr1.1:3153955-3153974 | MS.gene24365:intron | 30.0% |
! | TCCAAATTTCATTCTAAGGA+AGG | + | chr1.1:3153851-3153870 | None:intergenic | 30.0% |
! | TGAATCCAAGAATTTTCATG+AGG | + | chr1.1:3155553-3155572 | None:intergenic | 30.0% |
! | TTTTGTGCTTGGAAATCTAT+TGG | - | chr1.1:3153966-3153985 | MS.gene24365:intron | 30.0% |
! | TTTTGTTCGGAATTGAAAAG+TGG | + | chr1.1:3153290-3153309 | None:intergenic | 30.0% |
!! | CTTCAGCATTATTTCTGAAA+AGG | + | chr1.1:3156212-3156231 | None:intergenic | 30.0% |
!! | TAGTCTCTATACTCACTTTT+CGG | + | chr1.1:3153371-3153390 | None:intergenic | 30.0% |
!!! | ACTGATCTGTCTATTTTTGT+AGG | - | chr1.1:3154778-3154797 | MS.gene24365:intron | 30.0% |
!!! | CGGAAATATTTTGTTTCTAG+TGG | - | chr1.1:3153261-3153280 | MS.gene24365:intron | 30.0% |
!!! | TGTTTTGATATTGATGCACA+TGG | - | chr1.1:3153565-3153584 | MS.gene24365:intron | 30.0% |
AAACCATGGTGGTTCTTTAT+TGG | - | chr1.1:3153607-3153626 | MS.gene24365:intron | 35.0% | |
AAGCTAGAGGATACATACTT+GGG | + | chr1.1:3156545-3156564 | None:intergenic | 35.0% | |
ACATGTCGAGAATACTAGTT+AGG | + | chr1.1:3153814-3153833 | None:intergenic | 35.0% | |
ACGAAAATTGATGGGAACTT+TGG | - | chr1.1:3154337-3154356 | MS.gene24365:CDS | 35.0% | |
ACTTGTACCTGTTTGCAAAT+TGG | + | chr1.1:3156107-3156126 | None:intergenic | 35.0% | |
AGGTAACTATTTGCCTAATC+TGG | + | chr1.1:3155533-3155552 | None:intergenic | 35.0% | |
AGGTCAAAGTGCAAACAATT+TGG | + | chr1.1:3156383-3156402 | None:intergenic | 35.0% | |
ATGCATGTTTGGAAATCTGT+TGG | + | chr1.1:3154023-3154042 | None:intergenic | 35.0% | |
ATGGAGAGAATAAGACTTTG+TGG | - | chr1.1:3152900-3152919 | MS.gene24365:intron | 35.0% | |
ATTGAAGGGATCTAAATGCA+AGG | + | chr1.1:3155600-3155619 | None:intergenic | 35.0% | |
CAGCAGAACAAATCAATATG+AGG | + | chr1.1:3155169-3155188 | None:intergenic | 35.0% | |
CGAAAATTGATGGGAACTTT+GGG | - | chr1.1:3154338-3154357 | MS.gene24365:CDS | 35.0% | |
CTTATTGCGAATAACCTTGA+CGG | + | chr1.1:3154593-3154612 | None:intergenic | 35.0% | |
GAGAATAAGACTTTGTGGAT+TGG | - | chr1.1:3152905-3152924 | MS.gene24365:intron | 35.0% | |
GAGTTTGTGATAAATGAAGG+TGG | - | chr1.1:3154188-3154207 | MS.gene24365:intron | 35.0% | |
GTGACAGTCAAAACCTTAAT+AGG | + | chr1.1:3154544-3154563 | None:intergenic | 35.0% | |
GTTGTTTATGATGCCAATAC+TGG | - | chr1.1:3154880-3154899 | MS.gene24365:intron | 35.0% | |
TAAATGTTGCCCAGTTCAAA+CGG | + | chr1.1:3154729-3154748 | None:intergenic | 35.0% | |
TAACAGTTTAGGCTTGATGT+TGG | - | chr1.1:3156444-3156463 | MS.gene24365:CDS | 35.0% | |
TAAGCTAGAGGATACATACT+TGG | + | chr1.1:3156546-3156565 | None:intergenic | 35.0% | |
TATCCATCATAAATAGGGGA+TGG | + | chr1.1:3156492-3156511 | None:intergenic | 35.0% | |
TATGGCAGTTACCCTATTTA+TGG | - | chr1.1:3156564-3156583 | MS.gene24365:CDS | 35.0% | |
TATTTAGGAGGTCAGTCAAA+TGG | - | chr1.1:3155831-3155850 | MS.gene24365:intron | 35.0% | |
TGCAAACAATTTGGTACTCT+AGG | + | chr1.1:3156374-3156393 | None:intergenic | 35.0% | |
TGTTAAGATACCTGTTGGTA+AGG | - | chr1.1:3156068-3156087 | MS.gene24365:intron | 35.0% | |
TTGTAGAATCTGCTTCAGAT+TGG | + | chr1.1:3155866-3155885 | None:intergenic | 35.0% | |
TTTCCATCCCCTATTTATGA+TGG | - | chr1.1:3156486-3156505 | MS.gene24365:CDS | 35.0% | |
TTTGACTGACCTCCTAAATA+AGG | + | chr1.1:3155831-3155850 | None:intergenic | 35.0% | |
! | AGTATGTATCCTCTAGCTTA+TGG | - | chr1.1:3156546-3156565 | MS.gene24365:CDS | 35.0% |
! | GTCTGCTAGTTTCACTAAAT+AGG | - | chr1.1:3155401-3155420 | MS.gene24365:intron | 35.0% |
! | GTTAAGATACCTGTTGGTAA+GGG | - | chr1.1:3156069-3156088 | MS.gene24365:intron | 35.0% |
! | GTTGTTGAAACTGATGATGA+TGG | + | chr1.1:3152826-3152845 | None:intergenic | 35.0% |
! | GTTTTGTCCAATTTGCAAAC+AGG | - | chr1.1:3156097-3156116 | MS.gene24365:intron | 35.0% |
! | GTTTTTATGCTTGTGAAGTG+TGG | - | chr1.1:3153486-3153505 | MS.gene24365:intron | 35.0% |
! | TGTCTGTTTCCTTATTTAGG+AGG | - | chr1.1:3155819-3155838 | MS.gene24365:intron | 35.0% |
!! | ACTTTTGCAGCTTTAACAGA+AGG | + | chr1.1:3154862-3154881 | None:intergenic | 35.0% |
!! | ATATTGATTTGTTCTGCTGC+AGG | - | chr1.1:3155170-3155189 | MS.gene24365:intron | 35.0% |
!! | CAAAGTCTTATTCTCTCCAT+TGG | + | chr1.1:3152900-3152919 | None:intergenic | 35.0% |
!! | CAGAACTACTCTGAAACAAT+CGG | + | chr1.1:3154407-3154426 | None:intergenic | 35.0% |
!! | TCCCCTATTTATGATGGATA+TGG | - | chr1.1:3156492-3156511 | MS.gene24365:CDS | 35.0% |
AACATTTAGCACAGGAGACA+AGG | - | chr1.1:3154741-3154760 | MS.gene24365:intron | 40.0% | |
AAGCAGACATTCTCTCAGTA+TGG | - | chr1.1:3156033-3156052 | MS.gene24365:intron | 40.0% | |
AAGCTAAACGGGACAATGAT+TGG | - | chr1.1:3156243-3156262 | MS.gene24365:intron | 40.0% | |
ACATTTAGCACAGGAGACAA+GGG | - | chr1.1:3154742-3154761 | MS.gene24365:intron | 40.0% | |
ACCAACAGGTATCTTAACAG+AGG | + | chr1.1:3156067-3156086 | None:intergenic | 40.0% | |
AGGTTGCTCAAATGTTATCG+TGG | + | chr1.1:3156192-3156211 | None:intergenic | 40.0% | |
ATCAAGCTTTCCGTTTGAAC+TGG | - | chr1.1:3154716-3154735 | MS.gene24365:intron | 40.0% | |
ATCTAAATGCAAGGCACGTT+GGG | + | chr1.1:3155591-3155610 | None:intergenic | 40.0% | |
ATCTTTGGACGGAATGTTCA+AGG | + | chr1.1:3155126-3155145 | None:intergenic | 40.0% | |
ATTGACATGTGGCCTAATGA+TGG | - | chr1.1:3154283-3154302 | MS.gene24365:CDS | 40.0% | |
CAACCAATAAAGAACCACCA+TGG | + | chr1.1:3153613-3153632 | None:intergenic | 40.0% | |
CAGAATCATCAGAATCAGCA+TGG | - | chr1.1:3152872-3152891 | MS.gene24365:intron | 40.0% | |
CAGGCTATGACTCAAATGAA+CGG | - | chr1.1:3154955-3154974 | MS.gene24365:intron | 40.0% | |
CCTGTTTATATGCTGGATTG+CGG | + | chr1.1:3156296-3156315 | None:intergenic | 40.0% | |
CGAATCGGAAAGTCTATTTC+TGG | - | chr1.1:3155741-3155760 | MS.gene24365:intron | 40.0% | |
CTGTAAAACTTTCTCAGCTG+TGG | + | chr1.1:3154665-3154684 | None:intergenic | 40.0% | |
GAGATTGCCTGTTTATATGC+TGG | + | chr1.1:3156303-3156322 | None:intergenic | 40.0% | |
GTTATGACAGAAGATGTTGC+TGG | - | chr1.1:3154489-3154508 | MS.gene24365:CDS | 40.0% | |
GTTATTCGCAATAAGCACAG+CGG | - | chr1.1:3154598-3154617 | MS.gene24365:CDS | 40.0% | |
TACATACTTGGGTCATGATG+AGG | + | chr1.1:3156534-3156553 | None:intergenic | 40.0% | |
TCAAGCTTTCCGTTTGAACT+GGG | - | chr1.1:3154717-3154736 | MS.gene24365:intron | 40.0% | |
TGATGATTCTGATGCTGATG+TGG | + | chr1.1:3152863-3152882 | None:intergenic | 40.0% | |
TTCAGAGGGTTATGGATTTG+TGG | - | chr1.1:3154624-3154643 | MS.gene24365:CDS | 40.0% | |
TTGCTCAAATGTTATCGTGG+TGG | + | chr1.1:3156189-3156208 | None:intergenic | 40.0% | |
! | CAAACCATTTTCCAAACCCA+AGG | + | chr1.1:3153515-3153534 | None:intergenic | 40.0% |
! | CAATTTGTTCCATTAGCGTC+TGG | - | chr1.1:3155491-3155510 | MS.gene24365:intron | 40.0% |
! | GATGCTTTTCGATCCAGATT+AGG | - | chr1.1:3155517-3155536 | MS.gene24365:intron | 40.0% |
! | TGGGAACTTTGGGAATTATG+TGG | - | chr1.1:3154348-3154367 | MS.gene24365:CDS | 40.0% |
! | TGTGATTTGGCATACCTTGT+TGG | + | chr1.1:3155044-3155063 | None:intergenic | 40.0% |
! | TGTTGATGAATCTGAACCGT+TGG | + | chr1.1:3152639-3152658 | None:intergenic | 40.0% |
!! | GTTGAAACTGATGATGATGG+TGG | + | chr1.1:3152823-3152842 | None:intergenic | 40.0% |
!! | TAGATGGCTAGAAGCATCTT+TGG | + | chr1.1:3155141-3155160 | None:intergenic | 40.0% |
!! | TGATGATGATGGTGGTGATA+AGG | + | chr1.1:3152815-3152834 | None:intergenic | 40.0% |
!! | TTAGGTTGAGTGTACTAGCT+AGG | + | chr1.1:3153796-3153815 | None:intergenic | 40.0% |
!! | TTGTTGTTTGTTCGTCGTCT+CGG | + | chr1.1:3152666-3152685 | None:intergenic | 40.0% |
AAATCATCTGGCCACCAACA+AGG | - | chr1.1:3155027-3155046 | MS.gene24365:intron | 45.0% | |
AACTGGGCAACATTTAGCAC+AGG | - | chr1.1:3154733-3154752 | MS.gene24365:intron | 45.0% | |
AAGCACAGCGGTATTTCAGA+GGG | - | chr1.1:3154610-3154629 | MS.gene24365:CDS | 45.0% | |
ACAACAACGACAACAACCAC+CGG | - | chr1.1:3152679-3152698 | MS.gene24365:CDS | 45.0% | |
ACCACTTTGCCACCATCATT+AGG | + | chr1.1:3154298-3154317 | None:intergenic | 45.0% | |
ACGGTGTTTACTGTTCTAGC+AGG | - | chr1.1:3154974-3154993 | MS.gene24365:intron | 45.0% | |
AGAATCTGCTTCAGATTGGC+TGG | + | chr1.1:3155862-3155881 | None:intergenic | 45.0% | |
AGATGAAAGCGAGAGATCTC+AGG | - | chr1.1:3154936-3154955 | MS.gene24365:intron | 45.0% | |
AGCAAACTGTTCGTCTCTCT+TGG | - | chr1.1:3156268-3156287 | MS.gene24365:CDS | 45.0% | |
AGCGGTATTTCAGAGGGTTA+TGG | - | chr1.1:3154616-3154635 | MS.gene24365:CDS | 45.0% | |
AGGCTTTGCAGAAGCTAAAC+GGG | - | chr1.1:3156232-3156251 | MS.gene24365:intron | 45.0% | |
AGGGGATGGAAAATATGGAC+CGG | + | chr1.1:3156478-3156497 | None:intergenic | 45.0% | |
ATTGCGAATAACCTTGACGG+AGG | + | chr1.1:3154590-3154609 | None:intergenic | 45.0% | |
CAAACTGTTCGTCTCTCTTG+GGG | - | chr1.1:3156270-3156289 | MS.gene24365:CDS | 45.0% | |
CAGAATCAGCATGGATCCAA+TGG | - | chr1.1:3152881-3152900 | MS.gene24365:intron | 45.0% | |
CCGCAATCCAGCATATAAAC+AGG | - | chr1.1:3156293-3156312 | MS.gene24365:CDS | 45.0% | |
CGAATCCATAGCCCTTTGAA+CGG | + | chr1.1:3154906-3154925 | None:intergenic | 45.0% | |
CGGAAAGCTTGATCAGCATT+TGG | + | chr1.1:3154709-3154728 | None:intergenic | 45.0% | |
GACACCTTGGGTTTGGAAAA+TGG | - | chr1.1:3153508-3153527 | MS.gene24365:intron | 45.0% | |
GAGGCTTTGCAGAAGCTAAA+CGG | - | chr1.1:3156231-3156250 | MS.gene24365:intron | 45.0% | |
GATCTAAATGCAAGGCACGT+TGG | + | chr1.1:3155592-3155611 | None:intergenic | 45.0% | |
GATTTGGCATACCTTGTTGG+TGG | + | chr1.1:3155041-3155060 | None:intergenic | 45.0% | |
GCAAACTGTTCGTCTCTCTT+GGG | - | chr1.1:3156269-3156288 | MS.gene24365:CDS | 45.0% | |
GCAACTCCAAGGAAATCATC+TGG | - | chr1.1:3155015-3155034 | MS.gene24365:intron | 45.0% | |
GCCTCTGTTAAGATACCTGT+TGG | - | chr1.1:3156063-3156082 | MS.gene24365:intron | 45.0% | |
GGAGAGACACATCAAATCAG+AGG | - | chr1.1:3153987-3154006 | MS.gene24365:intron | 45.0% | |
GGCAGTTACCCTATTTATGG+AGG | - | chr1.1:3156567-3156586 | MS.gene24365:CDS | 45.0% | |
GTGAGTGGCCTCCATAAATA+GGG | + | chr1.1:3156578-3156597 | None:intergenic | 45.0% | |
TAAGCACAGCGGTATTTCAG+AGG | - | chr1.1:3154609-3154628 | MS.gene24365:CDS | 45.0% | |
TAGGCTTGATGTTGGAAGCT+GGG | - | chr1.1:3156452-3156471 | MS.gene24365:CDS | 45.0% | |
TGATTCTGATGCTGATGTGG+CGG | + | chr1.1:3152860-3152879 | None:intergenic | 45.0% | |
TGGTGATAAGGCACATATGG+CGG | + | chr1.1:3152803-3152822 | None:intergenic | 45.0% | |
TGTGAGTGGCCTCCATAAAT+AGG | + | chr1.1:3156579-3156598 | None:intergenic | 45.0% | |
TTAGGCTTGATGTTGGAAGC+TGG | - | chr1.1:3156451-3156470 | MS.gene24365:CDS | 45.0% | |
TTGTGAAGTGTGGACACCTT+GGG | - | chr1.1:3153496-3153515 | MS.gene24365:intron | 45.0% | |
TTTGCAGATTACCTCCGTCA+AGG | - | chr1.1:3154576-3154595 | MS.gene24365:CDS | 45.0% | |
! | CTGTTTTGCTTCTACTGGAG+AGG | - | chr1.1:3152967-3152986 | MS.gene24365:CDS | 45.0% |
! | GGATTGGTGATTTGCATAGC+TGG | - | chr1.1:3152921-3152940 | MS.gene24365:intron | 45.0% |
! | TGGTGATTTGCATAGCTGGA+TGG | - | chr1.1:3152925-3152944 | MS.gene24365:CDS | 45.0% |
! | TGGTGGTGATAAGGCACATA+TGG | + | chr1.1:3152806-3152825 | None:intergenic | 45.0% |
!! | CATCGCTGTTTTGCTTCTAC+TGG | - | chr1.1:3152962-3152981 | MS.gene24365:CDS | 45.0% |
!! | TGGCTAGAAGCATCTTTGGA+CGG | + | chr1.1:3155137-3155156 | None:intergenic | 45.0% |
!!! | ACAAAAAAATTATAAATTTT+AGG | + | chr1.1:3153439-3153458 | None:intergenic | 5.0% |
AAACCACAGCCCTTACCAAC+AGG | + | chr1.1:3156081-3156100 | None:intergenic | 50.0% | |
AAGTGTGGACACCTTGGGTT+TGG | - | chr1.1:3153501-3153520 | MS.gene24365:intron | 50.0% | |
AGCATCATGCCAGACGCTAA+TGG | + | chr1.1:3155503-3155522 | None:intergenic | 50.0% | |
AGTTGCAGCACCAATACGCA+TGG | + | chr1.1:3155001-3155020 | None:intergenic | 50.0% | |
CAAAGGGCTATGGATTCGTC+AGG | - | chr1.1:3154908-3154927 | MS.gene24365:intron | 50.0% | |
CTTGGGTCATGATGAGGAGA+AGG | + | chr1.1:3156528-3156547 | None:intergenic | 50.0% | |
CTTGTGAAGTGTGGACACCT+TGG | - | chr1.1:3153495-3153514 | MS.gene24365:intron | 50.0% | |
GACATGTGGCCTAATGATGG+TGG | - | chr1.1:3154286-3154305 | MS.gene24365:CDS | 50.0% | |
GCCAATACTGGCCGTTCAAA+GGG | - | chr1.1:3154892-3154911 | MS.gene24365:intron | 50.0% | |
GGCTATGGATTCGTCAGGTT+CGG | - | chr1.1:3154913-3154932 | MS.gene24365:intron | 50.0% | |
GGGTAACTGCCATAAGCTAG+AGG | + | chr1.1:3156558-3156577 | None:intergenic | 50.0% | |
GTTGCAGCACCAATACGCAT+GGG | + | chr1.1:3155000-3155019 | None:intergenic | 50.0% | |
TAGCACAGGAGACAAGGGAT+CGG | - | chr1.1:3154747-3154766 | MS.gene24365:intron | 50.0% | |
TCCGATGCAGTATCCAACAG+CGG | - | chr1.1:3152730-3152749 | MS.gene24365:CDS | 50.0% | |
TGAGGTGGCATCATGTGATG+TGG | + | chr1.1:3152767-3152786 | None:intergenic | 50.0% | |
TGATAAGGCACATATGGCGG+CGG | + | chr1.1:3152800-3152819 | None:intergenic | 50.0% | |
TGCATCGGAATCCACTGTTG+TGG | + | chr1.1:3152719-3152738 | None:intergenic | 50.0% | |
TGCCAATACTGGCCGTTCAA+AGG | - | chr1.1:3154891-3154910 | MS.gene24365:intron | 50.0% | |
TGGTGGCCAGATGATTTCCT+TGG | + | chr1.1:3155024-3155043 | None:intergenic | 50.0% | |
TGTTTGTTCGTCGTCTCGGA+CGG | + | chr1.1:3152662-3152681 | None:intergenic | 50.0% | |
! | ATACCTGTTGGTAAGGGCTG+TGG | - | chr1.1:3156075-3156094 | MS.gene24365:intron | 50.0% |
!! | GCCTAATGATGGTGGCAAAG+TGG | - | chr1.1:3154294-3154313 | MS.gene24365:CDS | 50.0% |
!! | GTATTGGTGCTGCAACTCCA+AGG | - | chr1.1:3155004-3155023 | MS.gene24365:intron | 50.0% |
ACTGGCCGTTCAAAGGGCTA+TGG | - | chr1.1:3154898-3154917 | MS.gene24365:intron | 55.0% | |
CTTGATGTTGGAAGCTGGGC+CGG | - | chr1.1:3156456-3156475 | MS.gene24365:CDS | 55.0% | |
GCCCTTTGAACGGCCAGTAT+TGG | + | chr1.1:3154896-3154915 | None:intergenic | 55.0% | |
GCCGCTGTTGGATACTGCAT+CGG | + | chr1.1:3152734-3152753 | None:intergenic | 55.0% | |
TCTAGCAGGCCCATGCGTAT+TGG | - | chr1.1:3154988-3155007 | MS.gene24365:intron | 55.0% | |
ACGACAACAACCACCGGCAC+CGG | - | chr1.1:3152685-3152704 | MS.gene24365:CDS | 60.0% | |
CACTGTTGTGGTACCGCCAC+CGG | + | chr1.1:3152707-3152726 | None:intergenic | 60.0% | |
GCAGTATCCAACAGCGGCGA+TGG | - | chr1.1:3152736-3152755 | MS.gene24365:CDS | 60.0% | |
GGCATTACCATCGCCGCTGT+TGG | + | chr1.1:3152746-3152765 | None:intergenic | 60.0% | |
TGATGTGGCGGCACGTGCAA+CGG | + | chr1.1:3152848-3152867 | None:intergenic | 60.0% | |
GGCGGCGCGTAATGTTGAGG+TGG | + | chr1.1:3152782-3152801 | None:intergenic | 65.0% | |
! | ACAACAACCACCGGCACCGG+TGG | - | chr1.1:3152688-3152707 | MS.gene24365:CDS | 65.0% |
! | CGGTGGCGGTACCACAACAG+TGG | - | chr1.1:3152705-3152724 | MS.gene24365:CDS | 65.0% |
GGCGGCGGCGCGTAATGTTG+AGG | + | chr1.1:3152785-3152804 | None:intergenic | 70.0% | |
TGTGGTACCGCCACCGGTGC+CGG | + | chr1.1:3152701-3152720 | None:intergenic | 70.0% | |
!! | ACAACCACCGGCACCGGTGG+CGG | - | chr1.1:3152691-3152710 | MS.gene24365:CDS | 70.0% |
!! | GGTACCGCCACCGGTGCCGG+TGG | + | chr1.1:3152698-3152717 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 3152626 | 3156611 | 3152626 | ID=MS.gene24365 |
chr1.1 | mRNA | 3152626 | 3156611 | 3152626 | ID=MS.gene24365.t1;Parent=MS.gene24365 |
chr1.1 | exon | 3156249 | 3156611 | 3156249 | ID=MS.gene24365.t1.exon1;Parent=MS.gene24365.t1 |
chr1.1 | CDS | 3156249 | 3156611 | 3156249 | ID=cds.MS.gene24365.t1;Parent=MS.gene24365.t1 |
chr1.1 | exon | 3154189 | 3154654 | 3154189 | ID=MS.gene24365.t1.exon2;Parent=MS.gene24365.t1 |
chr1.1 | CDS | 3154189 | 3154654 | 3154189 | ID=cds.MS.gene24365.t1;Parent=MS.gene24365.t1 |
chr1.1 | exon | 3153344 | 3153399 | 3153344 | ID=MS.gene24365.t1.exon3;Parent=MS.gene24365.t1 |
chr1.1 | CDS | 3153344 | 3153399 | 3153344 | ID=cds.MS.gene24365.t1;Parent=MS.gene24365.t1 |
chr1.1 | exon | 3153119 | 3153249 | 3153119 | ID=MS.gene24365.t1.exon4;Parent=MS.gene24365.t1 |
chr1.1 | CDS | 3153119 | 3153249 | 3153119 | ID=cds.MS.gene24365.t1;Parent=MS.gene24365.t1 |
chr1.1 | exon | 3152923 | 3153019 | 3152923 | ID=MS.gene24365.t1.exon5;Parent=MS.gene24365.t1 |
chr1.1 | CDS | 3152923 | 3153019 | 3152923 | ID=cds.MS.gene24365.t1;Parent=MS.gene24365.t1 |
chr1.1 | exon | 3152626 | 3152787 | 3152626 | ID=MS.gene24365.t1.exon6;Parent=MS.gene24365.t1 |
chr1.1 | CDS | 3152626 | 3152787 | 3152626 | ID=cds.MS.gene24365.t1;Parent=MS.gene24365.t1 |
Gene Sequence |
Protein sequence |