Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026355.t1 | XP_013466742.1 | 95.7 | 372 | 16 | 0 | 1 | 372 | 67 | 438 | 8.80E-203 | 716.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026355.t1 | Q9M3B4 | 55.0 | 378 | 152 | 6 | 1 | 370 | 69 | 436 | 4.0e-111 | 402.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026355.t1 | A0A072VH71 | 95.7 | 372 | 16 | 0 | 1 | 372 | 67 | 438 | 6.3e-203 | 716.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026355 | MS.gene64891 | PPI |
| MS.gene066499 | MS.gene026355 | PPI |
| MS.gene026355 | MS.gene86544 | PPI |
| MS.gene026355 | MS.gene002713 | PPI |
| MS.gene85555 | MS.gene026355 | PPI |
| MS.gene026355 | MS.gene53503 | PPI |
| MS.gene47936 | MS.gene026355 | PPI |
| MS.gene05830 | MS.gene026355 | PPI |
| MS.gene026355 | MS.gene52951 | PPI |
| MS.gene026355 | MS.gene27974 | PPI |
| MS.gene026355 | MS.gene65332 | PPI |
| MS.gene96258 | MS.gene026355 | PPI |
| MS.gene026355 | MS.gene030899 | PPI |
| MS.gene99555 | MS.gene026355 | PPI |
| MS.gene026355 | MS.gene07384 | PPI |
| MS.gene23814 | MS.gene026355 | PPI |
| MS.gene026355 | MS.gene69969 | PPI |
| MS.gene026355 | MS.gene004394 | PPI |
| MS.gene72659 | MS.gene026355 | PPI |
| MS.gene004849 | MS.gene026355 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026355.t1 | MTR_1g034785 | 95.699 | 372 | 16 | 0 | 1 | 372 | 67 | 438 | 0.0 | 740 |
| MS.gene026355.t1 | MTR_7g016970 | 71.314 | 373 | 103 | 3 | 1 | 371 | 70 | 440 | 0.0 | 545 |
| MS.gene026355.t1 | MTR_4g103760 | 35.540 | 287 | 167 | 6 | 1 | 282 | 77 | 350 | 4.54e-52 | 180 |
| MS.gene026355.t1 | MTR_8g054430 | 27.202 | 386 | 213 | 13 | 11 | 379 | 78 | 412 | 9.38e-29 | 116 |
| MS.gene026355.t1 | MTR_4g119620 | 27.039 | 233 | 144 | 6 | 11 | 239 | 79 | 289 | 4.76e-17 | 81.6 |
| MS.gene026355.t1 | MTR_4g119620 | 23.469 | 196 | 135 | 4 | 50 | 244 | 25 | 206 | 2.05e-12 | 67.8 |
| MS.gene026355.t1 | MTR_1g072140 | 25.322 | 233 | 150 | 6 | 10 | 239 | 69 | 280 | 6.04e-16 | 78.2 |
| MS.gene026355.t1 | MTR_7g076230 | 29.907 | 214 | 123 | 6 | 19 | 228 | 335 | 525 | 2.01e-14 | 75.5 |
| MS.gene026355.t1 | MTR_4g007500 | 28.090 | 178 | 115 | 4 | 47 | 223 | 193 | 358 | 1.80e-13 | 71.2 |
| MS.gene026355.t1 | MTR_2g034500 | 28.502 | 207 | 116 | 11 | 39 | 229 | 228 | 418 | 1.95e-13 | 72.4 |
| MS.gene026355.t1 | MTR_2g436510 | 22.523 | 222 | 147 | 7 | 11 | 231 | 213 | 410 | 3.92e-13 | 70.9 |
| MS.gene026355.t1 | MTR_4g104380 | 22.727 | 220 | 148 | 4 | 20 | 239 | 240 | 437 | 5.00e-13 | 70.9 |
| MS.gene026355.t1 | MTR_1g054300 | 26.449 | 276 | 136 | 12 | 16 | 248 | 167 | 418 | 8.24e-13 | 70.1 |
| MS.gene026355.t1 | MTR_1g087120 | 27.442 | 215 | 121 | 9 | 39 | 233 | 313 | 512 | 4.27e-12 | 68.6 |
| MS.gene026355.t1 | MTR_1g021590 | 30.631 | 222 | 119 | 11 | 48 | 260 | 215 | 410 | 8.77e-12 | 66.6 |
| MS.gene026355.t1 | MTR_1g072740 | 25.397 | 189 | 115 | 5 | 43 | 227 | 284 | 450 | 1.04e-11 | 66.6 |
| MS.gene026355.t1 | MTR_4g102520 | 25.397 | 189 | 115 | 5 | 43 | 227 | 285 | 451 | 1.60e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026355.t1 | AT3G49180 | 55.409 | 379 | 149 | 7 | 1 | 370 | 69 | 436 | 1.39e-144 | 417 |
| MS.gene026355.t1 | AT4G02730 | 24.561 | 285 | 166 | 9 | 12 | 258 | 45 | 318 | 8.27e-15 | 75.1 |
| MS.gene026355.t1 | AT2G47410 | 26.695 | 236 | 131 | 9 | 39 | 252 | 41 | 256 | 5.13e-14 | 74.3 |
| MS.gene026355.t1 | AT2G47410 | 26.695 | 236 | 131 | 9 | 39 | 252 | 41 | 256 | 5.13e-14 | 74.3 |
| MS.gene026355.t1 | AT2G47410 | 28.761 | 226 | 129 | 10 | 39 | 252 | 41 | 246 | 6.02e-14 | 74.3 |
| MS.gene026355.t1 | AT2G47410 | 26.695 | 236 | 131 | 9 | 39 | 252 | 223 | 438 | 6.83e-14 | 73.9 |
| MS.gene026355.t1 | AT2G47410 | 28.761 | 226 | 129 | 10 | 39 | 252 | 222 | 427 | 8.23e-14 | 73.9 |
| MS.gene026355.t1 | AT2G47410 | 28.761 | 226 | 129 | 10 | 39 | 252 | 223 | 428 | 8.30e-14 | 73.9 |
| MS.gene026355.t1 | AT4G15900 | 22.072 | 222 | 148 | 7 | 11 | 231 | 219 | 416 | 4.84e-13 | 70.9 |
| MS.gene026355.t1 | AT3G49660 | 22.727 | 242 | 157 | 8 | 13 | 248 | 74 | 291 | 7.12e-13 | 69.3 |
| MS.gene026355.t1 | AT3G49660 | 25.893 | 224 | 124 | 8 | 19 | 230 | 122 | 315 | 7.31e-11 | 63.2 |
| MS.gene026355.t1 | AT1G15440 | 27.381 | 252 | 151 | 8 | 19 | 265 | 315 | 539 | 1.24e-12 | 70.1 |
| MS.gene026355.t1 | AT1G15440 | 27.381 | 252 | 151 | 8 | 19 | 265 | 355 | 579 | 1.50e-12 | 69.7 |
| MS.gene026355.t1 | AT3G50390 | 33.155 | 187 | 87 | 8 | 51 | 227 | 210 | 368 | 5.40e-12 | 67.4 |
| MS.gene026355.t1 | AT1G24130 | 28.342 | 187 | 106 | 8 | 48 | 227 | 188 | 353 | 2.14e-11 | 65.5 |
| MS.gene026355.t1 | AT5G50230 | 22.936 | 218 | 145 | 5 | 22 | 239 | 238 | 432 | 3.12e-11 | 65.1 |
| MS.gene026355.t1 | AT3G18130 | 25.108 | 231 | 145 | 7 | 13 | 239 | 66 | 272 | 5.46e-11 | 63.5 |
| MS.gene026355.t1 | AT1G48630 | 20.233 | 257 | 162 | 6 | 13 | 227 | 66 | 321 | 5.56e-11 | 63.5 |
Find 82 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGGAATTTGTTAATTTC+TGG | 0.180820 | 1.4:+19834064 | MS.gene026355:CDS |
| ATCACCACTGCTGATAATTA+TGG | 0.225976 | 1.4:+19833866 | MS.gene026355:CDS |
| TATGAGAACTTGCACGAATT+TGG | 0.227639 | 1.4:+19835783 | MS.gene026355:CDS |
| TAATCACATTAAGGAGCTTC+AGG | 0.315950 | 1.4:+19835387 | MS.gene026355:CDS |
| CGTAAAGATTCTTTCCTTCC+CGG | 0.318491 | 1.4:-19833120 | None:intergenic |
| CTTGCACGAATTTGGTATAA+AGG | 0.332053 | 1.4:+19835791 | MS.gene026355:CDS |
| GTGGGAATTTGTTAATTTCT+GGG | 0.342559 | 1.4:+19834065 | MS.gene026355:CDS |
| TGTGATATCTAATCACATTA+AGG | 0.353822 | 1.4:+19835378 | MS.gene026355:CDS |
| ACAACAAGAATATTAGTTAT+AGG | 0.359437 | 1.4:-19835172 | None:intergenic |
| GATGACTCACTGCTGATATC+TGG | 0.365366 | 1.4:+19832694 | MS.gene026355:CDS |
| CTGGTTGGTGGAGCTTTGTC+TGG | 0.366416 | 1.4:+19831588 | MS.gene026355:CDS |
| ATTTGGTATAAAGGAGCTAT+TGG | 0.374097 | 1.4:+19835800 | MS.gene026355:CDS |
| TAGCCATCTCCATTGTCCTT+TGG | 0.382041 | 1.4:-19835743 | None:intergenic |
| ACAATGGCATTAATTATTGA+TGG | 0.388339 | 1.4:-19833764 | None:intergenic |
| AGGATGGAATAGTTCGTGTT+TGG | 0.400519 | 1.4:+19834092 | MS.gene026355:CDS |
| ATTATTTGTAAGGTTGAAAC+TGG | 0.404070 | 1.4:+19832610 | MS.gene026355:intron |
| TAATCACCAAGGCACCTATC+TGG | 0.412253 | 1.4:+19831569 | MS.gene026355:CDS |
| AAGATGGATATGTAAGAGTT+TGG | 0.419112 | 1.4:+19832722 | MS.gene026355:CDS |
| AATAATTAATGCCATTGTCT+TGG | 0.429313 | 1.4:+19833769 | MS.gene026355:CDS |
| GTCTGGTGATATATACTTGT+GGG | 0.439916 | 1.4:+19831605 | MS.gene026355:CDS |
| CTGATATCTGGTTCTGAAGA+TGG | 0.441099 | 1.4:+19832706 | MS.gene026355:CDS |
| CGCATGTTTAAACATGCTAA+AGG | 0.445611 | 1.4:+19834139 | MS.gene026355:CDS |
| TTAGAAGATGTACGATTGCT+TGG | 0.449877 | 1.4:-19835211 | None:intergenic |
| TCACCACTGCTGATAATTAT+GGG | 0.454338 | 1.4:+19833867 | MS.gene026355:CDS |
| GTCTTATTTACTCCCTCCAT+TGG | 0.455842 | 1.4:+19835261 | MS.gene026355:CDS |
| CTGGCAGATTGCTTAAGAAA+TGG | 0.457303 | 1.4:+19832629 | MS.gene026355:CDS |
| AGAAATGGCATGCTCATTTG+AGG | 0.457810 | 1.4:+19832644 | MS.gene026355:CDS |
| TTTGAGGGCCGTCACTTGCC+TGG | 0.460055 | 1.4:+19832660 | MS.gene026355:CDS |
| CTCCATCTCGATTTCAGAAG+CGG | 0.478651 | 1.4:-19835703 | None:intergenic |
| CTATCAACCTAGGTGATAGC+AGG | 0.478817 | 1.4:+19835323 | MS.gene026355:CDS |
| TTAATTTCTGGGTCTGAGGA+TGG | 0.480417 | 1.4:+19834076 | MS.gene026355:CDS |
| TAGAAGATGTACGATTGCTT+GGG | 0.483277 | 1.4:-19835210 | None:intergenic |
| CAAAGCTCCACCAACCAGAT+AGG | 0.485937 | 1.4:-19831583 | None:intergenic |
| CACCAACCAGATAGGTGCCT+TGG | 0.508118 | 1.4:-19831575 | None:intergenic |
| GAAATGGCATGCTCATTTGA+GGG | 0.512057 | 1.4:+19832645 | MS.gene026355:CDS |
| ACTGATGTTGTGATTGGTAA+TGG | 0.514197 | 1.4:+19833175 | MS.gene026355:CDS |
| GCCTTGGTGATTAGCAGCAA+GGG | 0.514559 | 1.4:-19831559 | None:intergenic |
| CAATGGCATTAATTATTGAT+GGG | 0.515934 | 1.4:-19833763 | None:intergenic |
| CGCGTAACTGATGTTGTGAT+TGG | 0.519045 | 1.4:+19833169 | MS.gene026355:CDS |
| AGGTGATAGCAGGGGATGCA+TGG | 0.521018 | 1.4:+19835333 | MS.gene026355:CDS |
| TTATTTGTCATCTTCATCGA+AGG | 0.524621 | 1.4:-19835841 | None:intergenic |
| TGTCTGGTGATATATACTTG+TGG | 0.528205 | 1.4:+19831604 | MS.gene026355:CDS |
| TTTGTTAATTTCTGGGTCTG+AGG | 0.529152 | 1.4:+19834072 | MS.gene026355:CDS |
| ATCAGACGATCGGATGTGTA+AGG | 0.530244 | 1.4:+19833225 | MS.gene026355:CDS |
| TATTTGATGATTTGAGAAGC+CGG | 0.531299 | 1.4:+19833101 | MS.gene026355:CDS |
| GCATAAAACACATGTTCAGC+TGG | 0.534177 | 1.4:-19833794 | None:intergenic |
| CAAGGCACCTATCTGGTTGG+TGG | 0.539654 | 1.4:+19831576 | MS.gene026355:CDS |
| TAGTTTCAGCATCAGACGAT+CGG | 0.546669 | 1.4:+19833215 | MS.gene026355:CDS |
| TGCCTTGGTGATTAGCAGCA+AGG | 0.552304 | 1.4:-19831560 | None:intergenic |
| AATTATGGGACGCATATCAC+TGG | 0.553424 | 1.4:+19833881 | MS.gene026355:CDS |
| CCTTGGTGATTAGCAGCAAG+GGG | 0.561309 | 1.4:-19831558 | None:intergenic |
| TGCTTAGCATACAGCAAAGG+TGG | 0.561396 | 1.4:+19834046 | MS.gene026355:CDS |
| CACCAAGGCACCTATCTGGT+TGG | 0.562182 | 1.4:+19831573 | MS.gene026355:CDS |
| ATTTGATGATTTGAGAAGCC+GGG | 0.571886 | 1.4:+19833102 | MS.gene026355:CDS |
| AGAAAATACCAGGCAAGTGA+CGG | 0.572365 | 1.4:-19832668 | None:intergenic |
| GGTATAAAGGAGCTATTGGA+TGG | 0.575688 | 1.4:+19835804 | MS.gene026355:CDS |
| AACTAAAGCACGAGTACCAA+AGG | 0.577418 | 1.4:+19835727 | MS.gene026355:CDS |
| AGGGGCTTGATAGCTTCAGC+AGG | 0.579647 | 1.4:-19831540 | None:intergenic |
| CACAACATCAGTTACGCGCA+TGG | 0.580262 | 1.4:-19833164 | None:intergenic |
| GATGATTTGAGAAGCCGGGA+AGG | 0.588382 | 1.4:+19833106 | MS.gene026355:CDS |
| CAATGGAGATGGCTAACCAA+TGG | 0.599592 | 1.4:+19835751 | MS.gene026355:CDS |
| AGTCATCATCAGAAAATACC+AGG | 0.602655 | 1.4:-19832678 | None:intergenic |
| TCATCTATTTCTCAGCAACA+AGG | 0.603240 | 1.4:+19835672 | MS.gene026355:intron |
| TTAAAGACTGCTATCAACCT+AGG | 0.603770 | 1.4:+19835313 | MS.gene026355:CDS |
| CGCCGCTTCTGAAATCGAGA+TGG | 0.614970 | 1.4:+19835701 | MS.gene026355:CDS |
| GTACCAAAGGACAATGGAGA+TGG | 0.632040 | 1.4:+19835740 | MS.gene026355:CDS |
| TGCATCCCCTGCTATCACCT+AGG | 0.634465 | 1.4:-19835330 | None:intergenic |
| CGTCCCATAATTATCAGCAG+TGG | 0.642151 | 1.4:-19833870 | None:intergenic |
| GCTTAGCATACAGCAAAGGT+GGG | 0.643763 | 1.4:+19834047 | MS.gene026355:CDS |
| GCACGAGTACCAAAGGACAA+TGG | 0.644048 | 1.4:+19835734 | MS.gene026355:CDS |
| TATCAACCTAGGTGATAGCA+GGG | 0.648083 | 1.4:+19835324 | MS.gene026355:CDS |
| GATGTTGTGATTGGTAATGG+AGG | 0.655310 | 1.4:+19833178 | MS.gene026355:CDS |
| ACTTGCTTAGCATACAGCAA+AGG | 0.656508 | 1.4:+19834043 | MS.gene026355:CDS |
| CCCCTTGCTGCTAATCACCA+AGG | 0.657112 | 1.4:+19831558 | MS.gene026355:CDS |
| TTCAGCTGGATCCAAGACAA+TGG | 0.658383 | 1.4:-19833780 | None:intergenic |
| AAGCTCTTAACTTCAACTTG+CGG | 0.660819 | 1.4:-19831516 | None:intergenic |
| ATAAAGGAGCTATTGGATGG+TGG | 0.682514 | 1.4:+19835807 | MS.gene026355:CDS |
| TAGGTATGGAGCTTAGCGAG+AGG | 0.689292 | 1.4:+19833716 | MS.gene026355:intron |
| CATCTCGATTTCAGAAGCGG+CGG | 0.696583 | 1.4:-19835700 | None:intergenic |
| ATGTTGTGATTGGTAATGGA+GGG | 0.698348 | 1.4:+19833179 | MS.gene026355:CDS |
| TGGTGATATATACTTGTGGG+AGG | 0.702132 | 1.4:+19831608 | MS.gene026355:CDS |
| ATCAACCTAGGTGATAGCAG+GGG | 0.734418 | 1.4:+19835325 | MS.gene026355:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAAAAAAGAAAAATA+AGG | + | chr1.4:19832453-19832472 | MS.gene026355:intron | 10.0% |
| !! | ATTGTCTAATCAAAATTAAA+TGG | - | chr1.4:19834765-19834784 | None:intergenic | 15.0% |
| !! | TATTATAGTTTATTCTTAGA+TGG | + | chr1.4:19835077-19835096 | MS.gene026355:intron | 15.0% |
| !! | TTAATTTCTATGCTTATATA+TGG | + | chr1.4:19835051-19835070 | MS.gene026355:intron | 15.0% |
| !! | TTTAGAAAAATAGTAATCAA+TGG | + | chr1.4:19833278-19833297 | MS.gene026355:intron | 15.0% |
| !!! | AAATTTTCAAATAGTATAGA+TGG | - | chr1.4:19833339-19833358 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTCCTTTTATTT+TGG | + | chr1.4:19833005-19833024 | MS.gene026355:intron | 15.0% |
| !!! | CTTTTTTTTCCTTTTATTTT+GGG | + | chr1.4:19833006-19833025 | MS.gene026355:intron | 15.0% |
| !!! | TGATTTATTTTCTTTTTTCT+AGG | + | chr1.4:19833697-19833716 | MS.gene026355:intron | 15.0% |
| !!! | TTGAAAATTTTAGTCATTTA+TGG | + | chr1.4:19833349-19833368 | MS.gene026355:intron | 15.0% |
| !!! | TTTCTTTTTTTTAGTTATTG+AGG | - | chr1.4:19832449-19832468 | None:intergenic | 15.0% |
| !! | AAAAACTATGTATTGAAAGT+GGG | + | chr1.4:19832544-19832563 | MS.gene026355:intron | 20.0% |
| !! | ACAACAAGAATATTAGTTAT+AGG | - | chr1.4:19835175-19835194 | None:intergenic | 20.0% |
| !! | AGTGATAACTAACAATTAAT+GGG | + | chr1.4:19834362-19834381 | MS.gene026355:intron | 20.0% |
| !! | ATTAAGTAGTTTATCTAAAC+AGG | - | chr1.4:19831768-19831787 | None:intergenic | 20.0% |
| !! | CACATGAAAATTGTAAAAAA+TGG | - | chr1.4:19835568-19835587 | None:intergenic | 20.0% |
| !! | GTATATTATCCCAAAATAAA+AGG | - | chr1.4:19833018-19833037 | None:intergenic | 20.0% |
| !! | GTCACAATTAAATTAGTTAA+TGG | - | chr1.4:19835639-19835658 | None:intergenic | 20.0% |
| !! | TAAAAAAGACTGATAACTAT+AGG | - | chr1.4:19835430-19835449 | None:intergenic | 20.0% |
| !! | TTAAGTAGTTTATCTAAACA+GGG | - | chr1.4:19831767-19831786 | None:intergenic | 20.0% |
| !!! | AATCATTTAGAGTATATTGA+AGG | - | chr1.4:19835010-19835029 | None:intergenic | 20.0% |
| !!! | ATGTTGATTATTATAAGTCA+GGG | - | chr1.4:19834568-19834587 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTTCTTCCCATT+TGG | + | chr1.4:19833979-19833998 | MS.gene026355:intron | 20.0% |
| !!! | TATGATTGGATGTAAAATTT+TGG | - | chr1.4:19832495-19832514 | None:intergenic | 20.0% |
| !!! | TATTTTCTTTTTTCTAGGTA+TGG | + | chr1.4:19833702-19833721 | MS.gene026355:intron | 20.0% |
| !!! | TTTAGATCAAGAGTTTTAAA+CGG | + | chr1.4:19831720-19831739 | MS.gene026355:intron | 20.0% |
| ! | AAAAATTAGAGGACATCAAA+AGG | - | chr1.4:19833967-19833986 | None:intergenic | 25.0% |
| ! | AAAATGTTCAATCTGAATGT+TGG | - | chr1.4:19835487-19835506 | None:intergenic | 25.0% |
| ! | AATAATTAATGCCATTGTCT+TGG | + | chr1.4:19833769-19833788 | MS.gene026355:CDS | 25.0% |
| ! | AATAGCTATGTTGTTAGTAA+CGG | + | chr1.4:19831908-19831927 | MS.gene026355:intron | 25.0% |
| ! | ACAATGGCATTAATTATTGA+TGG | - | chr1.4:19833767-19833786 | None:intergenic | 25.0% |
| ! | ATGAACAAATTACTATTGTC+TGG | - | chr1.4:19833564-19833583 | None:intergenic | 25.0% |
| ! | ATGGGAAGAAAAAAAATTAG+AGG | - | chr1.4:19833978-19833997 | None:intergenic | 25.0% |
| ! | ATTATTTGTAAGGTTGAAAC+TGG | + | chr1.4:19832610-19832629 | MS.gene026355:intron | 25.0% |
| ! | CAATGGCATTAATTATTGAT+GGG | - | chr1.4:19833766-19833785 | None:intergenic | 25.0% |
| ! | GAAAAACTATGTATTGAAAG+TGG | + | chr1.4:19832543-19832562 | MS.gene026355:intron | 25.0% |
| ! | GAGTGATAACTAACAATTAA+TGG | + | chr1.4:19834361-19834380 | MS.gene026355:intron | 25.0% |
| ! | GGAATGTTTATTCAACTTAA+TGG | + | chr1.4:19831670-19831689 | MS.gene026355:intron | 25.0% |
| ! | GGCATAAACTTAATGAAATA+TGG | + | chr1.4:19834165-19834184 | MS.gene026355:intron | 25.0% |
| ! | TAACAATTGAACTTAACAGT+GGG | - | chr1.4:19834628-19834647 | None:intergenic | 25.0% |
| ! | TAATGACTGAACTTAACAAA+GGG | + | chr1.4:19834865-19834884 | MS.gene026355:intron | 25.0% |
| ! | TCAACAGTAAAGATAGTTTA+TGG | - | chr1.4:19832091-19832110 | None:intergenic | 25.0% |
| ! | TGTGATATCTAATCACATTA+AGG | + | chr1.4:19835378-19835397 | MS.gene026355:CDS | 25.0% |
| !! | ATGACCTAAGTCTATATTTT+GGG | + | chr1.4:19832302-19832321 | MS.gene026355:intron | 25.0% |
| !! | ATTGGATGTAAAATTTTGGA+GGG | - | chr1.4:19832491-19832510 | None:intergenic | 25.0% |
| !! | CATGTTGATTATTATAAGTC+AGG | - | chr1.4:19834569-19834588 | None:intergenic | 25.0% |
| !! | GAATTTGCATATTTTTCCAA+TGG | - | chr1.4:19835280-19835299 | None:intergenic | 25.0% |
| !! | TCTTTACGAGTATAGTTTTT+CGG | + | chr1.4:19833135-19833154 | MS.gene026355:CDS | 25.0% |
| !!! | CTTTTCAGGTATTTGATAAT+TGG | + | chr1.4:19832748-19832767 | MS.gene026355:intron | 25.0% |
| !!! | TTAGATCAAGAGTTTTAAAC+GGG | + | chr1.4:19831721-19831740 | MS.gene026355:intron | 25.0% |
| AAAAACCCTATTCCTTCATT+TGG | + | chr1.4:19832146-19832165 | MS.gene026355:intron | 30.0% | |
| AAAGGAAAAGTTCATGACAT+AGG | - | chr1.4:19834292-19834311 | None:intergenic | 30.0% | |
| AACAAAGGGAGCTTATTAAA+TGG | + | chr1.4:19834879-19834898 | MS.gene026355:intron | 30.0% | |
| AAGATGGATATGTAAGAGTT+TGG | + | chr1.4:19832722-19832741 | MS.gene026355:CDS | 30.0% | |
| AAGCATCCACAAAAAAACAT+GGG | + | chr1.4:19835239-19835258 | MS.gene026355:CDS | 30.0% | |
| AATGAAATATGGCATACTCT+TGG | + | chr1.4:19834176-19834195 | MS.gene026355:intron | 30.0% | |
| ACTGACATACATATGAATAC+CGG | - | chr1.4:19835603-19835622 | None:intergenic | 30.0% | |
| AGTAGTTAACATTGAAGAAG+AGG | + | chr1.4:19832169-19832188 | MS.gene026355:intron | 30.0% | |
| AGTTGCATGCATTATTTGTA+AGG | + | chr1.4:19832600-19832619 | MS.gene026355:intron | 30.0% | |
| ATATAGACTTAGGTCATGTT+TGG | - | chr1.4:19832299-19832318 | None:intergenic | 30.0% | |
| ATGTATTGAAAGTGGGAAAT+TGG | + | chr1.4:19832551-19832570 | MS.gene026355:intron | 30.0% | |
| ATGTTAACTACTCCAAATGA+AGG | - | chr1.4:19832161-19832180 | None:intergenic | 30.0% | |
| ATTTGGTATAAAGGAGCTAT+TGG | + | chr1.4:19835800-19835819 | MS.gene026355:CDS | 30.0% | |
| CATACAAGCTTTACTAAACA+TGG | - | chr1.4:19834243-19834262 | None:intergenic | 30.0% | |
| CTAACAATTGAACTTAACAG+TGG | - | chr1.4:19834629-19834648 | None:intergenic | 30.0% | |
| CTAATACCGCAAAAAGTTTA+GGG | - | chr1.4:19832518-19832537 | None:intergenic | 30.0% | |
| CTAATGACTGAACTTAACAA+AGG | + | chr1.4:19834864-19834883 | MS.gene026355:intron | 30.0% | |
| GAGAAATAGTCTATTCACTT+GGG | - | chr1.4:19834519-19834538 | None:intergenic | 30.0% | |
| GATAACTAACAATTAATGGG+TGG | + | chr1.4:19834365-19834384 | MS.gene026355:intron | 30.0% | |
| GTAGTTAACATTGAAGAAGA+GGG | + | chr1.4:19832170-19832189 | MS.gene026355:intron | 30.0% | |
| TATTGACATGTTACGATTTC+AGG | - | chr1.4:19834597-19834616 | None:intergenic | 30.0% | |
| TCAGAGATTCTAATTTGACA+AGG | - | chr1.4:19834337-19834356 | None:intergenic | 30.0% | |
| TCCATTATGTAATTTCCCTA+TGG | + | chr1.4:19834476-19834495 | MS.gene026355:intron | 30.0% | |
| TCTAAACAAACTTACACTTC+AGG | - | chr1.4:19831706-19831725 | None:intergenic | 30.0% | |
| TGAGAAATAGTCTATTCACT+TGG | - | chr1.4:19834520-19834539 | None:intergenic | 30.0% | |
| TGATTAGACAATTTCATCTC+TGG | + | chr1.4:19834773-19834792 | MS.gene026355:intron | 30.0% | |
| TGTTAAGTTCAGTCATTAGA+GGG | - | chr1.4:19834863-19834882 | None:intergenic | 30.0% | |
| TTAGTATGAAGATGCCAAAT+GGG | - | chr1.4:19833996-19834015 | None:intergenic | 30.0% | |
| TTATTTGTCATCTTCATCGA+AGG | - | chr1.4:19835844-19835863 | None:intergenic | 30.0% | |
| TTCTTACATGTTAATCTCTC+TGG | + | chr1.4:19835138-19835157 | MS.gene026355:intron | 30.0% | |
| TTGTTAAGTTCAGTCATTAG+AGG | - | chr1.4:19834864-19834883 | None:intergenic | 30.0% | |
| ! | AAGCATTTGTAAGACTGTTT+TGG | - | chr1.4:19832245-19832264 | None:intergenic | 30.0% |
| ! | ACTATCAATGCTAACCATTT+TGG | + | chr1.4:19833047-19833066 | MS.gene026355:intron | 30.0% |
| ! | AGGTCAATATGTTTAAGATC+TGG | - | chr1.4:19833947-19833966 | None:intergenic | 30.0% |
| ! | ATCATACCCTAAACTTTTTG+CGG | + | chr1.4:19832509-19832528 | MS.gene026355:intron | 30.0% |
| ! | CAAAAAGTTTAGGGTATGAT+TGG | - | chr1.4:19832509-19832528 | None:intergenic | 30.0% |
| ! | CATGACCTAAGTCTATATTT+TGG | + | chr1.4:19832301-19832320 | MS.gene026355:intron | 30.0% |
| ! | CTATCAATGCTAACCATTTT+GGG | + | chr1.4:19833048-19833067 | MS.gene026355:intron | 30.0% |
| ! | GATTGGATGTAAAATTTTGG+AGG | - | chr1.4:19832492-19832511 | None:intergenic | 30.0% |
| ! | TAAGAAATGCATGCTTTAGA+AGG | - | chr1.4:19835124-19835143 | None:intergenic | 30.0% |
| ! | TATTTGATGATTTGAGAAGC+CGG | + | chr1.4:19833101-19833120 | MS.gene026355:CDS | 30.0% |
| ! | TCTCATACATTTTCTTCCAT+TGG | - | chr1.4:19835770-19835789 | None:intergenic | 30.0% |
| ! | TGACCTAAGTCTATATTTTG+GGG | + | chr1.4:19832303-19832322 | MS.gene026355:intron | 30.0% |
| ! | TTGCATATTTTTCCAATGGA+GGG | - | chr1.4:19835276-19835295 | None:intergenic | 30.0% |
| ! | TTTGCATATTTTTCCAATGG+AGG | - | chr1.4:19835277-19835296 | None:intergenic | 30.0% |
| !! | ATGAAAGTGTTTCCAAATAG+CGG | + | chr1.4:19832880-19832899 | MS.gene026355:intron | 30.0% |
| !! | CTTGATGCTTGGATTTTAAT+GGG | + | chr1.4:19831649-19831668 | MS.gene026355:intron | 30.0% |
| !! | GTGGGAATTTGTTAATTTCT+GGG | + | chr1.4:19834065-19834084 | MS.gene026355:CDS | 30.0% |
| !!! | ATAAGACCCATGTTTTTTTG+TGG | - | chr1.4:19835248-19835267 | None:intergenic | 30.0% |
| AAAAAATGCCGTTATCGCAA+TGG | + | chr1.4:19831932-19831951 | MS.gene026355:intron | 35.0% | |
| AAAAATGCCGTTATCGCAAT+GGG | + | chr1.4:19831933-19831952 | MS.gene026355:intron | 35.0% | |
| AAATCATACAAACAACAGCC+AGG | - | chr1.4:19833649-19833668 | None:intergenic | 35.0% | |
| AAATCATGAATCCTAGCCAT+AGG | - | chr1.4:19834495-19834514 | None:intergenic | 35.0% | |
| AAGCTCTTAACTTCAACTTG+CGG | - | chr1.4:19831519-19831538 | None:intergenic | 35.0% | |
| AATCATGAATCCTAGCCATA+GGG | - | chr1.4:19834494-19834513 | None:intergenic | 35.0% | |
| ACAACTTGAGCATTAGGAAA+AGG | - | chr1.4:19834310-19834329 | None:intergenic | 35.0% | |
| ACACCCCAAAATATAGACTT+AGG | - | chr1.4:19832309-19832328 | None:intergenic | 35.0% | |
| ACTACTCCAAATGAAGGAAT+AGG | - | chr1.4:19832155-19832174 | None:intergenic | 35.0% | |
| ACTGATGTTGTGATTGGTAA+TGG | + | chr1.4:19833175-19833194 | MS.gene026355:CDS | 35.0% | |
| AGACTGATAACTATAGGTCA+CGG | - | chr1.4:19835424-19835443 | None:intergenic | 35.0% | |
| AGTCATCATCAGAAAATACC+AGG | - | chr1.4:19832681-19832700 | None:intergenic | 35.0% | |
| ATCACCACTGCTGATAATTA+TGG | + | chr1.4:19833866-19833885 | MS.gene026355:CDS | 35.0% | |
| ATTCATATGTATGTCAGTGC+TGG | + | chr1.4:19835605-19835624 | MS.gene026355:intron | 35.0% | |
| CAACTTATCATGTGCTATGT+TGG | - | chr1.4:19834404-19834423 | None:intergenic | 35.0% | |
| CAAGCATCCACAAAAAAACA+TGG | + | chr1.4:19835238-19835257 | MS.gene026355:CDS | 35.0% | |
| CCTAATACCGCAAAAAGTTT+AGG | - | chr1.4:19832519-19832538 | None:intergenic | 35.0% | |
| CGCATGTTTAAACATGCTAA+AGG | + | chr1.4:19834139-19834158 | MS.gene026355:CDS | 35.0% | |
| CTACTCCAAATGAAGGAATA+GGG | - | chr1.4:19832154-19832173 | None:intergenic | 35.0% | |
| CTTGCACGAATTTGGTATAA+AGG | + | chr1.4:19835791-19835810 | MS.gene026355:CDS | 35.0% | |
| GAAGGAAAATCAGAGTGAAT+AGG | - | chr1.4:19834992-19835011 | None:intergenic | 35.0% | |
| GAGTCTGACATTGATACATA+TGG | + | chr1.4:19835524-19835543 | MS.gene026355:intron | 35.0% | |
| GCCATAGGGAAATTACATAA+TGG | - | chr1.4:19834480-19834499 | None:intergenic | 35.0% | |
| GGAAAAACAACTTGAGCATT+AGG | - | chr1.4:19834316-19834335 | None:intergenic | 35.0% | |
| GTCTGGTGATATATACTTGT+GGG | + | chr1.4:19831605-19831624 | MS.gene026355:CDS | 35.0% | |
| GTTAGTATGAAGATGCCAAA+TGG | - | chr1.4:19833997-19834016 | None:intergenic | 35.0% | |
| GTTTAAACATGCTAAAGGTG+TGG | + | chr1.4:19834144-19834163 | MS.gene026355:intron | 35.0% | |
| TAATCACATTAAGGAGCTTC+AGG | + | chr1.4:19835387-19835406 | MS.gene026355:CDS | 35.0% | |
| TAATTCACACATCTTGCTTC+TGG | + | chr1.4:19833670-19833689 | MS.gene026355:intron | 35.0% | |
| TAGAAGATGTACGATTGCTT+GGG | - | chr1.4:19835213-19835232 | None:intergenic | 35.0% | |
| TATGAGAACTTGCACGAATT+TGG | + | chr1.4:19835783-19835802 | MS.gene026355:CDS | 35.0% | |
| TATGTAATTTCCCTATGGCT+AGG | + | chr1.4:19834481-19834500 | MS.gene026355:intron | 35.0% | |
| TCACAGATCGCGAAAAATAT+TGG | - | chr1.4:19832950-19832969 | None:intergenic | 35.0% | |
| TCACCACTGCTGATAATTAT+GGG | + | chr1.4:19833867-19833886 | MS.gene026355:CDS | 35.0% | |
| TCGTGGATCATGTAAAATAG+TGG | + | chr1.4:19833494-19833513 | MS.gene026355:intron | 35.0% | |
| TGTCACTGCATTCACATAAT+AGG | + | chr1.4:19832001-19832020 | MS.gene026355:intron | 35.0% | |
| TGTCTGGTGATATATACTTG+TGG | + | chr1.4:19831604-19831623 | MS.gene026355:CDS | 35.0% | |
| TTAAAGACTGCTATCAACCT+AGG | + | chr1.4:19835313-19835332 | MS.gene026355:CDS | 35.0% | |
| TTAGAAGATGTACGATTGCT+TGG | - | chr1.4:19835214-19835233 | None:intergenic | 35.0% | |
| TTGTCAACTAGTGGCTATAA+TGG | + | chr1.4:19832791-19832810 | MS.gene026355:intron | 35.0% | |
| ! | ATTTGATGATTTGAGAAGCC+GGG | + | chr1.4:19833102-19833121 | MS.gene026355:CDS | 35.0% |
| ! | CCTAAACTTTTTGCGGTATT+AGG | + | chr1.4:19832516-19832535 | MS.gene026355:intron | 35.0% |
| ! | GAAATTACATAATGGAGCAC+AGG | - | chr1.4:19834472-19834491 | None:intergenic | 35.0% |
| ! | GCTTGATGCTTGGATTTTAA+TGG | + | chr1.4:19831648-19831667 | MS.gene026355:intron | 35.0% |
| ! | TATTTTTCCATCACTACTCC+CGG | - | chr1.4:19833819-19833838 | None:intergenic | 35.0% |
| ! | TATTTTTCGCGATCTGTGAT+TGG | + | chr1.4:19832951-19832970 | MS.gene026355:intron | 35.0% |
| ! | TCATCTATTTCTCAGCAACA+AGG | + | chr1.4:19835672-19835691 | MS.gene026355:intron | 35.0% |
| ! | TGTTTAAGATCTGGAAAACG+AGG | - | chr1.4:19833938-19833957 | None:intergenic | 35.0% |
| ! | TTTGTTAATTTCTGGGTCTG+AGG | + | chr1.4:19834072-19834091 | MS.gene026355:CDS | 35.0% |
| !! | ACTTCCTCATTTTAACAGCA+AGG | + | chr1.4:19834015-19834034 | MS.gene026355:intron | 35.0% |
| !! | ATGTTGTGATTGGTAATGGA+GGG | + | chr1.4:19833179-19833198 | MS.gene026355:CDS | 35.0% |
| !! | GATGTAAAATTTTGGAGGGT+AGG | - | chr1.4:19832487-19832506 | None:intergenic | 35.0% |
| !! | GGTGGGAATTTGTTAATTTC+TGG | + | chr1.4:19834064-19834083 | MS.gene026355:CDS | 35.0% |
| !! | TAAAATTTTGGAGGGTAGGA+GGG | - | chr1.4:19832483-19832502 | None:intergenic | 35.0% |
| !! | TAGTATTGCTTTTGCTTGAC+AGG | + | chr1.4:19834201-19834220 | MS.gene026355:intron | 35.0% |
| !!! | AGTTTTAAACGGGACAGTTT+TGG | + | chr1.4:19831731-19831750 | MS.gene026355:intron | 35.0% |
| AACTAAAGCACGAGTACCAA+AGG | + | chr1.4:19835727-19835746 | MS.gene026355:CDS | 40.0% | |
| AATGGCGTGTTACAATTCCA+TGG | + | chr1.4:19834897-19834916 | MS.gene026355:intron | 40.0% | |
| AATTATGGGACGCATATCAC+TGG | + | chr1.4:19833881-19833900 | MS.gene026355:CDS | 40.0% | |
| ACTTGCTTAGCATACAGCAA+AGG | + | chr1.4:19834043-19834062 | MS.gene026355:CDS | 40.0% | |
| AGAAAATACCAGGCAAGTGA+CGG | - | chr1.4:19832671-19832690 | None:intergenic | 40.0% | |
| AGAAATGGCATGCTCATTTG+AGG | + | chr1.4:19832644-19832663 | MS.gene026355:CDS | 40.0% | |
| AGGATGGAATAGTTCGTGTT+TGG | + | chr1.4:19834092-19834111 | MS.gene026355:CDS | 40.0% | |
| ATAAAGGAGCTATTGGATGG+TGG | + | chr1.4:19835807-19835826 | MS.gene026355:CDS | 40.0% | |
| ATATCACTGCCACATCTCTA+GGG | + | chr1.4:19834700-19834719 | MS.gene026355:intron | 40.0% | |
| CAGAGTAGTGTATCCCAAAA+TGG | - | chr1.4:19833064-19833083 | None:intergenic | 40.0% | |
| CATTTAACGACACTACTGCA+GGG | + | chr1.4:19833623-19833642 | MS.gene026355:intron | 40.0% | |
| CGAATTAGCGATTTCATCCA+TGG | - | chr1.4:19834917-19834936 | None:intergenic | 40.0% | |
| CGTAAAGATTCTTTCCTTCC+CGG | - | chr1.4:19833123-19833142 | None:intergenic | 40.0% | |
| CGTCAAGTGATGTAATGACT+TGG | - | chr1.4:19834735-19834754 | None:intergenic | 40.0% | |
| CTATAACATTGGTGCATAGC+TGG | - | chr1.4:19833532-19833551 | None:intergenic | 40.0% | |
| CTGGCAGATTGCTTAAGAAA+TGG | + | chr1.4:19832629-19832648 | MS.gene026355:CDS | 40.0% | |
| GAAATGGCATGCTCATTTGA+GGG | + | chr1.4:19832645-19832664 | MS.gene026355:CDS | 40.0% | |
| GACTTAGGTCATGTTTGGAT+TGG | - | chr1.4:19832294-19832313 | None:intergenic | 40.0% | |
| GAGGAGAAAAAGATAACCTG+TGG | - | chr1.4:19833919-19833938 | None:intergenic | 40.0% | |
| GCATAAAACACATGTTCAGC+TGG | - | chr1.4:19833797-19833816 | None:intergenic | 40.0% | |
| GGCAATACGCACTATAACAT+TGG | - | chr1.4:19833543-19833562 | None:intergenic | 40.0% | |
| GGTATAAAGGAGCTATTGGA+TGG | + | chr1.4:19835804-19835823 | MS.gene026355:CDS | 40.0% | |
| GTGAAAACTTCAGTATGCCA+GGG | - | chr1.4:19833389-19833408 | None:intergenic | 40.0% | |
| TAGTTTCAGCATCAGACGAT+CGG | + | chr1.4:19833215-19833234 | MS.gene026355:CDS | 40.0% | |
| TATATCACTGCCACATCTCT+AGG | + | chr1.4:19834699-19834718 | MS.gene026355:intron | 40.0% | |
| TATCAACCTAGGTGATAGCA+GGG | + | chr1.4:19835324-19835343 | MS.gene026355:CDS | 40.0% | |
| TCATTTAACGACACTACTGC+AGG | + | chr1.4:19833622-19833641 | MS.gene026355:intron | 40.0% | |
| TGAAGATGTGACACTTGACA+TGG | + | chr1.4:19834672-19834691 | MS.gene026355:intron | 40.0% | |
| TGATCAGTGTTGTCAACTAG+TGG | + | chr1.4:19832782-19832801 | MS.gene026355:intron | 40.0% | |
| TGGTGATATATACTTGTGGG+AGG | + | chr1.4:19831608-19831627 | MS.gene026355:CDS | 40.0% | |
| TGTGAAAACTTCAGTATGCC+AGG | - | chr1.4:19833390-19833409 | None:intergenic | 40.0% | |
| TTAATCTCTCTGGATGTTGC+AGG | + | chr1.4:19835148-19835167 | MS.gene026355:intron | 40.0% | |
| TTACTGTTGAGTCATCACAG+AGG | + | chr1.4:19832101-19832120 | MS.gene026355:intron | 40.0% | |
| TTTCCAAATAGCGGCTATAG+TGG | + | chr1.4:19832889-19832908 | MS.gene026355:intron | 40.0% | |
| ! | CTGAACATGTGTTTTATGCC+GGG | + | chr1.4:19833798-19833817 | MS.gene026355:CDS | 40.0% |
| ! | CTGGTTCATTTTCTAACCAC+AGG | + | chr1.4:19833900-19833919 | MS.gene026355:CDS | 40.0% |
| ! | GCTGAACATGTGTTTTATGC+CGG | + | chr1.4:19833797-19833816 | MS.gene026355:CDS | 40.0% |
| ! | TGCAGTAGTGTCGTTAAATG+AGG | - | chr1.4:19833623-19833642 | None:intergenic | 40.0% |
| ! | TGTAGCTGACCCAATTTTGT+CGG | + | chr1.4:19833452-19833471 | MS.gene026355:intron | 40.0% |
| ! | TTAATTTCTGGGTCTGAGGA+TGG | + | chr1.4:19834076-19834095 | MS.gene026355:CDS | 40.0% |
| !! | AAAATTTTGGAGGGTAGGAG+GGG | - | chr1.4:19832482-19832501 | None:intergenic | 40.0% |
| !! | ACTGCCTTGCTGTTAAAATG+AGG | - | chr1.4:19834022-19834041 | None:intergenic | 40.0% |
| !! | CTGATATCTGGTTCTGAAGA+TGG | + | chr1.4:19832706-19832725 | MS.gene026355:CDS | 40.0% |
| !! | GAATGTTGGTGCTACATAGA+TGG | - | chr1.4:19835473-19835492 | None:intergenic | 40.0% |
| !! | GATGTTGTGATTGGTAATGG+AGG | + | chr1.4:19833178-19833197 | MS.gene026355:CDS | 40.0% |
| !! | GTAAAATTTTGGAGGGTAGG+AGG | - | chr1.4:19832484-19832503 | None:intergenic | 40.0% |
| !! | GTCTTATTTACTCCCTCCAT+TGG | + | chr1.4:19835261-19835280 | MS.gene026355:CDS | 40.0% |
| !! | TTTAAACGGGACAGTTTTGG+AGG | + | chr1.4:19831734-19831753 | MS.gene026355:intron | 40.0% |
| !!! | TAAGAGTTTGGTCGCTTTTC+AGG | + | chr1.4:19832734-19832753 | MS.gene026355:CDS | 40.0% |
| AAACTTCAGTATGCCAGGGT+TGG | - | chr1.4:19833385-19833404 | None:intergenic | 45.0% | |
| AAAGCCACCCATTGCGATAA+CGG | - | chr1.4:19831943-19831962 | None:intergenic | 45.0% | |
| ACAATGATGTGGAGTCCATG+AGG | + | chr1.4:19834803-19834822 | MS.gene026355:intron | 45.0% | |
| ATCAACCTAGGTGATAGCAG+GGG | + | chr1.4:19835325-19835344 | MS.gene026355:CDS | 45.0% | |
| ATCAGACGATCGGATGTGTA+AGG | + | chr1.4:19833225-19833244 | MS.gene026355:CDS | 45.0% | |
| CAATGGAGATGGCTAACCAA+TGG | + | chr1.4:19835751-19835770 | MS.gene026355:CDS | 45.0% | |
| CGCGTAACTGATGTTGTGAT+TGG | + | chr1.4:19833169-19833188 | MS.gene026355:CDS | 45.0% | |
| CGTCCCATAATTATCAGCAG+TGG | - | chr1.4:19833873-19833892 | None:intergenic | 45.0% | |
| CTATCAACCTAGGTGATAGC+AGG | + | chr1.4:19835323-19835342 | MS.gene026355:CDS | 45.0% | |
| CTCCATCTCGATTTCAGAAG+CGG | - | chr1.4:19835706-19835725 | None:intergenic | 45.0% | |
| CTGGAGACATGACAATGATG+TGG | + | chr1.4:19834792-19834811 | MS.gene026355:intron | 45.0% | |
| GATGACTCACTGCTGATATC+TGG | + | chr1.4:19832694-19832713 | MS.gene026355:CDS | 45.0% | |
| GCTTAGCATACAGCAAAGGT+GGG | + | chr1.4:19834047-19834066 | MS.gene026355:CDS | 45.0% | |
| GGACACGTTAAACGAAGATG+CGG | - | chr1.4:19834833-19834852 | None:intergenic | 45.0% | |
| GTACCAAAGGACAATGGAGA+TGG | + | chr1.4:19835740-19835759 | MS.gene026355:CDS | 45.0% | |
| TAGCATCCCCTAAGTGATAG+CGG | + | chr1.4:19831977-19831996 | MS.gene026355:intron | 45.0% | |
| TAGCCATCTCCATTGTCCTT+TGG | - | chr1.4:19835746-19835765 | None:intergenic | 45.0% | |
| TATAGATGGAAGCAGCAAGC+AGG | - | chr1.4:19833325-19833344 | None:intergenic | 45.0% | |
| TCACATTCACGCTTGATGCT+TGG | + | chr1.4:19831638-19831657 | MS.gene026355:intron | 45.0% | |
| TCATGTGTCAGTGTCGTATC+CGG | + | chr1.4:19835581-19835600 | MS.gene026355:intron | 45.0% | |
| TGCTTAGCATACAGCAAAGG+TGG | + | chr1.4:19834046-19834065 | MS.gene026355:CDS | 45.0% | |
| TGGACTTGCCCGACAAAATT+GGG | - | chr1.4:19833464-19833483 | None:intergenic | 45.0% | |
| TGGTTACTTGTAACCAACCC+TGG | + | chr1.4:19833369-19833388 | MS.gene026355:intron | 45.0% | |
| TTAGTGACGCTGTAGCATAG+AGG | - | chr1.4:19833590-19833609 | None:intergenic | 45.0% | |
| TTCAGCTGGATCCAAGACAA+TGG | - | chr1.4:19833783-19833802 | None:intergenic | 45.0% | |
| ! | GTAGCTGACCCAATTTTGTC+GGG | + | chr1.4:19833453-19833472 | MS.gene026355:intron | 45.0% |
| ! | TAATCACCAAGGCACCTATC+TGG | + | chr1.4:19831569-19831588 | MS.gene026355:CDS | 45.0% |
| ! | TTTTATGCCGGGAGTAGTGA+TGG | + | chr1.4:19833809-19833828 | MS.gene026355:CDS | 45.0% |
| !! | GCATGCTTTAGAAGGTGACT+CGG | - | chr1.4:19835116-19835135 | None:intergenic | 45.0% |
| !!! | CTTTTTTATTTTTAATTTAA+AGG | + | chr1.4:19835442-19835461 | MS.gene026355:intron | 5.0% |
| AAGTCCAGTGCTGTCAATCG+TGG | + | chr1.4:19833477-19833496 | MS.gene026355:intron | 50.0% | |
| AATGCCGTTATCGCAATGGG+TGG | + | chr1.4:19831936-19831955 | MS.gene026355:intron | 50.0% | |
| AGTGACAGCCGCTATCACTT+AGG | - | chr1.4:19831988-19832007 | None:intergenic | 50.0% | |
| CAAAGCTCCACCAACCAGAT+AGG | - | chr1.4:19831586-19831605 | None:intergenic | 50.0% | |
| CACAACATCAGTTACGCGCA+TGG | - | chr1.4:19833167-19833186 | None:intergenic | 50.0% | |
| CACTTCCATCCCTAGAGATG+TGG | - | chr1.4:19834712-19834731 | None:intergenic | 50.0% | |
| CATCTCGATTTCAGAAGCGG+CGG | - | chr1.4:19835703-19835722 | None:intergenic | 50.0% | |
| CTGGACTTGCCCGACAAAAT+TGG | - | chr1.4:19833465-19833484 | None:intergenic | 50.0% | |
| GATGATTTGAGAAGCCGGGA+AGG | + | chr1.4:19833106-19833125 | MS.gene026355:CDS | 50.0% | |
| GCACCACTATAGCCGCTATT+TGG | - | chr1.4:19832895-19832914 | None:intergenic | 50.0% | |
| GCACGAGTACCAAAGGACAA+TGG | + | chr1.4:19835734-19835753 | MS.gene026355:CDS | 50.0% | |
| GGGAGATGTGTTTGCAACAG+TGG | + | chr1.4:19832190-19832209 | MS.gene026355:intron | 50.0% | |
| GTGACAGCCGCTATCACTTA+GGG | - | chr1.4:19831987-19832006 | None:intergenic | 50.0% | |
| TAGGTATGGAGCTTAGCGAG+AGG | + | chr1.4:19833716-19833735 | MS.gene026355:intron | 50.0% | |
| TGACAGCCGCTATCACTTAG+GGG | - | chr1.4:19831986-19832005 | None:intergenic | 50.0% | |
| TGATCCACGATTGACAGCAC+TGG | - | chr1.4:19833484-19833503 | None:intergenic | 50.0% | |
| ! | CAGTCATTAGAGGGCATGAC+AGG | - | chr1.4:19834854-19834873 | None:intergenic | 50.0% |
| ! | CCTTGGTGATTAGCAGCAAG+GGG | - | chr1.4:19831561-19831580 | None:intergenic | 50.0% |
| ! | GCCTTGGTGATTAGCAGCAA+GGG | - | chr1.4:19831562-19831581 | None:intergenic | 50.0% |
| ! | TGCCTTGGTGATTAGCAGCA+AGG | - | chr1.4:19831563-19831582 | None:intergenic | 50.0% |
| AGGTGATAGCAGGGGATGCA+TGG | + | chr1.4:19835333-19835352 | MS.gene026355:CDS | 55.0% | |
| CACCAACCAGATAGGTGCCT+TGG | - | chr1.4:19831578-19831597 | None:intergenic | 55.0% | |
| CCCCTTGCTGCTAATCACCA+AGG | + | chr1.4:19831558-19831577 | MS.gene026355:CDS | 55.0% | |
| CGAAGATGCGGAAGTCCTCA+TGG | - | chr1.4:19834821-19834840 | None:intergenic | 55.0% | |
| GCGCACACACACAGAAAGGA+TGG | - | chr1.4:19834431-19834450 | None:intergenic | 55.0% | |
| TGCATCCCCTGCTATCACCT+AGG | - | chr1.4:19835333-19835352 | None:intergenic | 55.0% | |
| TTGCGCGCACACACACAGAA+AGG | - | chr1.4:19834435-19834454 | None:intergenic | 55.0% | |
| TTTCTGTGTGTGTGCGCGCA+AGG | + | chr1.4:19834434-19834453 | MS.gene026355:intron | 55.0% | |
| ! | AGGGGCTTGATAGCTTCAGC+AGG | - | chr1.4:19831543-19831562 | None:intergenic | 55.0% |
| ! | CAAGGCACCTATCTGGTTGG+TGG | + | chr1.4:19831576-19831595 | MS.gene026355:CDS | 55.0% |
| ! | CACCAAGGCACCTATCTGGT+TGG | + | chr1.4:19831573-19831592 | MS.gene026355:CDS | 55.0% |
| ! | CACTGCCACATCTCTAGGGA+TGG | + | chr1.4:19834704-19834723 | MS.gene026355:intron | 55.0% |
| !! | CGCCGCTTCTGAAATCGAGA+TGG | + | chr1.4:19835701-19835720 | MS.gene026355:CDS | 55.0% |
| !! | CTGGTTGGTGGAGCTTTGTC+TGG | + | chr1.4:19831588-19831607 | MS.gene026355:CDS | 55.0% |
| AACGACACTACTGCAGGGCC+TGG | + | chr1.4:19833628-19833647 | MS.gene026355:intron | 60.0% | |
| CTTAGGGGATGCTACGCTGC+TGG | - | chr1.4:19831971-19831990 | None:intergenic | 60.0% | |
| TTTGAGGGCCGTCACTTGCC+TGG | + | chr1.4:19832660-19832679 | MS.gene026355:CDS | 60.0% | |
| AGGGGATGCTACGCTGCTGG+TGG | - | chr1.4:19831968-19831987 | None:intergenic | 65.0% | |
| GGGATGCTACGCTGCTGGTG+GGG | - | chr1.4:19831966-19831985 | None:intergenic | 65.0% | |
| GGGGATGCTACGCTGCTGGT+GGG | - | chr1.4:19831967-19831986 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 19831516 | 19835863 | 19831516 | ID=MS.gene026355 |
| chr1.4 | mRNA | 19831516 | 19835863 | 19831516 | ID=MS.gene026355.t1;Parent=MS.gene026355 |
| chr1.4 | exon | 19831516 | 19831629 | 19831516 | ID=MS.gene026355.t1.exon1;Parent=MS.gene026355.t1 |
| chr1.4 | CDS | 19831516 | 19831629 | 19831516 | ID=cds.MS.gene026355.t1;Parent=MS.gene026355.t1 |
| chr1.4 | exon | 19832622 | 19832755 | 19832622 | ID=MS.gene026355.t1.exon2;Parent=MS.gene026355.t1 |
| chr1.4 | CDS | 19832622 | 19832755 | 19832622 | ID=cds.MS.gene026355.t1;Parent=MS.gene026355.t1 |
| chr1.4 | exon | 19833099 | 19833246 | 19833099 | ID=MS.gene026355.t1.exon3;Parent=MS.gene026355.t1 |
| chr1.4 | CDS | 19833099 | 19833246 | 19833099 | ID=cds.MS.gene026355.t1;Parent=MS.gene026355.t1 |
| chr1.4 | exon | 19833719 | 19833921 | 19833719 | ID=MS.gene026355.t1.exon4;Parent=MS.gene026355.t1 |
| chr1.4 | CDS | 19833719 | 19833921 | 19833719 | ID=cds.MS.gene026355.t1;Parent=MS.gene026355.t1 |
| chr1.4 | exon | 19834033 | 19834160 | 19834033 | ID=MS.gene026355.t1.exon5;Parent=MS.gene026355.t1 |
| chr1.4 | CDS | 19834033 | 19834160 | 19834033 | ID=cds.MS.gene026355.t1;Parent=MS.gene026355.t1 |
| chr1.4 | exon | 19835170 | 19835408 | 19835170 | ID=MS.gene026355.t1.exon6;Parent=MS.gene026355.t1 |
| chr1.4 | CDS | 19835170 | 19835408 | 19835170 | ID=cds.MS.gene026355.t1;Parent=MS.gene026355.t1 |
| chr1.4 | exon | 19835687 | 19835863 | 19835687 | ID=MS.gene026355.t1.exon7;Parent=MS.gene026355.t1 |
| chr1.4 | CDS | 19835687 | 19835863 | 19835687 | ID=cds.MS.gene026355.t1;Parent=MS.gene026355.t1 |
| Gene Sequence |
| Protein sequence |
