AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013003

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013003.t1 MTR_3g101370 93.795 419 4 1 1 397 1 419 0.0 809
MS.gene013003.t1 MTR_3g101370 90.816 294 5 1 1 272 1 294 0.0 548
MS.gene013003.t1 MTR_1g020080 66.513 433 100 9 1 397 1 424 0.0 529
MS.gene013003.t1 MTR_4g086600 59.736 303 92 6 68 351 124 415 2.91e-118 357
MS.gene013003.t1 MTR_1g020080 61.489 309 80 5 1 277 1 302 1.21e-115 345
MS.gene013003.t1 MTR_4g131970 51.977 354 152 9 41 388 52 393 4.73e-106 324
MS.gene013003.t1 MTR_2g022950 55.921 304 128 3 97 394 86 389 5.74e-102 313
MS.gene013003.t1 MTR_2g097960 52.475 303 116 5 97 372 41 342 4.11e-97 301
MS.gene013003.t1 MTR_2g022950 62.420 157 58 1 97 252 86 242 5.15e-61 202
MS.gene013003.t1 MTR_2g022950 62.420 157 58 1 97 252 86 242 3.36e-60 201
MS.gene013003.t1 MTR_3g109090 31.461 267 153 6 97 343 70 326 2.51e-31 126
MS.gene013003.t1 MTR_3g109090 31.461 267 153 6 97 343 86 342 2.94e-31 126
MS.gene013003.t1 MTR_4g124940 31.086 267 147 8 100 343 75 327 2.32e-28 117
MS.gene013003.t1 MTR_8g022050 31.873 251 143 9 114 343 101 344 1.75e-26 112
MS.gene013003.t1 MTR_4g085540 27.969 261 172 6 97 349 148 400 1.82e-24 108
MS.gene013003.t1 MTR_4g085540 26.038 265 167 10 92 351 55 295 4.76e-17 84.7
MS.gene013003.t1 MTR_4g085540 31.429 175 98 4 166 335 35 192 1.59e-16 83.2
MS.gene013003.t1 MTR_1g019150 27.413 259 177 7 97 349 146 399 9.31e-21 96.7
MS.gene013003.t1 MTR_1g019150 24.906 265 170 8 92 351 53 293 6.13e-16 81.3
MS.gene013003.t1 MTR_1g097440 27.547 265 166 10 97 356 56 299 4.88e-19 91.3
MS.gene013003.t1 MTR_1g097440 26.000 250 160 9 97 333 144 381 8.64e-15 77.8
MS.gene013003.t1 MTR_6g040190 29.008 262 154 10 97 352 51 286 7.81e-19 90.5
MS.gene013003.t1 MTR_6g040190 27.933 179 107 4 166 339 26 187 7.05e-13 71.6
MS.gene013003.t1 MTR_6g040190 22.182 275 189 8 88 347 122 386 1.51e-12 70.5
MS.gene013003.t1 MTR_7g102730 24.812 266 167 8 90 347 31 271 1.56e-18 89.4
MS.gene013003.t1 MTR_7g102730 27.197 239 158 6 97 327 124 354 1.03e-16 84.0
MS.gene013003.t1 MTR_7g102730 28.090 178 100 4 166 335 11 168 1.05e-13 74.3
MS.gene013003.t1 MTR_3g102040 23.929 280 195 6 83 349 116 390 3.44e-17 85.1
MS.gene013003.t1 MTR_3g102040 24.746 295 191 9 65 352 16 286 1.50e-15 80.1
MS.gene013003.t1 MTR_1g061870 24.219 256 169 7 97 347 41 276 5.99e-17 84.3
MS.gene013003.t1 MTR_1g061870 31.638 177 91 5 163 330 13 168 3.97e-14 75.5
MS.gene013003.t1 MTR_6g040070 23.675 283 192 9 83 349 19 293 1.54e-15 80.5
MS.gene013003.t1 MTR_6g040070 29.592 196 117 6 166 356 16 195 5.16e-14 75.5
MS.gene013003.t1 MTR_3g065190 28.000 175 114 4 97 271 51 213 4.73e-15 77.4
MS.gene013003.t1 MTR_4g104470 28.022 182 110 4 164 337 121 289 8.59e-15 75.5
MS.gene013003.t1 MTR_4g104470 30.968 155 86 5 101 245 152 295 1.90e-13 71.6
MS.gene013003.t1 MTR_7g107580 24.615 260 156 8 153 389 4 246 1.96e-13 72.4
MS.gene013003.t1 MTR_1g080150 36.782 87 54 1 164 250 131 216 2.02e-13 70.5
MS.gene013003.t1 MTR_3g075500 29.870 154 100 3 101 249 139 289 2.49e-13 71.2
MS.gene013003.t1 MTR_1g064230 27.103 214 138 6 150 348 70 280 3.84e-13 70.5
MS.gene013003.t1 MTR_7g107580 24.615 260 156 8 153 389 4 246 5.50e-13 71.2
MS.gene013003.t1 MTR_4g068120 23.810 189 116 3 153 341 15 175 1.05e-12 71.6
MS.gene013003.t1 MTR_7g118120 21.790 257 171 6 97 347 130 362 1.34e-12 70.5
MS.gene013003.t1 MTR_7g107580 24.138 261 157 8 153 389 4 247 3.40e-12 68.9
MS.gene013003.t1 MTR_3g079200 41.558 77 44 1 266 341 224 300 1.53e-11 67.0
MS.gene013003.t1 MTR_3g075500 30.597 134 85 3 101 229 139 269 4.07e-11 64.3
MS.gene013003.t1 MTR_7g094660 27.119 177 113 4 160 328 636 804 6.00e-11 65.9
MS.gene013003.t1 MTR_1g045510 31.126 151 94 5 100 247 142 285 6.74e-11 63.5
MS.gene013003.t1 MTR_1g056520 27.811 169 111 4 97 257 134 299 6.88e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013003.t1 AT1G47490 61.250 400 114 11 30 397 41 431 1.37e-159 461
MS.gene013003.t1 AT1G47500 61.619 383 116 6 44 397 53 433 2.89e-152 443
MS.gene013003.t1 AT3G19130 52.078 409 144 6 1 358 1 408 1.97e-129 385
MS.gene013003.t1 AT1G49600 59.574 329 96 6 86 383 112 434 1.23e-128 383
MS.gene013003.t1 AT1G49600 61.074 298 84 3 86 352 112 408 7.68e-123 368
MS.gene013003.t1 AT1G49600 61.074 298 84 3 86 352 112 408 7.68e-123 368
MS.gene013003.t1 AT1G11650 48.663 374 139 9 44 376 2 363 2.88e-101 311
MS.gene013003.t1 AT5G54900 51.724 319 117 6 88 377 55 365 4.32e-95 295
MS.gene013003.t1 AT4G27000 57.028 249 106 1 99 347 108 355 5.71e-92 288
MS.gene013003.t1 AT1G47490 54.909 275 87 8 30 274 41 308 6.52e-90 279
MS.gene013003.t1 AT1G47490 28.125 192 116 7 156 337 92 271 1.15e-12 69.3
MS.gene013003.t1 AT5G19350 46.608 339 129 8 84 372 15 351 4.45e-88 278
MS.gene013003.t1 AT5G19350 45.773 343 130 8 84 372 15 355 2.77e-87 276
MS.gene013003.t1 AT1G11650 48.232 311 116 6 44 315 2 306 4.60e-84 263
MS.gene013003.t1 AT1G47500 54.475 257 90 3 44 273 53 309 1.30e-81 258
MS.gene013003.t1 AT1G47500 26.702 191 120 5 156 337 94 273 6.53e-11 64.3
MS.gene013003.t1 AT1G54080 35.206 267 143 11 97 343 89 345 4.74e-32 128
MS.gene013003.t1 AT1G54080 25.946 185 111 5 166 344 64 228 4.07e-11 65.5
MS.gene013003.t1 AT1G54080 34.686 271 143 12 97 343 89 349 1.94e-30 124
MS.gene013003.t1 AT1G54080 26.455 189 109 5 166 344 64 232 8.58e-11 64.7
MS.gene013003.t1 AT1G17370 32.331 266 149 10 97 343 80 333 2.59e-29 120
MS.gene013003.t1 AT1G17370 31.461 267 153 9 97 343 80 336 3.12e-29 120
MS.gene013003.t1 AT3G14100 32.584 267 150 9 97 343 85 341 5.54e-29 119
MS.gene013003.t1 AT3G14100 25.946 185 111 5 166 344 60 224 3.24e-11 65.9
MS.gene013003.t1 AT1G71770 25.448 279 190 7 83 347 150 424 1.55e-22 102
MS.gene013003.t1 AT1G71770 24.074 270 175 9 92 352 80 328 3.90e-18 88.6
MS.gene013003.t1 AT1G71770 25.448 279 190 7 83 347 150 424 1.55e-22 102
MS.gene013003.t1 AT1G71770 24.074 270 175 9 92 352 80 328 3.90e-18 88.6
MS.gene013003.t1 AT2G23350 28.571 294 172 12 83 352 138 417 3.81e-21 97.8
MS.gene013003.t1 AT2G23350 24.653 288 178 10 93 369 68 327 1.22e-14 77.4
MS.gene013003.t1 AT2G23350 29.545 176 102 3 165 335 46 204 1.25e-14 77.4
MS.gene013003.t1 AT4G34110 27.586 261 173 7 97 349 150 402 4.11e-21 97.8
MS.gene013003.t1 AT4G34110 27.426 237 145 7 97 327 62 277 2.25e-19 92.0
MS.gene013003.t1 AT4G34110 33.143 175 95 4 166 335 37 194 3.03e-17 85.5
MS.gene013003.t1 AT1G22760 24.911 281 189 8 83 347 140 414 6.88e-21 97.1
MS.gene013003.t1 AT1G22760 24.715 263 172 10 97 352 75 318 6.16e-17 84.7
MS.gene013003.t1 AT1G22760 30.337 178 101 5 163 335 47 206 1.46e-12 70.9
MS.gene013003.t1 AT1G49760 25.077 323 216 10 97 402 159 472 1.01e-18 90.1
MS.gene013003.t1 AT1G49760 33.714 175 94 4 166 335 46 203 2.37e-18 89.0
MS.gene013003.t1 AT1G49760 28.033 239 145 8 97 329 71 288 4.10e-15 79.0
MS.gene013003.t1 AT1G49760 25.077 323 216 10 97 402 159 472 1.01e-18 90.1
MS.gene013003.t1 AT1G49760 33.714 175 94 4 166 335 46 203 2.37e-18 89.0
MS.gene013003.t1 AT1G49760 28.033 239 145 8 97 329 71 288 4.10e-15 79.0
MS.gene013003.t1 AT1G34140 25.850 294 188 10 83 359 35 315 2.03e-18 88.2
MS.gene013003.t1 AT3G16380 27.547 265 174 8 97 352 138 393 1.59e-16 83.2
MS.gene013003.t1 AT3G16380 28.796 191 104 5 150 330 8 176 4.51e-11 65.9
MS.gene013003.t1 AT2G36660 21.673 263 177 8 97 352 50 290 3.19e-14 75.9
MS.gene013003.t1 AT2G36660 24.609 256 172 8 110 354 150 395 7.08e-14 74.7
MS.gene013003.t1 AT2G36660 27.429 175 105 4 166 335 25 182 8.48e-13 71.2
MS.gene013003.t1 AT3G04500 33.028 109 67 2 164 272 136 238 4.25e-13 69.7
MS.gene013003.t1 AT4G24770 31.973 147 95 3 101 245 180 323 5.63e-13 70.5
MS.gene013003.t1 AT4G24770 31.973 147 95 3 101 245 180 323 5.63e-13 70.5
MS.gene013003.t1 AT3G52380 27.950 161 102 3 97 246 142 299 8.18e-13 70.1
MS.gene013003.t1 AT2G37220 25.789 190 125 4 164 338 90 278 9.45e-13 69.3
MS.gene013003.t1 AT4G14300 29.885 174 115 2 167 334 8 180 1.07e-12 70.5
MS.gene013003.t1 AT4G14300 29.885 174 115 2 167 334 8 180 1.07e-12 70.5
MS.gene013003.t1 AT2G18510 25.714 175 118 4 97 271 51 213 2.43e-12 68.9
MS.gene013003.t1 AT3G13224 26.519 181 111 5 167 340 21 186 5.82e-12 66.2
MS.gene013003.t1 AT1G58470 26.877 253 147 8 167 388 8 253 6.20e-12 67.8
MS.gene013003.t1 AT1G58470 26.877 253 147 8 167 388 8 253 6.20e-12 67.8
MS.gene013003.t1 AT5G50250 27.119 177 112 4 167 337 115 280 8.17e-12 66.6
MS.gene013003.t1 AT5G50250 31.293 147 96 3 101 245 143 286 2.25e-11 65.5
MS.gene013003.t1 AT1G07360 38.272 81 49 1 262 341 220 300 1.15e-11 67.4
MS.gene013003.t1 AT1G60000 29.677 155 90 5 100 246 114 257 1.88e-11 65.1
MS.gene013003.t1 AT3G13224 25.424 177 111 4 167 337 12 173 2.10e-11 65.9
MS.gene013003.t1 AT2G29580 38.272 81 49 1 262 341 220 300 2.66e-11 66.2
MS.gene013003.t1 AT3G13224 25.424 177 111 4 167 337 21 182 3.09e-11 65.5
MS.gene013003.t1 AT4G13850 38.272 81 49 1 167 247 37 116 3.41e-11 61.2
MS.gene013003.t1 AT4G13850 37.805 82 50 1 167 248 37 117 6.19e-11 61.2
MS.gene013003.t1 AT4G13850 37.805 82 50 1 167 248 37 117 7.53e-11 61.2
MS.gene013003.t1 AT4G13850 37.805 82 50 1 167 248 37 117 8.37e-11 61.2

Find 181 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATTGCGAATAACCTTAA+TGG 0.180225 3.2:+84408414 None:intergenic
TGGAATGGGCCAGCATATTA+TGG 0.197016 3.2:-84406588 MS.gene013003:CDS
AGGGAGAAGCGGCGGCTATT+AGG 0.212169 3.2:+84405128 None:intergenic
ATGTGACTTGGATTCTATTC+TGG 0.246078 3.2:+84406007 None:intergenic
AGCAAACAGTTCGTCTTTCT+TGG 0.248297 3.2:-84407070 MS.gene013003:CDS
GCTTAGCGGGTTGGGCAGTT+TGG 0.265175 3.2:+84405417 None:intergenic
CGGTTCGGGCTTAGCGGGTT+GGG 0.291837 3.2:+84405409 None:intergenic
TATACTGGGTCGGTCGGTAT+TGG 0.300959 3.2:+84405280 None:intergenic
CTTAGCGGGTTGGGCAGTTT+GGG 0.306193 3.2:+84405418 None:intergenic
ACCGTTGGACCCGCTTTAAC+CGG 0.320843 3.2:+84405371 None:intergenic
GCAAACAGTTCGTCTTTCTT+GGG 0.324805 3.2:-84407069 MS.gene013003:CDS
GGGAGAAGCGGCGGCTATTA+GGG 0.341664 3.2:+84405129 None:intergenic
GCGGGTTGGGCAGTTTGGGC+CGG 0.344121 3.2:+84405422 None:intergenic
CGGTTTCAAAAGAATGGTTT+GGG 0.348209 3.2:-84405352 MS.gene013003:CDS
GAAGCATTGCAGAAGCTAAA+TGG 0.357684 3.2:-84407107 MS.gene013003:CDS
TAACCCGACCGAAGCGGTTC+GGG 0.359735 3.2:+84405395 None:intergenic
ACAATTACCTGCTTATTTGC+CGG 0.361642 3.2:+84407038 None:intergenic
ATAATATGCTGGCCCATTCC+AGG 0.364439 3.2:+84406590 None:intergenic
ACGGTTTCAAAAGAATGGTT+TGG 0.365870 3.2:-84405353 MS.gene013003:CDS
CGGGTTGGGCAGTTTGGGCC+GGG 0.368965 3.2:+84405423 None:intergenic
CAGAGACTATCTCACCATAC+TGG 0.369249 3.2:+84407302 None:intergenic
CTGTTGGTGTCCTCCATACA+TGG 0.369434 3.2:+84406491 None:intergenic
ACCGGACGTTCAAAGGGTTA+TGG 0.372671 3.2:-84408103 MS.gene013003:CDS
GGTTATGGTTTCGTCAGGTT+TGG 0.373844 3.2:-84408088 MS.gene013003:CDS
ACCCTTTGAACGTCCGGTAT+TGG 0.373855 3.2:+84408108 None:intergenic
GGCTGGGTGTGCCGTTTGAT+TGG 0.374274 3.2:+84407489 None:intergenic
CTGCTGATAATAAAACTCTC+TGG 0.376726 3.2:-84409398 MS.gene013003:CDS
GATGCATTATAGATATTTGT+TGG 0.384978 3.2:-84407373 MS.gene013003:intron
TCTTTCTTGGGGCCGCAATC+CGG 0.397217 3.2:-84407057 MS.gene013003:CDS
GGACCTGCTTATGATGGTTA+TGG 0.398241 3.2:-84406564 MS.gene013003:CDS
ACCGCTTCGGTCGGGTTATC+CGG 0.399557 3.2:-84405390 MS.gene013003:CDS
ATACTGGGTCGGTCGGTATT+GGG 0.399597 3.2:+84405281 None:intergenic
GAAACGGCCGGAGGGAGAAA+TGG 0.409478 3.2:+84405087 None:intergenic
TGCTAAATGTCGCCCAGTTA+AGG 0.409625 3.2:+84408275 None:intergenic
TCGGTTCGGTTTGAGTTTAG+TGG 0.411046 3.2:-84405314 MS.gene013003:CDS
CATTCAGACCAAATGTGACT+TGG 0.411630 3.2:+84405995 None:intergenic
CCGAAGCGGTTCGGGCTTAG+CGG 0.412522 3.2:+84405403 None:intergenic
GGAATGGGCCAGCATATTAT+GGG 0.413282 3.2:-84406587 MS.gene013003:CDS
CAAGTCACATTTGGTCTGAA+TGG 0.414975 3.2:-84405994 MS.gene013003:CDS
CGAAAAGGTTGCTCTGTGTT+AGG 0.415515 3.2:+84408298 None:intergenic
GCGGTTCGGGCTTAGCGGGT+TGG 0.419600 3.2:+84405408 None:intergenic
CAAAGGGTTATGGTTTCGTC+AGG 0.421280 3.2:-84408093 MS.gene013003:CDS
AGAATGGTTTGGGCTGGTTA+AGG 0.421650 3.2:-84405342 MS.gene013003:CDS
GTCCAACGGTTTCAAAAGAA+TGG 0.421877 3.2:-84405358 MS.gene013003:CDS
AATAGAATCCAAGTCACATT+TGG 0.430612 3.2:-84406003 MS.gene013003:CDS
ATAACCCGACCGAAGCGGTT+CGG 0.431701 3.2:+84405394 None:intergenic
CTATTCTGGAATTCTGCAAT+TGG 0.435107 3.2:+84406021 None:intergenic
AGAAATGGCGGAGGGAGAAA+CGG 0.437197 3.2:+84405102 None:intergenic
CGAAGCGGTTCGGGCTTAGC+GGG 0.442851 3.2:+84405404 None:intergenic
TCATTTAGCTTACTTGCTGT+TGG 0.448711 3.2:+84406475 None:intergenic
AGACAACCATTCTCCCAGTA+TGG 0.449229 3.2:-84407316 MS.gene013003:CDS
GGAACCCACTGGTGCGGTGG+TGG 0.454001 3.2:+84409558 None:intergenic
TCTAGCAGGGCAATGCGAAT+TGG 0.457296 3.2:-84408013 MS.gene013003:CDS
GCATACATGCTCTGGTCATA+AGG 0.457460 3.2:+84406525 None:intergenic
ACCATAACCCTTTGAACGTC+CGG 0.459242 3.2:+84408102 None:intergenic
TTGTAACTCCTCGATAAAAT+CGG 0.459822 3.2:+84406067 None:intergenic
AGAATCAGCATCAGATTGGC+TGG 0.462991 3.2:+84407472 None:intergenic
CCGCTAAGCCCGAACCGCTT+CGG 0.465933 3.2:-84405403 MS.gene013003:CDS
AACAGAGGGGTATGGATTTG+TGG 0.467857 3.2:-84408380 MS.gene013003:CDS
TTGGGCAGTTTGGGCCGGGT+TGG 0.468789 3.2:+84405427 None:intergenic
TGCCAATACCGGACGTTCAA+AGG 0.470787 3.2:-84408110 MS.gene013003:CDS
GCTGCTGCTTACCCCATGTA+TGG 0.473026 3.2:-84406504 MS.gene013003:CDS
TAGCAGTTTAGATCTGAATT+CGG 0.474047 3.2:-84406618 MS.gene013003:intron
TGGTTAAGGAAGGGTCGGTT+CGG 0.474607 3.2:-84405328 MS.gene013003:CDS
GGCGGAGGGAGAAACGGCGG+AGG 0.475171 3.2:+84405108 None:intergenic
GTTAAGATACCTGTTGGAAA+AGG 0.477975 3.2:-84407280 MS.gene013003:CDS
CGGTTCGGTTTGAGTTTAGT+GGG 0.480738 3.2:-84405313 MS.gene013003:CDS
GATCTGAATTCGGCAGTCCC+TGG 0.480859 3.2:-84406608 MS.gene013003:CDS
GCCAATACCGGACGTTCAAA+GGG 0.484393 3.2:-84408109 MS.gene013003:CDS
AATTCGGCAGTCCCTGGAAT+GGG 0.485665 3.2:-84406602 MS.gene013003:CDS
TTGTTATTACTCTGCTCCGT+TGG 0.489383 3.2:+84409633 None:intergenic
TTCGTCAGGTTTGGAGATGA+TGG 0.490103 3.2:-84408079 MS.gene013003:CDS
AGATCTTCAGCGGTAGCACT+AGG 0.494702 3.2:+84407340 None:intergenic
GTCTCTGTTAAGATACCTGT+TGG 0.495294 3.2:-84407286 MS.gene013003:CDS
CGGAGCAGAGTAATAACAAC+AGG 0.497406 3.2:-84409629 MS.gene013003:CDS
CACGTGCCTCACGTGCATCA+TGG 0.499582 3.2:-84409429 MS.gene013003:CDS
AGAAACGGCGGAGGGAGAAG+CGG 0.499640 3.2:+84405117 None:intergenic
GCAATATCCACCGGCGGCAA+TGG 0.502503 3.2:-84409532 MS.gene013003:CDS
AAGCCCGAACCGCTTCGGTC+GGG 0.502778 3.2:-84405398 MS.gene013003:CDS
TCCGGTTAAAGCGGGTCCAA+CGG 0.502856 3.2:-84405372 MS.gene013003:CDS
GAACGATGTGAGGAGAGATC+TGG 0.504457 3.2:+84405036 None:intergenic
TGGTTTGGGCTGGTTAAGGA+AGG 0.507057 3.2:-84405338 MS.gene013003:CDS
TTCAAAAGAATGGTTTGGGC+TGG 0.508606 3.2:-84405348 MS.gene013003:CDS
ATCTCACCATACTGGGAGAA+TGG 0.509590 3.2:+84407310 None:intergenic
CCCTCCGCCATTTCTCCCTC+CGG 0.510432 3.2:-84405094 MS.gene013003:CDS
AAGCAGCAGCATACATGCTC+TGG 0.510563 3.2:+84406517 None:intergenic
TAAGCCCGAACCGCTTCGGT+CGG 0.512877 3.2:-84405399 MS.gene013003:CDS
AAGGCGGAGCGAGAAACGGC+CGG 0.516030 3.2:+84405075 None:intergenic
GCCGCCACCACACCATTACA+TGG 0.516888 3.2:-84409472 MS.gene013003:CDS
TGATAGCCAGAGGATTTCCT+AGG 0.520577 3.2:+84407980 None:intergenic
AGAAAAGGCGGAGCGAGAAA+CGG 0.520741 3.2:+84405071 None:intergenic
AAGCTAAATGGTACAACAGT+TGG 0.520807 3.2:-84407095 MS.gene013003:CDS
CCTGCTTATTTGCCGGATTG+CGG 0.521827 3.2:+84407045 None:intergenic
CCGCAATCCGGCAAATAAGC+AGG 0.521834 3.2:-84407045 MS.gene013003:intron
TTGTAGAATCAGCATCAGAT+TGG 0.522042 3.2:+84407468 None:intergenic
GTCGCCCAGTTAAGGCGAAA+AGG 0.523550 3.2:+84408283 None:intergenic
ATACCTGTTGGAAAAGGATG+TGG 0.524194 3.2:-84407274 MS.gene013003:CDS
TCTGGAATTCTGCAATTGGT+AGG 0.524765 3.2:+84406025 None:intergenic
TGGAACAACAAAGTGAGAAA+AGG 0.527901 3.2:+84405056 None:intergenic
CAAACAGTTCGTCTTTCTTG+GGG 0.528594 3.2:-84407068 MS.gene013003:CDS
GAATTGGTGCTGCAACTCCT+AGG 0.534133 3.2:-84407997 MS.gene013003:CDS
GTTTGAGTTTAGTGGGCCAT+CGG 0.534297 3.2:-84405306 MS.gene013003:CDS
TCACATTTGGTCTGAATGGA+AGG 0.538753 3.2:-84405990 MS.gene013003:intron
TCGGGTTATCCGGTTAAAGC+GGG 0.539333 3.2:-84405380 MS.gene013003:CDS
TGGACAAGAAACAGCCAACC+CGG 0.539592 3.2:-84405441 MS.gene013003:CDS
GCCGGAGGGAGAAATGGCGG+AGG 0.545443 3.2:+84405093 None:intergenic
ACTTGTCAAACAGAGGGGTA+TGG 0.546421 3.2:-84408388 MS.gene013003:CDS
CTTTAGCAGCTTTAACTGAA+GGG 0.546481 3.2:+84408143 None:intergenic
GTGGTATATACTGGGTCGGT+CGG 0.547438 3.2:+84405274 None:intergenic
GAATTCGGCAGTCCCTGGAA+TGG 0.547857 3.2:-84406603 MS.gene013003:CDS
TGCTGATAATAAAACTCTCT+GGG 0.549803 3.2:-84409397 MS.gene013003:intron
CAGCGGTAGCACTAGGGTCA+AGG 0.553945 3.2:+84407347 None:intergenic
ACTTTAGCAGCTTTAACTGA+AGG 0.557323 3.2:+84408142 None:intergenic
TATACAGGAGGCCAATCAAA+CGG 0.557602 3.2:-84407500 MS.gene013003:intron
GTCGGGTTATCCGGTTAAAG+CGG 0.562428 3.2:-84405381 MS.gene013003:CDS
TATCCATAACCATCATAAGC+AGG 0.565694 3.2:+84406561 None:intergenic
GCGGAGGGAGAAACGGCGGA+GGG 0.566847 3.2:+84405109 None:intergenic
GCCATGTAATGGTGTGGTGG+CGG 0.567433 3.2:+84409471 None:intergenic
CGGAGCGAGAAACGGCCGGA+GGG 0.567942 3.2:+84405079 None:intergenic
TGGGCTGGTTAAGGAAGGGT+CGG 0.574757 3.2:-84405333 MS.gene013003:CDS
GCAACTCCTAGGAAATCCTC+TGG 0.574768 3.2:-84407986 MS.gene013003:CDS
TTTGTGGAATTCACTTCACA+TGG 0.575027 3.2:-84408364 MS.gene013003:CDS
TAATATGCTGGCCCATTCCA+GGG 0.576839 3.2:+84406591 None:intergenic
AGAGACTATCTCACCATACT+GGG 0.577197 3.2:+84407303 None:intergenic
ACGGCCGGAGGGAGAAATGG+CGG 0.577459 3.2:+84405090 None:intergenic
GTGAAGATGCAATCAACAAA+CGG 0.577977 3.2:-84409669 None:intergenic
GCATTATAGATATTTGTTGG+AGG 0.579075 3.2:-84407370 MS.gene013003:intron
GATATTGCATCGGAACCCAC+TGG 0.583710 3.2:+84409547 None:intergenic
AACGGCGGAGGGAGAAGCGG+CGG 0.584552 3.2:+84405120 None:intergenic
ATGTAATGGTGTGGTGGCGG+CGG 0.586592 3.2:+84409474 None:intergenic
CAGTTCCACCACCGCACCAG+TGG 0.589533 3.2:-84409563 MS.gene013003:CDS
AAGCAGACTTGTCAAACAGA+GGG 0.590205 3.2:-84408394 MS.gene013003:CDS
CATACCTTGTTGATAGCCAG+AGG 0.594509 3.2:+84407970 None:intergenic
AATGATGATAAGCCATGTAA+TGG 0.595373 3.2:+84409460 None:intergenic
GGCATTACCATTGCCGCCGG+TGG 0.595609 3.2:+84409525 None:intergenic
AGTGAATGCGGTGAAGGTGG+TGG 0.598487 3.2:+84409588 None:intergenic
AACTGGGCGACATTTAGCAC+AGG 0.599909 3.2:-84408271 MS.gene013003:CDS
CGGTCGGTATTGGGTTCCGA+TGG 0.600781 3.2:+84405290 None:intergenic
TGTTGGTGTCCTCCATACAT+GGG 0.602431 3.2:+84406492 None:intergenic
GCGGAGCGAGAAACGGCCGG+AGG 0.605699 3.2:+84405078 None:intergenic
ATGCTCTGGTCATAAGGATG+CGG 0.606205 3.2:+84406531 None:intergenic
AAAGCTTTGAATGAAATGAA+TGG 0.607445 3.2:-84408046 MS.gene013003:CDS
GAATGCGGTGAAGGTGGTGG+CGG 0.607461 3.2:+84409591 None:intergenic
TGCGGCATTACCATTGCCGC+CGG 0.608211 3.2:+84409522 None:intergenic
GCCGCCGGTGGATATTGCAT+CGG 0.610285 3.2:+84409537 None:intergenic
CCGGAGGGAGAAATGGCGGA+GGG 0.611023 3.2:+84405094 None:intergenic
AATGGCGGAGGGAGAAACGG+CGG 0.611260 3.2:+84405105 None:intergenic
ATCGGAACCCACTGGTGCGG+TGG 0.611576 3.2:+84409555 None:intergenic
GGTTCCGATGCAATATCCAC+CGG 0.612883 3.2:-84409541 MS.gene013003:CDS
ACCGGATAACCCGACCGAAG+CGG 0.614476 3.2:+84405389 None:intergenic
GAATCAGCATCAGATTGGCT+GGG 0.616222 3.2:+84407473 None:intergenic
GATCTTCAGCGGTAGCACTA+GGG 0.619503 3.2:+84407341 None:intergenic
ACTGTAAGTGAATGCGGTGA+AGG 0.629575 3.2:+84409582 None:intergenic
GGTTTGGAGATGATGGTGAA+AGG 0.630977 3.2:-84408072 MS.gene013003:CDS
ATAAGTGGTATATACTGGGT+CGG 0.631727 3.2:+84405270 None:intergenic
TGCATCGGAACCCACTGGTG+CGG 0.636482 3.2:+84409552 None:intergenic
AACAACAAAGTGAGAAAAGG+CGG 0.636747 3.2:+84405059 None:intergenic
TACACTAGAAGAACGATGTG+AGG 0.638483 3.2:+84405026 None:intergenic
AAATCCTCTGGCTATCAACA+AGG 0.639178 3.2:-84407974 MS.gene013003:intron
CGGTTCTGATTCGAAACCAA+CGG 0.648196 3.2:-84409649 MS.gene013003:CDS
GCTGCTTACCCCATGTATGG+AGG 0.652288 3.2:-84406501 MS.gene013003:CDS
GGTTTGGGCTGGTTAAGGAA+GGG 0.656466 3.2:-84405337 MS.gene013003:CDS
CTAGATCCATGATGCACGTG+AGG 0.657062 3.2:+84409423 None:intergenic
TAACTCCTCGATAAAATCGG+TGG 0.657283 3.2:+84406070 None:intergenic
GGTGGCGGCGGATAATGTTG+AGG 0.657751 3.2:+84409486 None:intergenic
GAATGGGCCAGCATATTATG+GGG 0.661679 3.2:-84406586 MS.gene013003:CDS
GTAAGTGAATGCGGTGAAGG+TGG 0.663508 3.2:+84409585 None:intergenic
TTGTGGAATTCACTTCACAT+GGG 0.663803 3.2:-84408363 MS.gene013003:CDS
TCCGATGCAATATCCACCGG+CGG 0.667743 3.2:-84409538 MS.gene013003:CDS
AGTTCCACCACCGCACCAGT+GGG 0.669547 3.2:-84409562 MS.gene013003:CDS
TAAGCAGACTTGTCAAACAG+AGG 0.678097 3.2:-84408395 MS.gene013003:CDS
TGGTTGTCTAAGATCTTCAG+CGG 0.682409 3.2:+84407330 None:intergenic
GGCGGCGGATAATGTTGAGG+CGG 0.682977 3.2:+84409489 None:intergenic
GTTGGTGTCCTCCATACATG+GGG 0.686565 3.2:+84406493 None:intergenic
TGAGGCGGTAACATATGATG+CGG 0.688591 3.2:+84409504 None:intergenic
CATGATGCACGTGAGGCACG+TGG 0.702148 3.2:+84409430 None:intergenic
AGCAGACTTGTCAAACAGAG+GGG 0.704079 3.2:-84408393 MS.gene013003:CDS
GGTGGAACTGTAAGTGAATG+CGG 0.709974 3.2:+84409576 None:intergenic
TAAGCCATGTAATGGTGTGG+TGG 0.713782 3.2:+84409468 None:intergenic
AATGGGCCAGCATATTATGG+GGG 0.716461 3.2:-84406585 MS.gene013003:CDS
TGATAAGCCATGTAATGGTG+TGG 0.730712 3.2:+84409465 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTTAATGTATCTAAAA+AGG - chr3.2:84409111-84409130 MS.gene013003:intron 10.0%
!! CAAAATCAAAATTAAAATAT+CGG + chr3.2:84408540-84408559 None:intergenic 10.0%
!! CATTAAATAATTTATGTATT+TGG + chr3.2:84409102-84409121 None:intergenic 10.0%
!!! AAACTAATATAATTTGATTT+TGG - chr3.2:84408890-84408909 MS.gene013003:intron 10.0%
!!! GTTATTTAAGTAAATTTTTT+GGG - chr3.2:84405595-84405614 MS.gene013003:intron 10.0%
!!! TGTTATTTAAGTAAATTTTT+TGG - chr3.2:84405594-84405613 MS.gene013003:intron 10.0%
!! ATCTAAAAAATTTAGATTTG+TGG - chr3.2:84408566-84408585 MS.gene013003:intron 15.0%
!! TAAAATATCATCACAAATTA+TGG + chr3.2:84408749-84408768 None:intergenic 15.0%
!!! ATAATTTATGTATTTGGTTT+CGG + chr3.2:84409096-84409115 None:intergenic 15.0%
!!! TTTAATTTGTTTCTTTATAC+AGG - chr3.2:84407173-84407192 MS.gene013003:intron 15.0%
!! AAATATAAGTGGTATATACT+GGG + chr3.2:84409425-84409444 None:intergenic 20.0%
!! AAATGTTGTGGTATTTATTT+AGG - chr3.2:84406142-84406161 MS.gene013003:intron 20.0%
!! ACAAAAAGAAAGAAAGAAAA+AGG + chr3.2:84405395-84405414 None:intergenic 20.0%
!! CAAAAAGAAAGAAAGAAAAA+GGG + chr3.2:84405394-84405413 None:intergenic 20.0%
!! GTTATTTGATTGTAAGTTTA+TGG - chr3.2:84405493-84405512 MS.gene013003:intron 20.0%
!! TAAAAAATTTAGATTTGTGG+AGG - chr3.2:84408569-84408588 MS.gene013003:intron 20.0%
!! TAAATACCACAACATTTATT+TGG + chr3.2:84406139-84406158 None:intergenic 20.0%
!! TAAATATAAGTGGTATATAC+TGG + chr3.2:84409426-84409445 None:intergenic 20.0%
!! TAAATGCATAGAGTAAAAAT+TGG + chr3.2:84407474-84407493 None:intergenic 20.0%
!! TTTAATCCAAATAAATGTTG+TGG - chr3.2:84406130-84406149 MS.gene013003:intron 20.0%
!!! AAAGTTGCTTTGTAAAATAA+AGG + chr3.2:84409193-84409212 None:intergenic 20.0%
!!! AAGTTGCTTTGTAAAATAAA+GGG + chr3.2:84409192-84409211 None:intergenic 20.0%
!!! TAAATGTATGCTTTGTTTTA+TGG - chr3.2:84406918-84406937 MS.gene013003:intron 20.0%
! AAAGAAAGAAAAAGGGAAAA+GGG + chr3.2:84405387-84405406 None:intergenic 25.0%
! AATGTGGTATACATTCAATT+CGG - chr3.2:84406796-84406815 MS.gene013003:intron 25.0%
! AGCATATGCAAATGTTAAAA+TGG + chr3.2:84407098-84407117 None:intergenic 25.0%
! ATAATCTCGATTGAATATCA+CGG + chr3.2:84406108-84406127 None:intergenic 25.0%
! CAAAAAACTATTAATGCACA+TGG + chr3.2:84405737-84405756 None:intergenic 25.0%
! CTACAAAAATAGAAAGATCA+GGG + chr3.2:84406467-84406486 None:intergenic 25.0%
! GATGCATTATAGATATTTGT+TGG - chr3.2:84407315-84407334 MS.gene013003:CDS 25.0%
! GATTGTAAGTTTATGGAAAA+TGG - chr3.2:84405500-84405519 MS.gene013003:intron 25.0%
! GCATTTATTATGAGATAACA+AGG - chr3.2:84407487-84407506 MS.gene013003:CDS 25.0%
! GTCAACTTTCTCTTATAAAT+AGG + chr3.2:84409033-84409052 None:intergenic 25.0%
! TAAAATTGTGATATTTCCTC+TGG - chr3.2:84408854-84408873 MS.gene013003:intron 25.0%
!! AATCTGTCACTAATTTTGTA+AGG - chr3.2:84407293-84407312 MS.gene013003:CDS 25.0%
!! AATTTGTTTCTTTATACAGG+AGG - chr3.2:84407176-84407195 MS.gene013003:intron 25.0%
!! AGAAAAAGTTTCAAGTAACA+TGG + chr3.2:84406517-84406536 None:intergenic 25.0%
!! AGAATTGAGTTTTCTCATTT+TGG - chr3.2:84406165-84406184 MS.gene013003:intron 25.0%
!! AGTTGCTTTGTAAAATAAAG+GGG + chr3.2:84409191-84409210 None:intergenic 25.0%
!! TTAAGCATGTATTTGAAACT+GGG - chr3.2:84405959-84405978 MS.gene013003:intron 25.0%
!! TTTAAGCATGTATTTGAAAC+TGG - chr3.2:84405958-84405977 MS.gene013003:intron 25.0%
!!! AAAGCTTTGAATGAAATGAA+TGG - chr3.2:84406642-84406661 MS.gene013003:intron 25.0%
!!! AATTTGATTTTGGCCAAAAT+TGG - chr3.2:84408900-84408919 MS.gene013003:intron 25.0%
!!! AGTTGAATTTTGATAACCTA+AGG - chr3.2:84408362-84408381 MS.gene013003:CDS 25.0%
!!! ATGAATTTTGAAAGCTTAGT+GGG - chr3.2:84405895-84405914 MS.gene013003:intron 25.0%
!!! ATTGCAATAATGTCACTTTT+TGG + chr3.2:84405837-84405856 None:intergenic 25.0%
!!! ATTTTTTCACCAAACAAATG+TGG + chr3.2:84405869-84405888 None:intergenic 25.0%
!!! CATGTGCATTAATAGTTTTT+TGG - chr3.2:84405735-84405754 MS.gene013003:intron 25.0%
!!! GCTTTGTTTTATGGTATAAT+TGG - chr3.2:84406927-84406946 MS.gene013003:intron 25.0%
!!! TATGAATTTTGAAAGCTTAG+TGG - chr3.2:84405894-84405913 MS.gene013003:intron 25.0%
!!! TATTTTTGTCGAGAAACTTA+TGG - chr3.2:84406873-84406892 MS.gene013003:intron 25.0%
!!! TCTCATTTTGGTAGTAAAAA+TGG - chr3.2:84406177-84406196 MS.gene013003:intron 25.0%
!!! TTGCAATAATGTCACTTTTT+GGG + chr3.2:84405836-84405855 None:intergenic 25.0%
AACAGATCGAATAAGTTACA+AGG + chr3.2:84408304-84408323 None:intergenic 30.0%
AAGGTCTCTATTGATCTATA+GGG - chr3.2:84407718-84407737 MS.gene013003:intron 30.0%
AATAGAATCCAAGTCACATT+TGG - chr3.2:84408685-84408704 MS.gene013003:intron 30.0%
AATCATTTGTTTAGACTCGT+AGG - chr3.2:84408406-84408425 MS.gene013003:CDS 30.0%
AATGATGATAAGCCATGTAA+TGG + chr3.2:84405231-84405250 None:intergenic 30.0%
ACAGATCGAATAAGTTACAA+GGG + chr3.2:84408303-84408322 None:intergenic 30.0%
AGACTAAACGAAAACAAACT+AGG + chr3.2:84408969-84408988 None:intergenic 30.0%
AGAGTGAAATTTCAGATATG+AGG + chr3.2:84406759-84406778 None:intergenic 30.0%
AGGAGAAATAAACAAGTGAA+TGG + chr3.2:84407030-84407049 None:intergenic 30.0%
ATAAGAAATGTGAAGAGACA+AGG + chr3.2:84408514-84408533 None:intergenic 30.0%
ATGAAGTTCATGGTATTACT+AGG + chr3.2:84407773-84407792 None:intergenic 30.0%
CATGTAGTAGAAAAGAAATG+TGG - chr3.2:84406780-84406799 MS.gene013003:intron 30.0%
CCTACAAAAATAGAAAGATC+AGG + chr3.2:84406468-84406487 None:intergenic 30.0%
CTTATTGCGAATAACCTTAA+TGG + chr3.2:84406277-84406296 None:intergenic 30.0%
CTTTCTCTTATAAATAGGAC+CGG + chr3.2:84409028-84409047 None:intergenic 30.0%
GAAAGAAAGAAAAAGGGAAA+AGG + chr3.2:84405388-84405407 None:intergenic 30.0%
GACTAAACGAAAACAAACTA+GGG + chr3.2:84408968-84408987 None:intergenic 30.0%
GAGAAATCACCATAAGAAAT+CGG + chr3.2:84406041-84406060 None:intergenic 30.0%
GGAAATTGTCTCTTGTAAAT+AGG - chr3.2:84409132-84409151 MS.gene013003:intron 30.0%
TAAAACCTACATGAAGTTCA+TGG + chr3.2:84407783-84407802 None:intergenic 30.0%
TAATACCATGAACTTCATGT+AGG - chr3.2:84407775-84407794 MS.gene013003:intron 30.0%
TAGCAGTTTAGATCTGAATT+CGG - chr3.2:84408070-84408089 MS.gene013003:CDS 30.0%
TGCTGATAATAAAACTCTCT+GGG - chr3.2:84405291-84405310 MS.gene013003:CDS 30.0%
TTCAAGCATAAACAAAGTAG+AGG + chr3.2:84408802-84408821 None:intergenic 30.0%
TTCTATCATAAGCATGTGTT+TGG + chr3.2:84406080-84406099 None:intergenic 30.0%
TTGCTTTGTAAAATAAAGGG+GGG + chr3.2:84409189-84409208 None:intergenic 30.0%
TTGTAACTCCTCGATAAAAT+CGG + chr3.2:84408624-84408643 None:intergenic 30.0%
TTGTAACTTATTCGATCTGT+TGG - chr3.2:84408303-84408322 MS.gene013003:CDS 30.0%
TTTAATTGCATGCAATCCAA+AGG - chr3.2:84408765-84408784 MS.gene013003:intron 30.0%
! ACGTATTAACCGATTTCTTA+TGG - chr3.2:84406029-84406048 MS.gene013003:CDS 30.0%
! ATAAACAAGTGAATGGATTC+AGG + chr3.2:84407023-84407042 None:intergenic 30.0%
! ATGAACTTCATGTAGGTTTT+AGG - chr3.2:84407782-84407801 MS.gene013003:intron 30.0%
! CTTTTTATGCCACATTTGTT+TGG - chr3.2:84405857-84405876 MS.gene013003:intron 30.0%
! GATAATTTTCATCCATCCAA+TGG + chr3.2:84405330-84405349 None:intergenic 30.0%
! GCATTATAGATATTTGTTGG+AGG - chr3.2:84407318-84407337 MS.gene013003:CDS 30.0%
! GTTGCTTTGTAAAATAAAGG+GGG + chr3.2:84409190-84409209 None:intergenic 30.0%
! GTTTTGTACAATTTGCAAAC+AGG - chr3.2:84407436-84407455 MS.gene013003:intron 30.0%
! TGTCGTTTCTACTTAAGATT+CGG - chr3.2:84405534-84405553 MS.gene013003:intron 30.0%
! TTTGCAGATTTTCTCCATTA+AGG - chr3.2:84406260-84406279 MS.gene013003:intron 30.0%
!! TGAATTTTGAAAGCTTAGTG+GGG - chr3.2:84405896-84405915 MS.gene013003:intron 30.0%
!!! AAAAAGTTCCCTTTTTTCTG+AGG + chr3.2:84405633-84405652 None:intergenic 30.0%
!!! AAAAGTTCCCTTTTTTCTGA+GGG + chr3.2:84405632-84405651 None:intergenic 30.0%
!!! CCTGATCTTTCTATTTTTGT+AGG - chr3.2:84406465-84406484 MS.gene013003:intron 30.0%
!!! TAGGTTTTAGGAGAAACAAA+AGG - chr3.2:84407794-84407813 MS.gene013003:intron 30.0%
AAATGTTTGCACTTCTGACA+TGG - chr3.2:84405774-84405793 MS.gene013003:intron 35.0%
AACAACAAAGTGAGAAAAGG+CGG + chr3.2:84409632-84409651 None:intergenic 35.0%
AAGCTAAATGGTACAACAGT+TGG - chr3.2:84407593-84407612 MS.gene013003:intron 35.0%
AATGTTTGCACTTCTGACAT+GGG - chr3.2:84405775-84405794 MS.gene013003:intron 35.0%
ACAATTACCTGCTTATTTGC+CGG + chr3.2:84407653-84407672 None:intergenic 35.0%
ACGGTTTCAAAAGAATGGTT+TGG - chr3.2:84409335-84409354 MS.gene013003:intron 35.0%
AGCATAAACAAAGTAGAGGA+AGG + chr3.2:84408798-84408817 None:intergenic 35.0%
AGGTCTCTATTGATCTATAG+GGG - chr3.2:84407719-84407738 MS.gene013003:intron 35.0%
ATAAGTGGTATATACTGGGT+CGG + chr3.2:84409421-84409440 None:intergenic 35.0%
ATAGACAGAATGAGACAATC+TGG + chr3.2:84407999-84408018 None:intergenic 35.0%
CAAATTATGGCTGTCACATA+TGG + chr3.2:84408736-84408755 None:intergenic 35.0%
CAAGGTCTCTATTGATCTAT+AGG - chr3.2:84407717-84407736 MS.gene013003:intron 35.0%
CGGTTTCAAAAGAATGGTTT+GGG - chr3.2:84409336-84409355 MS.gene013003:intron 35.0%
CTGCTGATAATAAAACTCTC+TGG - chr3.2:84405290-84405309 MS.gene013003:CDS 35.0%
GAATTCAGATCTAAACTGCT+AGG + chr3.2:84408071-84408090 None:intergenic 35.0%
GATAATAAAACTCTCTGGGT+CGG - chr3.2:84405295-84405314 MS.gene013003:CDS 35.0%
GGTATTACTAGGTGAGTTAT+TGG + chr3.2:84407762-84407781 None:intergenic 35.0%
GTAGATCATCAAAGTGAATG+AGG + chr3.2:84408826-84408845 None:intergenic 35.0%
GTGTTAACCCTCAGAAAAAA+GGG - chr3.2:84405622-84405641 MS.gene013003:intron 35.0%
GTTAAGATACCTGTTGGAAA+AGG - chr3.2:84407408-84407427 MS.gene013003:intron 35.0%
TAGATCAATAGAGACCTTGT+AGG + chr3.2:84407716-84407735 None:intergenic 35.0%
TATCCATAACCATCATAAGC+AGG + chr3.2:84408130-84408149 None:intergenic 35.0%
TCCTTATATTATACTCCCTC+TGG + chr3.2:84409159-84409178 None:intergenic 35.0%
TGGAACAACAAAGTGAGAAA+AGG + chr3.2:84409635-84409654 None:intergenic 35.0%
TGGTTGTTGAGATTCTCATT+TGG - chr3.2:84406197-84406216 MS.gene013003:intron 35.0%
TGTGTTAACCCTCAGAAAAA+AGG - chr3.2:84405621-84405640 MS.gene013003:intron 35.0%
TTGTAGAATCAGCATCAGAT+TGG + chr3.2:84407223-84407242 None:intergenic 35.0%
TTGTGGAATTCACTTCACAT+GGG - chr3.2:84406325-84406344 MS.gene013003:intron 35.0%
TTGTTCTCTACCTCATACTT+AGG - chr3.2:84407669-84407688 MS.gene013003:intron 35.0%
TTTGTGGAATTCACTTCACA+TGG - chr3.2:84406324-84406343 MS.gene013003:intron 35.0%
! AAAGTTTTGCAGACTTATGC+TGG - chr3.2:84406357-84406376 MS.gene013003:intron 35.0%
! AAGTTTTGCAGACTTATGCT+GGG - chr3.2:84406358-84406377 MS.gene013003:intron 35.0%
! ACCAGAGGGAGTATAATATA+AGG - chr3.2:84409155-84409174 MS.gene013003:intron 35.0%
! ACTTTAGCAGCTTTAACTGA+AGG + chr3.2:84406549-84406568 None:intergenic 35.0%
! AGATTCGGTTATGCTTCATT+TGG - chr3.2:84405549-84405568 MS.gene013003:intron 35.0%
! ATGTGACTTGGATTCTATTC+TGG + chr3.2:84408684-84408703 None:intergenic 35.0%
! CTTTAGCAGCTTTAACTGAA+GGG + chr3.2:84406548-84406567 None:intergenic 35.0%
! GATTCGGTTATGCTTCATTT+GGG - chr3.2:84405550-84405569 MS.gene013003:intron 35.0%
! GTTTCCTCATCAACCAATTT+TGG + chr3.2:84408916-84408935 None:intergenic 35.0%
! TTTGATAACCTAAGGTAGCA+CGG - chr3.2:84408370-84408389 MS.gene013003:CDS 35.0%
!! AGGAACTGAAACTTGTTGAT+TGG - chr3.2:84408436-84408455 MS.gene013003:intron 35.0%
!! CATTTGGGTTTCGTGTTTTT+GGG - chr3.2:84405565-84405584 MS.gene013003:intron 35.0%
!! CTATTCTGGAATTCTGCAAT+TGG + chr3.2:84408670-84408689 None:intergenic 35.0%
!! TCAGCATTATTTCTGCAGAT+AGG + chr3.2:84407560-84407579 None:intergenic 35.0%
!! TCATTTAGCTTACTTGCTGT+TGG + chr3.2:84408216-84408235 None:intergenic 35.0%
!! TCATTTGGGTTTCGTGTTTT+TGG - chr3.2:84405564-84405583 MS.gene013003:intron 35.0%
!!! AACCATTCTTTTGAAACCGT+TGG + chr3.2:84409335-84409354 None:intergenic 35.0%
!!! GTTGTTTTTGATGCCAATAC+CGG - chr3.2:84406567-84406586 MS.gene013003:CDS 35.0%
!!! GTTTTTGTGATCTTTGAGAC+AGG + chr3.2:84409540-84409559 None:intergenic 35.0%
AAACGATTGCCTTGCTCTTA+GGG - chr3.2:84409223-84409242 MS.gene013003:intron 40.0%
AAACGCTGTCGTATTTGCTT+TGG - chr3.2:84409491-84409510 MS.gene013003:CDS 40.0%
AAATCCTCTGGCTATCAACA+AGG - chr3.2:84406714-84406733 MS.gene013003:intron 40.0%
AACGCAGAAGCTTAATGTCT+CGG + chr3.2:84406008-84406027 None:intergenic 40.0%
AAGAGACAAGGAAAGCTCAA+TGG + chr3.2:84408502-84408521 None:intergenic 40.0%
AAGCAGACTTGTCAAACAGA+GGG - chr3.2:84406294-84406313 MS.gene013003:intron 40.0%
AATGTATGGGCCTAAGTATG+AGG + chr3.2:84407682-84407701 None:intergenic 40.0%
AGAGACTATCTCACCATACT+GGG + chr3.2:84407388-84407407 None:intergenic 40.0%
AGCAAACAGTTCGTCTTTCT+TGG - chr3.2:84407618-84407637 MS.gene013003:intron 40.0%
ATACCTGTTGGAAAAGGATG+TGG - chr3.2:84407414-84407433 MS.gene013003:intron 40.0%
CAAACAGTTCGTCTTTCTTG+GGG - chr3.2:84407620-84407639 MS.gene013003:intron 40.0%
CAAGTCACATTTGGTCTGAA+TGG - chr3.2:84408694-84408713 MS.gene013003:intron 40.0%
CATTCAGACCAAATGTGACT+TGG + chr3.2:84408696-84408715 None:intergenic 40.0%
CGAGATTGAAAACTGAAACG+AGG + chr3.2:84407050-84407069 None:intergenic 40.0%
CTCTTGTAAATAGGACCAGA+GGG - chr3.2:84409141-84409160 MS.gene013003:intron 40.0%
CTGGAACATCTCTAGTAGTT+GGG - chr3.2:84407144-84407163 MS.gene013003:intron 40.0%
GCAAACAGTTCGTCTTTCTT+GGG - chr3.2:84407619-84407638 MS.gene013003:intron 40.0%
GTCCAACGGTTTCAAAAGAA+TGG - chr3.2:84409330-84409349 MS.gene013003:intron 40.0%
GTCTCTGTTAAGATACCTGT+TGG - chr3.2:84407402-84407421 MS.gene013003:intron 40.0%
TAAACGATTGCCTTGCTCTT+AGG - chr3.2:84409222-84409241 MS.gene013003:intron 40.0%
TAACTCCTCGATAAAATCGG+TGG + chr3.2:84408621-84408640 None:intergenic 40.0%
TAAGCAGACTTGTCAAACAG+AGG - chr3.2:84406293-84406312 MS.gene013003:intron 40.0%
TACACTAGAAGAACGATGTG+AGG + chr3.2:84409665-84409684 None:intergenic 40.0%
TATACAGGAGGCCAATCAAA+CGG - chr3.2:84407188-84407207 MS.gene013003:intron 40.0%
TATTTCCTCTGGTGCATTCA+TGG - chr3.2:84408865-84408884 MS.gene013003:intron 40.0%
TCAATAGAGACCTTGTAGGA+TGG + chr3.2:84407712-84407731 None:intergenic 40.0%
TCACATTTGGTCTGAATGGA+AGG - chr3.2:84408698-84408717 MS.gene013003:intron 40.0%
TCTCTTGTAAATAGGACCAG+AGG - chr3.2:84409140-84409159 MS.gene013003:intron 40.0%
TGAAAACTGCATGGAAAGTC+TGG - chr3.2:84407125-84407144 MS.gene013003:intron 40.0%
TGAAGAATCCCTCCTAATTG+TGG - chr3.2:84408334-84408353 MS.gene013003:CDS 40.0%
TGATAAGCCATGTAATGGTG+TGG + chr3.2:84405226-84405245 None:intergenic 40.0%
TGGCTGTCACATATGGTTAT+TGG + chr3.2:84408729-84408748 None:intergenic 40.0%
TTAGACTCGTAGGAGTAATG+AGG - chr3.2:84408416-84408435 MS.gene013003:CDS 40.0%
TTAGTGGGGTGTATTGGAAT+GGG - chr3.2:84405910-84405929 MS.gene013003:intron 40.0%
TTCAACTCCACTCCACAATT+AGG + chr3.2:84408349-84408368 None:intergenic 40.0%
! AAACCACATCCTTTTCCAAC+AGG + chr3.2:84407420-84407439 None:intergenic 40.0%
! AGACTTTCCATGCAGTTTTC+AGG + chr3.2:84407126-84407145 None:intergenic 40.0%
! ATGGTGTTTTCTGTTCTAGC+AGG - chr3.2:84406661-84406680 MS.gene013003:intron 40.0%
! CTTTTCACCTGAAAACTGCA+TGG - chr3.2:84407116-84407135 MS.gene013003:CDS 40.0%
! GATTCTCATTTGGTTCGAGA+TGG - chr3.2:84406207-84406226 MS.gene013003:intron 40.0%
! GTTATTTCATTGCGCTACTC+AGG + chr3.2:84408946-84408965 None:intergenic 40.0%
! GTTTAAGGTTCAGTTGTTGC+AGG - chr3.2:84405797-84405816 MS.gene013003:intron 40.0%
! TAAGCATGTGTTTGGAACAG+CGG + chr3.2:84406072-84406091 None:intergenic 40.0%
! TCTGGAACATCTCTAGTAGT+TGG - chr3.2:84407143-84407162 MS.gene013003:intron 40.0%
! TCTGGAATTCTGCAATTGGT+AGG + chr3.2:84408666-84408685 None:intergenic 40.0%
! TGGTGTTTTCTGTTCTAGCA+GGG - chr3.2:84406662-84406681 MS.gene013003:intron 40.0%
! TGGTTGTCTAAGATCTTCAG+CGG + chr3.2:84407361-84407380 None:intergenic 40.0%
! TTCAAAAGAATGGTTTGGGC+TGG - chr3.2:84409340-84409359 MS.gene013003:intron 40.0%
! TTGGCCAAAATTGGTTGATG+AGG - chr3.2:84408909-84408928 MS.gene013003:intron 40.0%
! TTGTTATTACTCTGCTCCGT+TGG + chr3.2:84405058-84405077 None:intergenic 40.0%
!! GAAGCATTGCAGAAGCTAAA+TGG - chr3.2:84407581-84407600 MS.gene013003:intron 40.0%
AACTCCACTCCACAATTAGG+AGG + chr3.2:84408346-84408365 None:intergenic 45.0%
AAGCTTAATGTCTCGGGAAG+CGG + chr3.2:84406001-84406020 None:intergenic 45.0%
AATCCCTCCTAATTGTGGAG+TGG - chr3.2:84408339-84408358 MS.gene013003:CDS 45.0%
AATGGGCCAGCATATTATGG+GGG - chr3.2:84408103-84408122 MS.gene013003:CDS 45.0%
ACCATAACCCTTTGAACGTC+CGG + chr3.2:84406589-84406608 None:intergenic 45.0%
ACGCAGAAGCTTAATGTCTC+GGG + chr3.2:84406007-84406026 None:intergenic 45.0%
ACTCCACTCCACAATTAGGA+GGG + chr3.2:84408345-84408364 None:intergenic 45.0%
ACTGTAAGTGAATGCGGTGA+AGG + chr3.2:84405109-84405128 None:intergenic 45.0%
ACTTGTCAAACAGAGGGGTA+TGG - chr3.2:84406300-84406319 MS.gene013003:intron 45.0%
AGAATCAGCATCAGATTGGC+TGG + chr3.2:84407219-84407238 None:intergenic 45.0%
AGACAACCATTCTCCCAGTA+TGG - chr3.2:84407372-84407391 MS.gene013003:intron 45.0%
AGAGGAAGGAGAACAACCTT+TGG + chr3.2:84408784-84408803 None:intergenic 45.0%
AGCAGACTTGTCAAACAGAG+GGG - chr3.2:84406295-84406314 MS.gene013003:intron 45.0%
AGGATGGCCACACAAATGTA+TGG + chr3.2:84407696-84407715 None:intergenic 45.0%
ATAACCTAAGGTAGCACGGT+AGG - chr3.2:84408374-84408393 MS.gene013003:CDS 45.0%
ATAATATGCTGGCCCATTCC+AGG + chr3.2:84408101-84408120 None:intergenic 45.0%
ATCTCACCATACTGGGAGAA+TGG + chr3.2:84407381-84407400 None:intergenic 45.0%
ATGCTCTGGTCATAAGGATG+CGG + chr3.2:84408160-84408179 None:intergenic 45.0%
ATTTGTGTGGCCATCCTACA+AGG - chr3.2:84407699-84407718 MS.gene013003:intron 45.0%
CAAAGGGTTATGGTTTCGTC+AGG - chr3.2:84406595-84406614 MS.gene013003:CDS 45.0%
CAGAGACTATCTCACCATAC+TGG + chr3.2:84407389-84407408 None:intergenic 45.0%
CGAAAAGGTTGCTCTGTGTT+AGG + chr3.2:84406393-84406412 None:intergenic 45.0%
CGGAGCAGAGTAATAACAAC+AGG - chr3.2:84405059-84405078 MS.gene013003:CDS 45.0%
CTCTGGCTATCAACAAGGTA+TGG - chr3.2:84406719-84406738 MS.gene013003:intron 45.0%
CTTAGGCCCATACATTTGTG+TGG - chr3.2:84407686-84407705 MS.gene013003:intron 45.0%
CTTAGTGGGGTGTATTGGAA+TGG - chr3.2:84405909-84405928 MS.gene013003:intron 45.0%
GAAAGCTTAGTGGGGTGTAT+TGG - chr3.2:84405904-84405923 MS.gene013003:intron 45.0%
GAATGGGCCAGCATATTATG+GGG - chr3.2:84408102-84408121 MS.gene013003:CDS 45.0%
GCACTTCTGACATGGGTTTA+AGG - chr3.2:84405782-84405801 MS.gene013003:intron 45.0%
GCATACATGCTCTGGTCATA+AGG + chr3.2:84408166-84408185 None:intergenic 45.0%
GCTAGTGCAGGCATACTTAA+AGG + chr3.2:84408470-84408489 None:intergenic 45.0%
GGAATGGGCCAGCATATTAT+GGG - chr3.2:84408101-84408120 MS.gene013003:CDS 45.0%
GGACCTGCTTATGATGGTTA+TGG - chr3.2:84408124-84408143 MS.gene013003:CDS 45.0%
GGATGGCCACACAAATGTAT+GGG + chr3.2:84407695-84407714 None:intergenic 45.0%
GGTGGAACTGTAAGTGAATG+CGG + chr3.2:84405115-84405134 None:intergenic 45.0%
GGTTATGGTTTCGTCAGGTT+TGG - chr3.2:84406600-84406619 MS.gene013003:CDS 45.0%
GGTTCTCAATGACCTTGGAT+GGG + chr3.2:84408600-84408619 None:intergenic 45.0%
GTTCTCAATGACCTTGGATG+GGG + chr3.2:84408599-84408618 None:intergenic 45.0%
TAAGCCATGTAATGGTGTGG+TGG + chr3.2:84405223-84405242 None:intergenic 45.0%
TAAGGTTCAGTTGTTGCAGG+TGG - chr3.2:84405800-84405819 MS.gene013003:intron 45.0%
TAATATGCTGGCCCATTCCA+GGG + chr3.2:84408100-84408119 None:intergenic 45.0%
TGAGGCGGTAACATATGATG+CGG + chr3.2:84405187-84405206 None:intergenic 45.0%
TGATAGCCAGAGGATTTCCT+AGG + chr3.2:84406711-84406730 None:intergenic 45.0%
TGCTAAATGTCGCCCAGTTA+AGG + chr3.2:84406416-84406435 None:intergenic 45.0%
TGGAATGGGCCAGCATATTA+TGG - chr3.2:84408100-84408119 MS.gene013003:CDS 45.0%
TGGTTCTCAATGACCTTGGA+TGG + chr3.2:84408601-84408620 None:intergenic 45.0%
TTCGTCAGGTTTGGAGATGA+TGG - chr3.2:84406609-84406628 MS.gene013003:CDS 45.0%
TTTGACCATGAATGCACCAG+AGG + chr3.2:84408873-84408892 None:intergenic 45.0%
! AACAGAGGGGTATGGATTTG+TGG - chr3.2:84406308-84406327 MS.gene013003:intron 45.0%
! AGCAACCTTTTCGCCTTAAC+TGG - chr3.2:84406400-84406419 MS.gene013003:intron 45.0%
! CGGTTCTGATTCGAAACCAA+CGG - chr3.2:84405039-84405058 MS.gene013003:CDS 45.0%
! GAATCAGCATCAGATTGGCT+GGG + chr3.2:84407218-84407237 None:intergenic 45.0%
! GCAACCTTTTCGCCTTAACT+GGG - chr3.2:84406401-84406420 MS.gene013003:intron 45.0%
! GGTTTGGAGATGATGGTGAA+AGG - chr3.2:84406616-84406635 MS.gene013003:intron 45.0%
! GTTTGAGTTTAGTGGGCCAT+CGG - chr3.2:84409382-84409401 MS.gene013003:intron 45.0%
! TGTTGGTGTCCTCCATACAT+GGG + chr3.2:84408199-84408218 None:intergenic 45.0%
!! AGAATGGTTTGGGCTGGTTA+AGG - chr3.2:84409346-84409365 MS.gene013003:intron 45.0%
!! CATACCTTGTTGATAGCCAG+AGG + chr3.2:84406721-84406740 None:intergenic 45.0%
!! CGGTTCGGTTTGAGTTTAGT+GGG - chr3.2:84409375-84409394 MS.gene013003:intron 45.0%
!! TCGGTTCGGTTTGAGTTTAG+TGG - chr3.2:84409374-84409393 MS.gene013003:intron 45.0%
!! TGGTTGATGAGGAAACCTTC+TGG - chr3.2:84408920-84408939 MS.gene013003:intron 45.0%
!!! GAGAACCACCGATTTTATCG+AGG - chr3.2:84408613-84408632 MS.gene013003:intron 45.0%
!! TATATAATAATAAATATAAG+TGG + chr3.2:84409436-84409455 None:intergenic 5.0%
AACTCCTACCGTGCTACCTT+AGG + chr3.2:84408381-84408400 None:intergenic 50.0%
AACTGGGCGACATTTAGCAC+AGG - chr3.2:84406417-84406436 MS.gene013003:intron 50.0%
AAGCAGCAGCATACATGCTC+TGG + chr3.2:84408174-84408193 None:intergenic 50.0%
AATTCGGCAGTCCCTGGAAT+GGG - chr3.2:84408086-84408105 MS.gene013003:CDS 50.0%
ACCCTTTGAACGTCCGGTAT+TGG + chr3.2:84406583-84406602 None:intergenic 50.0%
ACCGGACGTTCAAAGGGTTA+TGG - chr3.2:84406585-84406604 MS.gene013003:CDS 50.0%
AGAAAAGGCGGAGCGAGAAA+CGG + chr3.2:84409620-84409639 None:intergenic 50.0%
AGATCTTCAGCGGTAGCACT+AGG + chr3.2:84407351-84407370 None:intergenic 50.0%
ATACTGGGTCGGTCGGTATT+GGG + chr3.2:84409410-84409429 None:intergenic 50.0%
CCTGCTTATTTGCCGGATTG+CGG + chr3.2:84407646-84407665 None:intergenic 50.0%
CTAGATCCATGATGCACGTG+AGG + chr3.2:84405268-84405287 None:intergenic 50.0%
GAACGATGTGAGGAGAGATC+TGG + chr3.2:84409655-84409674 None:intergenic 50.0%
GACAAGGAAAGCTCAATGGC+AGG + chr3.2:84408498-84408517 None:intergenic 50.0%
GATATTGCATCGGAACCCAC+TGG + chr3.2:84405144-84405163 None:intergenic 50.0%
GATCTTCAGCGGTAGCACTA+GGG + chr3.2:84407350-84407369 None:intergenic 50.0%
GCAACTCCTAGGAAATCCTC+TGG - chr3.2:84406702-84406721 MS.gene013003:intron 50.0%
GCCAATACCGGACGTTCAAA+GGG - chr3.2:84406579-84406598 MS.gene013003:CDS 50.0%
GGTTCCGATGCAATATCCAC+CGG - chr3.2:84405147-84405166 MS.gene013003:intron 50.0%
GTAAGTGAATGCGGTGAAGG+TGG + chr3.2:84405106-84405125 None:intergenic 50.0%
GTCGGGTTATCCGGTTAAAG+CGG - chr3.2:84409307-84409326 MS.gene013003:intron 50.0%
GTGGTATATACTGGGTCGGT+CGG + chr3.2:84409417-84409436 None:intergenic 50.0%
TATACTGGGTCGGTCGGTAT+TGG + chr3.2:84409411-84409430 None:intergenic 50.0%
TATGGGGGACCTGCTTATGA+TGG - chr3.2:84408118-84408137 MS.gene013003:CDS 50.0%
TCGGGTTATCCGGTTAAAGC+GGG - chr3.2:84409308-84409327 MS.gene013003:intron 50.0%
TCGGTGGTTCTCAATGACCT+TGG + chr3.2:84408605-84408624 None:intergenic 50.0%
TCTAGCAGGGCAATGCGAAT+TGG - chr3.2:84406675-84406694 MS.gene013003:intron 50.0%
TGCCAATACCGGACGTTCAA+AGG - chr3.2:84406578-84406597 MS.gene013003:CDS 50.0%
TGGACAAGAAACAGCCAACC+CGG - chr3.2:84409247-84409266 MS.gene013003:intron 50.0%
TGGTTAAGGAAGGGTCGGTT+CGG - chr3.2:84409360-84409379 MS.gene013003:intron 50.0%
! AGAAATGGCGGAGGGAGAAA+CGG + chr3.2:84409589-84409608 None:intergenic 50.0%
! CGGTGATTTGCACCATTGGA+TGG - chr3.2:84405315-84405334 MS.gene013003:CDS 50.0%
! CTGTTGGTGTCCTCCATACA+TGG + chr3.2:84408200-84408219 None:intergenic 50.0%
! GTTGGTGTCCTCCATACATG+GGG + chr3.2:84408198-84408217 None:intergenic 50.0%
!! GAATTGGTGCTGCAACTCCT+AGG - chr3.2:84406691-84406710 MS.gene013003:intron 50.0%
!! GGTTTGGGCTGGTTAAGGAA+GGG - chr3.2:84409351-84409370 MS.gene013003:intron 50.0%
!! TGGTTTGGGCTGGTTAAGGA+AGG - chr3.2:84409350-84409369 MS.gene013003:intron 50.0%
AAAAGGGAAAACCTCGCCGG+TGG + chr3.2:84405371-84405390 None:intergenic 55.0%
ACCGTTGGACCCGCTTTAAC+CGG + chr3.2:84409320-84409339 None:intergenic 55.0%
AGTGAATGCGGTGAAGGTGG+TGG + chr3.2:84405103-84405122 None:intergenic 55.0%
ATAACCCGACCGAAGCGGTT+CGG + chr3.2:84409297-84409316 None:intergenic 55.0%
ATTGCGCTACTCAGGCCAGA+AGG + chr3.2:84408938-84408957 None:intergenic 55.0%
CCGCAATCCGGCAAATAAGC+AGG - chr3.2:84407643-84407662 MS.gene013003:intron 55.0%
CTTGTCCAGCCCTAAGAGCA+AGG + chr3.2:84409235-84409254 None:intergenic 55.0%
GAATTCGGCAGTCCCTGGAA+TGG - chr3.2:84408085-84408104 MS.gene013003:CDS 55.0%
GATCTGAATTCGGCAGTCCC+TGG - chr3.2:84408080-84408099 MS.gene013003:CDS 55.0%
GATTGCCTTGCTCTTAGGGC+TGG - chr3.2:84409227-84409246 MS.gene013003:intron 55.0%
GCAGGTCCCCCATAATATGC+TGG + chr3.2:84408112-84408131 None:intergenic 55.0%
GCCATGTAATGGTGTGGTGG+CGG + chr3.2:84405220-84405239 None:intergenic 55.0%
GCTGCTTACCCCATGTATGG+AGG - chr3.2:84408187-84408206 MS.gene013003:CDS 55.0%
GGGAAAAGGGAAAACCTCGC+CGG + chr3.2:84405374-84405393 None:intergenic 55.0%
GTCGCCCAGTTAAGGCGAAA+AGG + chr3.2:84406408-84406427 None:intergenic 55.0%
TCCGATGCAATATCCACCGG+CGG - chr3.2:84405150-84405169 MS.gene013003:intron 55.0%
TCCGGTTAAAGCGGGTCCAA+CGG - chr3.2:84409316-84409335 MS.gene013003:intron 55.0%
TCTTTCTTGGGGCCGCAATC+CGG - chr3.2:84407631-84407650 MS.gene013003:intron 55.0%
TGGCAGGCAATAGCTAGTGC+AGG + chr3.2:84408482-84408501 None:intergenic 55.0%
TGTCTCGGGAAGCGGAGAAA+TGG + chr3.2:84405993-84406012 None:intergenic 55.0%
! CACCGTTGTTTCGCTTCCAC+CGG - chr3.2:84405352-84405371 MS.gene013003:CDS 55.0%
! GCTGCTGCTTACCCCATGTA+TGG - chr3.2:84408184-84408203 MS.gene013003:CDS 55.0%
! GGGTCGGTGATTTGCACCAT+TGG - chr3.2:84405311-84405330 MS.gene013003:CDS 55.0%
!! ATGTAATGGTGTGGTGGCGG+CGG + chr3.2:84405217-84405236 None:intergenic 55.0%
!! CTTAGCGGGTTGGGCAGTTT+GGG + chr3.2:84409273-84409292 None:intergenic 55.0%
!! TGGGCTGGTTAAGGAAGGGT+CGG - chr3.2:84409355-84409374 MS.gene013003:intron 55.0%
!!! GGTGGCGGAGTTTTCTGTTG+CGG + chr3.2:84405085-84405104 None:intergenic 55.0%
ACCGCTTCGGTCGGGTTATC+CGG - chr3.2:84409298-84409317 MS.gene013003:intron 60.0%
ACCGGATAACCCGACCGAAG+CGG + chr3.2:84409302-84409321 None:intergenic 60.0%
AGAAACGGCGGAGGGAGAAG+CGG + chr3.2:84409574-84409593 None:intergenic 60.0%
AGGGAGAAGCGGCGGCTATT+AGG + chr3.2:84409563-84409582 None:intergenic 60.0%
AGTTCCACCACCGCACCAGT+GGG - chr3.2:84405126-84405145 MS.gene013003:CDS 60.0%
CACGTGCCTCACGTGCATCA+TGG - chr3.2:84405259-84405278 MS.gene013003:intron 60.0%
CAGCGGTAGCACTAGGGTCA+AGG + chr3.2:84407344-84407363 None:intergenic 60.0%
CATGATGCACGTGAGGCACG+TGG + chr3.2:84405261-84405280 None:intergenic 60.0%
CGCCGGTGGAAGCGAAACAA+CGG + chr3.2:84405357-84405376 None:intergenic 60.0%
CGGTGGAAGCGAAACAACGG+TGG + chr3.2:84405354-84405373 None:intergenic 60.0%
GAAACGGCCGGAGGGAGAAA+TGG + chr3.2:84409604-84409623 None:intergenic 60.0%
GCAATATCCACCGGCGGCAA+TGG - chr3.2:84405156-84405175 MS.gene013003:intron 60.0%
GCCGCCACCACACCATTACA+TGG - chr3.2:84405216-84405235 MS.gene013003:intron 60.0%
GCCGCCGGTGGATATTGCAT+CGG + chr3.2:84405154-84405173 None:intergenic 60.0%
GGCGGCGGATAATGTTGAGG+CGG + chr3.2:84405202-84405221 None:intergenic 60.0%
GGGAGAAGCGGCGGCTATTA+GGG + chr3.2:84409562-84409581 None:intergenic 60.0%
TAACCCGACCGAAGCGGTTC+GGG + chr3.2:84409296-84409315 None:intergenic 60.0%
TAAGCCCGAACCGCTTCGGT+CGG - chr3.2:84409289-84409308 MS.gene013003:intron 60.0%
TGCATCGGAACCCACTGGTG+CGG + chr3.2:84405139-84405158 None:intergenic 60.0%
TGCGGCATTACCATTGCCGC+CGG + chr3.2:84405169-84405188 None:intergenic 60.0%
TTGTTTCGCTTCCACCGGCG+AGG - chr3.2:84405357-84405376 MS.gene013003:CDS 60.0%
! AATGGCGGAGGGAGAAACGG+CGG + chr3.2:84409586-84409605 None:intergenic 60.0%
! CGGTCGGTATTGGGTTCCGA+TGG + chr3.2:84409401-84409420 None:intergenic 60.0%
! GAATGCGGTGAAGGTGGTGG+CGG + chr3.2:84405100-84405119 None:intergenic 60.0%
! GGTGGCGGCGGATAATGTTG+AGG + chr3.2:84405205-84405224 None:intergenic 60.0%
!! GCTTAGCGGGTTGGGCAGTT+TGG + chr3.2:84409274-84409293 None:intergenic 60.0%
!! GGCTGGGTGTGCCGTTTGAT+TGG + chr3.2:84407202-84407221 None:intergenic 60.0%
AAGCCCGAACCGCTTCGGTC+GGG - chr3.2:84409290-84409309 MS.gene013003:intron 65.0%
AAGGCGGAGCGAGAAACGGC+CGG + chr3.2:84409616-84409635 None:intergenic 65.0%
ACGGCCGGAGGGAGAAATGG+CGG + chr3.2:84409601-84409620 None:intergenic 65.0%
ATCGGAACCCACTGGTGCGG+TGG + chr3.2:84405136-84405155 None:intergenic 65.0%
CAGTTCCACCACCGCACCAG+TGG - chr3.2:84405125-84405144 MS.gene013003:CDS 65.0%
CCCTCCGCCATTTCTCCCTC+CGG - chr3.2:84409594-84409613 MS.gene013003:CDS 65.0%
CCGCTAAGCCCGAACCGCTT+CGG - chr3.2:84409285-84409304 MS.gene013003:intron 65.0%
GGCATTACCATTGCCGCCGG+TGG + chr3.2:84405166-84405185 None:intergenic 65.0%
TTGGGCAGTTTGGGCCGGGT+TGG + chr3.2:84409264-84409283 None:intergenic 65.0%
! CCGAAGCGGTTCGGGCTTAG+CGG + chr3.2:84409288-84409307 None:intergenic 65.0%
! CCGGAGGGAGAAATGGCGGA+GGG + chr3.2:84409597-84409616 None:intergenic 65.0%
! CGAAGCGGTTCGGGCTTAGC+GGG + chr3.2:84409287-84409306 None:intergenic 65.0%
! GTGGAGGCACACCCCATCCA+AGG - chr3.2:84408585-84408604 MS.gene013003:intron 65.0%
!! CGGTTCGGGCTTAGCGGGTT+GGG + chr3.2:84409282-84409301 None:intergenic 65.0%
AACGGCGGAGGGAGAAGCGG+CGG + chr3.2:84409571-84409590 None:intergenic 70.0%
CGGAGCGAGAAACGGCCGGA+GGG + chr3.2:84409612-84409631 None:intergenic 70.0%
GCCGGAGGGAGAAATGGCGG+AGG + chr3.2:84409598-84409617 None:intergenic 70.0%
GCGGAGGGAGAAACGGCGGA+GGG + chr3.2:84409582-84409601 None:intergenic 70.0%
GGAACCCACTGGTGCGGTGG+TGG + chr3.2:84405133-84405152 None:intergenic 70.0%
! CGGGTTGGGCAGTTTGGGCC+GGG + chr3.2:84409268-84409287 None:intergenic 70.0%
! GCGGTTCGGGCTTAGCGGGT+TGG + chr3.2:84409283-84409302 None:intergenic 70.0%
!! GCGGGTTGGGCAGTTTGGGC+CGG + chr3.2:84409269-84409288 None:intergenic 70.0%
GCGGAGCGAGAAACGGCCGG+AGG + chr3.2:84409613-84409632 None:intergenic 75.0%
GGCGGAGGGAGAAACGGCGG+AGG + chr3.2:84409583-84409602 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 84405025 84409685 84405025 ID=MS.gene013003
chr3.2 mRNA 84405025 84409685 84405025 ID=MS.gene013003.t1;Parent=MS.gene013003
chr3.2 exon 84409398 84409685 84409398 ID=MS.gene013003.t1.exon1;Parent=MS.gene013003.t1
chr3.2 CDS 84409398 84409685 84409398 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84407975 84408443 84407975 ID=MS.gene013003.t1.exon2;Parent=MS.gene013003.t1
chr3.2 CDS 84407975 84408443 84407975 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84407460 84407515 84407460 ID=MS.gene013003.t1.exon3;Parent=MS.gene013003.t1
chr3.2 CDS 84407460 84407515 84407460 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84407253 84407383 84407253 ID=MS.gene013003.t1.exon4;Parent=MS.gene013003.t1
chr3.2 CDS 84407253 84407383 84407253 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84407046 84407142 84407046 ID=MS.gene013003.t1.exon5;Parent=MS.gene013003.t1
chr3.2 CDS 84407046 84407142 84407046 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84406488 84406634 84406488 ID=MS.gene013003.t1.exon6;Parent=MS.gene013003.t1
chr3.2 CDS 84406488 84406634 84406488 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84405991 84406103 84405991 ID=MS.gene013003.t1.exon7;Parent=MS.gene013003.t1
chr3.2 CDS 84405991 84406103 84405991 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84405285 84405466 84405285 ID=MS.gene013003.t1.exon8;Parent=MS.gene013003.t1
chr3.2 CDS 84405285 84405466 84405285 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
chr3.2 exon 84405025 84405161 84405025 ID=MS.gene013003.t1.exon9;Parent=MS.gene013003.t1
chr3.2 CDS 84405025 84405161 84405025 ID=cds.MS.gene013003.t1;Parent=MS.gene013003.t1
Gene Sequence

>MS.gene013003

ATGCAATCAACAAACGGTTCTGATTCGAAACCAACGGAGCAGAGTAATAACAACAGGCCGCAACAGAAAACTCCGCCACCACCTTCACCGCATTCACTTACAGTTCCACCACCGCACCAGTGGGTTCCGATGCAATATCCACCGGCGGCAATGGTAATGCCGCATCATATGTTACCGCCTCAACATTATCCGCCGCCACCACACCATTACATGGCTTATCATCATTATCTTCACCACGTGCCTCACGTGCATCATGGATCTAGTGCTGCTGATAATAAAACTCTCTGGGTCGGTGATTTGCACCATTGGATGGATGAAAATTATCTCCACCGTTGTTTCGCTTCCACCGGCGAGGTTTTCCCTTTTCCCTTTTTCTTTCTTTCTTTTTGTTTTTTCGTTAGTGATTTTATTTATGAACATTAAATCGTATTTTTATGTTTTGTTACTTTTATGTTTTCTGATATCAATGTTATTTGATTGTAAGTTTATGGAAAATGGATATTACAGTTTGTCGTTTCTACTTAAGATTCGGTTATGCTTCATTTGGGTTTCGTGTTTTTGGGTTTTTTTGTTATTTAAGTAAATTTTTTGGGTTTTGTGTTAACCCTCAGAAAAAAGGGAACTTTTTTTTTTTTTACTAATTGTGTATGTAGTTATAGTACAATTGTTAAATCAAGTTTAAAGATTAGTAATTGAAAAGATATTAAAGCCATGTGCATTAATAGTTTTTTGGATTAAAGAGAAGATCGAAATGTTTGCACTTCTGACATGGGTTTAAGGTTCAGTTGTTGCAGGTGGCTAGATTTAACCCAAAAAGTGACATTATTGCAATCTTTTTATGCCACATTTGTTTGGTGAAAAAATAGTACTATGAATTTTGAAAGCTTAGTGGGGTGTATTGGAATGGGATTTTAAAGCATTTTAAAAGAGTTTTTTAAGCATGTATTTGAAACTGGGTTTGCAAACCATTTCTCCGCTTCCCGAGACATTAAGCTTCTGCGTTGACGTATTAACCGATTTCTTATGGTGATTTCTCAAAATATGCCGCTGTTCCAAACACATGCTTATGATAGAAAATTACCGTGATATTCAATCGAGATTATTATTTAATCCAAATAAATGTTGTGGTATTTATTTAGGAGAATTGAGTTTTCTCATTTTGGTAGTAAAAATGGTTGTTGAGATTCTCATTTGGTTCGAGATGGATAAACTTTTGCATCTAATTGACATGCATTTTTGCAGATTTTCTCCATTAAGGTTATTCGCAATAAGCAGACTTGTCAAACAGAGGGGTATGGATTTGTGGAATTCACTTCACATGGGACAGCTGAGAAAGTTTTGCAGACTTATGCTGGGATGTTGATGCCTAACACAGAGCAACCTTTTCGCCTTAACTGGGCGACATTTAGCACAGGAGATCACAAACGCTCAGATAATGTCCCTGATCTTTCTATTTTTGTAGGAGATTTAGCTGCAGATGTTACAGATACCATGTTACTTGAAACTTTTTCTGATAAATACCCTTCAGTTAAAGCTGCTAAAGTTGTTTTTGATGCCAATACCGGACGTTCAAAGGGTTATGGTTTCGTCAGGTTTGGAGATGATGGTGAAAGGTCTAAAGCTTTGAATGAAATGAATGGTGTTTTCTGTTCTAGCAGGGCAATGCGAATTGGTGCTGCAACTCCTAGGAAATCCTCTGGCTATCAACAAGGTATGGCAACTTATATAGCGCCTCATATCTGAAATTTCACTCTTCATGTAGTAGAAAAGAAATGTGGTATACATTCAATTCGGAGACAAACAATTTTAGATATTTTTTTATGCTCAAATTGTATTTGTTCTGCTTTGTATTTTTGTCGAGAAACTTATGGAATTGCATTTTTATTGCTCATATAAATGTATGCTTTGTTTTATGGTATAATTGGCGATATCAATTTTGTTAATAAAATGTTATTTGTTTCTAATTAGCAGACAAGTAGTAAATTCATAGAATTTCCTGAATCCATTCACTTGTTTATTTCTCCTCGTTTCAGTTTTCAATCTCGTGTAGTTATTTTTTTTAATGTCTCTCCATTTTAACATTTGCATATGCTTTTCACCTGAAAACTGCATGGAAAGTCTGGAACATCTCTAGTAGTTGGGTATTGATTTAATTTGTTTCTTTATACAGGAGGCCAATCAAACGGCACACCCAGCCAATCTGATGCTGATTCTACAAATACAACTGTTAGTTTTTCAGCTTTTTATTAATTTTTTTTTAGAGAAGTTAATCTGTCACTAATTTTGTAAGGATGCATTATAGATATTTGTTGGAGGCCTTGACCCTAGTGCTACCGCTGAAGATCTTAGACAACCATTCTCCCAGTATGGTGAGATAGTCTCTGTTAAGATACCTGTTGGAAAAGGATGTGGTTTTGTACAATTTGCAAACAGGTAAAATTTATATCCAATTTTTACTCTATGCATTTATTATGAGATAACAAGGTTTTTACTACACTCGCAATGTGTTCACTAATTAATCATTCTAAACAACCTATCTGCAGAAATAATGCTGAAGAAGCATTGCAGAAGCTAAATGGTACAACAGTTGGCAAGCAAACAGTTCGTCTTTCTTGGGGCCGCAATCCGGCAAATAAGCAGGTAATTGTTCTCTACCTCATACTTAGGCCCATACATTTGTGTGGCCATCCTACAAGGTCTCTATTGATCTATAGGGGCAAGTGTAATTTAATGACCAATAACTCACCTAGTAATACCATGAACTTCATGTAGGTTTTAGGAGAAACAAAAGGTCTATTTGTTCTCAGCTGCTAAATTTAATGAAGTGTAGTTTAATGCAGTCATTATATGATTTTTTTTGCTTAATTCGAATCAATCAAATTTTGTTCATGATTATTTTGTTCATTAATGAATTTTCACATTCAAATGAAGACTCTAAGAATAACTATTGATGAGTATAGCTCATTGAATACCAGATTGTCTCATTCTGTCTATCATTGATTGCATTTTGCAATTGTTCTATGTCAATTGACACATCTCTTTGCCTAGCAGTTTAGATCTGAATTCGGCAGTCCCTGGAATGGGCCAGCATATTATGGGGGACCTGCTTATGATGGTTATGGATATGCTATGCCGCATCCTTATGACCAGAGCATGTATGCTGCTGCTTACCCCATGTATGGAGGACACCAACAGCAAGTAAGCTAAATGAAAGTGCACTGCAGAAGTAATACTCACAACAGCATCATGTTTGAATGAGAAAAATTAACTTTTCTCCCTTGTAACTTATTCGATCTGTTGGTTGTATTCTGAAGAATCCCTCCTAATTGTGGAGTGGAGTTGAATTTTGATAACCTAAGGTAGCACGGTAGGAGTTCAATTAATCATTTGTTTAGACTCGTAGGAGTAATGAGGAACTGAAACTTGTTGATTGGAATAATTACCTTTAAGTATGCCTGCACTAGCTATTGCCTGCCATTGAGCTTTCCTTGTCTCTTCACATTTCTTATATGCCGATATTTTAATTTTGATTTTGATTTCAATCTAAAAAATTTAGATTTGTGGAGGCACACCCCATCCAAGGTCATTGAGAACCACCGATTTTATCGAGGAGTTACAATAGAATTTATATATAATAACCTACCAATTGCAGAATTCCAGAATAGAATCCAAGTCACATTTGGTCTGAATGGAAGGTCTAACCAATAACCATATGTGACAGCCATAATTTGTGATGATATTTTAATTGCATGCAATCCAAAGGTTGTTCTCCTTCCTCTACTTTGTTTATGCTTGAAGCCTCATTCACTTTGATGATCTACATGATCTTTAAAATTGTGATATTTCCTCTGGTGCATTCATGGTCAAACTAATATAATTTGATTTTGGCCAAAATTGGTTGATGAGGAAACCTTCTGGCCTGAGTAGCGCAATGAAATAACCCTAGTTTGTTTTCGTTTAGTCTGTAATTGACTTCTTACTACGTAATATACTACTCCCTCCGGTCCTATTTATAAGAGAAAGTTGACTTTTTAGATACATTGAATAATGTATGTATCTAGTAAAGAACCGAAACCAAATACATAAATTATTTAATGTATCTAAAAAGGAAATTGTCTCTTGTAAATAGGACCAGAGGGAGTATAATATAAGGATTTTGAACCCCCCTTTATTTTACAAAGCAACTTTGTACTAAATTAAACGATTGCCTTGCTCTTAGGGCTGGACAAGAAACAGCCAACCCGGCCCAAACTGCCCAACCCGCTAAGCCCGAACCGCTTCGGTCGGGTTATCCGGTTAAAGCGGGTCCAACGGTTTCAAAAGAATGGTTTGGGCTGGTTAAGGAAGGGTCGGTTCGGTTTGAGTTTAGTGGGCCATCGGAACCCAATACCGACCGACCCAGTATATACCACTTATATTTATTATTATATATAAATAAATCAAAATAGAAAGAATGAAAATGAATGAAACGCTGTCGTATTTGCTTTGGTATATATACTTCTCAACTCACTTCCTGTCTCAAAGATCACAAAAACCCTAATAGCCGCCGCTTCTCCCTCCGCCGTTTCTCCCTCCGCCATTTCTCCCTCCGGCCGTTTCTCGCTCCGCCTTTTCTCACTTTGTTGTTCCAGATCTCTCCTCACATCGTTCTTCTAGTGTAA
Protein sequence

>MS.gene013003.t1

MQSTNGSDSKPTEQSNNNRPQQKTPPPPSPHSLTVPPPHQWVPMQYPPAAMVMPHHMLPPQHYPPPPHHYMAYHHYLHHVPHVHHGSSAADNKTLWIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQTYAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAMRIGAATPRKSSGYQQGGQSNGTPSQSDADSTNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQFRSEFGSPWNGPAYYGGPAYDGYGYAMPHPYDQSMYAAAYPMYGGHQQQVIENHRFYRGVTIEFIYNNLPIAEFQNRIQVTFGLNGRAGQETANPAQTAQPAKPEPLRSGYPVKAGPTVSKEWFGLVKEGSVRFEFSGPSEPNTDRPNHKNPNSRRFSLRRFSLRHFSLRPFLAPPFLTLLFQISPHIVLLV