Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062762.t1 | XP_013466018.1 | 98.6 | 351 | 5 | 0 | 74 | 424 | 75 | 425 | 9.80E-195 | 689.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062762.t1 | Q9SX79 | 69.9 | 339 | 93 | 6 | 92 | 424 | 97 | 432 | 5.2e-128 | 459.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062762.t1 | A0A072VF33 | 98.6 | 351 | 5 | 0 | 74 | 424 | 75 | 425 | 7.1e-195 | 689.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062762.t1 | MTR_1g020080 | 99.059 | 425 | 3 | 1 | 1 | 424 | 1 | 425 | 0.0 | 876 |
MS.gene062762.t1 | MTR_1g020080 | 97.020 | 302 | 8 | 1 | 1 | 301 | 1 | 302 | 0.0 | 609 |
MS.gene062762.t1 | MTR_1g020080 | 26.396 | 197 | 119 | 5 | 185 | 367 | 93 | 277 | 2.95e-13 | 70.5 |
MS.gene062762.t1 | MTR_3g101370 | 71.954 | 435 | 96 | 10 | 1 | 424 | 1 | 420 | 0.0 | 587 |
MS.gene062762.t1 | MTR_4g086600 | 66.225 | 302 | 82 | 3 | 94 | 375 | 114 | 415 | 3.27e-144 | 419 |
MS.gene062762.t1 | MTR_3g101370 | 69.836 | 305 | 72 | 6 | 1 | 296 | 1 | 294 | 1.25e-138 | 399 |
MS.gene062762.t1 | MTR_3g101370 | 28.125 | 192 | 113 | 7 | 179 | 361 | 86 | 261 | 4.39e-14 | 72.8 |
MS.gene062762.t1 | MTR_4g131970 | 58.806 | 335 | 119 | 5 | 94 | 416 | 72 | 399 | 3.77e-127 | 374 |
MS.gene062762.t1 | MTR_2g022950 | 55.899 | 356 | 147 | 4 | 70 | 416 | 34 | 388 | 1.07e-126 | 372 |
MS.gene062762.t1 | MTR_2g097960 | 51.297 | 347 | 137 | 4 | 88 | 405 | 7 | 350 | 7.73e-118 | 350 |
MS.gene062762.t1 | MTR_2g022950 | 56.838 | 234 | 96 | 3 | 70 | 298 | 34 | 267 | 6.25e-81 | 250 |
MS.gene062762.t1 | MTR_2g022950 | 26.316 | 190 | 117 | 6 | 190 | 368 | 61 | 238 | 5.74e-13 | 69.3 |
MS.gene062762.t1 | MTR_2g022950 | 59.903 | 207 | 81 | 1 | 72 | 276 | 36 | 242 | 3.43e-80 | 249 |
MS.gene062762.t1 | MTR_2g022950 | 26.316 | 190 | 117 | 6 | 190 | 368 | 61 | 238 | 1.56e-12 | 68.2 |
MS.gene062762.t1 | MTR_3g109090 | 30.822 | 292 | 173 | 6 | 96 | 367 | 44 | 326 | 6.71e-38 | 142 |
MS.gene062762.t1 | MTR_3g109090 | 25.532 | 188 | 114 | 4 | 182 | 363 | 37 | 204 | 2.06e-12 | 68.9 |
MS.gene062762.t1 | MTR_3g109090 | 30.822 | 292 | 173 | 6 | 96 | 367 | 60 | 342 | 8.17e-38 | 142 |
MS.gene062762.t1 | MTR_3g109090 | 25.532 | 188 | 114 | 4 | 182 | 363 | 53 | 220 | 2.09e-12 | 68.9 |
MS.gene062762.t1 | MTR_4g124940 | 30.928 | 291 | 173 | 9 | 96 | 367 | 46 | 327 | 1.15e-36 | 139 |
MS.gene062762.t1 | MTR_4g124940 | 27.513 | 189 | 111 | 4 | 182 | 364 | 39 | 207 | 1.39e-14 | 75.5 |
MS.gene062762.t1 | MTR_8g022050 | 30.612 | 294 | 171 | 10 | 96 | 367 | 62 | 344 | 1.84e-33 | 130 |
MS.gene062762.t1 | MTR_8g022050 | 26.943 | 193 | 115 | 4 | 182 | 368 | 55 | 227 | 2.93e-14 | 74.7 |
MS.gene062762.t1 | MTR_4g085540 | 29.720 | 286 | 184 | 7 | 98 | 374 | 124 | 401 | 6.05e-33 | 131 |
MS.gene062762.t1 | MTR_4g085540 | 29.658 | 263 | 161 | 9 | 97 | 354 | 35 | 278 | 4.54e-25 | 108 |
MS.gene062762.t1 | MTR_4g085540 | 32.222 | 180 | 100 | 4 | 185 | 359 | 30 | 192 | 1.70e-19 | 91.3 |
MS.gene062762.t1 | MTR_1g019150 | 28.283 | 297 | 203 | 6 | 84 | 374 | 108 | 400 | 4.75e-31 | 125 |
MS.gene062762.t1 | MTR_1g019150 | 27.757 | 263 | 166 | 7 | 97 | 354 | 33 | 276 | 2.23e-24 | 106 |
MS.gene062762.t1 | MTR_7g102730 | 27.368 | 285 | 173 | 8 | 97 | 371 | 11 | 271 | 3.86e-28 | 117 |
MS.gene062762.t1 | MTR_7g102730 | 29.057 | 265 | 173 | 7 | 98 | 354 | 100 | 357 | 2.91e-24 | 105 |
MS.gene062762.t1 | MTR_7g102730 | 26.291 | 213 | 114 | 6 | 187 | 376 | 8 | 200 | 1.75e-14 | 75.9 |
MS.gene062762.t1 | MTR_1g097440 | 31.655 | 278 | 161 | 11 | 95 | 365 | 29 | 284 | 4.93e-28 | 117 |
MS.gene062762.t1 | MTR_1g097440 | 23.675 | 283 | 206 | 6 | 98 | 374 | 120 | 398 | 4.02e-22 | 99.4 |
MS.gene062762.t1 | MTR_3g102040 | 26.241 | 282 | 199 | 5 | 98 | 374 | 114 | 391 | 1.92e-26 | 112 |
MS.gene062762.t1 | MTR_3g102040 | 31.154 | 260 | 155 | 8 | 97 | 351 | 25 | 265 | 2.59e-23 | 102 |
MS.gene062762.t1 | MTR_3g102040 | 32.044 | 181 | 101 | 4 | 184 | 359 | 19 | 182 | 8.61e-19 | 89.0 |
MS.gene062762.t1 | MTR_3g102040 | 23.923 | 209 | 145 | 4 | 73 | 270 | 180 | 385 | 1.34e-11 | 67.0 |
MS.gene062762.t1 | MTR_6g040190 | 28.409 | 264 | 161 | 6 | 94 | 352 | 23 | 263 | 4.98e-25 | 108 |
MS.gene062762.t1 | MTR_6g040190 | 24.382 | 283 | 200 | 7 | 98 | 374 | 115 | 389 | 3.27e-20 | 93.6 |
MS.gene062762.t1 | MTR_6g040190 | 29.050 | 179 | 105 | 4 | 190 | 363 | 26 | 187 | 7.01e-17 | 83.2 |
MS.gene062762.t1 | MTR_1g061870 | 25.887 | 282 | 181 | 8 | 97 | 371 | 16 | 276 | 2.28e-24 | 105 |
MS.gene062762.t1 | MTR_1g061870 | 26.165 | 279 | 157 | 9 | 98 | 353 | 105 | 357 | 3.76e-16 | 80.9 |
MS.gene062762.t1 | MTR_6g040070 | 25.442 | 283 | 200 | 6 | 98 | 374 | 17 | 294 | 1.97e-23 | 103 |
MS.gene062762.t1 | MTR_6g040070 | 32.738 | 168 | 93 | 5 | 190 | 352 | 16 | 168 | 1.01e-15 | 79.7 |
MS.gene062762.t1 | MTR_3g065190 | 27.803 | 223 | 146 | 5 | 81 | 300 | 16 | 226 | 5.05e-20 | 91.7 |
MS.gene062762.t1 | MTR_3g065190 | 24.607 | 191 | 115 | 5 | 188 | 371 | 24 | 192 | 1.28e-12 | 69.3 |
MS.gene062762.t1 | MTR_1g056520 | 27.941 | 204 | 135 | 4 | 87 | 281 | 99 | 299 | 2.10e-18 | 85.9 |
MS.gene062762.t1 | MTR_4g104470 | 29.167 | 192 | 110 | 5 | 94 | 271 | 120 | 299 | 6.20e-18 | 84.3 |
MS.gene062762.t1 | MTR_4g104470 | 27.225 | 191 | 122 | 3 | 188 | 372 | 121 | 300 | 5.15e-16 | 78.6 |
MS.gene062762.t1 | MTR_3g075500 | 30.000 | 190 | 116 | 5 | 94 | 273 | 107 | 289 | 4.76e-17 | 81.6 |
MS.gene062762.t1 | MTR_3g075500 | 25.946 | 185 | 123 | 3 | 188 | 366 | 108 | 284 | 2.73e-12 | 67.4 |
MS.gene062762.t1 | MTR_6g004810 | 25.837 | 209 | 139 | 4 | 64 | 272 | 23 | 215 | 3.91e-15 | 77.0 |
MS.gene062762.t1 | MTR_7g118120 | 20.984 | 305 | 212 | 6 | 73 | 371 | 81 | 362 | 4.19e-15 | 77.4 |
MS.gene062762.t1 | MTR_7g106440 | 24.752 | 202 | 137 | 4 | 82 | 271 | 95 | 293 | 6.48e-15 | 75.5 |
MS.gene062762.t1 | MTR_1g080150 | 36.782 | 87 | 54 | 1 | 188 | 274 | 131 | 216 | 7.21e-15 | 74.3 |
MS.gene062762.t1 | MTR_1g045510 | 29.379 | 177 | 116 | 4 | 98 | 271 | 115 | 285 | 1.42e-14 | 74.3 |
MS.gene062762.t1 | MTR_7g010360 | 23.774 | 265 | 168 | 6 | 112 | 368 | 366 | 604 | 2.97e-14 | 75.5 |
MS.gene062762.t1 | MTR_1g064230 | 28.866 | 194 | 118 | 3 | 95 | 269 | 83 | 275 | 4.23e-14 | 72.8 |
MS.gene062762.t1 | MTR_1g064230 | 26.126 | 222 | 129 | 4 | 175 | 372 | 70 | 280 | 5.82e-14 | 72.4 |
MS.gene062762.t1 | MTR_5g097580 | 29.885 | 174 | 107 | 5 | 191 | 354 | 8 | 176 | 1.89e-13 | 72.4 |
MS.gene062762.t1 | MTR_3g079200 | 40.260 | 77 | 45 | 1 | 290 | 365 | 224 | 300 | 2.14e-13 | 72.0 |
MS.gene062762.t1 | MTR_5g097580 | 29.885 | 174 | 107 | 5 | 191 | 354 | 8 | 176 | 2.31e-13 | 72.0 |
MS.gene062762.t1 | MTR_4g068120 | 27.805 | 205 | 118 | 6 | 190 | 392 | 28 | 204 | 4.58e-13 | 71.6 |
MS.gene062762.t1 | MTR_2g026180 | 30.682 | 176 | 105 | 6 | 191 | 354 | 6 | 176 | 7.88e-13 | 70.5 |
MS.gene062762.t1 | MTR_2g026180 | 26.733 | 202 | 133 | 4 | 98 | 286 | 6 | 205 | 8.71e-11 | 63.9 |
MS.gene062762.t1 | MTR_3g055990 | 29.050 | 179 | 111 | 6 | 187 | 354 | 3 | 176 | 1.40e-12 | 69.7 |
MS.gene062762.t1 | MTR_3g055990 | 29.050 | 179 | 111 | 6 | 187 | 354 | 3 | 176 | 1.42e-12 | 69.7 |
MS.gene062762.t1 | MTR_8g092550 | 27.778 | 180 | 118 | 6 | 190 | 362 | 203 | 377 | 2.37e-12 | 68.9 |
MS.gene062762.t1 | MTR_4g122650 | 25.431 | 232 | 144 | 7 | 183 | 403 | 82 | 295 | 2.63e-12 | 69.3 |
MS.gene062762.t1 | MTR_7g104800 | 24.042 | 287 | 172 | 9 | 89 | 365 | 99 | 349 | 2.90e-12 | 68.6 |
MS.gene062762.t1 | MTR_3g027140 | 26.257 | 179 | 116 | 5 | 191 | 361 | 62 | 232 | 2.09e-11 | 63.9 |
MS.gene062762.t1 | MTR_3g103420 | 26.257 | 179 | 118 | 4 | 191 | 358 | 12 | 187 | 2.13e-11 | 65.5 |
MS.gene062762.t1 | MTR_7g094660 | 25.405 | 185 | 122 | 4 | 176 | 352 | 628 | 804 | 4.88e-11 | 65.5 |
MS.gene062762.t1 | MTR_4g052940 | 22.776 | 281 | 169 | 7 | 75 | 347 | 103 | 343 | 5.39e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062762.t1 | AT1G47490 | 63.702 | 416 | 124 | 12 | 18 | 424 | 35 | 432 | 1.69e-178 | 505 |
MS.gene062762.t1 | AT1G47500 | 66.667 | 369 | 102 | 8 | 63 | 424 | 80 | 434 | 8.32e-168 | 478 |
MS.gene062762.t1 | AT3G19130 | 56.204 | 411 | 151 | 9 | 1 | 383 | 1 | 410 | 3.28e-144 | 418 |
MS.gene062762.t1 | AT1G49600 | 57.682 | 371 | 130 | 9 | 56 | 406 | 71 | 434 | 1.14e-137 | 402 |
MS.gene062762.t1 | AT1G49600 | 65.744 | 289 | 88 | 4 | 90 | 367 | 112 | 400 | 2.08e-133 | 391 |
MS.gene062762.t1 | AT1G49600 | 65.744 | 289 | 88 | 4 | 90 | 367 | 112 | 400 | 2.08e-133 | 391 |
MS.gene062762.t1 | AT1G11650 | 55.072 | 345 | 137 | 6 | 37 | 371 | 2 | 338 | 2.12e-120 | 356 |
MS.gene062762.t1 | AT4G27000 | 58.741 | 286 | 118 | 0 | 90 | 375 | 74 | 359 | 1.49e-116 | 347 |
MS.gene062762.t1 | AT5G19350 | 53.892 | 334 | 134 | 5 | 94 | 413 | 22 | 349 | 5.73e-113 | 338 |
MS.gene062762.t1 | AT5G54900 | 54.103 | 329 | 145 | 5 | 80 | 404 | 44 | 370 | 1.50e-112 | 335 |
MS.gene062762.t1 | AT5G19350 | 51.412 | 354 | 148 | 5 | 78 | 413 | 6 | 353 | 5.75e-112 | 335 |
MS.gene062762.t1 | AT1G47490 | 59.862 | 289 | 93 | 9 | 18 | 298 | 35 | 308 | 1.92e-111 | 330 |
MS.gene062762.t1 | AT1G47490 | 27.807 | 187 | 113 | 6 | 185 | 361 | 97 | 271 | 2.40e-15 | 77.0 |
MS.gene062762.t1 | AT1G11650 | 54.313 | 313 | 125 | 6 | 37 | 339 | 2 | 306 | 4.70e-106 | 316 |
MS.gene062762.t1 | AT1G11650 | 27.473 | 182 | 107 | 6 | 190 | 361 | 63 | 229 | 9.80e-12 | 65.9 |
MS.gene062762.t1 | AT1G47500 | 62.917 | 240 | 74 | 4 | 63 | 297 | 80 | 309 | 5.40e-99 | 298 |
MS.gene062762.t1 | AT1G47500 | 27.273 | 187 | 114 | 6 | 185 | 361 | 99 | 273 | 1.69e-13 | 71.6 |
MS.gene062762.t1 | AT1G54080 | 34.589 | 292 | 162 | 11 | 96 | 367 | 63 | 345 | 6.13e-40 | 148 |
MS.gene062762.t1 | AT1G54080 | 26.943 | 193 | 115 | 4 | 182 | 368 | 56 | 228 | 2.12e-16 | 81.3 |
MS.gene062762.t1 | AT1G54080 | 34.680 | 297 | 159 | 12 | 96 | 367 | 63 | 349 | 8.33e-39 | 145 |
MS.gene062762.t1 | AT1G54080 | 27.411 | 197 | 113 | 4 | 182 | 368 | 56 | 232 | 5.03e-16 | 80.1 |
MS.gene062762.t1 | AT3G14100 | 32.192 | 292 | 169 | 9 | 96 | 367 | 59 | 341 | 8.35e-38 | 142 |
MS.gene062762.t1 | AT3G14100 | 27.513 | 189 | 111 | 4 | 182 | 364 | 52 | 220 | 8.53e-17 | 82.4 |
MS.gene062762.t1 | AT1G17370 | 31.959 | 291 | 168 | 10 | 96 | 367 | 54 | 333 | 2.83e-36 | 138 |
MS.gene062762.t1 | AT1G17370 | 27.461 | 193 | 114 | 4 | 182 | 368 | 47 | 219 | 2.06e-15 | 78.2 |
MS.gene062762.t1 | AT1G17370 | 26.222 | 225 | 126 | 8 | 68 | 263 | 114 | 327 | 5.53e-12 | 67.8 |
MS.gene062762.t1 | AT1G17370 | 31.633 | 294 | 168 | 10 | 96 | 367 | 54 | 336 | 9.41e-36 | 136 |
MS.gene062762.t1 | AT1G17370 | 27.461 | 193 | 114 | 4 | 182 | 368 | 47 | 219 | 2.41e-15 | 77.8 |
MS.gene062762.t1 | AT2G23350 | 28.819 | 288 | 184 | 9 | 98 | 374 | 136 | 413 | 3.16e-30 | 123 |
MS.gene062762.t1 | AT2G23350 | 30.943 | 265 | 149 | 11 | 97 | 351 | 47 | 287 | 5.73e-24 | 105 |
MS.gene062762.t1 | AT1G71770 | 28.152 | 341 | 214 | 11 | 98 | 422 | 148 | 473 | 9.10e-30 | 122 |
MS.gene062762.t1 | AT1G71770 | 29.818 | 275 | 160 | 10 | 95 | 359 | 58 | 309 | 3.09e-28 | 117 |
MS.gene062762.t1 | AT1G71770 | 28.152 | 341 | 214 | 11 | 98 | 422 | 148 | 473 | 9.10e-30 | 122 |
MS.gene062762.t1 | AT1G71770 | 29.818 | 275 | 160 | 10 | 95 | 359 | 58 | 309 | 3.09e-28 | 117 |
MS.gene062762.t1 | AT4G34110 | 28.723 | 282 | 192 | 6 | 98 | 374 | 126 | 403 | 1.69e-29 | 121 |
MS.gene062762.t1 | AT4G34110 | 30.337 | 267 | 152 | 9 | 95 | 351 | 35 | 277 | 1.87e-27 | 115 |
MS.gene062762.t1 | AT4G34110 | 32.571 | 175 | 96 | 4 | 190 | 359 | 37 | 194 | 6.29e-19 | 89.7 |
MS.gene062762.t1 | AT4G34110 | 24.631 | 203 | 139 | 4 | 75 | 266 | 194 | 393 | 1.24e-13 | 73.2 |
MS.gene062762.t1 | AT1G49760 | 27.915 | 283 | 193 | 6 | 98 | 374 | 135 | 412 | 1.70e-27 | 115 |
MS.gene062762.t1 | AT1G49760 | 28.679 | 265 | 155 | 9 | 97 | 351 | 46 | 286 | 2.43e-23 | 103 |
MS.gene062762.t1 | AT1G49760 | 27.915 | 283 | 193 | 6 | 98 | 374 | 135 | 412 | 1.70e-27 | 115 |
MS.gene062762.t1 | AT1G49760 | 28.679 | 265 | 155 | 9 | 97 | 351 | 46 | 286 | 2.43e-23 | 103 |
MS.gene062762.t1 | AT1G34140 | 25.912 | 274 | 190 | 6 | 98 | 365 | 33 | 299 | 8.92e-27 | 111 |
MS.gene062762.t1 | AT1G22760 | 27.636 | 275 | 188 | 6 | 98 | 365 | 138 | 408 | 3.97e-26 | 111 |
MS.gene062762.t1 | AT1G22760 | 26.644 | 289 | 181 | 10 | 95 | 374 | 48 | 314 | 2.52e-23 | 103 |
MS.gene062762.t1 | AT2G36660 | 24.643 | 280 | 185 | 7 | 97 | 371 | 25 | 283 | 3.38e-24 | 105 |
MS.gene062762.t1 | AT2G36660 | 24.068 | 295 | 191 | 7 | 98 | 376 | 114 | 391 | 4.51e-17 | 84.0 |
MS.gene062762.t1 | AT3G16380 | 28.302 | 265 | 173 | 7 | 98 | 354 | 114 | 369 | 3.17e-23 | 102 |
MS.gene062762.t1 | AT3G16380 | 27.675 | 271 | 168 | 8 | 97 | 359 | 22 | 272 | 9.27e-21 | 95.1 |
MS.gene062762.t1 | AT3G16380 | 25.116 | 215 | 148 | 5 | 66 | 270 | 172 | 383 | 1.18e-14 | 76.3 |
MS.gene062762.t1 | AT2G18510 | 26.904 | 197 | 132 | 4 | 81 | 277 | 16 | 200 | 1.28e-18 | 87.4 |
MS.gene062762.t1 | AT3G13224 | 27.749 | 191 | 134 | 2 | 81 | 271 | 4 | 190 | 6.81e-18 | 85.1 |
MS.gene062762.t1 | AT3G13224 | 27.119 | 177 | 106 | 5 | 184 | 354 | 14 | 173 | 6.56e-13 | 70.1 |
MS.gene062762.t1 | AT2G37220 | 28.796 | 191 | 120 | 4 | 187 | 362 | 89 | 278 | 1.26e-17 | 83.2 |
MS.gene062762.t1 | AT2G37220 | 28.866 | 194 | 113 | 4 | 98 | 269 | 93 | 283 | 4.47e-15 | 75.9 |
MS.gene062762.t1 | AT3G13224 | 28.409 | 176 | 122 | 2 | 96 | 271 | 10 | 181 | 2.04e-17 | 83.6 |
MS.gene062762.t1 | AT3G13224 | 27.647 | 170 | 100 | 5 | 191 | 354 | 12 | 164 | 7.51e-13 | 69.7 |
MS.gene062762.t1 | AT3G52380 | 27.551 | 196 | 119 | 4 | 91 | 270 | 111 | 299 | 3.90e-17 | 82.4 |
MS.gene062762.t1 | AT3G52380 | 25.556 | 180 | 126 | 3 | 191 | 364 | 118 | 295 | 8.53e-11 | 63.5 |
MS.gene062762.t1 | AT4G00830 | 21.893 | 338 | 216 | 8 | 59 | 388 | 93 | 390 | 2.00e-15 | 78.6 |
MS.gene062762.t1 | AT4G00830 | 21.893 | 338 | 216 | 8 | 59 | 388 | 93 | 390 | 2.00e-15 | 78.6 |
MS.gene062762.t1 | AT4G00830 | 21.893 | 338 | 216 | 8 | 59 | 388 | 93 | 390 | 2.00e-15 | 78.6 |
MS.gene062762.t1 | AT3G04500 | 33.945 | 109 | 66 | 2 | 188 | 296 | 136 | 238 | 2.05e-15 | 75.9 |
MS.gene062762.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 191 | 405 | 8 | 236 | 3.26e-14 | 74.7 |
MS.gene062762.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 191 | 405 | 8 | 236 | 3.26e-14 | 74.7 |
MS.gene062762.t1 | AT5G47620 | 27.801 | 241 | 136 | 11 | 191 | 405 | 8 | 236 | 3.26e-14 | 74.7 |
MS.gene062762.t1 | AT4G14300 | 32.022 | 178 | 106 | 6 | 191 | 358 | 8 | 180 | 4.43e-14 | 73.9 |
MS.gene062762.t1 | AT4G14300 | 31.013 | 158 | 91 | 4 | 98 | 241 | 8 | 161 | 8.26e-11 | 63.9 |
MS.gene062762.t1 | AT4G14300 | 32.022 | 178 | 106 | 6 | 191 | 358 | 8 | 180 | 4.43e-14 | 73.9 |
MS.gene062762.t1 | AT4G14300 | 31.013 | 158 | 91 | 4 | 98 | 241 | 8 | 161 | 8.26e-11 | 63.9 |
MS.gene062762.t1 | AT3G13224 | 27.586 | 174 | 122 | 2 | 81 | 254 | 4 | 173 | 6.55e-14 | 71.2 |
MS.gene062762.t1 | AT3G13224 | 27.072 | 181 | 110 | 5 | 191 | 364 | 21 | 186 | 2.52e-13 | 69.7 |
MS.gene062762.t1 | AT1G60000 | 28.571 | 182 | 116 | 4 | 95 | 270 | 84 | 257 | 7.11e-14 | 71.6 |
MS.gene062762.t1 | AT1G07360 | 39.506 | 81 | 48 | 1 | 286 | 365 | 220 | 300 | 8.60e-14 | 73.6 |
MS.gene062762.t1 | AT3G07810 | 31.250 | 176 | 104 | 6 | 191 | 354 | 8 | 178 | 9.88e-14 | 73.2 |
MS.gene062762.t1 | AT3G07810 | 29.762 | 168 | 104 | 6 | 94 | 250 | 4 | 168 | 8.41e-11 | 64.3 |
MS.gene062762.t1 | AT3G07810 | 31.250 | 176 | 104 | 6 | 191 | 354 | 8 | 178 | 1.03e-13 | 73.2 |
MS.gene062762.t1 | AT3G07810 | 29.762 | 168 | 104 | 6 | 94 | 250 | 4 | 168 | 6.99e-11 | 64.3 |
MS.gene062762.t1 | AT5G50250 | 29.032 | 186 | 112 | 5 | 94 | 269 | 111 | 286 | 1.37e-13 | 71.2 |
MS.gene062762.t1 | AT5G50250 | 25.424 | 177 | 115 | 3 | 191 | 361 | 115 | 280 | 8.28e-12 | 66.2 |
MS.gene062762.t1 | AT2G29580 | 38.272 | 81 | 49 | 1 | 286 | 365 | 220 | 300 | 3.61e-13 | 71.6 |
MS.gene062762.t1 | AT5G40490 | 25.434 | 173 | 123 | 2 | 98 | 270 | 44 | 210 | 7.94e-13 | 70.1 |
MS.gene062762.t1 | AT1G58470 | 28.571 | 182 | 95 | 7 | 191 | 347 | 8 | 179 | 1.05e-12 | 69.3 |
MS.gene062762.t1 | AT1G58470 | 28.571 | 182 | 95 | 7 | 191 | 347 | 8 | 179 | 1.05e-12 | 69.3 |
MS.gene062762.t1 | AT4G00830 | 21.365 | 337 | 211 | 8 | 59 | 388 | 93 | 382 | 1.68e-12 | 69.3 |
MS.gene062762.t1 | AT4G00830 | 21.365 | 337 | 211 | 8 | 59 | 388 | 93 | 382 | 1.68e-12 | 69.3 |
MS.gene062762.t1 | AT5G47620 | 27.799 | 259 | 135 | 13 | 191 | 405 | 8 | 258 | 2.62e-12 | 68.9 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.28e-12 | 68.2 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.28e-12 | 68.2 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.28e-12 | 68.2 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.28e-12 | 68.2 |
MS.gene062762.t1 | AT2G33410 | 32.692 | 156 | 91 | 4 | 98 | 241 | 8 | 161 | 4.80e-12 | 67.8 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.96e-12 | 67.8 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.96e-12 | 67.8 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.96e-12 | 67.8 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.96e-12 | 67.8 |
MS.gene062762.t1 | AT5G55550 | 27.513 | 189 | 96 | 6 | 191 | 354 | 8 | 180 | 4.96e-12 | 67.8 |
MS.gene062762.t1 | AT4G26650 | 27.778 | 198 | 102 | 8 | 184 | 354 | 9 | 192 | 6.26e-12 | 67.4 |
MS.gene062762.t1 | AT4G26650 | 26.768 | 198 | 117 | 7 | 98 | 271 | 17 | 210 | 6.28e-11 | 64.3 |
MS.gene062762.t1 | AT4G26650 | 27.778 | 198 | 102 | 8 | 184 | 354 | 6 | 189 | 7.10e-12 | 67.4 |
MS.gene062762.t1 | AT4G26650 | 26.768 | 198 | 117 | 7 | 98 | 271 | 14 | 207 | 8.36e-11 | 63.9 |
MS.gene062762.t1 | AT4G13850 | 35.556 | 90 | 57 | 1 | 182 | 271 | 28 | 116 | 1.42e-11 | 62.0 |
MS.gene062762.t1 | AT5G40490 | 27.097 | 155 | 107 | 2 | 116 | 270 | 45 | 193 | 1.47e-11 | 66.2 |
MS.gene062762.t1 | AT3G52150 | 25.843 | 178 | 120 | 5 | 191 | 361 | 78 | 250 | 6.71e-11 | 62.8 |
MS.gene062762.t1 | AT3G52150 | 25.843 | 178 | 120 | 5 | 191 | 361 | 78 | 250 | 6.71e-11 | 62.8 |
MS.gene062762.t1 | AT4G39260 | 39.024 | 82 | 49 | 1 | 192 | 273 | 9 | 89 | 7.55e-11 | 58.9 |
MS.gene062762.t1 | AT3G23830 | 37.363 | 91 | 56 | 1 | 182 | 272 | 28 | 117 | 7.76e-11 | 60.1 |
MS.gene062762.t1 | AT3G23830 | 37.363 | 91 | 56 | 1 | 182 | 272 | 28 | 117 | 7.76e-11 | 60.1 |
MS.gene062762.t1 | AT4G13850 | 35.165 | 91 | 58 | 1 | 182 | 272 | 28 | 117 | 7.77e-11 | 60.5 |
MS.gene062762.t1 | AT4G13850 | 35.165 | 91 | 58 | 1 | 182 | 272 | 28 | 117 | 9.39e-11 | 60.5 |
MS.gene062762.t1 | AT4G16280 | 22.273 | 220 | 144 | 6 | 178 | 384 | 109 | 314 | 9.52e-11 | 63.9 |
MS.gene062762.t1 | AT4G16280 | 22.273 | 220 | 144 | 6 | 178 | 384 | 109 | 314 | 9.64e-11 | 64.3 |
MS.gene062762.t1 | AT4G16280 | 22.273 | 220 | 144 | 6 | 178 | 384 | 34 | 239 | 9.91e-11 | 64.3 |
Find 120 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCCATATCCATCATAAAT+AGG | 0.205271 | 1.4:+3285596 | None:intergenic |
TATGGCGGTTACCCTATTTA+TGG | 0.216233 | 1.4:-3285527 | MS.gene062762:CDS |
ACTTGTACCTGTTTGCAAAT+TGG | 0.251629 | 1.4:+3285987 | None:intergenic |
TGTGAGTGGCCTCCATAAAT+AGG | 0.276662 | 1.4:+3285515 | None:intergenic |
TAAATAGGGGATGGAAAATA+TGG | 0.277141 | 1.4:+3285611 | None:intergenic |
ATCCATATCCATCATAAATA+GGG | 0.292778 | 1.4:+3285597 | None:intergenic |
TCCCCTATTTATGATGGATA+TGG | 0.317090 | 1.4:-3285599 | MS.gene062762:CDS |
ATCAAGCTTTCCGTTTGAAC+TGG | 0.327481 | 1.4:-3287374 | MS.gene062762:CDS |
AGCAAACTGTTCGTCTCTCT+TGG | 0.360690 | 1.4:-3285823 | MS.gene062762:CDS |
AGCGGTATTTCAGAGGGTTA+TGG | 0.369552 | 1.4:-3287474 | MS.gene062762:CDS |
GCAAACTGTTCGTCTCTCTT+GGG | 0.373848 | 1.4:-3285822 | MS.gene062762:CDS |
GTTGTTTATGATGCCAATAC+TGG | 0.378361 | 1.4:-3287210 | MS.gene062762:CDS |
AGTATGTATCCTCTAGCTTA+TGG | 0.383103 | 1.4:-3285545 | MS.gene062762:CDS |
CGGAAAGCTTGATCAGCATT+TGG | 0.391386 | 1.4:+3287384 | None:intergenic |
GATTCATTATAGATATTTGT+TGG | 0.410964 | 1.4:-3286115 | MS.gene062762:intron |
TTCAGAGGGTTATGGATTTG+TGG | 0.411843 | 1.4:-3287466 | MS.gene062762:CDS |
TTTCCATCCCCTATTTATGA+TGG | 0.416044 | 1.4:-3285605 | MS.gene062762:CDS |
TTAGGCTTGATGTTGGAAGC+TGG | 0.420421 | 1.4:-3285640 | MS.gene062762:CDS |
AAGCAGACATTCTCTCAGTA+TGG | 0.431532 | 1.4:-3286058 | MS.gene062762:CDS |
CCGCAATCCAGCATATAAAC+AGG | 0.437492 | 1.4:-3285798 | MS.gene062762:intron |
GGCTATGGATTCGTCAGGTT+CGG | 0.440915 | 1.4:-3287177 | MS.gene062762:CDS |
GCCCTTTGAACGGCCAGTAT+TGG | 0.441892 | 1.4:+3287197 | None:intergenic |
GAGATTGCCTGTTTATATGC+TGG | 0.442204 | 1.4:+3285791 | None:intergenic |
GCCAATACTGGCCGTTCAAA+GGG | 0.443933 | 1.4:-3287198 | MS.gene062762:CDS |
AAGCTAAACGGGACAATGAT+TGG | 0.446192 | 1.4:-3285848 | MS.gene062762:CDS |
CAAAGTCTTATTCTCTCCAT+TGG | 0.446326 | 1.4:+3289204 | None:intergenic |
AGGCTTTGCAGAAGCTAAAC+GGG | 0.447114 | 1.4:-3285859 | MS.gene062762:CDS |
TTGTTGTTTGTTCGTCGTCT+CGG | 0.447408 | 1.4:+3289438 | None:intergenic |
TGTGGTACCGCCACCGGTGC+CGG | 0.447959 | 1.4:+3289403 | None:intergenic |
GAGGCTTTGCAGAAGCTAAA+CGG | 0.454111 | 1.4:-3285860 | MS.gene062762:CDS |
ATGGAGAGAATAAGACTTTG+TGG | 0.457513 | 1.4:-3289201 | MS.gene062762:CDS |
GGATTGGTGATTTGCATAGC+TGG | 0.459794 | 1.4:-3289180 | MS.gene062762:CDS |
CACTGTTGTGGTACCGCCAC+CGG | 0.462244 | 1.4:+3289397 | None:intergenic |
GATTTGGCATACCTTGTTGA+TGG | 0.463014 | 1.4:+3287052 | None:intergenic |
AGAATCTGCTTCAGATTGGC+TGG | 0.467448 | 1.4:+3286232 | None:intergenic |
TCTAGCAGGCCCATGCGTAT+TGG | 0.469784 | 1.4:-3287102 | MS.gene062762:CDS |
AAACCACAGCCCTTGCCAAC+AGG | 0.472685 | 1.4:+3286013 | None:intergenic |
TATTTAGGAGGTCAGTCAAA+TGG | 0.473194 | 1.4:-3286260 | MS.gene062762:intron |
GTGAGTGGCCTCCATAAATA+GGG | 0.473583 | 1.4:+3285516 | None:intergenic |
GCAACTCCAAGGAAATCATC+TGG | 0.473764 | 1.4:-3287075 | MS.gene062762:CDS |
ATACCTGTTGGCAAGGGCTG+TGG | 0.476967 | 1.4:-3286016 | MS.gene062762:CDS |
CAAAGGGCTATGGATTCGTC+AGG | 0.476987 | 1.4:-3287182 | MS.gene062762:CDS |
ACAACCTCCGGCACCGGTGG+CGG | 0.480339 | 1.4:-3289410 | MS.gene062762:CDS |
TAGGCTTGATGTTGGAAGCT+GGG | 0.480961 | 1.4:-3285639 | MS.gene062762:CDS |
TGATGGCCAGATGATTTCCT+TGG | 0.482556 | 1.4:+3287069 | None:intergenic |
CTTGATGTTGGAAGCTGGGC+CGG | 0.489214 | 1.4:-3285635 | MS.gene062762:CDS |
TTTCAGAAATAATGCTGAAG+AGG | 0.489630 | 1.4:-3285879 | MS.gene062762:intron |
TAAGCTAGAGGATACATACT+TGG | 0.497605 | 1.4:+3285548 | None:intergenic |
GGCATTACCATCGCCGCTGT+TGG | 0.497740 | 1.4:+3289358 | None:intergenic |
TGCCAATACTGGCCGTTCAA+AGG | 0.499946 | 1.4:-3287199 | MS.gene062762:CDS |
CAGAATCAGCATGGATCCAA+TGG | 0.506359 | 1.4:-3289220 | MS.gene062762:CDS |
ATCAGCTTACTTGTTGTGAG+TGG | 0.507595 | 1.4:+3285501 | None:intergenic |
AGATGAAAGCGAGAGATCTC+AGG | 0.512411 | 1.4:-3287154 | MS.gene062762:CDS |
ACAACAACGACAACAACCTC+CGG | 0.516967 | 1.4:-3289422 | MS.gene062762:CDS |
TTGTAGAATCTGCTTCAGAT+TGG | 0.518743 | 1.4:+3286228 | None:intergenic |
GCAGTATCCAACAGCGGCGA+TGG | 0.519510 | 1.4:-3289365 | MS.gene062762:CDS |
AACATTTAGCACAGGAGACA+AGG | 0.521571 | 1.4:-3287349 | MS.gene062762:CDS |
TCAAGCTTTCCGTTTGAACT+GGG | 0.522222 | 1.4:-3287373 | MS.gene062762:CDS |
TGTTTGTTCGTCGTCTCGGA+CGG | 0.523021 | 1.4:+3289442 | None:intergenic |
TGATGGTGATGGTGGTGATA+AGG | 0.523041 | 1.4:+3289289 | None:intergenic |
TAAATGTTGCCCAGTTCAAA+CGG | 0.531857 | 1.4:+3287364 | None:intergenic |
GCCTCTGTTAAGATACCTGT+TGG | 0.533284 | 1.4:-3286028 | MS.gene062762:CDS |
CTGTAAAACTTTCTCAGCTG+TGG | 0.534907 | 1.4:+3287428 | None:intergenic |
TGGTGGTGATAAGGAACATA+TGG | 0.535481 | 1.4:+3289298 | None:intergenic |
ACTGGCCGTTCAAAGGGCTA+TGG | 0.536195 | 1.4:-3287192 | MS.gene062762:CDS |
AACTGGGCAACATTTAGCAC+AGG | 0.537123 | 1.4:-3287357 | MS.gene062762:CDS |
TAACAGTTTAGGCTTGATGT+TGG | 0.543608 | 1.4:-3285647 | MS.gene062762:intron |
ACGACAACAACCTCCGGCAC+CGG | 0.544399 | 1.4:-3289416 | MS.gene062762:CDS |
CTTATTGCGAATAACCTTGA+CGG | 0.546836 | 1.4:+3287500 | None:intergenic |
TGATGATTCTGATGCTGATG+TGG | 0.547295 | 1.4:+3289241 | None:intergenic |
GAGAATAAGACTTTGTGGAT+TGG | 0.547399 | 1.4:-3289196 | MS.gene062762:CDS |
CTTGGGTCATGATGAGGAGA+AGG | 0.551922 | 1.4:+3285566 | None:intergenic |
ACGGTGTTTACTGTTCTAGC+AGG | 0.560152 | 1.4:-3287116 | MS.gene062762:CDS |
TATCCATCATAAATAGGGGA+TGG | 0.565686 | 1.4:+3285602 | None:intergenic |
TGTTAAGATACCTGTTGGCA+AGG | 0.567727 | 1.4:-3286023 | MS.gene062762:CDS |
GGCGGCGGCGCGTAATGTTG+AGG | 0.570717 | 1.4:+3289319 | None:intergenic |
ACAACAACCTCCGGCACCGG+TGG | 0.577518 | 1.4:-3289413 | MS.gene062762:CDS |
TGATGTGGCGGCACGTGCAA+CGG | 0.578285 | 1.4:+3289256 | None:intergenic |
TCATTATAGATATTTGTTGG+AGG | 0.579075 | 1.4:-3286112 | MS.gene062762:intron |
CAAACTGTTCGTCTCTCTTG+GGG | 0.582336 | 1.4:-3285821 | MS.gene062762:CDS |
TGTAGATGAATCTGAACCGT+TGG | 0.583525 | 1.4:+3289465 | None:intergenic |
GCCGCTGTTGGATACTGCAT+CGG | 0.584942 | 1.4:+3289370 | None:intergenic |
GGCGGTTACCCTATTTATGG+AGG | 0.585621 | 1.4:-3285524 | MS.gene062762:CDS |
TGGTGATTTGCATAGCTGGA+TGG | 0.585911 | 1.4:-3289176 | MS.gene062762:CDS |
AGTTGCAGCACCAATACGCA+TGG | 0.588428 | 1.4:+3287092 | None:intergenic |
TAAGCACAGCGGTATTTCAG+AGG | 0.593724 | 1.4:-3287481 | MS.gene062762:CDS |
TACATACTTGGGTCATGATG+AGG | 0.594093 | 1.4:+3285560 | None:intergenic |
GTTAAGATACCTGTTGGCAA+GGG | 0.595681 | 1.4:-3286022 | MS.gene062762:CDS |
AGGGGATGGAAAATATGGAC+CGG | 0.598421 | 1.4:+3285616 | None:intergenic |
TGTGCAGATTACCTCCGTCA+AGG | 0.598780 | 1.4:-3287514 | MS.gene062762:intron |
TCCATATCCATCATAAATAG+GGG | 0.599986 | 1.4:+3285598 | None:intergenic |
CAGAATCATCAGAATCAGCA+TGG | 0.613279 | 1.4:-3289229 | MS.gene062762:CDS |
AAGCACAGCGGTATTTCAGA+GGG | 0.617802 | 1.4:-3287480 | MS.gene062762:CDS |
GTATTGGTGCTGCAACTCCA+AGG | 0.620390 | 1.4:-3287086 | MS.gene062762:CDS |
AAGCTAGAGGATACATACTT+GGG | 0.620813 | 1.4:+3285549 | None:intergenic |
GTTGCAGCACCAATACGCAT+GGG | 0.620904 | 1.4:+3287093 | None:intergenic |
GTTAAGATGCAACAAACCAA+CGG | 0.624875 | 1.4:-3289481 | None:intergenic |
AAATCATCTGGCCATCAACA+AGG | 0.629348 | 1.4:-3287063 | MS.gene062762:intron |
GGCGGCGCGTAATGTTGAGG+TGG | 0.632098 | 1.4:+3289322 | None:intergenic |
GCTGAAACTGATGGTGATGG+TGG | 0.634806 | 1.4:+3289281 | None:intergenic |
GGTACCGCCACCGGTGCCGG+AGG | 0.635594 | 1.4:+3289406 | None:intergenic |
CGAATCCATAGCCCTTTGAA+CGG | 0.643491 | 1.4:+3287187 | None:intergenic |
TGATAAGGAACATATGGCGG+CGG | 0.643784 | 1.4:+3289304 | None:intergenic |
CCTGTTTATATGCTGGATTG+CGG | 0.648162 | 1.4:+3285798 | None:intergenic |
TGCATCGGAATCCACTGTTG+TGG | 0.651631 | 1.4:+3289385 | None:intergenic |
CGGTGGCGGTACCACAACAG+TGG | 0.654273 | 1.4:-3289396 | MS.gene062762:CDS |
TGATTCTGATGCTGATGTGG+CGG | 0.656281 | 1.4:+3289244 | None:intergenic |
TAGCACAGGAGACAAGGGAT+CGG | 0.659903 | 1.4:-3287343 | MS.gene062762:CDS |
GGGTAACCGCCATAAGCTAG+AGG | 0.661370 | 1.4:+3285536 | None:intergenic |
ACATTTAGCACAGGAGACAA+GGG | 0.668527 | 1.4:-3287348 | MS.gene062762:CDS |
CAGGCTATGACTCAAATGAA+CGG | 0.669010 | 1.4:-3287135 | MS.gene062762:CDS |
GCAACGGTTGCTGAAACTGA+TGG | 0.672284 | 1.4:+3289272 | None:intergenic |
TGGTGATAAGGAACATATGG+CGG | 0.679076 | 1.4:+3289301 | None:intergenic |
TGAGGTGGCATCATGTGATG+TGG | 0.687592 | 1.4:+3289337 | None:intergenic |
GCCAACAGGTATCTTAACAG+AGG | 0.692116 | 1.4:+3286027 | None:intergenic |
GTTGCTGAAACTGATGGTGA+TGG | 0.692973 | 1.4:+3289278 | None:intergenic |
ATGTATCCTCTAGCTTATGG+CGG | 0.695492 | 1.4:-3285542 | MS.gene062762:CDS |
ATTGCGAATAACCTTGACGG+AGG | 0.706195 | 1.4:+3287503 | None:intergenic |
TCCGATGCAGTATCCAACAG+CGG | 0.717111 | 1.4:-3289371 | MS.gene062762:CDS |
GTTATTCGCAATAAGCACAG+CGG | 0.787456 | 1.4:-3287492 | MS.gene062762:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTGATATAGAATTCTATTA+AGG | - | chr1.4:3287416-3287435 | MS.gene062762:CDS | 15.0% |
!!! | ATTGATTAGCTATTTAAAAT+TGG | + | chr1.4:3288842-3288861 | None:intergenic | 15.0% |
!!! | ATTTTTCAATCTATACTATA+AGG | + | chr1.4:3286588-3286607 | None:intergenic | 15.0% |
!!! | GAAATTTTATTCTTTCATTT+GGG | - | chr1.4:3287970-3287989 | MS.gene062762:intron | 15.0% |
!!! | TGAAATTTTATTCTTTCATT+TGG | - | chr1.4:3287969-3287988 | MS.gene062762:intron | 15.0% |
!!! | TTTAGGATTAAATAAGTTTT+CGG | + | chr1.4:3286306-3286325 | None:intergenic | 15.0% |
!! | ATAAAGAAGTAGAAAATACT+TGG | - | chr1.4:3286941-3286960 | MS.gene062762:intron | 20.0% |
!! | ATATGTTGTAGATTTATGTT+TGG | - | chr1.4:3285963-3285982 | MS.gene062762:intron | 20.0% |
!! | CTTAATAATGATAACAGTTT+AGG | - | chr1.4:3289319-3289338 | MS.gene062762:CDS | 20.0% |
!! | GATTCATTATAGATATTTGT+TGG | - | chr1.4:3288862-3288881 | MS.gene062762:intron | 20.0% |
!! | TATGTTAAACGAAAATTGAT+GGG | - | chr1.4:3287217-3287236 | MS.gene062762:CDS | 20.0% |
!!! | AAGTATAGTCTTTTGTAATT+TGG | - | chr1.4:3286225-3286244 | MS.gene062762:CDS | 20.0% |
!!! | AAGTCTATATTTTACTTCTT+TGG | - | chr1.4:3287126-3287145 | MS.gene062762:CDS | 20.0% |
!!! | ATGTTTTTAGTTCATAAAGA+GGG | - | chr1.4:3286198-3286217 | MS.gene062762:intron | 20.0% |
!!! | TGTTTTTTTTCAAACATGTT+TGG | - | chr1.4:3285867-3285886 | MS.gene062762:CDS | 20.0% |
!!! | TTGTTAAAAACTTTTCATTG+TGG | - | chr1.4:3286084-3286103 | MS.gene062762:CDS | 20.0% |
!!! | TTTATTTTCAACTTCAAATG+TGG | + | chr1.4:3286767-3286786 | None:intergenic | 20.0% |
!!! | TTTTCATTGTGGAAATTTTT+AGG | - | chr1.4:3286095-3286114 | MS.gene062762:CDS | 20.0% |
! | AAGACATAAGAATATCATTC+AGG | + | chr1.4:3288170-3288189 | None:intergenic | 25.0% |
! | AATCTTTGTGAATTGAAGAA+TGG | - | chr1.4:3286793-3286812 | MS.gene062762:intron | 25.0% |
! | ACATGTCAATACATAAAAGT+TGG | + | chr1.4:3287161-3287180 | None:intergenic | 25.0% |
! | ATCACAATTTAATGCATGTT+TGG | + | chr1.4:3286923-3286942 | None:intergenic | 25.0% |
! | ATCCATATCCATCATAAATA+GGG | + | chr1.4:3289383-3289402 | None:intergenic | 25.0% |
! | CAAAAGCAAATAATGTGATT+TGG | + | chr1.4:3287944-3287963 | None:intergenic | 25.0% |
! | GAATCTGAATTCTATAACTT+TGG | + | chr1.4:3288601-3288620 | None:intergenic | 25.0% |
! | GGACTTCAAAAAAAATTATG+AGG | + | chr1.4:3289239-3289258 | None:intergenic | 25.0% |
! | GTAAAATATAGACTTCTAGT+AGG | + | chr1.4:3287121-3287140 | None:intergenic | 25.0% |
! | GTATGTTAAACGAAAATTGA+TGG | - | chr1.4:3287216-3287235 | MS.gene062762:CDS | 25.0% |
! | TATCCATATCCATCATAAAT+AGG | + | chr1.4:3289384-3289403 | None:intergenic | 25.0% |
! | TCAATATGAGGTAATATAGA+TGG | + | chr1.4:3288044-3288063 | None:intergenic | 25.0% |
! | TTCGTTTAACATACATCAAA+TGG | + | chr1.4:3287210-3287229 | None:intergenic | 25.0% |
! | TTTATTCTTTCATTTGGGAA+AGG | - | chr1.4:3287975-3287994 | MS.gene062762:intron | 25.0% |
! | TTTGTCAAAGACAAATTGAA+GGG | + | chr1.4:3288501-3288520 | None:intergenic | 25.0% |
!! | AAAGTTTTACAGAATTATGC+TGG | - | chr1.4:3287560-3287579 | MS.gene062762:intron | 25.0% |
!! | AACACAAAACACATTCATTT+TGG | + | chr1.4:3286978-3286997 | None:intergenic | 25.0% |
!! | ATGGTTTGCAATAATAAATG+TGG | - | chr1.4:3286411-3286430 | MS.gene062762:intron | 25.0% |
!! | GAAGTATAACATTTTATTCC+AGG | + | chr1.4:3287016-3287035 | None:intergenic | 25.0% |
!! | TCATTATAGATATTTGTTGG+AGG | - | chr1.4:3288865-3288884 | MS.gene062762:intron | 25.0% |
!! | TGTACTTTTGTATTTTGTTC+AGG | + | chr1.4:3286179-3286198 | None:intergenic | 25.0% |
!! | TTTTGTCAAAGACAAATTGA+AGG | + | chr1.4:3288502-3288521 | None:intergenic | 25.0% |
!!! | AACTTTTATGTATTGACATG+TGG | - | chr1.4:3287160-3287179 | MS.gene062762:CDS | 25.0% |
!!! | CATGTTTTTAGTTCATAAAG+AGG | - | chr1.4:3286197-3286216 | MS.gene062762:intron | 25.0% |
!!! | GTTAAATATGATTTTAGTCC+TGG | - | chr1.4:3286117-3286136 | MS.gene062762:intron | 25.0% |
!!! | TTTTGTCTGTTTCCTTATTT+AGG | - | chr1.4:3288702-3288721 | MS.gene062762:intron | 25.0% |
AAGCACAAAATTAGTAGCAT+AGG | + | chr1.4:3286845-3286864 | None:intergenic | 30.0% | |
ACTGGAAACAAAATATTTCC+AGG | + | chr1.4:3286138-3286157 | None:intergenic | 30.0% | |
AGTTACCTCATGAAAATTCT+TGG | - | chr1.4:3288432-3288451 | MS.gene062762:intron | 30.0% | |
AGTTTGTGATAAATGAAGGT+GGG | - | chr1.4:3287077-3287096 | MS.gene062762:CDS | 30.0% | |
CACAAATTCAATTTCATGAC+AGG | + | chr1.4:3289289-3289308 | None:intergenic | 30.0% | |
CTTGAGTTTGTGATAAATGA+AGG | - | chr1.4:3287073-3287092 | MS.gene062762:CDS | 30.0% | |
GGACAAAATCAAAATACAGA+TGG | + | chr1.4:3288580-3288599 | None:intergenic | 30.0% | |
GTTTCTTTAATGTTATAGCC+TGG | - | chr1.4:3286995-3287014 | MS.gene062762:intron | 30.0% | |
TAAATAGGGGATGGAAAATA+TGG | + | chr1.4:3289369-3289388 | None:intergenic | 30.0% | |
TCCATATCCATCATAAATAG+GGG | + | chr1.4:3289382-3289401 | None:intergenic | 30.0% | |
TCCTTAGAATGAAATTTGGA+AGG | - | chr1.4:3286740-3286759 | MS.gene062762:intron | 30.0% | |
TCCTTCCAAATTTCATTCTA+AGG | + | chr1.4:3286744-3286763 | None:intergenic | 30.0% | |
TCCTTCCTTAGAATGAAATT+TGG | - | chr1.4:3286736-3286755 | MS.gene062762:intron | 30.0% | |
TCTATACTATAAGGTCATCA+AGG | + | chr1.4:3286579-3286598 | None:intergenic | 30.0% | |
TTGTTCAGGAATTGAAAAGT+GGG | + | chr1.4:3286165-3286184 | None:intergenic | 30.0% | |
TTTCAGAAATAATGCTGAAG+AGG | - | chr1.4:3289098-3289117 | MS.gene062762:intron | 30.0% | |
TTTGTTCAGGAATTGAAAAG+TGG | + | chr1.4:3286166-3286185 | None:intergenic | 30.0% | |
! | ATTGTGATTTAAAACCATGG+TGG | - | chr1.4:3286480-3286499 | MS.gene062762:intron | 30.0% |
! | GCAATTGTGATTTAAAACCA+TGG | - | chr1.4:3286477-3286496 | MS.gene062762:intron | 30.0% |
! | TATGCTACTAATTTTGTGCT+TGG | - | chr1.4:3286844-3286863 | MS.gene062762:intron | 30.0% |
! | TCCAAATTTCATTCTAAGGA+AGG | + | chr1.4:3286740-3286759 | None:intergenic | 30.0% |
! | TCGGATATCTTTAAAGAGTT+CGG | + | chr1.4:3287276-3287295 | None:intergenic | 30.0% |
! | TGAATCCAAGAATTTTCATG+AGG | + | chr1.4:3288440-3288459 | None:intergenic | 30.0% |
! | TTTTGTGCTTGGAAATCTAT+TGG | - | chr1.4:3286855-3286874 | MS.gene062762:intron | 30.0% |
!! | TAGTCTCTATACTCACTTTT+CGG | + | chr1.4:3286255-3286274 | None:intergenic | 30.0% |
!! | TGGAAATATTTTGTTTCCAG+TGG | - | chr1.4:3286137-3286156 | MS.gene062762:intron | 30.0% |
!!! | ACTGATCTGTCTATTTTTGT+AGG | - | chr1.4:3287665-3287684 | MS.gene062762:intron | 30.0% |
!!! | TGTTTTGATATTGATGCACA+TGG | - | chr1.4:3286449-3286468 | MS.gene062762:intron | 30.0% |
AAACCATGGTGGTTCTTTAT+TGG | - | chr1.4:3286491-3286510 | MS.gene062762:intron | 35.0% | |
AAGCTAGAGGATACATACTT+GGG | + | chr1.4:3289431-3289450 | None:intergenic | 35.0% | |
ACGAAAATTGATGGGAACTT+TGG | - | chr1.4:3287225-3287244 | MS.gene062762:CDS | 35.0% | |
ACTTGTACCTGTTTGCAAAT+TGG | + | chr1.4:3288993-3289012 | None:intergenic | 35.0% | |
AGGACAAAGTGCAAACAATT+TGG | + | chr1.4:3289269-3289288 | None:intergenic | 35.0% | |
AGGTAACTATTTGCCTAATC+TGG | + | chr1.4:3288420-3288439 | None:intergenic | 35.0% | |
ATCTAAATGCAAGGCAAGTT+GGG | + | chr1.4:3288478-3288497 | None:intergenic | 35.0% | |
ATGCATGTTTGGAAATCTGT+TGG | + | chr1.4:3286912-3286931 | None:intergenic | 35.0% | |
ATGGAGAGAATAAGACTTTG+TGG | - | chr1.4:3285776-3285795 | MS.gene062762:intron | 35.0% | |
ATGTTGCTCAAATGTTATCG+TGG | + | chr1.4:3289078-3289097 | None:intergenic | 35.0% | |
ATTGAAGGGATCTAAATGCA+AGG | + | chr1.4:3288487-3288506 | None:intergenic | 35.0% | |
CAGCAGAACAAATCAATATG+AGG | + | chr1.4:3288056-3288075 | None:intergenic | 35.0% | |
CGAAAATTGATGGGAACTTT+GGG | - | chr1.4:3287226-3287245 | MS.gene062762:CDS | 35.0% | |
CGAATCAGAAAGTCTATTTC+TGG | - | chr1.4:3288627-3288646 | MS.gene062762:intron | 35.0% | |
CTTATTGCGAATAACCTTGA+CGG | + | chr1.4:3287480-3287499 | None:intergenic | 35.0% | |
GAGAATAAGACTTTGTGGAT+TGG | - | chr1.4:3285781-3285800 | MS.gene062762:intron | 35.0% | |
GAGTTTGTGATAAATGAAGG+TGG | - | chr1.4:3287076-3287095 | MS.gene062762:CDS | 35.0% | |
GTTGTTTATGATGCCAATAC+TGG | - | chr1.4:3287767-3287786 | MS.gene062762:intron | 35.0% | |
TAAATGTTGCCCAGTTCAAA+CGG | + | chr1.4:3287616-3287635 | None:intergenic | 35.0% | |
TAACAGTTTAGGCTTGATGT+TGG | - | chr1.4:3289330-3289349 | MS.gene062762:CDS | 35.0% | |
TAAGCTAGAGGATACATACT+TGG | + | chr1.4:3289432-3289451 | None:intergenic | 35.0% | |
TATCCATCATAAATAGGGGA+TGG | + | chr1.4:3289378-3289397 | None:intergenic | 35.0% | |
TATTTAGGAGGTCAGTCAAA+TGG | - | chr1.4:3288717-3288736 | MS.gene062762:intron | 35.0% | |
TGCAAACAATTTGGTACTCT+AGG | + | chr1.4:3289260-3289279 | None:intergenic | 35.0% | |
TTGTAGAATCTGCTTCAGAT+TGG | + | chr1.4:3288752-3288771 | None:intergenic | 35.0% | |
TTTCCATCCCCTATTTATGA+TGG | - | chr1.4:3289372-3289391 | MS.gene062762:CDS | 35.0% | |
TTTGACTGACCTCCTAAATA+AGG | + | chr1.4:3288717-3288736 | None:intergenic | 35.0% | |
! | AGTATGTATCCTCTAGCTTA+TGG | - | chr1.4:3289432-3289451 | MS.gene062762:CDS | 35.0% |
! | GTTTTGTCCAATTTGCAAAC+AGG | - | chr1.4:3288983-3289002 | MS.gene062762:intron | 35.0% |
! | GTTTTTATGCTTGTGAAGTG+TGG | - | chr1.4:3286370-3286389 | MS.gene062762:intron | 35.0% |
! | TGTCTGCTAGTTTCACTAAT+AGG | - | chr1.4:3288288-3288307 | MS.gene062762:intron | 35.0% |
! | TGTCTGTTTCCTTATTTAGG+AGG | - | chr1.4:3288705-3288724 | MS.gene062762:intron | 35.0% |
!! | ACTTTTGCAGCTTTAACAGA+AGG | + | chr1.4:3287749-3287768 | None:intergenic | 35.0% |
!! | ATATTGATTTGTTCTGCTGC+AGG | - | chr1.4:3288057-3288076 | MS.gene062762:intron | 35.0% |
!! | CAAAGTCTTATTCTCTCCAT+TGG | + | chr1.4:3285776-3285795 | None:intergenic | 35.0% |
!! | CAGAACTACTCTGAAACAAT+CGG | + | chr1.4:3287295-3287314 | None:intergenic | 35.0% |
!! | TCCCCTATTTATGATGGATA+TGG | - | chr1.4:3289378-3289397 | MS.gene062762:CDS | 35.0% |
AAATCATCTGGCCATCAACA+AGG | - | chr1.4:3287914-3287933 | MS.gene062762:intron | 40.0% | |
AACATTTAGCACAGGAGACA+AGG | - | chr1.4:3287628-3287647 | MS.gene062762:intron | 40.0% | |
AAGCAGACATTCTCTCAGTA+TGG | - | chr1.4:3288919-3288938 | MS.gene062762:intron | 40.0% | |
AAGCTAAACGGGACAATGAT+TGG | - | chr1.4:3289129-3289148 | MS.gene062762:intron | 40.0% | |
ACATGTCGAGAATACTAGCT+AGG | + | chr1.4:3286703-3286722 | None:intergenic | 40.0% | |
ACATTTAGCACAGGAGACAA+GGG | - | chr1.4:3287629-3287648 | MS.gene062762:intron | 40.0% | |
ATCAAGCTTTCCGTTTGAAC+TGG | - | chr1.4:3287603-3287622 | MS.gene062762:intron | 40.0% | |
ATCTTTGGACGGAATGTTCA+AGG | + | chr1.4:3288013-3288032 | None:intergenic | 40.0% | |
ATTGACATGTGGCCTAATGA+TGG | - | chr1.4:3287171-3287190 | MS.gene062762:CDS | 40.0% | |
CAACCAATAAAGAACCACCA+TGG | + | chr1.4:3286497-3286516 | None:intergenic | 40.0% | |
CAGAATCATCAGAATCAGCA+TGG | - | chr1.4:3285748-3285767 | MS.gene062762:intron | 40.0% | |
CAGGCTATGACTCAAATGAA+CGG | - | chr1.4:3287842-3287861 | MS.gene062762:intron | 40.0% | |
CCTGTTTATATGCTGGATTG+CGG | + | chr1.4:3289182-3289201 | None:intergenic | 40.0% | |
CTGTAAAACTTTCTCAGCTG+TGG | + | chr1.4:3287552-3287571 | None:intergenic | 40.0% | |
GAGATTGCCTGTTTATATGC+TGG | + | chr1.4:3289189-3289208 | None:intergenic | 40.0% | |
GATCTAAATGCAAGGCAAGT+TGG | + | chr1.4:3288479-3288498 | None:intergenic | 40.0% | |
GATTTGGCATACCTTGTTGA+TGG | + | chr1.4:3287928-3287947 | None:intergenic | 40.0% | |
GTTAAGATACCTGTTGGCAA+GGG | - | chr1.4:3288955-3288974 | MS.gene062762:intron | 40.0% | |
GTTATGACAGAAGATGTTGC+TGG | - | chr1.4:3287377-3287396 | MS.gene062762:CDS | 40.0% | |
GTTATTCGCAATAAGCACAG+CGG | - | chr1.4:3287485-3287504 | MS.gene062762:CDS | 40.0% | |
TACATACTTGGGTCATGATG+AGG | + | chr1.4:3289420-3289439 | None:intergenic | 40.0% | |
TATGGCGGTTACCCTATTTA+TGG | - | chr1.4:3289450-3289469 | MS.gene062762:CDS | 40.0% | |
TCAAGCTTTCCGTTTGAACT+GGG | - | chr1.4:3287604-3287623 | MS.gene062762:intron | 40.0% | |
TGATGATTCTGATGCTGATG+TGG | + | chr1.4:3285739-3285758 | None:intergenic | 40.0% | |
TGGTGATAAGGAACATATGG+CGG | + | chr1.4:3285679-3285698 | None:intergenic | 40.0% | |
TGTAGATGAATCTGAACCGT+TGG | + | chr1.4:3285515-3285534 | None:intergenic | 40.0% | |
TGTTAAGATACCTGTTGGCA+AGG | - | chr1.4:3288954-3288973 | MS.gene062762:intron | 40.0% | |
TTCAGAGGGTTATGGATTTG+TGG | - | chr1.4:3287511-3287530 | MS.gene062762:intron | 40.0% | |
TTGCTCAAATGTTATCGTGG+TGG | + | chr1.4:3289075-3289094 | None:intergenic | 40.0% | |
! | ATGTATCCTCTAGCTTATGG+CGG | - | chr1.4:3289435-3289454 | MS.gene062762:CDS | 40.0% |
! | CAAACCATTTTCCAAACCCA+AGG | + | chr1.4:3286399-3286418 | None:intergenic | 40.0% |
! | CAATTTGTTCCATTAGCGTC+TGG | - | chr1.4:3288378-3288397 | MS.gene062762:intron | 40.0% |
! | GATGCTTTTCGATCCAGATT+AGG | - | chr1.4:3288404-3288423 | MS.gene062762:intron | 40.0% |
! | TGGGAACTTTGGGAATTATG+TGG | - | chr1.4:3287236-3287255 | MS.gene062762:CDS | 40.0% |
! | TGGTGGTGATAAGGAACATA+TGG | + | chr1.4:3285682-3285701 | None:intergenic | 40.0% |
!! | TAGATGGCTAGAAGCATCTT+TGG | + | chr1.4:3288028-3288047 | None:intergenic | 40.0% |
!! | TTGTTGTTTGTTCGTCGTCT+CGG | + | chr1.4:3285542-3285561 | None:intergenic | 40.0% |
AACTGGGCAACATTTAGCAC+AGG | - | chr1.4:3287620-3287639 | MS.gene062762:intron | 45.0% | |
AAGCACAGCGGTATTTCAGA+GGG | - | chr1.4:3287497-3287516 | MS.gene062762:CDS | 45.0% | |
ACAACAACGACAACAACCTC+CGG | - | chr1.4:3285555-3285574 | MS.gene062762:CDS | 45.0% | |
ACCACTTTGCCACCATCATT+AGG | + | chr1.4:3287186-3287205 | None:intergenic | 45.0% | |
ACGGTGTTTACTGTTCTAGC+AGG | - | chr1.4:3287861-3287880 | MS.gene062762:intron | 45.0% | |
AGAATCTGCTTCAGATTGGC+TGG | + | chr1.4:3288748-3288767 | None:intergenic | 45.0% | |
AGATGAAAGCGAGAGATCTC+AGG | - | chr1.4:3287823-3287842 | MS.gene062762:intron | 45.0% | |
AGCAAACTGTTCGTCTCTCT+TGG | - | chr1.4:3289154-3289173 | MS.gene062762:CDS | 45.0% | |
AGCGGTATTTCAGAGGGTTA+TGG | - | chr1.4:3287503-3287522 | MS.gene062762:CDS | 45.0% | |
AGGCTTTGCAGAAGCTAAAC+GGG | - | chr1.4:3289118-3289137 | MS.gene062762:intron | 45.0% | |
AGGGGATGGAAAATATGGAC+CGG | + | chr1.4:3289364-3289383 | None:intergenic | 45.0% | |
ATTGCGAATAACCTTGACGG+AGG | + | chr1.4:3287477-3287496 | None:intergenic | 45.0% | |
CAAACTGTTCGTCTCTCTTG+GGG | - | chr1.4:3289156-3289175 | MS.gene062762:CDS | 45.0% | |
CAGAATCAGCATGGATCCAA+TGG | - | chr1.4:3285757-3285776 | MS.gene062762:intron | 45.0% | |
CCGCAATCCAGCATATAAAC+AGG | - | chr1.4:3289179-3289198 | MS.gene062762:CDS | 45.0% | |
CGAATCCATAGCCCTTTGAA+CGG | + | chr1.4:3287793-3287812 | None:intergenic | 45.0% | |
CGGAAAGCTTGATCAGCATT+TGG | + | chr1.4:3287596-3287615 | None:intergenic | 45.0% | |
GACACCTTGGGTTTGGAAAA+TGG | - | chr1.4:3286392-3286411 | MS.gene062762:intron | 45.0% | |
GAGGCTTTGCAGAAGCTAAA+CGG | - | chr1.4:3289117-3289136 | MS.gene062762:intron | 45.0% | |
GCAAACTGTTCGTCTCTCTT+GGG | - | chr1.4:3289155-3289174 | MS.gene062762:CDS | 45.0% | |
GCAACTCCAAGGAAATCATC+TGG | - | chr1.4:3287902-3287921 | MS.gene062762:intron | 45.0% | |
GCCAACAGGTATCTTAACAG+AGG | + | chr1.4:3288953-3288972 | None:intergenic | 45.0% | |
GCCTCTGTTAAGATACCTGT+TGG | - | chr1.4:3288949-3288968 | MS.gene062762:intron | 45.0% | |
GGAGAGACACATCAAATCAG+AGG | - | chr1.4:3286876-3286895 | MS.gene062762:intron | 45.0% | |
GTGAGTGGCCTCCATAAATA+GGG | + | chr1.4:3289464-3289483 | None:intergenic | 45.0% | |
TAAGCACAGCGGTATTTCAG+AGG | - | chr1.4:3287496-3287515 | MS.gene062762:CDS | 45.0% | |
TAGGCTTGATGTTGGAAGCT+GGG | - | chr1.4:3289338-3289357 | MS.gene062762:CDS | 45.0% | |
TGATAAGGAACATATGGCGG+CGG | + | chr1.4:3285676-3285695 | None:intergenic | 45.0% | |
TGATGGCCAGATGATTTCCT+TGG | + | chr1.4:3287911-3287930 | None:intergenic | 45.0% | |
TGATTCTGATGCTGATGTGG+CGG | + | chr1.4:3285736-3285755 | None:intergenic | 45.0% | |
TGTGAGTGGCCTCCATAAAT+AGG | + | chr1.4:3289465-3289484 | None:intergenic | 45.0% | |
TTAGGCTTGATGTTGGAAGC+TGG | - | chr1.4:3289337-3289356 | MS.gene062762:CDS | 45.0% | |
TTGTGAAGTGTGGACACCTT+GGG | - | chr1.4:3286380-3286399 | MS.gene062762:intron | 45.0% | |
! | AATTGAAAAGTGGGTGCCAC+TGG | + | chr1.4:3286156-3286175 | None:intergenic | 45.0% |
! | CTAGGTTGAGTGTACTAGCT+AGG | + | chr1.4:3286685-3286704 | None:intergenic | 45.0% |
! | CTGTTTTGCTTCTACTGGAG+AGG | - | chr1.4:3285843-3285862 | MS.gene062762:CDS | 45.0% |
! | GGATTGGTGATTTGCATAGC+TGG | - | chr1.4:3285797-3285816 | MS.gene062762:intron | 45.0% |
! | GTTGCTGAAACTGATGGTGA+TGG | + | chr1.4:3285702-3285721 | None:intergenic | 45.0% |
! | TGGTGATTTGCATAGCTGGA+TGG | - | chr1.4:3285801-3285820 | MS.gene062762:CDS | 45.0% |
!! | CATCGCTGTTTTGCTTCTAC+TGG | - | chr1.4:3285838-3285857 | MS.gene062762:CDS | 45.0% |
!! | TGATGGTGATGGTGGTGATA+AGG | + | chr1.4:3285691-3285710 | None:intergenic | 45.0% |
!! | TGGCTAGAAGCATCTTTGGA+CGG | + | chr1.4:3288024-3288043 | None:intergenic | 45.0% |
!!! | ACAAAAAAATTATAAATTTT+AGG | + | chr1.4:3286323-3286342 | None:intergenic | 5.0% |
AAGTGTGGACACCTTGGGTT+TGG | - | chr1.4:3286385-3286404 | MS.gene062762:intron | 50.0% | |
AGCATCATGCCAGACGCTAA+TGG | + | chr1.4:3288390-3288409 | None:intergenic | 50.0% | |
AGTTGCAGCACCAATACGCA+TGG | + | chr1.4:3287888-3287907 | None:intergenic | 50.0% | |
CAAAGGGCTATGGATTCGTC+AGG | - | chr1.4:3287795-3287814 | MS.gene062762:intron | 50.0% | |
CTTGGGTCATGATGAGGAGA+AGG | + | chr1.4:3289414-3289433 | None:intergenic | 50.0% | |
CTTGTGAAGTGTGGACACCT+TGG | - | chr1.4:3286379-3286398 | MS.gene062762:intron | 50.0% | |
GACATGTGGCCTAATGATGG+TGG | - | chr1.4:3287174-3287193 | MS.gene062762:CDS | 50.0% | |
GCAACGGTTGCTGAAACTGA+TGG | + | chr1.4:3285708-3285727 | None:intergenic | 50.0% | |
GCCAATACTGGCCGTTCAAA+GGG | - | chr1.4:3287779-3287798 | MS.gene062762:intron | 50.0% | |
GGCGGTTACCCTATTTATGG+AGG | - | chr1.4:3289453-3289472 | MS.gene062762:CDS | 50.0% | |
GGCTATGGATTCGTCAGGTT+CGG | - | chr1.4:3287800-3287819 | MS.gene062762:intron | 50.0% | |
GTTGCAGCACCAATACGCAT+GGG | + | chr1.4:3287887-3287906 | None:intergenic | 50.0% | |
TAGCACAGGAGACAAGGGAT+CGG | - | chr1.4:3287634-3287653 | MS.gene062762:intron | 50.0% | |
TCCGATGCAGTATCCAACAG+CGG | - | chr1.4:3285606-3285625 | MS.gene062762:CDS | 50.0% | |
TGAGGTGGCATCATGTGATG+TGG | + | chr1.4:3285643-3285662 | None:intergenic | 50.0% | |
TGCATCGGAATCCACTGTTG+TGG | + | chr1.4:3285595-3285614 | None:intergenic | 50.0% | |
TGCCAATACTGGCCGTTCAA+AGG | - | chr1.4:3287778-3287797 | MS.gene062762:intron | 50.0% | |
TGTGCAGATTACCTCCGTCA+AGG | - | chr1.4:3287463-3287482 | MS.gene062762:CDS | 50.0% | |
TGTTTGTTCGTCGTCTCGGA+CGG | + | chr1.4:3285538-3285557 | None:intergenic | 50.0% | |
!! | GCCTAATGATGGTGGCAAAG+TGG | - | chr1.4:3287182-3287201 | MS.gene062762:CDS | 50.0% |
!! | GCTGAAACTGATGGTGATGG+TGG | + | chr1.4:3285699-3285718 | None:intergenic | 50.0% |
!! | GTATTGGTGCTGCAACTCCA+AGG | - | chr1.4:3287891-3287910 | MS.gene062762:intron | 50.0% |
AAACCACAGCCCTTGCCAAC+AGG | + | chr1.4:3288967-3288986 | None:intergenic | 55.0% | |
ACTGGCCGTTCAAAGGGCTA+TGG | - | chr1.4:3287785-3287804 | MS.gene062762:intron | 55.0% | |
ATACCTGTTGGCAAGGGCTG+TGG | - | chr1.4:3288961-3288980 | MS.gene062762:intron | 55.0% | |
CTTGATGTTGGAAGCTGGGC+CGG | - | chr1.4:3289342-3289361 | MS.gene062762:CDS | 55.0% | |
GCCCTTTGAACGGCCAGTAT+TGG | + | chr1.4:3287783-3287802 | None:intergenic | 55.0% | |
GCCGCTGTTGGATACTGCAT+CGG | + | chr1.4:3285610-3285629 | None:intergenic | 55.0% | |
GGGTAACCGCCATAAGCTAG+AGG | + | chr1.4:3289444-3289463 | None:intergenic | 55.0% | |
TCTAGCAGGCCCATGCGTAT+TGG | - | chr1.4:3287875-3287894 | MS.gene062762:intron | 55.0% | |
ACGACAACAACCTCCGGCAC+CGG | - | chr1.4:3285561-3285580 | MS.gene062762:CDS | 60.0% | |
CACTGTTGTGGTACCGCCAC+CGG | + | chr1.4:3285583-3285602 | None:intergenic | 60.0% | |
GCAGTATCCAACAGCGGCGA+TGG | - | chr1.4:3285612-3285631 | MS.gene062762:CDS | 60.0% | |
GGCATTACCATCGCCGCTGT+TGG | + | chr1.4:3285622-3285641 | None:intergenic | 60.0% | |
TGATGTGGCGGCACGTGCAA+CGG | + | chr1.4:3285724-3285743 | None:intergenic | 60.0% | |
GGCGGCGCGTAATGTTGAGG+TGG | + | chr1.4:3285658-3285677 | None:intergenic | 65.0% | |
! | ACAACAACCTCCGGCACCGG+TGG | - | chr1.4:3285564-3285583 | MS.gene062762:CDS | 65.0% |
! | CGGTGGCGGTACCACAACAG+TGG | - | chr1.4:3285581-3285600 | MS.gene062762:CDS | 65.0% |
GGCGGCGGCGCGTAATGTTG+AGG | + | chr1.4:3285661-3285680 | None:intergenic | 70.0% | |
TGTGGTACCGCCACCGGTGC+CGG | + | chr1.4:3285577-3285596 | None:intergenic | 70.0% | |
!! | ACAACCTCCGGCACCGGTGG+CGG | - | chr1.4:3285567-3285586 | MS.gene062762:CDS | 70.0% |
!! | GGTACCGCCACCGGTGCCGG+AGG | + | chr1.4:3285574-3285593 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 3285502 | 3289497 | 3285502 | ID=MS.gene062762 |
chr1.4 | mRNA | 3285502 | 3289497 | 3285502 | ID=MS.gene062762.t1;Parent=MS.gene062762 |
chr1.4 | exon | 3289135 | 3289497 | 3289135 | ID=MS.gene062762.t1.exon1;Parent=MS.gene062762.t1 |
chr1.4 | CDS | 3289135 | 3289497 | 3289135 | ID=cds.MS.gene062762.t1;Parent=MS.gene062762.t1 |
chr1.4 | exon | 3287064 | 3287529 | 3287064 | ID=MS.gene062762.t1.exon2;Parent=MS.gene062762.t1 |
chr1.4 | CDS | 3287064 | 3287529 | 3287064 | ID=cds.MS.gene062762.t1;Parent=MS.gene062762.t1 |
chr1.4 | exon | 3286220 | 3286275 | 3286220 | ID=MS.gene062762.t1.exon3;Parent=MS.gene062762.t1 |
chr1.4 | CDS | 3286220 | 3286275 | 3286220 | ID=cds.MS.gene062762.t1;Parent=MS.gene062762.t1 |
chr1.4 | exon | 3285995 | 3286125 | 3285995 | ID=MS.gene062762.t1.exon4;Parent=MS.gene062762.t1 |
chr1.4 | CDS | 3285995 | 3286125 | 3285995 | ID=cds.MS.gene062762.t1;Parent=MS.gene062762.t1 |
chr1.4 | exon | 3285799 | 3285895 | 3285799 | ID=MS.gene062762.t1.exon5;Parent=MS.gene062762.t1 |
chr1.4 | CDS | 3285799 | 3285895 | 3285799 | ID=cds.MS.gene062762.t1;Parent=MS.gene062762.t1 |
chr1.4 | exon | 3285502 | 3285663 | 3285502 | ID=MS.gene062762.t1.exon6;Parent=MS.gene062762.t1 |
chr1.4 | CDS | 3285502 | 3285663 | 3285502 | ID=cds.MS.gene062762.t1;Parent=MS.gene062762.t1 |
Gene Sequence |
Protein sequence |