AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066499

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066499.t1 MTR_8g073250 98.876 445 2 1 1 445 1 442 0.0 910
MS.gene066499.t1 MTR_5g024270 82.287 446 78 1 1 445 1 446 0.0 746
MS.gene066499.t1 MTR_5g024270 84.548 343 52 1 1 342 1 343 0.0 586
MS.gene066499.t1 MTR_1g061690 48.456 518 189 6 2 441 8 525 2.46e-173 497
MS.gene066499.t1 MTR_4g056390 48.155 515 181 7 12 441 13 526 4.96e-167 481
MS.gene066499.t1 MTR_2g084555 46.014 276 126 3 183 441 253 522 2.40e-80 258
MS.gene066499.t1 MTR_2g084555 56.019 216 82 1 6 208 8 223 4.15e-79 255
MS.gene066499.t1 MTR_3g109390 29.426 418 218 13 5 413 27 376 6.08e-42 153
MS.gene066499.t1 MTR_3g109390 29.665 418 217 14 5 413 49 398 7.48e-40 147
MS.gene066499.t1 MTR_3g109390 29.904 418 214 15 5 413 49 396 1.75e-39 146
MS.gene066499.t1 MTR_3g076540 29.369 412 204 13 21 414 78 420 3.01e-39 146
MS.gene066499.t1 MTR_3g109390 30.053 376 194 11 47 413 70 385 1.35e-38 144
MS.gene066499.t1 MTR_3g076540 29.455 404 198 13 29 414 4 338 1.97e-38 142
MS.gene066499.t1 MTR_3g109390 30.053 376 194 11 47 413 92 407 3.49e-38 143
MS.gene066499.t1 MTR_4g104620 29.440 411 209 13 21 416 82 426 1.17e-37 142
MS.gene066499.t1 MTR_3g076540 29.306 389 189 12 44 414 1 321 1.70e-36 137
MS.gene066499.t1 MTR_3g076540 28.810 420 204 14 21 414 78 428 1.87e-36 139
MS.gene066499.t1 MTR_3g109390 30.199 351 177 11 5 355 49 331 9.21e-36 135
MS.gene066499.t1 MTR_4g104620 29.592 392 190 13 43 416 9 332 1.32e-35 134
MS.gene066499.t1 MTR_4g104620 29.412 391 190 13 44 416 1 323 5.24e-35 132
MS.gene066499.t1 MTR_3g086530 28.530 347 185 9 21 367 77 360 2.05e-33 129
MS.gene066499.t1 MTR_3g086530 28.530 347 185 9 21 367 77 360 4.45e-33 129
MS.gene066499.t1 MTR_3g086530 28.947 304 154 8 64 367 2 243 8.04e-29 115
MS.gene066499.t1 MTR_3g086530 29.021 286 153 7 21 306 77 312 4.42e-27 110
MS.gene066499.t1 MTR_3g086530 28.689 244 117 6 124 367 2 188 6.43e-21 92.0
MS.gene066499.t1 MTR_6g074905 32.143 168 100 5 252 413 1005 1164 4.85e-19 90.5
MS.gene066499.t1 MTR_0349s0030 32.143 168 100 5 252 413 125 284 1.99e-18 85.9
MS.gene066499.t1 MTR_5g082700 31.098 164 101 4 254 413 550 705 3.48e-18 87.8
MS.gene066499.t1 MTR_5g082700 32.258 155 96 3 29 179 394 543 2.34e-12 69.3
MS.gene066499.t1 MTR_8g070930 33.103 145 91 3 37 180 138 277 1.03e-17 86.3
MS.gene066499.t1 MTR_8g070930 39.815 108 58 3 254 360 285 386 1.26e-13 73.6
MS.gene066499.t1 MTR_1g111180 32.609 184 91 8 254 416 822 993 2.03e-13 73.2
MS.gene066499.t1 MTR_1g111180 30.233 172 101 5 11 177 657 814 2.50e-11 66.6
MS.gene066499.t1 MTR_1g111180 32.609 184 91 8 254 416 823 994 2.03e-13 73.2
MS.gene066499.t1 MTR_1g111180 30.233 172 101 5 11 177 658 815 2.48e-11 66.6
MS.gene066499.t1 MTR_5g082700 32.886 149 91 3 35 179 400 543 2.45e-12 69.3
MS.gene066499.t1 MTR_5g082700 32.886 149 91 3 35 179 400 543 2.47e-12 69.3
MS.gene066499.t1 MTR_6g074750 45.000 60 31 1 252 309 54 113 1.15e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066499.t1 AT4G35500 73.034 445 109 3 1 442 1 437 0.0 666
MS.gene066499.t1 AT2G17530 73.198 444 109 3 1 442 1 436 0.0 653
MS.gene066499.t1 AT2G17530 73.198 444 109 3 1 442 1 436 0.0 653
MS.gene066499.t1 AT4G35500 70.852 446 118 4 1 442 1 438 0.0 643
MS.gene066499.t1 AT2G17530 78.363 342 72 2 1 340 1 342 0.0 525
MS.gene066499.t1 AT3G53030 50.420 476 178 6 12 431 16 489 8.10e-168 482
MS.gene066499.t1 AT5G22840 49.476 477 184 4 4 428 11 482 1.14e-164 474
MS.gene066499.t1 AT3G44850 47.276 514 191 6 12 445 19 532 1.70e-162 469
MS.gene066499.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene066499.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene066499.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene066499.t1 AT4G32660 28.288 403 218 10 21 413 47 388 4.78e-39 145
MS.gene066499.t1 AT3G53570 29.676 401 218 10 21 413 85 429 5.30e-39 146
MS.gene066499.t1 AT3G53570 29.676 401 218 10 21 413 85 429 5.30e-39 146
MS.gene066499.t1 AT4G32660 28.288 403 218 10 21 413 55 396 6.83e-39 145
MS.gene066499.t1 AT4G24740 29.710 414 204 14 21 416 44 388 1.49e-38 144
MS.gene066499.t1 AT4G24740 29.227 414 206 13 21 416 82 426 4.75e-38 143
MS.gene066499.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene066499.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene066499.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene066499.t1 AT4G32660 28.657 335 180 8 21 355 55 330 3.97e-35 134
MS.gene066499.t1 AT4G24740 30.625 320 164 8 21 340 82 343 5.63e-34 130
MS.gene066499.t1 AT4G24740 31.313 297 147 8 44 340 1 240 7.27e-32 122
MS.gene066499.t1 AT4G32660 28.280 343 174 11 82 413 3 284 5.58e-30 118
MS.gene066499.t1 AT4G24740 30.420 286 147 7 21 306 82 315 6.65e-28 113
MS.gene066499.t1 AT1G73460 34.524 168 96 5 252 413 1001 1160 1.20e-21 98.6
MS.gene066499.t1 AT1G73460 34.524 168 96 5 252 413 1001 1160 1.20e-21 98.6
MS.gene066499.t1 AT1G73450 34.524 168 96 5 252 413 984 1143 1.34e-21 98.6
MS.gene066499.t1 AT2G40120 24.561 399 210 12 29 418 252 568 8.96e-21 95.5
MS.gene066499.t1 AT4G24740 29.630 270 110 10 165 416 13 220 3.00e-20 89.4
MS.gene066499.t1 AT4G24740 29.630 270 110 10 165 416 13 220 3.00e-20 89.4
MS.gene066499.t1 AT5G35980 31.111 180 110 6 12 185 94 265 6.90e-19 90.1
MS.gene066499.t1 AT5G35980 30.918 207 87 7 254 413 267 464 1.39e-14 76.6
MS.gene066499.t1 AT5G35980 32.667 150 95 3 37 185 121 265 1.05e-18 89.7
MS.gene066499.t1 AT5G35980 43.878 98 49 2 254 351 267 358 1.34e-14 76.6
MS.gene066499.t1 AT5G35980 31.111 180 110 6 12 185 59 230 1.14e-18 89.4
MS.gene066499.t1 AT5G35980 43.878 98 49 2 254 351 232 323 1.42e-14 76.6
MS.gene066499.t1 AT3G17750 32.143 168 100 5 252 413 970 1129 1.40e-17 86.3
MS.gene066499.t1 AT3G53640 31.148 183 96 6 254 416 470 642 2.14e-14 75.9
MS.gene066499.t1 AT1G13350 30.435 184 96 7 254 416 589 761 2.90e-13 72.4
MS.gene066499.t1 AT1G13350 30.814 172 100 5 11 177 424 581 6.90e-12 68.2
MS.gene066499.t1 AT1G13350 30.435 184 96 7 254 416 616 788 3.35e-13 72.4
MS.gene066499.t1 AT1G13350 30.814 172 100 5 11 177 451 608 7.53e-12 68.2
MS.gene066499.t1 AT1G13350 30.435 184 96 7 254 416 662 834 3.62e-13 72.4
MS.gene066499.t1 AT1G13350 30.814 172 100 5 11 177 497 654 8.88e-12 67.8
MS.gene066499.t1 AT3G25840 31.694 183 94 7 254 416 502 673 6.96e-13 71.2
MS.gene066499.t1 AT3G25840 31.720 186 90 9 254 416 764 935 8.61e-13 71.2

Find 125 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATATTTCTATCAGAATT+TGG 0.182704 8.2:+31049582 None:intergenic
ATGTCTTGTTCTTCTTCATC+TGG 0.217080 8.2:-31051197 MS.gene066499:CDS
GGATTCGGAGGCTAAAATTT+TGG 0.237408 8.2:-31048225 MS.gene066499:CDS
TTCTGGACAAAGAGCTTCTA+TGG 0.246761 8.2:-31049622 MS.gene066499:CDS
TTCTGCAGTTGGTCGCTTCT+CGG 0.258297 8.2:+31048108 None:intergenic
AGGGCGGTAGCTAAAATTTC+TGG 0.265940 8.2:-31049639 MS.gene066499:CDS
CCATGAGCCAAGGGTGTTGC+AGG 0.266108 8.2:+31048080 None:intergenic
AGATGCAAAGTGGTTGATTT+TGG 0.275568 8.2:-31049546 MS.gene066499:CDS
GTACATAGCTCAGAGGAAAT+TGG 0.318879 8.2:-31051087 MS.gene066499:CDS
CAGCATGGTATCCACCTTTC+CGG 0.321046 8.2:+31051141 None:intergenic
AAAACTTGAAAATGTTCTTC+TGG 0.321760 8.2:-31049790 MS.gene066499:CDS
CCCTCAGGCCTCTCTAAAAT+CGG 0.323007 8.2:+31049720 None:intergenic
GCTAAAACCTTGTCCGACTT+TGG 0.352838 8.2:+31049362 None:intergenic
GTCTGAATTTCTTCCGCAAA+TGG 0.355796 8.2:+31049501 None:intergenic
CTAAAACCTTGTCCGACTTT+GGG 0.366642 8.2:+31049363 None:intergenic
TTCCAAGGAGTTCCATCATC+AGG 0.368239 8.2:+31048517 None:intergenic
GGGGAGACTCCCGATCTAAC+AGG 0.374226 8.2:+31049741 None:intergenic
AAGTGCAGCGCAGTTTGTTC+AGG 0.376553 8.2:-31050090 MS.gene066499:CDS
TCAATCAATAGTTTGTTAAG+AGG 0.383534 8.2:+31048202 None:intergenic
AGCTCAGAGGAAATTGGGTT+GGG 0.387320 8.2:-31051081 MS.gene066499:CDS
CGGTGGGAACACTACCTTCC+GGG 0.395671 8.2:+31048488 None:intergenic
TGCATGGTACTCGAATTTCT+TGG 0.404519 8.2:-31049948 MS.gene066499:CDS
ATTGCTTTCGAGCTTGCCAC+TGG 0.409835 8.2:-31049402 MS.gene066499:CDS
TGTCTTGTTCTTCTTCATCT+GGG 0.422803 8.2:-31051196 MS.gene066499:CDS
GCTTAAAGTGGTCGATCAAT+TGG 0.423698 8.2:+31049997 None:intergenic
ATGCATTGGTGCTGGCCGTT+AGG 0.428045 8.2:+31049966 None:intergenic
GATTCATTTCTCATTTCATC+AGG 0.430586 8.2:+31048043 None:intergenic
TACATAGCTCAGAGGAAATT+GGG 0.433819 8.2:-31051086 MS.gene066499:CDS
TCTGCAGTTGGTCGCTTCTC+GGG 0.434856 8.2:+31048109 None:intergenic
ACACCCTTGGCTCATGGAAA+AGG 0.460564 8.2:-31048074 MS.gene066499:CDS
CCTCAGGCCTCTCTAAAATC+GGG 0.463410 8.2:+31049721 None:intergenic
AAGGTGGATACCATGCTGTC+CGG 0.465806 8.2:-31051136 MS.gene066499:CDS
GTCTTCCGATGAATAAAGTC+AGG 0.469765 8.2:-31049884 MS.gene066499:CDS
AATTCTGATAGAAATATTGA+TGG 0.472298 8.2:-31049579 MS.gene066499:CDS
AAAAGTTGAAAAGGAGAGCA+AGG 0.476403 8.2:-31049662 MS.gene066499:CDS
AGAGCTTCTATGGGAGGAAT+GGG 0.477776 8.2:-31049612 MS.gene066499:CDS
TGGTTTGGATTACTTGCATA+GGG 0.485784 8.2:-31049838 MS.gene066499:CDS
CCTGCAACACCCTTGGCTCA+TGG 0.486242 8.2:-31048080 MS.gene066499:CDS
AAGAGCTTCTATGGGAGGAA+TGG 0.488237 8.2:-31049613 MS.gene066499:CDS
ACGGGGATCTCAAAAGGATT+CGG 0.490967 8.2:-31048240 MS.gene066499:CDS
AACTCCTTGGAAAGATGCCC+CGG 0.491317 8.2:-31048506 MS.gene066499:CDS
CCAGCCTGCAGTATAACTTC+AGG 0.494640 8.2:+31049462 None:intergenic
ATTCCTTCTCCGTCGATATG+TGG 0.494693 8.2:-31049437 MS.gene066499:CDS
ATGTTACAGGTTGCTACTGC+AGG 0.497187 8.2:-31048292 MS.gene066499:intron
ACAGACACGGGGATCTCAAA+AGG 0.497743 8.2:-31048246 MS.gene066499:CDS
GGCGAAAGACCCTGTTAGAT+CGG 0.498073 8.2:-31049751 MS.gene066499:CDS
AACAGTGCCTGCAACACCCT+TGG 0.502041 8.2:-31048087 MS.gene066499:CDS
TCTGGTTTCTACTATCGATC+CGG 0.502093 8.2:-31049772 MS.gene066499:CDS
AATAAGCAACCTTAAAATCA+AGG 0.503806 8.2:-31047996 MS.gene066499:CDS
TGCAGGCACTGTTCTGCAGT+TGG 0.504517 8.2:+31048097 None:intergenic
AGGCCTGAGGGAAACATAAA+CGG 0.506847 8.2:-31049708 MS.gene066499:CDS
GCGCCGTTTATGTTTCCCTC+AGG 0.507071 8.2:+31049705 None:intergenic
CGAGTACCATGCATTGGTGC+TGG 0.511219 8.2:+31049958 None:intergenic
GCGAAAGACCCTGTTAGATC+GGG 0.514836 8.2:-31049750 MS.gene066499:CDS
GTGATCAGTTCGCCGGTGGA+AGG 0.518910 8.2:-31051109 MS.gene066499:CDS
AGCTCCTGAAGTTATACTGC+AGG 0.520770 8.2:-31049466 MS.gene066499:CDS
GTTCTTTCATCCATTGCTGA+TGG 0.521395 8.2:-31050047 MS.gene066499:CDS
AAATCAAGGTGGGGAAGTGA+AGG 0.521806 8.2:-31047982 None:intergenic
AGGTGGATACCATGCTGTCC+GGG 0.530748 8.2:-31051135 MS.gene066499:CDS
TTGCTTTCGAGCTTGCCACT+GGG 0.531169 8.2:-31049401 MS.gene066499:CDS
ATGAAGGCTTTGATTCCTAC+CGG 0.531226 8.2:-31051160 MS.gene066499:CDS
GGATCACCTTGCCCTGATGA+TGG 0.535748 8.2:-31048529 MS.gene066499:CDS
AGCAACCTTAAAATCAAGGT+GGG 0.536200 8.2:-31047992 MS.gene066499:CDS
AGGATTTCTTCGACAGACAC+GGG 0.536846 8.2:-31048258 MS.gene066499:CDS
TTGGGCTGATAAGCCATTTG+CGG 0.537617 8.2:-31049514 MS.gene066499:CDS
TAGCTCAGAGGAAATTGGGT+TGG 0.539063 8.2:-31051082 MS.gene066499:CDS
TTGGTTTGGATTACTTGCAT+AGG 0.539558 8.2:-31049839 MS.gene066499:CDS
ATGTTATTTACTCCCAAAGT+CGG 0.550928 8.2:-31049375 MS.gene066499:CDS
GATTACTTGCATAGGGAACA+TGG 0.550939 8.2:-31049831 MS.gene066499:CDS
CCTTCCGGGGCATCTTTCCA+AGG 0.553985 8.2:+31048502 None:intergenic
GTCGGTGATCAGTTCGCCGG+TGG 0.559099 8.2:-31051113 MS.gene066499:CDS
TGAAGGGGCGCCATCAGCAA+TGG 0.565495 8.2:+31050037 None:intergenic
GTTGAAAAGGAGAGCAAGGA+GGG 0.566829 8.2:-31049658 MS.gene066499:CDS
TCTGGACAAAGAGCTTCTAT+GGG 0.567262 8.2:-31049621 MS.gene066499:CDS
CGGCGAACTGATCACCGACC+CGG 0.567799 8.2:+31051117 None:intergenic
AAGGATTTCTTCGACAGACA+CGG 0.569862 8.2:-31048259 MS.gene066499:CDS
GGCTTTGATTCCTACCGGAA+AGG 0.573918 8.2:-31051155 MS.gene066499:CDS
ATCTCCCTGACTTTATTCAT+CGG 0.573932 8.2:+31049879 None:intergenic
GGATTGAGAACATACATCGT+TGG 0.574635 8.2:+31051022 None:intergenic
GTGTCTGTCGAAGAAATCCT+TGG 0.579045 8.2:+31048261 None:intergenic
GAAATTCGAGTACCATGCAT+TGG 0.579276 8.2:+31049952 None:intergenic
ATTCTGATAGAAATATTGAT+GGG 0.582335 8.2:-31049578 MS.gene066499:CDS
GATCTAACAGGGTCTTTCGC+CGG 0.591268 8.2:+31049753 None:intergenic
TTTACTCCCAAAGTCGGACA+AGG 0.591377 8.2:-31049369 MS.gene066499:CDS
TCCAAGGAGTTCCATCATCA+GGG 0.591920 8.2:+31048518 None:intergenic
TCATCGGAAGACCTTTGTAA+CGG 0.595143 8.2:+31049895 None:intergenic
CGGGTCGGTGATCAGTTCGC+CGG 0.595542 8.2:-31051116 MS.gene066499:CDS
TAGGACCTGTGTGCTTAAAG+TGG 0.596811 8.2:+31049985 None:intergenic
GGGTCTGAAGATGATGATGA+AGG 0.603847 8.2:-31051176 MS.gene066499:CDS
GGATACCATGCTGTCCGGGT+CGG 0.605762 8.2:-31051131 MS.gene066499:CDS
TTTAAGCACACAGGTCCTAA+CGG 0.605824 8.2:-31049981 MS.gene066499:CDS
CTGAGCTATGTACCTTCCAC+CGG 0.605904 8.2:+31051097 None:intergenic
AGACCACATATCGACGGAGA+AGG 0.607795 8.2:+31049434 None:intergenic
AGTATCAAAAGCAAGCCAAA+CGG 0.608489 8.2:+31051046 None:intergenic
ATGGTATCCACCTTTCCGGT+AGG 0.608525 8.2:+31051145 None:intergenic
AATGAGAAATGAATCTAGTG+TGG 0.608814 8.2:-31048035 MS.gene066499:CDS
GCCCTGATGATGGAACTCCT+TGG 0.613944 8.2:-31048519 MS.gene066499:CDS
GCTCAGAGGAAATTGGGTTG+GGG 0.614301 8.2:-31051080 MS.gene066499:CDS
TTTGATTCCTACCGGAAAGG+TGG 0.616024 8.2:-31051152 MS.gene066499:CDS
CCTGAAGTTATACTGCAGGC+TGG 0.616462 8.2:-31049462 MS.gene066499:CDS
GTCAGATACAACCGTTACAA+AGG 0.617545 8.2:-31049906 MS.gene066499:CDS
TGCTTTCGAGCTTGCCACTG+GGG 0.622478 8.2:-31049400 MS.gene066499:CDS
GATCACCGACCCGGACAGCA+TGG 0.622696 8.2:+31051126 None:intergenic
GGGAGACTCCCGATCTAACA+GGG 0.627241 8.2:+31049742 None:intergenic
TAACGGCCAGCACCAATGCA+TGG 0.636403 8.2:-31049964 MS.gene066499:CDS
GGAGTTCCATCATCAGGGCA+AGG 0.636676 8.2:+31048523 None:intergenic
CTCAGGCCTCTCTAAAATCG+GGG 0.638151 8.2:+31049722 None:intergenic
TCGGGTGCAAAATCAAGAAG+AGG 0.638735 8.2:+31048127 None:intergenic
ATCGACCACTTTAAGCACAC+AGG 0.642901 8.2:-31049990 MS.gene066499:CDS
GCAACCTTAAAATCAAGGTG+GGG 0.643577 8.2:-31047991 MS.gene066499:CDS
AGCAAAAGACCACATATCGA+CGG 0.644032 8.2:+31049428 None:intergenic
GGTGGGAACACTACCTTCCG+GGG 0.647201 8.2:+31048489 None:intergenic
CCTTGGAAAGATGCCCCGGA+AGG 0.648843 8.2:-31048502 MS.gene066499:intron
AAGCAACCTTAAAATCAAGG+TGG 0.649106 8.2:-31047993 MS.gene066499:CDS
GGACAAAGAGCTTCTATGGG+AGG 0.655170 8.2:-31049618 MS.gene066499:CDS
GGGATCTCAAAAGGATTCGG+AGG 0.658136 8.2:-31048237 MS.gene066499:CDS
GGATTTCTTCGACAGACACG+GGG 0.676658 8.2:-31048257 MS.gene066499:CDS
TCTTCCGATGAATAAAGTCA+GGG 0.678520 8.2:-31049883 MS.gene066499:CDS
GAAAAGGAGAGCAAGGAGGG+CGG 0.678748 8.2:-31049655 MS.gene066499:CDS
GATTGATGTTAGATGCAAAG+TGG 0.684911 8.2:-31049556 MS.gene066499:CDS
AGTTGAAAAGGAGAGCAAGG+AGG 0.686372 8.2:-31049659 MS.gene066499:CDS
TACTGCAGGAGTGAAATCCA+AGG 0.690749 8.2:-31048278 MS.gene066499:CDS
AGTAAATAACATATCCCCAG+TGG 0.717830 8.2:+31049386 None:intergenic
GTGGAAGGTACATAGCTCAG+AGG 0.720598 8.2:-31051094 MS.gene066499:CDS
TGAGGGAAACATAAACGGCG+CGG 0.758453 8.2:-31049703 MS.gene066499:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTTATAATAGTGAT+TGG - chr8.2:31048383-31048402 MS.gene066499:intron 15.0%
!! AATTCTGATAGAAATATTGA+TGG - chr8.2:31049603-31049622 MS.gene066499:CDS 20.0%
!! AGATTGCAATAATACAAAAA+GGG + chr8.2:31048211-31048230 None:intergenic 20.0%
!! ATTCTGATAGAAATATTGAT+GGG - chr8.2:31049604-31049623 MS.gene066499:CDS 20.0%
!! CAAAACAAATCTTTATCTTT+AGG + chr8.2:31048184-31048203 None:intergenic 20.0%
!! CTATTATATCATGTATAGTT+AGG + chr8.2:31050193-31050212 None:intergenic 20.0%
!! GATATTTGACAAGAAATAAA+AGG + chr8.2:31049018-31049037 None:intergenic 20.0%
!! TATTCAATGAACCTAAAAAA+TGG + chr8.2:31048287-31048306 None:intergenic 20.0%
!! TTATTGAGAAAAAGTTGAAA+AGG - chr8.2:31049511-31049530 MS.gene066499:CDS 20.0%
!!! AACAAATTTTGAATTTGAAG+GGG + chr8.2:31049163-31049182 None:intergenic 20.0%
!!! ACAACAAATTTTGAATTTGA+AGG + chr8.2:31049165-31049184 None:intergenic 20.0%
!!! ATTATAGGTTGATAATGATT+GGG - chr8.2:31048791-31048810 MS.gene066499:intron 20.0%
!!! CAACAAATTTTGAATTTGAA+GGG + chr8.2:31049164-31049183 None:intergenic 20.0%
!!! CATTTTCAAATCGATAAATA+CGG + chr8.2:31048623-31048642 None:intergenic 20.0%
!!! TAAATAGGTGTTAATTTTGT+TGG - chr8.2:31048884-31048903 MS.gene066499:intron 20.0%
!!! TAATAGTTGTTACTTTATTG+AGG - chr8.2:31050328-31050347 MS.gene066499:intron 20.0%
!!! TATAGTTTTGAATCTTTGAT+TGG - chr8.2:31050505-31050524 MS.gene066499:intron 20.0%
!!! TATTATAGGTTGATAATGAT+TGG - chr8.2:31048790-31048809 MS.gene066499:intron 20.0%
!!! TATTGAATAAACAGTCATTT+TGG - chr8.2:31049891-31049910 MS.gene066499:CDS 20.0%
!!! TCAATATTTCTATCAGAATT+TGG + chr8.2:31049603-31049622 None:intergenic 20.0%
! AAAACTTGAAAATGTTCTTC+TGG - chr8.2:31049392-31049411 MS.gene066499:CDS 25.0%
! AATAAGCAACCTTAAAATCA+AGG - chr8.2:31051186-31051205 MS.gene066499:CDS 25.0%
! ATAGCTAAATGTTAAGACTT+TGG - chr8.2:31048968-31048987 MS.gene066499:intron 25.0%
! ATCTTCTGTTAGTAATTTGA+TGG + chr8.2:31050003-31050022 None:intergenic 25.0%
! ATTTAATACTTGCATGTTAC+AGG - chr8.2:31050877-31050896 MS.gene066499:intron 25.0%
! CAGATTGCAATAATACAAAA+AGG + chr8.2:31048212-31048231 None:intergenic 25.0%
! CTTCAATGAATTCCATTATT+GGG + chr8.2:31050396-31050415 None:intergenic 25.0%
! GATATATGTGATGTTTGAAA+TGG - chr8.2:31048468-31048487 MS.gene066499:intron 25.0%
! GCAAAAGAAGAAACATATAA+TGG + chr8.2:31050555-31050574 None:intergenic 25.0%
! GTTAATGAGAAATCAATTCA+AGG - chr8.2:31050365-31050384 MS.gene066499:intron 25.0%
! TAAGTTCATATTTGACAGTT+CGG + chr8.2:31050248-31050267 None:intergenic 25.0%
! TAGCTAAATGTTAAGACTTT+GGG - chr8.2:31048969-31048988 MS.gene066499:intron 25.0%
! TCTTCAATGAATTCCATTAT+TGG + chr8.2:31050397-31050416 None:intergenic 25.0%
! TTGTTTATAATAGTGATTGG+AGG - chr8.2:31048386-31048405 MS.gene066499:intron 25.0%
!!! ATTTGTCAATGCATTTTGAT+TGG - chr8.2:31049324-31049343 MS.gene066499:intron 25.0%
!!! GAAGAACATTTTCAAGTTTT+AGG + chr8.2:31049392-31049411 None:intergenic 25.0%
!!! GAGGATGTTTTTTGTAATTT+TGG + chr8.2:31049960-31049979 None:intergenic 25.0%
!!! TCAATCAATAGTTTGTTAAG+AGG + chr8.2:31050983-31051002 None:intergenic 25.0%
!!! TCTGAGTTTCGATTTTAATT+TGG - chr8.2:31048944-31048963 MS.gene066499:intron 25.0%
AAATTTGCCACAGTTAGTTA+CGG + chr8.2:31050861-31050880 None:intergenic 30.0%
AACACAAGATGCAAAACTAT+AGG + chr8.2:31048568-31048587 None:intergenic 30.0%
AATGAGAAATCAATTCAAGG+AGG - chr8.2:31050368-31050387 MS.gene066499:intron 30.0%
AATGAGAAATGAATCTAGTG+TGG - chr8.2:31051147-31051166 MS.gene066499:CDS 30.0%
ACCAAGTGTTACCATTAAAA+AGG + chr8.2:31048836-31048855 None:intergenic 30.0%
AGCTAAATGTTAAGACTTTG+GGG - chr8.2:31048970-31048989 MS.gene066499:intron 30.0%
ATCAACCTATAATAGCTAAG+AGG + chr8.2:31048784-31048803 None:intergenic 30.0%
GAACTGTCAAATATGAACTT+AGG - chr8.2:31050247-31050266 MS.gene066499:intron 30.0%
GAAGAAACATATAATGGTCT+TGG + chr8.2:31050549-31050568 None:intergenic 30.0%
GATTCATTTCTCATTTCATC+AGG + chr8.2:31051142-31051161 None:intergenic 30.0%
GCAATTGTGCATCTATAAAT+AGG - chr8.2:31048869-31048888 MS.gene066499:intron 30.0%
TATGTCAGCTTGACATTAAA+TGG + chr8.2:31050435-31050454 None:intergenic 30.0%
TCGTATTAAATAGTGTAACG+CGG + chr8.2:31050744-31050763 None:intergenic 30.0%
TTAAGATATTCTCCAAATGC+AGG + chr8.2:31048541-31048560 None:intergenic 30.0%
! AACCAATCTTTGCATTTTGT+CGG - chr8.2:31050625-31050644 MS.gene066499:intron 30.0%
! ATGTTATTTACTCCCAAAGT+CGG - chr8.2:31049807-31049826 MS.gene066499:CDS 30.0%
! GATGTTTGAAATGGTGAAAT+TGG - chr8.2:31048477-31048496 MS.gene066499:intron 30.0%
! GTTTTGTATGCATTAATTGC+TGG - chr8.2:31048248-31048267 MS.gene066499:CDS 30.0%
! TAATTTTGAATGGATCGGAT+TGG - chr8.2:31048431-31048450 MS.gene066499:intron 30.0%
! TCCTTTTTAATGGTAACACT+TGG - chr8.2:31048832-31048851 MS.gene066499:intron 30.0%
! TGCGTTATGATCCTTTTTAA+TGG - chr8.2:31048822-31048841 MS.gene066499:intron 30.0%
! TTTTGGTCGTTAAATCTGTT+AGG + chr8.2:31050080-31050099 None:intergenic 30.0%
!!! AGGATGTATTTTTTGTGCAA+GGG - chr8.2:31048406-31048425 MS.gene066499:intron 30.0%
!!! GTCGCAAAAAACCATTTTTT+AGG - chr8.2:31048273-31048292 MS.gene066499:CDS 30.0%
!!! TCAATGCATTTTGATTGGTT+TGG - chr8.2:31049329-31049348 MS.gene066499:intron 30.0%
!!! TTGTAATTTTGGCTAATTCG+AGG + chr8.2:31049949-31049968 None:intergenic 30.0%
AAAAGTTGAAAAGGAGAGCA+AGG - chr8.2:31049520-31049539 MS.gene066499:CDS 35.0%
AAAATCGAAACTCAGAACCA+TGG + chr8.2:31048940-31048959 None:intergenic 35.0%
AACCGACAAAATGCAAAGAT+TGG + chr8.2:31050630-31050649 None:intergenic 35.0%
AAGCAACCTTAAAATCAAGG+TGG - chr8.2:31051189-31051208 MS.gene066499:CDS 35.0%
AGCAACCTTAAAATCAAGGT+GGG - chr8.2:31051190-31051209 MS.gene066499:CDS 35.0%
AGTAAATAACATATCCCCAG+TGG + chr8.2:31049799-31049818 None:intergenic 35.0%
AGTATCAAAAGCAAGCCAAA+CGG + chr8.2:31048139-31048158 None:intergenic 35.0%
AGTTTATAGTGAGCTGCATA+TGG - chr8.2:31048909-31048928 MS.gene066499:intron 35.0%
ATAACAATGACATGCAGAGA+CGG + chr8.2:31050717-31050736 None:intergenic 35.0%
ATAGATTTGTCTCTTTGCAG+AGG - chr8.2:31048729-31048748 MS.gene066499:intron 35.0%
ATCTCCCTGACTTTATTCAT+CGG + chr8.2:31049306-31049325 None:intergenic 35.0%
ATTGAAGATACCTGTGTTAC+CGG - chr8.2:31050409-31050428 MS.gene066499:intron 35.0%
GAAATGGTGAAATTGGTGAA+TGG - chr8.2:31048484-31048503 MS.gene066499:intron 35.0%
GATTGATGTTAGATGCAAAG+TGG - chr8.2:31049626-31049645 MS.gene066499:CDS 35.0%
GGATGGTCAGATATGTATAA+TGG - chr8.2:31048663-31048682 MS.gene066499:intron 35.0%
GGGTCATATGTTCATATGAA+AGG - chr8.2:31050119-31050138 MS.gene066499:CDS 35.0%
TAACGACCAAAATGAGTGTT+CGG - chr8.2:31050088-31050107 MS.gene066499:CDS 35.0%
TACATAGCTCAGAGGAAATT+GGG - chr8.2:31048096-31048115 MS.gene066499:CDS 35.0%
TCATATGAAAGGAAAGCTTC+TGG - chr8.2:31050130-31050149 MS.gene066499:intron 35.0%
TCGAAATGTGAATGTGGATT+TGG - chr8.2:31048511-31048530 MS.gene066499:CDS 35.0%
TCTTCCGATGAATAAAGTCA+GGG - chr8.2:31049299-31049318 MS.gene066499:intron 35.0%
TGAATCTAGTGTGGAAAAAG+TGG - chr8.2:31051156-31051175 MS.gene066499:CDS 35.0%
TGGAAAATTTAGCATATGCG+TGG - chr8.2:31048686-31048705 MS.gene066499:intron 35.0%
TGGTCAGATATGTATAATGG+TGG - chr8.2:31048666-31048685 MS.gene066499:intron 35.0%
TTGTATGCATTAATTGCTGG+TGG - chr8.2:31048251-31048270 MS.gene066499:CDS 35.0%
TTTAGCATATGCGTGGAATT+TGG - chr8.2:31048693-31048712 MS.gene066499:intron 35.0%
! AGTTTTGCATCTTGTGTTGT+TGG - chr8.2:31048570-31048589 MS.gene066499:intron 35.0%
! ATGTCTTGTTCTTCTTCATC+TGG - chr8.2:31047985-31048004 MS.gene066499:CDS 35.0%
! CAATATCCGAACACTCATTT+TGG + chr8.2:31050097-31050116 None:intergenic 35.0%
! GGGTGTAATTTTGAATGGAT+CGG - chr8.2:31048426-31048445 MS.gene066499:intron 35.0%
! TACGAAGTGTTCTCAAATAG+TGG - chr8.2:31050759-31050778 MS.gene066499:intron 35.0%
! TGGTTTGGATTACTTGCATA+GGG - chr8.2:31049344-31049363 MS.gene066499:intron 35.0%
! TGTCTTGTTCTTCTTCATCT+GGG - chr8.2:31047986-31048005 MS.gene066499:CDS 35.0%
! TTTAATGGTAACACTTGGTG+CGG - chr8.2:31048837-31048856 MS.gene066499:intron 35.0%
! TTTTGGTCCTTGAATGTGTT+AGG - chr8.2:31049908-31049927 MS.gene066499:CDS 35.0%
!! AGATGCAAAGTGGTTGATTT+TGG - chr8.2:31049636-31049655 MS.gene066499:CDS 35.0%
!! TGATTTTGGAAATGCGTGTT+GGG - chr8.2:31049650-31049669 MS.gene066499:CDS 35.0%
!! TGCAAGGGTGTAATTTTGAA+TGG - chr8.2:31048421-31048440 MS.gene066499:intron 35.0%
!! TTGATTTTGGAAATGCGTGT+TGG - chr8.2:31049649-31049668 MS.gene066499:CDS 35.0%
!! TTGGTTTGGATTACTTGCAT+AGG - chr8.2:31049343-31049362 MS.gene066499:intron 35.0%
!!! GAGGATGTATTTTTTGTGCA+AGG - chr8.2:31048405-31048424 MS.gene066499:intron 35.0%
AAGGATTTCTTCGACAGACA+CGG - chr8.2:31050923-31050942 MS.gene066499:intron 40.0%
AATGAGTGTTCGGATATTGC+AGG - chr8.2:31050098-31050117 MS.gene066499:CDS 40.0%
AGCAAAAGACCACATATCGA+CGG + chr8.2:31049757-31049776 None:intergenic 40.0%
AGCTGCATATGGAAATACCA+TGG - chr8.2:31048920-31048939 MS.gene066499:intron 40.0%
AGTGTGGAAAAAGTGGATGT+TGG - chr8.2:31051163-31051182 MS.gene066499:CDS 40.0%
AGTTACGGTGTAGTCAATCA+TGG + chr8.2:31050846-31050865 None:intergenic 40.0%
ATGAGTGTTCGGATATTGCA+GGG - chr8.2:31050099-31050118 MS.gene066499:CDS 40.0%
CTAAAACCTTGTCCGACTTT+GGG + chr8.2:31049822-31049841 None:intergenic 40.0%
GAAATTCGAGTACCATGCAT+TGG + chr8.2:31049233-31049252 None:intergenic 40.0%
GATTACTTGCATAGGGAACA+TGG - chr8.2:31049351-31049370 MS.gene066499:intron 40.0%
GCAACCTTAAAATCAAGGTG+GGG - chr8.2:31051191-31051210 MS.gene066499:CDS 40.0%
GCTTAAAGTGGTCGATCAAT+TGG + chr8.2:31049188-31049207 None:intergenic 40.0%
GGAAAACAAAAATTCCGCAC+AGG + chr8.2:31048997-31049016 None:intergenic 40.0%
GGATTGAGAACATACATCGT+TGG + chr8.2:31048163-31048182 None:intergenic 40.0%
GGATTTGGATTTCCTGCATT+TGG - chr8.2:31048526-31048545 MS.gene066499:CDS 40.0%
GGTCATTCGAAATGTGAATG+TGG - chr8.2:31048505-31048524 MS.gene066499:CDS 40.0%
GTACATAGCTCAGAGGAAAT+TGG - chr8.2:31048095-31048114 MS.gene066499:CDS 40.0%
GTCAGATACAACCGTTACAA+AGG - chr8.2:31049276-31049295 MS.gene066499:intron 40.0%
GTCTGAATTTCTTCCGCAAA+TGG + chr8.2:31049684-31049703 None:intergenic 40.0%
GTCTTCCGATGAATAAAGTC+AGG - chr8.2:31049298-31049317 MS.gene066499:intron 40.0%
GTGAGTTGTCTGATCTTGAT+TGG - chr8.2:31048642-31048661 MS.gene066499:intron 40.0%
GTTAGCACCTAACACATTCA+AGG + chr8.2:31049918-31049937 None:intergenic 40.0%
GTTCTTTCATCCATTGCTGA+TGG - chr8.2:31049135-31049154 MS.gene066499:intron 40.0%
GTTGTCTGATCTTGATTGGA+TGG - chr8.2:31048646-31048665 MS.gene066499:intron 40.0%
TCAGCTTGACATTAAATGGC+CGG + chr8.2:31050431-31050450 None:intergenic 40.0%
TCATCGGAAGACCTTTGTAA+CGG + chr8.2:31049290-31049309 None:intergenic 40.0%
TCTGGACAAAGAGCTTCTAT+GGG - chr8.2:31049561-31049580 MS.gene066499:CDS 40.0%
TGCATGGTACTCGAATTTCT+TGG - chr8.2:31049234-31049253 MS.gene066499:intron 40.0%
TTCTGGACAAAGAGCTTCTA+TGG - chr8.2:31049560-31049579 MS.gene066499:CDS 40.0%
TTGCGCCTCTTAGCTATTAT+AGG - chr8.2:31048776-31048795 MS.gene066499:intron 40.0%
TTTAAGCACACAGGTCCTAA+CGG - chr8.2:31049201-31049220 MS.gene066499:intron 40.0%
! ACTTCCCCACCTTGATTTTA+AGG + chr8.2:31051198-31051217 None:intergenic 40.0%
! ATGAAGGCTTTGATTCCTAC+CGG - chr8.2:31048022-31048041 MS.gene066499:CDS 40.0%
! GGATTCGGAGGCTAAAATTT+TGG - chr8.2:31050957-31050976 MS.gene066499:intron 40.0%
! TCTGGTTTCTACTATCGATC+CGG - chr8.2:31049410-31049429 MS.gene066499:CDS 40.0%
AAGAGCTTCTATGGGAGGAA+TGG - chr8.2:31049569-31049588 MS.gene066499:CDS 45.0%
ACGGGGATCTCAAAAGGATT+CGG - chr8.2:31050942-31050961 MS.gene066499:intron 45.0%
AGAGCTTCTATGGGAGGAAT+GGG - chr8.2:31049570-31049589 MS.gene066499:CDS 45.0%
AGCTCAGAGGAAATTGGGTT+GGG - chr8.2:31048101-31048120 MS.gene066499:CDS 45.0%
AGCTCCTGAAGTTATACTGC+AGG - chr8.2:31049716-31049735 MS.gene066499:CDS 45.0%
AGGATTTCTTCGACAGACAC+GGG - chr8.2:31050924-31050943 MS.gene066499:intron 45.0%
AGGCCTGAGGGAAACATAAA+CGG - chr8.2:31049474-31049493 MS.gene066499:CDS 45.0%
AGGGCGGTAGCTAAAATTTC+TGG - chr8.2:31049543-31049562 MS.gene066499:CDS 45.0%
AGTTGAAAAGGAGAGCAAGG+AGG - chr8.2:31049523-31049542 MS.gene066499:CDS 45.0%
ATCGACCACTTTAAGCACAC+AGG - chr8.2:31049192-31049211 MS.gene066499:intron 45.0%
ATGTTACAGGTTGCTACTGC+AGG - chr8.2:31050890-31050909 MS.gene066499:intron 45.0%
ATTCCTTCTCCGTCGATATG+TGG - chr8.2:31049745-31049764 MS.gene066499:CDS 45.0%
CATTAAATGGCCGGTAACAC+AGG + chr8.2:31050422-31050441 None:intergenic 45.0%
CCAAACTAACGAGACATTGG+AGG + chr8.2:31049979-31049998 None:intergenic 45.0%
CCTCCAATGTCTCGTTAGTT+TGG - chr8.2:31049976-31049995 MS.gene066499:CDS 45.0%
CTTTGTGAGTCTCTACACCT+CGG - chr8.2:31050587-31050606 MS.gene066499:intron 45.0%
GACTACACCGTAACTAACTG+TGG - chr8.2:31050851-31050870 MS.gene066499:intron 45.0%
GCTAAAACCTTGTCCGACTT+TGG + chr8.2:31049823-31049842 None:intergenic 45.0%
GGACCAAACTAACGAGACAT+TGG + chr8.2:31049982-31050001 None:intergenic 45.0%
GTCTCTTTGCAGAGGACTTA+AGG - chr8.2:31048737-31048756 MS.gene066499:intron 45.0%
GTGTCTGTCGAAGAAATCCT+TGG + chr8.2:31050924-31050943 None:intergenic 45.0%
GTTGAAAAGGAGAGCAAGGA+GGG - chr8.2:31049524-31049543 MS.gene066499:CDS 45.0%
TACTGCAGGAGTGAAATCCA+AGG - chr8.2:31050904-31050923 MS.gene066499:intron 45.0%
TAGCTCAGAGGAAATTGGGT+TGG - chr8.2:31048100-31048119 MS.gene066499:CDS 45.0%
TAGGACCTGTGTGCTTAAAG+TGG + chr8.2:31049200-31049219 None:intergenic 45.0%
TCCAAGGAGTTCCATCATCA+GGG + chr8.2:31050667-31050686 None:intergenic 45.0%
TCGGGTGCAAAATCAAGAAG+AGG + chr8.2:31051058-31051077 None:intergenic 45.0%
TTATCCTGACATGCTATCCG+AGG + chr8.2:31050607-31050626 None:intergenic 45.0%
TTCCAAGGAGTTCCATCATC+AGG + chr8.2:31050668-31050687 None:intergenic 45.0%
TTGGGCTGATAAGCCATTTG+CGG - chr8.2:31049668-31049687 MS.gene066499:CDS 45.0%
TTTACTCCCAAAGTCGGACA+AGG - chr8.2:31049813-31049832 MS.gene066499:CDS 45.0%
TTTGATTCCTACCGGAAAGG+TGG - chr8.2:31048030-31048049 MS.gene066499:CDS 45.0%
! AGTCCTTTTCCATGAGCCAA+GGG + chr8.2:31051114-31051133 None:intergenic 45.0%
! GGGTCTGAAGATGATGATGA+AGG - chr8.2:31048006-31048025 MS.gene066499:CDS 45.0%
!! AGGAAAGCTTCTGGAACAGT+TGG - chr8.2:31050139-31050158 MS.gene066499:intron 45.0%
!! CTTTGCATTTTGTCGGTTGC+AGG - chr8.2:31050632-31050651 MS.gene066499:intron 45.0%
!! TTCAAGGAGGCACCCAATAA+TGG - chr8.2:31050381-31050400 MS.gene066499:intron 45.0%
AACTCCTTGGAAAGATGCCC+CGG - chr8.2:31050676-31050695 MS.gene066499:intron 50.0%
AAGGTGGATACCATGCTGTC+CGG - chr8.2:31048046-31048065 MS.gene066499:CDS 50.0%
ACAATGACATGCAGAGACGG+TGG + chr8.2:31050714-31050733 None:intergenic 50.0%
ACACCCTTGGCTCATGGAAA+AGG - chr8.2:31051108-31051127 MS.gene066499:CDS 50.0%
ACAGACACGGGGATCTCAAA+AGG - chr8.2:31050936-31050955 MS.gene066499:intron 50.0%
AGACCACATATCGACGGAGA+AGG + chr8.2:31049751-31049770 None:intergenic 50.0%
ATGGTATCCACCTTTCCGGT+AGG + chr8.2:31048040-31048059 None:intergenic 50.0%
ATTGCTTTCGAGCTTGCCAC+TGG - chr8.2:31049780-31049799 MS.gene066499:CDS 50.0%
CAATGACATGCAGAGACGGT+GGG + chr8.2:31050713-31050732 None:intergenic 50.0%
CAGCATGGTATCCACCTTTC+CGG + chr8.2:31048044-31048063 None:intergenic 50.0%
CCAGCCTGCAGTATAACTTC+AGG + chr8.2:31049723-31049742 None:intergenic 50.0%
CCTGAAGTTATACTGCAGGC+TGG - chr8.2:31049720-31049739 MS.gene066499:CDS 50.0%
CTGAGCTATGTACCTTCCAC+CGG + chr8.2:31048088-31048107 None:intergenic 50.0%
GATCTAACAGGGTCTTTCGC+CGG + chr8.2:31049432-31049451 None:intergenic 50.0%
GCGAAAGACCCTGTTAGATC+GGG - chr8.2:31049432-31049451 MS.gene066499:CDS 50.0%
GGACAAAGAGCTTCTATGGG+AGG - chr8.2:31049564-31049583 MS.gene066499:CDS 50.0%
GGATTTCTTCGACAGACACG+GGG - chr8.2:31050925-31050944 MS.gene066499:intron 50.0%
GGCGAAAGACCCTGTTAGAT+CGG - chr8.2:31049431-31049450 MS.gene066499:CDS 50.0%
GGGATCTCAAAAGGATTCGG+AGG - chr8.2:31050945-31050964 MS.gene066499:intron 50.0%
TACACCTCGGATAGCATGTC+AGG - chr8.2:31050600-31050619 MS.gene066499:intron 50.0%
TGAGGGAAACATAAACGGCG+CGG - chr8.2:31049479-31049498 MS.gene066499:CDS 50.0%
TTCTGCAGTTGGTCGCTTCT+CGG + chr8.2:31051077-31051096 None:intergenic 50.0%
TTGCTTTCGAGCTTGCCACT+GGG - chr8.2:31049781-31049800 MS.gene066499:CDS 50.0%
TTTGCCACGCTGCAAAGCTA+TGG + chr8.2:31050796-31050815 None:intergenic 50.0%
! AAGTGCAGCGCAGTTTGTTC+AGG - chr8.2:31049092-31049111 MS.gene066499:intron 50.0%
! CAAACTGCGCTGCACTTTTC+TGG + chr8.2:31049089-31049108 None:intergenic 50.0%
! GAGTCCTTTTCCATGAGCCA+AGG + chr8.2:31051115-31051134 None:intergenic 50.0%
! GCTCAGAGGAAATTGGGTTG+GGG - chr8.2:31048102-31048121 MS.gene066499:CDS 50.0%
! GGCTTTGATTCCTACCGGAA+AGG - chr8.2:31048027-31048046 MS.gene066499:CDS 50.0%
! GGGGTCAGTTTTCAACCGTT+TGG - chr8.2:31048121-31048140 MS.gene066499:CDS 50.0%
! GTGGAAGGTACATAGCTCAG+AGG - chr8.2:31048088-31048107 MS.gene066499:CDS 50.0%
!! ACAAGGTTTTAGCGAGGACG+AGG - chr8.2:31049830-31049849 MS.gene066499:CDS 50.0%
!! AGTCGGACAAGGTTTTAGCG+AGG - chr8.2:31049824-31049843 MS.gene066499:CDS 50.0%
!! CCCTCAGGCCTCTCTAAAAT+CGG + chr8.2:31049465-31049484 None:intergenic 50.0%
!! CCGATTTTAGAGAGGCCTGA+GGG - chr8.2:31049462-31049481 MS.gene066499:CDS 50.0%
!! CCTCAGGCCTCTCTAAAATC+GGG + chr8.2:31049464-31049483 None:intergenic 50.0%
!! CTCAGGCCTCTCTAAAATCG+GGG + chr8.2:31049463-31049482 None:intergenic 50.0%
!! GAGTCTCCCCGATTTTAGAG+AGG - chr8.2:31049454-31049473 MS.gene066499:CDS 50.0%
!! TAAGACTTTGGGGTCCTGTG+CGG - chr8.2:31048980-31048999 MS.gene066499:intron 50.0%
AACAGTGCCTGCAACACCCT+TGG - chr8.2:31051095-31051114 MS.gene066499:CDS 55.0%
ACGGTGGGAACACTACCTTC+CGG + chr8.2:31050698-31050717 None:intergenic 55.0%
AGGTGGATACCATGCTGTCC+GGG - chr8.2:31048047-31048066 MS.gene066499:CDS 55.0%
GAAAAGGAGAGCAAGGAGGG+CGG - chr8.2:31049527-31049546 MS.gene066499:CDS 55.0%
GCGCCGTTTATGTTTCCCTC+AGG + chr8.2:31049480-31049499 None:intergenic 55.0%
GGAGTTCCATCATCAGGGCA+AGG + chr8.2:31050662-31050681 None:intergenic 55.0%
GGATCACCTTGCCCTGATGA+TGG - chr8.2:31050653-31050672 MS.gene066499:intron 55.0%
GGGAGACTCCCGATCTAACA+GGG + chr8.2:31049443-31049462 None:intergenic 55.0%
TAACGGCCAGCACCAATGCA+TGG - chr8.2:31049218-31049237 MS.gene066499:intron 55.0%
TCTGCAGTTGGTCGCTTCTC+GGG + chr8.2:31051076-31051095 None:intergenic 55.0%
TGCTTTCGAGCTTGCCACTG+GGG - chr8.2:31049782-31049801 MS.gene066499:CDS 55.0%
! AGCACCATAGCTTTGCAGCG+TGG - chr8.2:31050789-31050808 MS.gene066499:intron 55.0%
! CGAGTACCATGCATTGGTGC+TGG + chr8.2:31049227-31049246 None:intergenic 55.0%
! TGCAGGCACTGTTCTGCAGT+TGG + chr8.2:31051088-31051107 None:intergenic 55.0%
!! ATGCATTGGTGCTGGCCGTT+AGG + chr8.2:31049219-31049238 None:intergenic 55.0%
!! CCCGATTTTAGAGAGGCCTG+AGG - chr8.2:31049461-31049480 MS.gene066499:CDS 55.0%
!! GCCCTGATGATGGAACTCCT+TGG - chr8.2:31050663-31050682 MS.gene066499:intron 55.0%
CCTGCAACACCCTTGGCTCA+TGG - chr8.2:31051102-31051121 MS.gene066499:CDS 60.0%
CCTTGGAAAGATGCCCCGGA+AGG - chr8.2:31050680-31050699 MS.gene066499:intron 60.0%
CGGTGGGAACACTACCTTCC+GGG + chr8.2:31050697-31050716 None:intergenic 60.0%
GGATACCATGCTGTCCGGGT+CGG - chr8.2:31048051-31048070 MS.gene066499:CDS 60.0%
GGGGAGACTCCCGATCTAAC+AGG + chr8.2:31049444-31049463 None:intergenic 60.0%
GGTGGGAACACTACCTTCCG+GGG + chr8.2:31050696-31050715 None:intergenic 60.0%
GTGATCAGTTCGCCGGTGGA+AGG - chr8.2:31048073-31048092 MS.gene066499:CDS 60.0%
! CCTTCCGGGGCATCTTTCCA+AGG + chr8.2:31050683-31050702 None:intergenic 60.0%
!! CCATGAGCCAAGGGTGTTGC+AGG + chr8.2:31051105-31051124 None:intergenic 60.0%
!! TGAAGGGGCGCCATCAGCAA+TGG + chr8.2:31049148-31049167 None:intergenic 60.0%
CGGCGAACTGATCACCGACC+CGG + chr8.2:31048068-31048087 None:intergenic 65.0%
CGGGTCGGTGATCAGTTCGC+CGG - chr8.2:31048066-31048085 MS.gene066499:CDS 65.0%
GATCACCGACCCGGACAGCA+TGG + chr8.2:31048059-31048078 None:intergenic 65.0%
GTCGGTGATCAGTTCGCCGG+TGG - chr8.2:31048069-31048088 MS.gene066499:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 31047985 31051219 31047985 ID=MS.gene066499
chr8.2 mRNA 31047985 31051219 31047985 ID=MS.gene066499.t1;Parent=MS.gene066499
chr8.2 exon 31051037 31051219 31051037 ID=MS.gene066499.t1.exon1;Parent=MS.gene066499.t1
chr8.2 CDS 31051037 31051219 31051037 ID=cds.MS.gene066499.t1;Parent=MS.gene066499.t1
chr8.2 exon 31049353 31050138 31049353 ID=MS.gene066499.t1.exon2;Parent=MS.gene066499.t1
chr8.2 CDS 31049353 31050138 31049353 ID=cds.MS.gene066499.t1;Parent=MS.gene066499.t1
chr8.2 exon 31048503 31048550 31048503 ID=MS.gene066499.t1.exon3;Parent=MS.gene066499.t1
chr8.2 CDS 31048503 31048550 31048503 ID=cds.MS.gene066499.t1;Parent=MS.gene066499.t1
chr8.2 exon 31047985 31048305 31047985 ID=MS.gene066499.t1.exon4;Parent=MS.gene066499.t1
chr8.2 CDS 31047985 31048305 31047985 ID=cds.MS.gene066499.t1;Parent=MS.gene066499.t1
Gene Sequence

>MS.gene066499

ATGTCTTGTTCTTCTTCATCTGGGTCTGAAGATGATGATGAAGGCTTTGATTCCTACCGGAAAGGTGGATACCATGCTGTCCGGGTCGGTGATCAGTTCGCCGGTGGAAGGTACATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTTTCAACCGTTTGGCTTGCTTTTGATACTACCAACGATGTATGTTCTCAATCCTAAAGATAAAGATTTGTTTTGAATACCCTTTTTGTATTATTGCAATCTGTTTTGAATCTTGCTTTGTTTTGTATGCATTAATTGCTGGTGGTCGCAAAAAACCATTTTTTAGGTTCATTGAATAACTGAATAACATATGTATTTTGTAAATATTATAGATCAGATACATCAATTATACAGTAAACTTAAAAAGTTATTATTTTTTGTTTATAATAGTGATTGGAGGATGTATTTTTTGTGCAAGGGTGTAATTTTGAATGGATCGGATTGGTATGATTTGAATTTGATATATGTGATGTTTGAAATGGTGAAATTGGTGAATGGTCATTCGAAATGTGAATGTGGATTTGGATTTCCTGCATTTGGAGAATATCTTAAAGTTCCTATAGTTTTGCATCTTGTGTTGTTGGATCTATATTTTAATTCAGTACTTTGTACCGTATTTATCGATTTGAAAATGTGAGTTGTCTGATCTTGATTGGATGGTCAGATATGTATAATGGTGGAAAATTTAGCATATGCGTGGAATTTGGATTTCTTGATTGCATAGATTTGTCTCTTTGCAGAGGACTTAAGGAGTGATAAATGTGTTTTTGCGCCTCTTAGCTATTATAGGTTGATAATGATTGGGTAATCTCGTGCGTTATGATCCTTTTTAATGGTAACACTTGGTGCGGTTTGTGTGAGCAATTGTGCATCTATAAATAGGTGTTAATTTTGTTGGACAGTTTATAGTGAGCTGCATATGGAAATACCATGGTTCTGAGTTTCGATTTTAATTTGGCATAGCTAAATGTTAAGACTTTGGGGTCCTGTGCGGAATTTTTGTTTTCCTTTTATTTCTTGTCAAATATCTTTCTGATTTTATGTTTGTGATTTTCAGACATATGTTGCTCTGAAGATCCAGAAAAGTGCAGCGCAGTTTGTTCAGGCTGCTCTTCACGAGATAGATGTTCTTTCATCCATTGCTGATGGCGCCCCTTCAAATTCAAAATTTGTTGTCCAATTGATCGACCACTTTAAGCACACAGGTCCTAACGGCCAGCACCAATGCATGGTACTCGAATTTCTTGGAGATAGCTTGCTACGTCTAGTCAGATACAACCGTTACAAAGGTCTTCCGATGAATAAAGTCAGGGAGATTTGTCAATGCATTTTGATTGGTTTGGATTACTTGCATAGGGAACATGGTATTATACACACAGACCTAAAACTTGAAAATGTTCTTCTGGTTTCTACTATCGATCCGGCGAAAGACCCTGTTAGATCGGGAGTCTCCCCGATTTTAGAGAGGCCTGAGGGAAACATAAACGGCGCGGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCGGTAGCTAAAATTTCTGGACAAAGAGCTTCTATGGGAGGAATGGGAGAAGCTCCAAATTCTGATAGAAATATTGATGGGATTGATGTTAGATGCAAAGTGGTTGATTTTGGAAATGCGTGTTGGGCTGATAAGCCATTTGCGGAAGAAATTCAGACACGACAGTATAGAGCTCCTGAAGTTATACTGCAGGCTGGTTATTCCTTCTCCGTCGATATGTGGTCTTTTGCTTGTATTGCTTTCGAGCTTGCCACTGGGGATATGTTATTTACTCCCAAAGTCGGACAAGGTTTTAGCGAGGACGAGGTATGATTGTTAGTTTGTATGCTATTGCTATTTAAATGTTATTGAATAAACAGTCATTTTGGTCCTTGAATGTGTTAGGTGCTAACGTTATAGTCCTCGAATTAGCCAAAATTACAAAAAACATCCTCCAATGTCTCGTTAGTTTGGTCCATCAAATTACTAACAGAAGATACACACAAAGATGTTTTTGTAATTTCAACATGTTTAAGAACATTAGTGACACTGCCTAACAGATTTAACGACCAAAATGAGTGTTCGGATATTGCAGGGTCATATGTTCATATGAAAGGAAAGCTTCTGGAACAGTTGGAACAGTTTAAAACTGTCATCTAAGAATTCCTAACTATACATGATATAATAGATTATTAGATCACATTTCTGTCAACAGAAAAGCCGAACTGTCAAATATGAACTTAGGATTTTTAACTATCATAGATGATTGCTCAAAAAAAATAAAAATATCATAGATGCATTTATAATAGTTGTTACTTTATTGAGGAATATGTGAATGATGTTAATGAGAAATCAATTCAAGGAGGCACCCAATAATGGAATTCATTGAAGATACCTGTGTTACCGGCCATTTAATGTCAAGCTGACATATATCTATGAATTCTATCTAACACTAAAGTTCTTTTCATTTGACTTCAGAATATAGTTTTGAATCTTTGATTGGACTTTACATAATATAGTACCAAGACCATTATATGTTTCTTCTTTTGCTTGTTTCTGATGCTTTGTGAGTCTCTACACCTCGGATAGCATGTCAGGATAACCAATCTTTGCATTTTGTCGGTTGCAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTAGTGTTCCCACCGTCTCTGCATGTCATTGTTATTGTTCCGCGTTACACTATTTAATACGAAGTGTTCTCAAATAGTGGCTTTAGCAGCACCATAGCTTTGCAGCGTGGCAAAATTTAACAAATTGATATTTTCTGCAATCCATGATTGACTACACCGTAACTAACTGTGGCAAATTTAATACTTGCATGTTACAGGTTGCTACTGCAGGAGTGAAATCCAAGGATTTCTTCGACAGACACGGGGATCTCAAAAGGATTCGGAGGCTAAAATTTTGGCCTCTTAACAAACTATTGATTGAAAGATACAAATTATCAGAGAGTGATGCTCATGAATTTTCAGAGTTTCTTTTACCTCTTCTTGATTTTGCACCCGAGAAGCGACCAACTGCAGAACAGTGCCTGCAACACCCTTGGCTCATGGAAAAGGACTCTGTTCCTGATGAAATGAGAAATGAATCTAGTGTGGAAAAAGTGGATGTTGGAATAAGCAACCTTAAAATCAAGGTGGGGAAGTGA
Protein sequence

>MS.gene066499.t1

MSCSSSSGSEDDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAFDTTNDTYVALKIQKSAAQFVQAALHEIDVLSSIADGAPSNSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLVRYNRYKGLPMNKVREICQCILIGLDYLHREHGIIHTDLKLENVLLVSTIDPAKDPVRSGVSPILERPEGNINGAVTSLIEKKLKRRARRAVAKISGQRASMGGMGEAPNSDRNIDGIDVRCKVVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVATAGVKSKDFFDRHGDLKRIRRLKFWPLNKLLIERYKLSESDAHEFSEFLLPLLDFAPEKRPTAEQCLQHPWLMEKDSVPDEMRNESSVEKVDVGISNLKIKVGK