AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27974

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27974.t1 MTR_8g089420 93.737 463 13 6 1 454 1 456 0.0 846
MS.gene27974.t1 MTR_2g018990 73.662 467 96 10 1 453 1 454 0.0 656
MS.gene27974.t1 MTR_4g113790 51.515 396 168 6 52 424 66 460 4.55e-138 405
MS.gene27974.t1 MTR_2g027240 51.282 390 163 8 52 421 179 561 5.38e-132 394
MS.gene27974.t1 MTR_1g060790 50.521 384 169 7 52 421 445 821 6.90e-128 391
MS.gene27974.t1 MTR_3g010260 50.000 390 170 8 52 424 390 771 2.43e-124 380
MS.gene27974.t1 MTR_8g006870 50.781 384 166 7 52 420 345 720 2.85e-124 379
MS.gene27974.t1 MTR_6g004720 47.775 427 196 7 12 421 185 601 3.99e-123 372
MS.gene27974.t1 MTR_7g081665 47.700 413 188 7 52 444 339 743 6.12e-123 375
MS.gene27974.t1 MTR_7g033640 49.744 390 169 7 52 421 207 589 8.34e-123 371
MS.gene27974.t1 MTR_7g104180 46.763 417 200 8 52 453 467 876 1.64e-122 377
MS.gene27974.t1 MTR_2g062850 48.196 388 179 5 48 421 141 520 6.34e-121 364
MS.gene27974.t1 MTR_2g069990 49.866 373 167 8 52 422 67 421 1.21e-119 358
MS.gene27974.t1 MTR_8g446990 48.446 386 177 8 51 421 105 483 2.00e-115 349
MS.gene27974.t1 MTR_2g085065 47.326 374 175 7 56 413 66 433 1.67e-106 324
MS.gene27974.t1 MTR_8g070530 43.377 385 176 8 40 421 560 905 1.27e-99 319
MS.gene27974.t1 MTR_2g095980 40.921 369 188 6 52 420 346 684 8.26e-88 283
MS.gene27974.t1 MTR_2g095980 40.921 369 188 6 52 420 601 939 4.69e-86 283
MS.gene27974.t1 MTR_2g095980 40.921 369 188 6 52 420 601 939 6.28e-86 283
MS.gene27974.t1 MTR_4g061610 40.214 373 171 9 52 420 619 943 2.32e-80 268
MS.gene27974.t1 MTR_4g065080 36.973 403 215 11 75 454 10 396 1.10e-72 235
MS.gene27974.t1 MTR_8g011780 37.569 362 204 8 71 421 11 361 3.05e-71 231
MS.gene27974.t1 MTR_7g053200 35.433 381 214 9 73 434 6 373 1.32e-70 230
MS.gene27974.t1 MTR_2g098240 36.571 350 191 8 75 421 12 333 6.77e-69 224
MS.gene27974.t1 MTR_6g470940 32.732 388 224 8 58 444 855 1206 9.02e-52 188
MS.gene27974.t1 MTR_4g035835 34.421 337 185 8 72 408 751 1051 3.73e-50 184
MS.gene27974.t1 MTR_5g069000 34.125 337 186 8 72 408 755 1055 6.79e-50 183
MS.gene27974.t1 MTR_7g073520 30.226 354 172 8 75 422 143 427 1.34e-45 165
MS.gene27974.t1 MTR_1g075880 32.277 347 203 11 79 420 116 435 1.65e-45 166
MS.gene27974.t1 MTR_1g069735 31.161 353 213 10 71 421 111 435 7.15e-45 163
MS.gene27974.t1 MTR_1g069735 31.161 353 213 10 71 421 111 435 1.16e-44 162
MS.gene27974.t1 MTR_1g069735 31.161 353 213 10 71 421 111 435 3.38e-44 163
MS.gene27974.t1 MTR_7g097150 29.873 395 234 13 59 442 97 459 2.06e-43 160
MS.gene27974.t1 MTR_1g090917 31.139 395 201 10 54 443 32 360 2.59e-43 159
MS.gene27974.t1 MTR_1g090917 32.000 375 184 10 54 423 32 340 1.24e-42 157
MS.gene27974.t1 MTR_3g104700 31.034 348 201 11 71 407 85 404 3.34e-42 156
MS.gene27974.t1 MTR_2g040150 31.412 347 201 11 71 407 104 423 1.22e-41 155
MS.gene27974.t1 MTR_1g019340 29.243 383 235 13 42 421 76 425 4.45e-41 152
MS.gene27974.t1 MTR_1g019340 29.243 383 235 13 42 421 76 425 1.58e-40 152
MS.gene27974.t1 MTR_1g442790 30.226 354 219 10 70 421 100 427 3.47e-40 151
MS.gene27974.t1 MTR_1g442790 30.226 354 219 10 70 421 100 427 3.58e-40 151
MS.gene27974.t1 MTR_1g042700 29.775 356 217 11 70 421 105 431 4.98e-40 150
MS.gene27974.t1 MTR_3g104700 29.315 365 202 11 71 407 85 421 1.14e-38 147
MS.gene27974.t1 MTR_1g090917 32.180 289 135 8 158 441 1 233 1.58e-28 115
MS.gene27974.t1 MTR_1g090917 31.399 293 134 8 158 448 1 228 9.11e-28 114
MS.gene27974.t1 MTR_3g110405 26.254 339 178 7 52 389 10 277 1.32e-26 109
MS.gene27974.t1 MTR_2g020380 29.260 311 151 7 80 389 4 246 6.22e-26 112
MS.gene27974.t1 MTR_4g107280 35.897 156 94 2 79 230 88 241 1.14e-24 105
MS.gene27974.t1 MTR_4g107280 41.739 115 61 2 295 408 247 356 7.46e-21 94.7
MS.gene27974.t1 MTR_8g040300 29.154 319 155 10 76 393 6 254 4.42e-24 101
MS.gene27974.t1 MTR_4g029020 25.691 362 189 11 69 422 1 290 3.63e-23 102
MS.gene27974.t1 MTR_3g099920 26.437 348 169 11 77 418 16 282 1.56e-22 100
MS.gene27974.t1 MTR_4g131060 27.987 318 161 8 73 389 11 261 1.93e-22 99.8
MS.gene27974.t1 MTR_4g006970 24.189 339 185 9 68 405 8 275 1.31e-21 97.4
MS.gene27974.t1 MTR_5g088350 26.688 311 161 8 80 389 13 257 1.92e-21 95.5
MS.gene27974.t1 MTR_2g049790 25.994 327 171 8 80 405 23 279 4.97e-21 95.5
MS.gene27974.t1 MTR_5g088350 26.688 311 161 8 80 389 13 257 5.72e-21 95.1
MS.gene27974.t1 MTR_4g107280 41.739 115 61 2 295 408 208 317 8.26e-21 94.4
MS.gene27974.t1 MTR_4g107280 30.128 156 64 4 79 230 88 202 3.20e-14 74.3
MS.gene27974.t1 MTR_5g088350 26.367 311 162 8 80 389 13 257 1.70e-20 94.0
MS.gene27974.t1 MTR_7g072575 26.567 335 174 10 72 405 4 267 3.85e-20 92.8
MS.gene27974.t1 MTR_8g095440 26.176 340 167 11 80 410 30 294 1.33e-19 90.9
MS.gene27974.t1 MTR_3g466400 26.444 329 166 10 80 405 14 269 2.54e-19 90.5
MS.gene27974.t1 MTR_6g012990 25.364 343 179 10 77 418 16 282 4.51e-19 89.0
MS.gene27974.t1 MTR_8g095440 26.176 340 167 11 80 410 30 294 6.01e-19 89.7
MS.gene27974.t1 MTR_6g012990 25.364 343 179 10 77 418 16 282 9.24e-19 89.0
MS.gene27974.t1 MTR_3g098090 27.900 319 150 12 80 389 32 279 9.99e-19 89.0
MS.gene27974.t1 MTR_6g006770 27.485 342 171 14 71 405 7 278 1.26e-18 89.0
MS.gene27974.t1 MTR_2g100030 27.003 337 186 9 80 405 18 305 1.79e-18 88.2
MS.gene27974.t1 MTR_6g048250 24.924 329 173 9 77 404 16 271 2.05e-18 86.7
MS.gene27974.t1 MTR_8g086380 25.559 313 162 8 80 389 26 270 2.09e-18 87.8
MS.gene27974.t1 MTR_4g005730 28.571 343 148 14 80 405 24 286 3.69e-18 87.8
MS.gene27974.t1 MTR_6g048250 24.924 329 173 9 77 404 16 271 3.83e-18 86.7
MS.gene27974.t1 MTR_6g048250 24.924 329 173 9 77 404 16 271 4.91e-18 87.0
MS.gene27974.t1 MTR_2g045470 24.841 314 163 10 80 389 20 264 8.46e-18 85.9
MS.gene27974.t1 MTR_1g076370 24.451 319 160 10 80 389 20 266 9.96e-18 85.5
MS.gene27974.t1 MTR_4g005730 27.778 342 152 14 80 405 24 286 4.64e-17 84.3
MS.gene27974.t1 MTR_3g088715 39.252 107 56 3 300 405 28 126 4.82e-17 77.8
MS.gene27974.t1 MTR_4g005730 27.778 342 152 14 80 405 24 286 5.14e-17 84.3
MS.gene27974.t1 MTR_3g072320 23.529 323 177 6 72 393 4 257 8.35e-17 82.8
MS.gene27974.t1 MTR_1g081000 23.962 313 170 8 77 388 1 246 1.53e-16 82.4
MS.gene27974.t1 MTR_5g067150 32.895 152 95 4 80 230 9 154 1.74e-16 81.6
MS.gene27974.t1 MTR_1g081000 23.962 313 170 8 77 388 1 246 1.78e-16 82.4
MS.gene27974.t1 MTR_5g067150 32.895 152 95 4 80 230 9 154 1.94e-16 81.3
MS.gene27974.t1 MTR_5g067150 32.895 152 95 4 80 230 9 154 2.16e-16 80.9
MS.gene27974.t1 MTR_7g095450 23.323 313 172 9 77 388 1 246 2.98e-16 81.6
MS.gene27974.t1 MTR_8g035890 25.382 327 161 10 70 389 6 256 6.09e-16 78.2
MS.gene27974.t1 MTR_3g466480 24.522 314 169 8 77 389 18 264 6.84e-16 80.1
MS.gene27974.t1 MTR_4g128820 33.113 151 96 2 80 230 10 155 6.85e-16 80.1
MS.gene27974.t1 MTR_3g051770 24.804 383 187 17 42 408 49 346 7.17e-16 80.1
MS.gene27974.t1 MTR_8g024590 23.926 326 177 11 80 405 17 271 9.74e-16 79.3
MS.gene27974.t1 MTR_2g016340 23.125 320 176 8 72 389 4 255 1.25e-15 79.3
MS.gene27974.t1 MTR_2g105010 23.750 320 176 8 71 389 5 257 1.30e-15 79.0
MS.gene27974.t1 MTR_5g075060 23.754 341 174 11 73 405 5 267 2.73e-15 78.2
MS.gene27974.t1 MTR_6g087000 34.884 129 73 4 297 420 912 1034 3.02e-15 79.0
MS.gene27974.t1 MTR_8g024600 24.194 310 168 10 80 389 17 259 1.53e-14 75.9
MS.gene27974.t1 MTR_1g103760 24.478 335 176 12 84 414 16 277 1.66e-14 75.9
MS.gene27974.t1 MTR_1g101630 27.119 177 119 5 59 230 19 190 8.19e-14 73.9
MS.gene27974.t1 MTR_5g045190 21.713 327 184 9 80 405 239 494 8.30e-14 74.3
MS.gene27974.t1 MTR_1g080020 31.544 149 95 3 80 227 9 151 9.68e-14 71.6
MS.gene27974.t1 MTR_4g114670 22.630 327 180 9 80 405 11 265 1.32e-13 72.4
MS.gene27974.t1 MTR_3g099767 30.526 190 119 4 43 231 75 252 1.69e-13 72.8
MS.gene27974.t1 MTR_4g114670 22.630 327 180 9 80 405 11 265 1.75e-13 72.4
MS.gene27974.t1 MTR_4g123940 25.148 338 171 10 80 410 26 288 2.24e-13 71.6
MS.gene27974.t1 MTR_7g116390 31.875 160 97 5 72 227 8 159 2.43e-13 70.9
MS.gene27974.t1 MTR_3g095620 34.211 152 85 5 85 230 30 172 2.74e-13 70.5
MS.gene27974.t1 MTR_4g123940 25.148 338 171 10 80 410 26 288 3.74e-13 71.6
MS.gene27974.t1 MTR_1g040875 24.528 318 159 10 80 389 24 268 4.06e-13 71.2
MS.gene27974.t1 MTR_4g019410 29.448 163 102 5 79 237 18 171 4.12e-13 71.6
MS.gene27974.t1 MTR_7g113490 31.293 147 97 2 86 230 74 218 4.51e-13 71.6
MS.gene27974.t1 MTR_1g096490 32.099 162 96 6 77 231 26 180 4.58e-13 71.2
MS.gene27974.t1 MTR_4g019410 29.448 163 102 5 79 237 18 171 6.25e-13 71.2
MS.gene27974.t1 MTR_2g013900 28.205 156 94 4 116 271 211 348 8.27e-13 70.5
MS.gene27974.t1 MTR_1g105290 32.215 149 93 3 86 230 61 205 3.35e-12 68.9
MS.gene27974.t1 MTR_1g105290 32.215 149 93 3 86 230 61 205 4.06e-12 68.6
MS.gene27974.t1 MTR_4g088745 28.369 141 97 2 131 271 95 231 4.42e-12 67.8
MS.gene27974.t1 MTR_1g048630 32.237 152 96 5 76 227 3 147 4.52e-12 68.9
MS.gene27974.t1 MTR_4g088755 28.369 141 97 2 131 271 90 226 4.70e-12 67.4
MS.gene27974.t1 MTR_1g105290 32.215 149 93 3 86 230 61 205 6.01e-12 67.8
MS.gene27974.t1 MTR_4g051648 25.658 152 108 3 80 230 8 155 6.62e-12 68.6
MS.gene27974.t1 MTR_5g075100 29.814 161 106 4 77 236 20 174 1.35e-11 66.6
MS.gene27974.t1 MTR_3g034100 23.718 156 117 1 75 230 77 230 1.43e-11 66.2
MS.gene27974.t1 MTR_8g024100 29.710 138 91 3 79 216 14 145 1.54e-11 67.0
MS.gene27974.t1 MTR_7g092360 25.161 155 111 3 77 230 13 163 1.94e-11 66.6
MS.gene27974.t1 MTR_4g088750 26.950 141 99 2 131 271 251 387 5.49e-11 65.1
MS.gene27974.t1 MTR_1g013700 24.615 195 134 4 72 263 5 189 6.44e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27974.t1 AT2G34650 65.646 457 122 11 8 453 6 438 0.0 581
MS.gene27974.t1 AT5G47750 50.718 418 172 10 52 449 164 567 1.74e-133 397
MS.gene27974.t1 AT2G26700 46.429 476 186 10 8 421 14 482 1.11e-131 390
MS.gene27974.t1 AT4G26610 48.104 422 183 7 15 421 73 473 3.12e-131 389
MS.gene27974.t1 AT5G40030 47.087 412 196 7 52 451 86 487 8.52e-131 387
MS.gene27974.t1 AT5G55910 50.129 389 168 8 52 421 82 463 5.67e-129 382
MS.gene27974.t1 AT5G55910 50.129 389 168 8 52 421 82 463 5.67e-129 382
MS.gene27974.t1 AT3G52890 49.873 395 164 7 52 421 511 896 3.13e-122 378
MS.gene27974.t1 AT3G52890 49.873 395 164 7 52 421 511 896 3.13e-122 378
MS.gene27974.t1 AT3G52890 49.873 395 164 7 52 421 511 896 3.13e-122 378
MS.gene27974.t1 AT3G52890 49.873 395 164 7 52 421 511 896 3.13e-122 378
MS.gene27974.t1 AT5G03640 45.814 430 201 8 14 421 476 895 7.85e-121 374
MS.gene27974.t1 AT5G03640 45.814 430 201 8 14 421 476 895 7.85e-121 374
MS.gene27974.t1 AT1G79250 47.711 415 184 8 52 441 119 525 1.01e-120 363
MS.gene27974.t1 AT1G79250 47.711 415 184 8 52 441 119 525 1.01e-120 363
MS.gene27974.t1 AT1G79250 47.711 415 184 8 52 441 119 525 1.01e-120 363
MS.gene27974.t1 AT1G79250 47.711 415 184 8 52 441 119 525 1.01e-120 363
MS.gene27974.t1 AT3G12690 46.875 416 192 9 45 443 151 554 6.88e-120 362
MS.gene27974.t1 AT3G12690 46.875 416 192 9 45 443 151 554 6.88e-120 362
MS.gene27974.t1 AT3G12690 46.875 416 192 9 45 443 151 554 6.88e-120 362
MS.gene27974.t1 AT1G16440 48.800 375 180 5 52 421 86 453 7.93e-119 357
MS.gene27974.t1 AT3G27580 48.267 404 184 9 50 434 151 548 9.44e-119 359
MS.gene27974.t1 AT3G27580 48.267 404 184 9 50 434 151 548 9.44e-119 359
MS.gene27974.t1 AT2G36350 48.214 392 173 7 52 421 532 915 2.56e-118 368
MS.gene27974.t1 AT2G44830 47.529 425 183 11 52 449 336 747 9.80e-118 362
MS.gene27974.t1 AT2G44830 47.529 425 183 11 52 449 336 747 9.80e-118 362
MS.gene27974.t1 AT2G44830 47.529 425 183 11 52 449 336 747 9.80e-118 362
MS.gene27974.t1 AT1G53700 48.257 373 175 7 54 425 66 421 9.48e-114 343
MS.gene27974.t1 AT3G14370 47.297 370 172 6 54 419 61 411 9.91e-110 333
MS.gene27974.t1 AT3G44610 47.486 358 148 9 85 412 74 421 1.48e-102 313
MS.gene27974.t1 AT5G58140 42.623 366 172 6 53 418 551 878 5.78e-97 311
MS.gene27974.t1 AT5G58140 42.623 366 172 6 53 418 551 878 5.78e-97 311
MS.gene27974.t1 AT5G58140 42.623 366 172 6 53 418 551 878 5.78e-97 311
MS.gene27974.t1 AT5G58140 42.623 366 172 6 53 418 551 878 5.78e-97 311
MS.gene27974.t1 AT5G58140 42.623 366 172 6 53 418 551 878 5.78e-97 311
MS.gene27974.t1 AT5G58140 42.659 361 169 6 53 413 551 873 7.93e-95 305
MS.gene27974.t1 AT3G45780 42.005 369 178 6 52 420 636 968 1.11e-85 283
MS.gene27974.t1 AT3G45780 42.005 369 178 6 52 420 636 968 1.11e-85 283
MS.gene27974.t1 AT1G51170 37.912 364 187 10 75 421 17 358 6.44e-68 222
MS.gene27974.t1 AT3G25250 35.912 362 201 10 70 421 7 347 1.24e-67 222
MS.gene27974.t1 AT3G20830 37.784 352 190 8 83 421 24 359 4.31e-64 213
MS.gene27974.t1 AT4G13000 34.943 352 200 8 75 422 15 341 5.50e-61 203
MS.gene27974.t1 AT1G48490 32.804 378 213 7 58 435 806 1142 2.46e-52 190
MS.gene27974.t1 AT1G48490 32.804 378 213 7 58 435 806 1142 2.46e-52 190
MS.gene27974.t1 AT1G48490 32.804 378 213 7 58 435 806 1142 2.46e-52 190
MS.gene27974.t1 AT1G48490 32.804 378 213 7 58 435 807 1143 2.53e-52 190
MS.gene27974.t1 AT3G17850 32.727 385 222 8 58 441 860 1208 2.68e-51 187
MS.gene27974.t1 AT5G62310 33.333 363 206 9 70 432 744 1070 4.43e-50 183
MS.gene27974.t1 AT1G45160 32.884 371 210 8 72 442 662 993 6.07e-49 180
MS.gene27974.t1 AT1G45160 32.884 371 210 8 72 442 662 993 8.85e-49 179
MS.gene27974.t1 AT3G08720 32.958 355 164 9 73 426 133 414 1.19e-48 173
MS.gene27974.t1 AT3G08720 32.958 355 164 9 73 426 133 414 1.19e-48 173
MS.gene27974.t1 AT3G08720 32.958 355 164 9 73 426 133 414 1.19e-48 173
MS.gene27974.t1 AT3G08720 32.958 355 164 9 73 426 133 414 1.19e-48 173
MS.gene27974.t1 AT3G10540 30.978 368 186 9 55 420 27 328 2.10e-48 173
MS.gene27974.t1 AT3G08730 31.250 368 177 11 63 424 117 414 4.33e-48 171
MS.gene27974.t1 AT3G08730 31.250 368 177 11 63 424 117 414 4.33e-48 171
MS.gene27974.t1 AT5G04510 30.933 375 197 10 49 420 12 327 1.53e-46 166
MS.gene27974.t1 AT4G33080 31.805 349 198 11 71 407 85 405 2.97e-46 167
MS.gene27974.t1 AT4G33080 31.805 349 198 11 71 407 85 405 3.97e-46 167
MS.gene27974.t1 AT5G04510 30.933 375 197 10 49 420 12 327 8.78e-46 166
MS.gene27974.t1 AT1G30640 30.986 355 216 11 71 421 18 347 3.56e-42 155
MS.gene27974.t1 AT4G14350 30.508 354 217 10 70 421 109 435 4.41e-42 157
MS.gene27974.t1 AT4G14350 30.508 354 217 10 70 421 109 435 6.58e-42 156
MS.gene27974.t1 AT4G14350 30.508 354 217 10 70 421 109 435 6.58e-42 156
MS.gene27974.t1 AT4G14350 30.508 354 217 10 70 421 109 435 6.58e-42 156
MS.gene27974.t1 AT1G30640 30.986 355 216 11 71 421 111 440 1.33e-41 155
MS.gene27974.t1 AT1G30640 30.986 355 216 11 71 421 111 440 1.33e-41 155
MS.gene27974.t1 AT2G20470 31.844 358 203 10 71 421 115 438 4.49e-41 154
MS.gene27974.t1 AT2G20470 31.844 358 203 10 71 421 115 438 6.29e-41 154
MS.gene27974.t1 AT2G20470 31.844 358 203 10 71 421 115 438 6.29e-41 154
MS.gene27974.t1 AT1G03920 31.594 345 206 10 79 421 23 339 8.63e-41 152
MS.gene27974.t1 AT2G19400 31.897 348 198 11 72 407 97 417 1.21e-40 152
MS.gene27974.t1 AT3G23310 30.056 356 218 11 70 421 110 438 2.35e-40 152
MS.gene27974.t1 AT1G03920 31.594 345 206 10 79 421 136 452 3.44e-40 152
MS.gene27974.t1 AT1G03920 31.594 345 206 10 79 421 136 452 3.44e-40 152
MS.gene27974.t1 AT5G09890 32.749 342 196 13 70 406 94 406 9.01e-40 150
MS.gene27974.t1 AT5G09890 32.749 342 196 13 70 406 94 406 9.23e-40 150
MS.gene27974.t1 AT5G04510 30.746 335 171 9 49 381 12 287 7.54e-38 140
MS.gene27974.t1 AT2G25880 27.027 333 172 6 59 390 17 279 2.17e-26 108
MS.gene27974.t1 AT2G25880 27.532 316 158 6 76 390 82 327 7.29e-26 108
MS.gene27974.t1 AT2G25880 27.532 316 158 6 76 390 21 266 2.30e-25 105
MS.gene27974.t1 AT4G32830 26.984 315 159 6 76 389 27 271 5.95e-25 104
MS.gene27974.t1 AT5G58140 37.037 135 81 2 53 187 551 681 4.13e-23 102
MS.gene27974.t1 AT2G45490 28.618 304 146 10 79 381 21 254 4.18e-23 98.6
MS.gene27974.t1 AT5G18700 37.013 154 86 3 77 230 1 143 1.52e-21 98.6
MS.gene27974.t1 AT1G30270 25.994 327 171 8 80 405 31 287 2.10e-21 97.1
MS.gene27974.t1 AT2G45490 27.554 323 147 11 76 389 18 262 2.23e-21 94.4
MS.gene27974.t1 AT3G53930 26.866 335 172 12 59 389 1 266 2.35e-21 97.8
MS.gene27974.t1 AT1G30270 25.994 327 171 8 80 405 31 287 2.45e-21 96.7
MS.gene27974.t1 AT3G53930 26.866 335 172 12 59 389 1 266 2.46e-21 97.4
MS.gene27974.t1 AT5G45810 27.797 295 146 7 73 362 21 253 2.71e-21 96.7
MS.gene27974.t1 AT4G24400 27.134 328 162 11 80 404 9 262 3.33e-21 95.9
MS.gene27974.t1 AT4G24400 27.134 328 162 11 80 404 9 262 4.86e-21 95.5
MS.gene27974.t1 AT4G29810 26.571 350 170 10 75 410 74 350 4.91e-21 94.7
MS.gene27974.t1 AT5G57630 24.759 311 163 8 80 389 12 252 6.35e-21 94.7
MS.gene27974.t1 AT4G29810 26.571 350 170 10 75 410 65 341 6.36e-21 94.4
MS.gene27974.t1 AT3G10660 25.562 356 184 12 44 389 149 433 1.05e-20 95.5
MS.gene27974.t1 AT3G10660 25.562 356 184 12 44 389 149 433 1.05e-20 95.5
MS.gene27974.t1 AT5G10930 27.358 318 160 9 75 389 7 256 1.31e-20 94.4
MS.gene27974.t1 AT4G18700 26.935 323 158 8 73 389 19 269 2.50e-20 94.0
MS.gene27974.t1 AT5G39440 26.441 295 147 7 110 404 46 270 2.56e-20 94.0
MS.gene27974.t1 AT5G57630 24.759 311 163 8 80 389 12 252 2.72e-20 93.2
MS.gene27974.t1 AT3G23000 25.749 334 163 12 80 405 25 281 4.84e-20 92.4
MS.gene27974.t1 AT3G01090 25.228 329 172 9 79 406 18 273 8.74e-20 92.4
MS.gene27974.t1 AT3G01090 25.228 329 172 9 79 406 18 273 8.74e-20 92.4
MS.gene27974.t1 AT3G29160 25.723 311 159 9 110 419 47 286 9.56e-20 90.9
MS.gene27974.t1 AT3G01090 25.228 329 172 9 79 406 41 296 9.69e-20 92.4
MS.gene27974.t1 AT4G29810 26.220 328 164 8 75 393 74 332 1.71e-19 89.7
MS.gene27974.t1 AT3G29160 25.723 311 159 9 110 419 47 286 3.03e-19 90.5
MS.gene27974.t1 AT3G29160 25.723 311 159 9 110 419 47 286 3.03e-19 90.5
MS.gene27974.t1 AT5G01810 24.926 337 180 9 70 405 3 267 3.40e-19 89.4
MS.gene27974.t1 AT5G01810 24.926 337 180 9 70 405 3 267 4.16e-19 89.7
MS.gene27974.t1 AT5G01810 24.926 337 180 9 70 405 3 267 4.16e-19 89.7
MS.gene27974.t1 AT2G20050 37.288 118 67 2 297 412 931 1043 5.97e-19 90.5
MS.gene27974.t1 AT2G20050 35.714 126 74 2 289 412 926 1046 6.53e-19 90.5
MS.gene27974.t1 AT2G25090 27.414 321 172 11 71 389 6 267 7.53e-19 89.4
MS.gene27974.t1 AT4G35310 26.857 350 175 14 76 417 92 368 7.83e-19 89.4
MS.gene27974.t1 AT4G35310 26.857 350 175 14 76 417 92 368 7.83e-19 89.4
MS.gene27974.t1 AT3G17510 25.617 324 168 9 70 389 10 264 1.09e-18 88.6
MS.gene27974.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.79e-18 87.8
MS.gene27974.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.79e-18 87.8
MS.gene27974.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.79e-18 87.8
MS.gene27974.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.79e-18 87.8
MS.gene27974.t1 AT5G45820 24.923 325 166 9 71 389 3 255 7.47e-18 85.9
MS.gene27974.t1 AT4G14580 25.000 320 156 10 80 389 21 266 1.51e-17 85.1
MS.gene27974.t1 AT3G63280 24.074 324 178 8 66 388 44 300 2.65e-17 85.1
MS.gene27974.t1 AT1G48260 26.087 299 151 8 109 405 37 267 2.95e-17 84.0
MS.gene27974.t1 AT2G17290 26.571 350 176 14 76 417 80 356 3.63e-17 84.3
MS.gene27974.t1 AT2G17290 26.571 350 176 14 76 417 80 356 3.63e-17 84.3
MS.gene27974.t1 AT1G29230 24.465 327 175 9 80 405 74 329 4.48e-17 84.0
MS.gene27974.t1 AT1G12680 33.117 154 90 4 79 231 106 247 5.57e-17 83.6
MS.gene27974.t1 AT3G63280 24.194 310 167 8 80 388 4 246 1.28e-16 82.8
MS.gene27974.t1 AT3G63280 24.194 310 167 8 80 388 4 246 1.28e-16 82.8
MS.gene27974.t1 AT3G63280 24.194 310 167 8 80 388 4 246 1.28e-16 82.8
MS.gene27974.t1 AT5G14720 26.531 343 175 14 70 405 6 278 2.25e-16 82.0
MS.gene27974.t1 AT5G14720 26.531 343 175 14 70 405 6 278 2.25e-16 82.0
MS.gene27974.t1 AT5G25110 26.349 315 166 11 75 389 38 286 2.46e-16 81.6
MS.gene27974.t1 AT5G21326 32.099 162 96 4 84 236 8 164 3.45e-16 80.9
MS.gene27974.t1 AT3G04810 23.975 317 165 12 77 388 1 246 5.48e-16 80.9
MS.gene27974.t1 AT3G04810 23.975 317 165 12 77 388 1 246 5.48e-16 80.9
MS.gene27974.t1 AT3G04810 23.975 317 165 12 77 388 1 246 5.48e-16 80.9
MS.gene27974.t1 AT5G28290 24.281 313 163 11 80 388 4 246 6.73e-16 80.5
MS.gene27974.t1 AT5G28290 24.281 313 163 11 80 388 4 246 6.73e-16 80.5
MS.gene27974.t1 AT2G26980 30.058 173 116 3 64 236 8 175 7.15e-16 80.1
MS.gene27974.t1 AT5G28290 24.281 313 163 11 80 388 4 246 7.61e-16 80.1
MS.gene27974.t1 AT2G26980 31.847 157 102 3 80 236 14 165 9.86e-16 77.4
MS.gene27974.t1 AT2G26980 31.847 157 102 3 80 236 14 165 1.27e-15 79.3
MS.gene27974.t1 AT2G26980 31.847 157 102 3 80 236 14 165 1.39e-15 78.6
MS.gene27974.t1 AT2G26980 31.847 157 102 3 80 236 14 165 2.59e-15 78.2
MS.gene27974.t1 AT5G35410 31.579 152 97 3 80 230 11 156 3.27e-15 77.4
MS.gene27974.t1 AT5G35410 31.579 152 97 3 80 230 11 156 6.53e-15 77.0
MS.gene27974.t1 AT2G34180 28.485 165 112 2 72 236 49 207 9.88e-15 76.6
MS.gene27974.t1 AT1G70430 33.129 163 94 5 75 232 11 163 1.03e-14 77.0
MS.gene27974.t1 AT1G70430 33.129 163 94 5 75 232 11 163 1.18e-14 76.6
MS.gene27974.t1 AT1G70430 33.129 163 94 5 75 232 11 163 1.19e-14 76.6
MS.gene27974.t1 AT1G23700 27.103 321 153 12 75 388 11 257 1.37e-14 75.9
MS.gene27974.t1 AT3G61960 31.293 147 95 3 72 218 2 142 1.88e-14 76.3
MS.gene27974.t1 AT1G23700 26.875 320 155 12 75 388 11 257 1.92e-14 75.9
MS.gene27974.t1 AT3G61960 31.293 147 95 3 72 218 2 142 1.94e-14 75.9
MS.gene27974.t1 AT1G23700 26.562 320 156 12 75 388 11 257 2.10e-14 75.5
MS.gene27974.t1 AT1G73500 31.169 154 94 4 79 230 46 189 2.10e-14 74.3
MS.gene27974.t1 AT2G25880 42.105 95 50 2 297 390 144 234 2.52e-14 73.2
MS.gene27974.t1 AT5G24430 23.824 340 183 9 80 412 143 413 4.30e-14 75.1
MS.gene27974.t1 AT1G54960 32.544 169 103 5 66 230 57 218 4.86e-14 74.7
MS.gene27974.t1 AT1G54960 32.544 169 103 5 66 230 57 218 4.86e-14 74.7
MS.gene27974.t1 AT3G49370 25.220 341 177 11 80 412 142 412 6.12e-14 74.3
MS.gene27974.t1 AT1G32320 29.412 187 119 4 46 230 12 187 7.64e-14 72.4
MS.gene27974.t1 AT4G30960 24.759 311 166 8 80 389 24 267 1.18e-13 73.2
MS.gene27974.t1 AT1G35670 32.716 162 95 6 77 231 22 176 1.32e-13 73.2
MS.gene27974.t1 AT4G18950 24.419 258 126 6 110 357 182 380 2.50e-13 72.0
MS.gene27974.t1 AT4G14480 32.680 153 95 3 80 230 15 161 2.91e-13 72.0
MS.gene27974.t1 AT4G18950 24.419 258 126 6 110 357 182 380 3.79e-13 71.6
MS.gene27974.t1 AT4G32660 25.485 361 196 13 36 374 19 328 4.12e-13 70.9
MS.gene27974.t1 AT4G09570 33.540 161 95 6 77 231 21 175 4.65e-13 71.6
MS.gene27974.t1 AT1G09000 34.228 149 90 4 86 230 75 219 5.15e-13 71.6
MS.gene27974.t1 AT4G32660 26.316 361 193 13 36 374 19 328 5.47e-13 70.9
MS.gene27974.t1 AT1G01140 28.070 171 114 3 70 236 5 170 5.60e-13 70.9
MS.gene27974.t1 AT1G01140 28.070 171 114 3 70 236 5 170 5.61e-13 70.9
MS.gene27974.t1 AT3G06030 31.293 147 97 2 86 230 74 218 5.71e-13 71.6
MS.gene27974.t1 AT1G01140 28.070 171 114 3 70 236 5 170 5.78e-13 70.9
MS.gene27974.t1 AT4G32660 25.485 361 196 13 36 374 11 320 5.93e-13 70.5
MS.gene27974.t1 AT1G09000 34.228 149 90 4 86 230 75 219 6.06e-13 71.2
MS.gene27974.t1 AT5G07070 24.189 339 183 10 73 409 6 272 9.84e-13 70.5
MS.gene27974.t1 AT2G30360 30.488 164 102 4 77 236 18 173 1.37e-12 69.7
MS.gene27974.t1 AT2G46700 29.231 195 116 7 44 230 116 296 2.12e-12 69.7
MS.gene27974.t1 AT1G50240 32.026 153 97 5 75 227 1 146 3.44e-12 69.3
MS.gene27974.t1 AT1G50240 32.026 153 97 5 75 227 1 146 3.44e-12 69.3
MS.gene27974.t1 AT5G58950 31.206 141 79 4 93 230 232 357 4.54e-12 68.6
MS.gene27974.t1 AT5G21222 31.405 121 79 2 110 229 40 157 5.71e-12 68.6
MS.gene27974.t1 AT5G21222 31.405 121 79 2 110 229 40 157 5.71e-12 68.6
MS.gene27974.t1 AT5G21222 31.405 121 79 2 110 229 40 157 5.71e-12 68.6
MS.gene27974.t1 AT5G21222 31.405 121 79 2 110 229 40 157 5.71e-12 68.6
MS.gene27974.t1 AT1G18350 28.750 160 102 4 73 230 38 187 7.99e-12 66.6
MS.gene27974.t1 AT3G44200 25.658 152 108 3 80 230 8 155 1.96e-11 67.0
MS.gene27974.t1 AT3G44200 25.658 152 108 3 80 230 8 155 1.96e-11 67.0
MS.gene27974.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.86e-11 66.2
MS.gene27974.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.86e-11 66.2
MS.gene27974.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.87e-11 66.2
MS.gene27974.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.91e-11 66.2
MS.gene27974.t1 AT5G57565 36.538 104 50 3 151 245 18 114 3.19e-11 61.2
MS.gene27974.t1 AT5G57565 36.538 104 50 3 151 245 18 114 3.19e-11 61.2
MS.gene27974.t1 AT1G53570 27.397 146 101 4 86 230 220 361 3.34e-11 65.9
MS.gene27974.t1 AT1G53570 27.397 146 101 4 86 230 220 361 3.71e-11 65.5
MS.gene27974.t1 AT1G08650 33.696 92 60 1 302 393 176 266 6.29e-11 63.5
MS.gene27974.t1 AT1G08650 33.696 92 60 1 302 393 176 266 6.57e-11 63.5
MS.gene27974.t1 AT2G38490 31.325 166 105 5 72 236 21 178 8.78e-11 64.3

Find 115 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGTTGCCGTGGGAGTTTC+CGG 0.194727 4.4:+11844922 None:intergenic
GATTTCCGGGTTACTTAATA+AGG 0.206097 4.4:-11844735 MS.gene27974:CDS
TACGCGCGGGATTTGATTTC+CGG 0.208835 4.4:-11844749 MS.gene27974:CDS
TCATTTCTCTTGCATTGTTA+TGG 0.264166 4.4:-11845502 MS.gene27974:CDS
GCCCGCTCTTGTTCATTTGT+TGG 0.268785 4.4:-11844977 MS.gene27974:CDS
TTTATCTATGAACTTATTTA+CGG 0.276743 4.4:-11844875 MS.gene27974:CDS
GTAGTAATAGCAATAGTAGT+AGG 0.292562 4.4:-11844556 MS.gene27974:CDS
GAGTTTCCGGCGGCAACTTC+CGG 0.325096 4.4:+11844935 None:intergenic
GCCGTGGATTGGTGGTCGTT+TGG 0.326507 4.4:-11844902 MS.gene27974:CDS
GTTTGCGGCTCCATCGAATA+AGG 0.328263 4.4:-11844843 MS.gene27974:CDS
TTTCTTGAGCCAGGAACTTC+AGG 0.341156 4.4:+11844611 None:intergenic
GAAATCACATAGAGCTGAAA+TGG 0.348283 4.4:-11845592 MS.gene27974:CDS
TTCAAGCGTGCTTGAGGCCG+TGG 0.353163 4.4:+11844775 None:intergenic
CCGTGGATTGGTGGTCGTTT+GGG 0.365851 4.4:-11844901 MS.gene27974:CDS
TTAACGCCGCCTGAAGTTCC+TGG 0.377497 4.4:-11844620 MS.gene27974:CDS
TTACGGTCGTACTCCGTTTG+CGG 0.414214 4.4:-11844858 MS.gene27974:CDS
CGTATCGGCGCCGGAGATAT+AGG 0.415019 4.4:-11845708 MS.gene27974:CDS
TGTGGTACCATGTTAGAAAC+TGG 0.426673 4.4:-11845969 None:intergenic
TTCAAACCGTTCAACCGAAC+CGG 0.427817 4.4:-11845024 MS.gene27974:CDS
GCATAGAGTGTAGGAAGAAA+AGG 0.432484 4.4:+11845540 None:intergenic
GTGAGGGTGTTTGTGGCGTA+TGG 0.435424 4.4:+11845452 None:intergenic
CGCAGTGTTTCCTTATTCGA+TGG 0.435512 4.4:+11844833 None:intergenic
TTATCTGATGATTCAACGGC+TGG 0.439572 4.4:+11845154 None:intergenic
CGGAGGAGCGGTGAGGTTTG+AGG 0.441661 4.4:+11845811 None:intergenic
GGAGGAGCGGTGAGGTTTGA+GGG 0.445021 4.4:+11845812 None:intergenic
TAGTAATAGCAATAGTAGTA+GGG 0.453024 4.4:-11844555 MS.gene27974:CDS
GAACAAGAGCGGGCAGAAAC+CGG 0.457262 4.4:+11844986 None:intergenic
ACGCGCGGGATTTGATTTCC+GGG 0.459360 4.4:-11844748 MS.gene27974:CDS
CCTTACGTGACTTGAACAAC+CGG 0.461161 4.4:+11845047 None:intergenic
CTTCGTTTCTGAGGCGGCAG+AGG 0.467146 4.4:+11845676 None:intergenic
CTATATCTCCGGCGCCGATA+CGG 0.467445 4.4:+11845709 None:intergenic
CGACCTTCTTCCGCCTTCAC+CGG 0.471504 4.4:-11845844 MS.gene27974:CDS
GATCGAACTAACACATTCTC+AGG 0.472536 4.4:+11845232 None:intergenic
CGGCGCCGATACGGCGGAGG+AGG 0.472990 4.4:+11845718 None:intergenic
TTATTCGATGGAGCCGCAAA+CGG 0.483287 4.4:+11844845 None:intergenic
CACTTGTTTGTATGCGATGA+AGG 0.483898 4.4:-11845646 MS.gene27974:CDS
GACGGTTGTGAGGGTGTTTG+TGG 0.483934 4.4:+11845445 None:intergenic
ACCAATCCACGGCGTTGCCG+TGG 0.489785 4.4:+11844912 None:intergenic
CCCACGGCAACGCCGTGGAT+TGG 0.491974 4.4:-11844913 MS.gene27974:CDS
AGTAATAGCAATAGTAGTAG+GGG 0.503772 4.4:-11844554 MS.gene27974:CDS
ACGGCAACGCCGTGGATTGG+TGG 0.504904 4.4:-11844910 MS.gene27974:CDS
CTCCTCCGCCGTATCGGCGC+CGG 0.505028 4.4:-11845717 MS.gene27974:CDS
ATTTACCTAGCGGAAGTAAG+AGG 0.510467 4.4:+11845420 None:intergenic
GGTTTGAGGGAGAGACTCTC+CGG 0.513127 4.4:+11845825 None:intergenic
GTGGGTGTTGGAAAAGTAAG+AGG 0.513288 4.4:+11844794 None:intergenic
TTTCACCTCCTCCGCCGTAT+CGG 0.514538 4.4:-11845723 MS.gene27974:CDS
GTGCTTGAGGCCGTGGGTGT+TGG 0.516685 4.4:+11844782 None:intergenic
TTATGCAGCTGAAGTATTGG+TGG 0.519416 4.4:-11845302 MS.gene27974:CDS
TCTCCGGTGAAGGCGGAAGA+AGG 0.524425 4.4:+11845841 None:intergenic
CTCCGGCGCCGATACGGCGG+AGG 0.524516 4.4:+11845715 None:intergenic
GAACGGTGTAGGAAAAGAAC+GGG 0.527039 4.4:+11845084 None:intergenic
AGCTGAAGTATTGGTGGCAT+TGG 0.529070 4.4:-11845296 MS.gene27974:CDS
GTAAACAGTGCCTATATCTC+CGG 0.533869 4.4:+11845698 None:intergenic
TGTCATCTTCTTCGTTTCTG+AGG 0.535049 4.4:+11845667 None:intergenic
TCCAACAAATGAACAAGAGC+GGG 0.536839 4.4:+11844976 None:intergenic
TAAATTATCTGATGATTCAA+CGG 0.538115 4.4:+11845150 None:intergenic
CAACGACTCGGGTCTAAACG+TGG 0.539047 4.4:-11844704 MS.gene27974:CDS
TAAGAGGAAGACGGTTGTGA+GGG 0.539144 4.4:+11845436 None:intergenic
CGGATCCTTATTAAGTAACC+CGG 0.541564 4.4:+11844730 None:intergenic
TTTGTATGCGATGAAGGTTG+TGG 0.541682 4.4:-11845640 MS.gene27974:CDS
TTGGAGTACCTTCACATGCT+AGG 0.543818 4.4:-11845277 MS.gene27974:CDS
GTAAGAGGAAGACGGTTGTG+AGG 0.548424 4.4:+11845435 None:intergenic
GAAAAGCAAGTGAACGGTGT+AGG 0.553651 4.4:+11845073 None:intergenic
AGGATCCGACTCAACGACTC+GGG 0.561444 4.4:-11844715 MS.gene27974:CDS
GTCTCGCCGGAAGTTGCCGC+CGG 0.563258 4.4:-11844941 MS.gene27974:CDS
AGAACGGGAACGAGTGTAGG+AGG 0.569045 4.4:+11845099 None:intergenic
AGGGAGAGACTCTCCGGTGA+AGG 0.570898 4.4:+11845831 None:intergenic
CCGGTTGTTCAAGTCACGTA+AGG 0.570932 4.4:-11845047 MS.gene27974:CDS
ATGTGAGAGCGGACTTGCGA+CGG 0.580197 4.4:+11845754 None:intergenic
CATCTTCTTCGTTTCTGAGG+CGG 0.581374 4.4:+11845670 None:intergenic
TCAAACTCAGCATAGAGTGT+AGG 0.584379 4.4:+11845531 None:intergenic
GTAGAGTTCAAGCGTGCTTG+AGG 0.584583 4.4:+11844769 None:intergenic
TCAAGCGTGCTTGAGGCCGT+GGG 0.588656 4.4:+11844776 None:intergenic
AAAAGAACGGGAACGAGTGT+AGG 0.591056 4.4:+11845096 None:intergenic
TATCTCCGGCGCCGATACGG+CGG 0.593136 4.4:+11845712 None:intergenic
AACACATGAATATGTCTCGC+CGG 0.593503 4.4:-11844954 MS.gene27974:CDS
GAGAGACTCTCCGGTGAAGG+CGG 0.595659 4.4:+11845834 None:intergenic
TATCTGATGATTCAACGGCT+GGG 0.596183 4.4:+11845155 None:intergenic
GAAGGTAGCGGAACGGATGG+CGG 0.596507 4.4:+11845776 None:intergenic
GATGGCGGAGTAAGCGAAGT+CGG 0.597879 4.4:+11845791 None:intergenic
CCAATCCACGGCGTTGCCGT+GGG 0.598052 4.4:+11844913 None:intergenic
ACGGAAGGTAGCGGAACGGA+TGG 0.603297 4.4:+11845773 None:intergenic
CACGCTTGAACTCTACGCGC+GGG 0.603495 4.4:-11844762 MS.gene27974:CDS
CCCAAACGACCACCAATCCA+CGG 0.607776 4.4:+11844901 None:intergenic
GGACTTGCGACGGAAGGTAG+CGG 0.609884 4.4:+11845764 None:intergenic
TATGGAATGCAAGTCACCAC+CGG 0.613302 4.4:+11845470 None:intergenic
AAACTCCCACGGCAACGCCG+TGG 0.617090 4.4:-11844918 MS.gene27974:CDS
TGAACGGTGTAGGAAAAGAA+CGG 0.619436 4.4:+11845083 None:intergenic
AAGGATCCGACTCAACGACT+CGG 0.623405 4.4:-11844716 MS.gene27974:CDS
GTTGCCGCCGGAAACTCCCA+CGG 0.625351 4.4:-11844929 MS.gene27974:CDS
CGGTTAGAAAAGCAAGTGAA+CGG 0.630233 4.4:+11845067 None:intergenic
CTTGAGCCAGGAACTTCAGG+CGG 0.630339 4.4:+11844614 None:intergenic
GTTGCCGTGGGAGTTTCCGG+CGG 0.640921 4.4:+11844925 None:intergenic
TTCCAACAAATGAACAAGAG+CGG 0.641367 4.4:+11844975 None:intergenic
TTAGACCCGAGTCGTTGAGT+CGG 0.643231 4.4:+11844710 None:intergenic
AATGTGTTAGTTCGATCAGA+CGG 0.646609 4.4:-11845226 MS.gene27974:CDS
GATGAAGGTTGTGGATAAAG+AGG 0.646934 4.4:-11845631 MS.gene27974:CDS
AAATGATTCCTAGCATGTGA+AGG 0.647952 4.4:+11845269 None:intergenic
GAAGAAGGTCGAATGAAAGA+CGG 0.658019 4.4:+11845856 None:intergenic
GCACGCTTGAACTCTACGCG+CGG 0.659257 4.4:-11844763 MS.gene27974:CDS
AGTAAGCGAAGTCGGAGGAG+CGG 0.659359 4.4:+11845799 None:intergenic
GGCGGAGGAGGTGAAAGTCA+CGG 0.667380 4.4:+11845730 None:intergenic
GTCTTCCTCTTACTTCCGCT+AGG 0.667703 4.4:-11845425 MS.gene27974:intron
ACTCGGGTCTAAACGTGGGT+CGG 0.670437 4.4:-11844699 MS.gene27974:CDS
ACGTGTACCAGTTTCTAACA+TGG 0.671516 4.4:+11845962 None:intergenic
GAGAGCGGACTTGCGACGGA+AGG 0.672834 4.4:+11845758 None:intergenic
TAGCGGAAGTAAGAGGAAGA+CGG 0.675534 4.4:+11845427 None:intergenic
GTAATAGCAATAGTAGTAGG+GGG 0.678715 4.4:-11844553 MS.gene27974:CDS
AACGACTCGGGTCTAAACGT+GGG 0.679805 4.4:-11844703 MS.gene27974:CDS
AAAGTCACGGAATGTGAGAG+CGG 0.682400 4.4:+11845743 None:intergenic
GGGTAATGTTGATGAAAACG+TGG 0.689459 4.4:+11845120 None:intergenic
GAACGGGAACGAGTGTAGGA+GGG 0.698412 4.4:+11845100 None:intergenic
GCGAAGTCGGAGGAGCGGTG+AGG 0.701596 4.4:+11845804 None:intergenic
TGCGACGGAAGGTAGCGGAA+CGG 0.710050 4.4:+11845769 None:intergenic
GGCGGAGTAAGCGAAGTCGG+AGG 0.716616 4.4:+11845794 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCTATGAACTTATTTA+CGG - chr4.4:11845605-11845624 MS.gene27974:CDS 15.0%
!!! GTTTTTTAAAGGTATTAATT+TGG - chr4.4:11845823-11845842 MS.gene27974:CDS 15.0%
!! TAAATTATCTGATGATTCAA+CGG + chr4.4:11845333-11845352 None:intergenic 20.0%
! TAGTAATAGCAATAGTAGTA+GGG - chr4.4:11845925-11845944 MS.gene27974:CDS 25.0%
!! ATTGTTATGGAATTTTGTTC+CGG - chr4.4:11844991-11845010 MS.gene27974:CDS 25.0%
!!! AAGAAGCATTCGTTTTTTAA+AGG - chr4.4:11845812-11845831 MS.gene27974:CDS 25.0%
AGTAATAGCAATAGTAGTAG+GGG - chr4.4:11845926-11845945 MS.gene27974:CDS 30.0%
GTAGTAATAGCAATAGTAGT+AGG - chr4.4:11845924-11845943 MS.gene27974:CDS 30.0%
TCATTTCTCTTGCATTGTTA+TGG - chr4.4:11844978-11844997 MS.gene27974:CDS 30.0%
! ATTTTATGCAGCTGAAGTAT+TGG - chr4.4:11845175-11845194 MS.gene27974:CDS 30.0%
! TGATAAAACGACATCGTTTT+TGG + chr4.4:11845896-11845915 None:intergenic 30.0%
!!! AAAACGATGTCGTTTTATCA+TGG - chr4.4:11845896-11845915 MS.gene27974:CDS 30.0%
!!! AAACGATGTCGTTTTATCAT+GGG - chr4.4:11845897-11845916 MS.gene27974:CDS 30.0%
AAATGATTCCTAGCATGTGA+AGG + chr4.4:11845214-11845233 None:intergenic 35.0%
AATGTGTTAGTTCGATCAGA+CGG - chr4.4:11845254-11845273 MS.gene27974:CDS 35.0%
GAAATCACATAGAGCTGAAA+TGG - chr4.4:11844888-11844907 MS.gene27974:CDS 35.0%
GATTTCCGGGTTACTTAATA+AGG - chr4.4:11845745-11845764 MS.gene27974:CDS 35.0%
GTAATAGCAATAGTAGTAGG+GGG - chr4.4:11845927-11845946 MS.gene27974:CDS 35.0%
TTCCAACAAATGAACAAGAG+CGG + chr4.4:11845508-11845527 None:intergenic 35.0%
!!! ATGTCGTTTTATCATGGGAA+GGG - chr4.4:11845902-11845921 MS.gene27974:CDS 35.0%
!!! GTTTTGAGAGATTTACCTAG+CGG + chr4.4:11845073-11845092 None:intergenic 35.0%
AACACATGAATATGTCTCGC+CGG - chr4.4:11845526-11845545 MS.gene27974:CDS 40.0%
ATTTACCTAGCGGAAGTAAG+AGG + chr4.4:11845063-11845082 None:intergenic 40.0%
CACTTGTTTGTATGCGATGA+AGG - chr4.4:11844834-11844853 MS.gene27974:CDS 40.0%
CGGATCCTTATTAAGTAACC+CGG + chr4.4:11845753-11845772 None:intergenic 40.0%
CGGTTAGAAAAGCAAGTGAA+CGG + chr4.4:11845416-11845435 None:intergenic 40.0%
GAAGAAGGTCGAATGAAAGA+CGG + chr4.4:11844627-11844646 None:intergenic 40.0%
GATCGAACTAACACATTCTC+AGG + chr4.4:11845251-11845270 None:intergenic 40.0%
GATGAAGGTTGTGGATAAAG+AGG - chr4.4:11844849-11844868 MS.gene27974:CDS 40.0%
GCATAGAGTGTAGGAAGAAA+AGG + chr4.4:11844943-11844962 None:intergenic 40.0%
GTAAACAGTGCCTATATCTC+CGG + chr4.4:11844785-11844804 None:intergenic 40.0%
TATCTGATGATTCAACGGCT+GGG + chr4.4:11845328-11845347 None:intergenic 40.0%
TCAAACTCAGCATAGAGTGT+AGG + chr4.4:11844952-11844971 None:intergenic 40.0%
TCCAACAAATGAACAAGAGC+GGG + chr4.4:11845507-11845526 None:intergenic 40.0%
TGAACGGTGTAGGAAAAGAA+CGG + chr4.4:11845400-11845419 None:intergenic 40.0%
TGTCATCTTCTTCGTTTCTG+AGG + chr4.4:11844816-11844835 None:intergenic 40.0%
TTATCTGATGATTCAACGGC+TGG + chr4.4:11845329-11845348 None:intergenic 40.0%
TTTGTATGCGATGAAGGTTG+TGG - chr4.4:11844840-11844859 MS.gene27974:CDS 40.0%
! GGGTAATGTTGATGAAAACG+TGG + chr4.4:11845363-11845382 None:intergenic 40.0%
! GTTATGGAATTTTGTTCCGG+TGG - chr4.4:11844994-11845013 MS.gene27974:CDS 40.0%
!! CGTTCACTTGCTTTTCTAAC+CGG - chr4.4:11845414-11845433 MS.gene27974:intron 40.0%
!! TCTTACTTTTCCAACACCCA+CGG - chr4.4:11845688-11845707 MS.gene27974:CDS 40.0%
!! TTATGCAGCTGAAGTATTGG+TGG - chr4.4:11845178-11845197 MS.gene27974:CDS 40.0%
!!! GATGTCGTTTTATCATGGGA+AGG - chr4.4:11845901-11845920 MS.gene27974:CDS 40.0%
AAAAGAACGGGAACGAGTGT+AGG + chr4.4:11845387-11845406 None:intergenic 45.0%
AAAGTCACGGAATGTGAGAG+CGG + chr4.4:11844740-11844759 None:intergenic 45.0%
CCTTACGTGACTTGAACAAC+CGG + chr4.4:11845436-11845455 None:intergenic 45.0%
CGCAGTGTTTCCTTATTCGA+TGG + chr4.4:11845650-11845669 None:intergenic 45.0%
GAAAAGCAAGTGAACGGTGT+AGG + chr4.4:11845410-11845429 None:intergenic 45.0%
GAACGGTGTAGGAAAAGAAC+GGG + chr4.4:11845399-11845418 None:intergenic 45.0%
TAAGAGGAAGACGGTTGTGA+GGG + chr4.4:11845047-11845066 None:intergenic 45.0%
TAGCGGAAGTAAGAGGAAGA+CGG + chr4.4:11845056-11845075 None:intergenic 45.0%
TAGTAGTAGGGGGCAACAAA+CGG - chr4.4:11845937-11845956 MS.gene27974:CDS 45.0%
TATGGAATGCAAGTCACCAC+CGG + chr4.4:11845013-11845032 None:intergenic 45.0%
TCAGCTACAAAAAGCCGGTT+CGG + chr4.4:11845473-11845492 None:intergenic 45.0%
TTATTCGATGGAGCCGCAAA+CGG + chr4.4:11845638-11845657 None:intergenic 45.0%
TTCAAACCGTTCAACCGAAC+CGG - chr4.4:11845456-11845475 MS.gene27974:CDS 45.0%
TTTCTTGAGCCAGGAACTTC+AGG + chr4.4:11845872-11845891 None:intergenic 45.0%
! CATCTTCTTCGTTTCTGAGG+CGG + chr4.4:11844813-11844832 None:intergenic 45.0%
! TTGGAGTACCTTCACATGCT+AGG - chr4.4:11845203-11845222 MS.gene27974:CDS 45.0%
!! AAAAAGCCGGTTCGGTTGAA+CGG + chr4.4:11845465-11845484 None:intergenic 45.0%
!! AGCTGAAGTATTGGTGGCAT+TGG - chr4.4:11845184-11845203 MS.gene27974:CDS 45.0%
!! GTGGGTGTTGGAAAAGTAAG+AGG + chr4.4:11845689-11845708 None:intergenic 45.0%
!!! GTTTTTGGCTTTCTTGAGCC+AGG + chr4.4:11845881-11845900 None:intergenic 45.0%
AAGGATCCGACTCAACGACT+CGG - chr4.4:11845764-11845783 MS.gene27974:CDS 50.0%
CCGGTTCAGCTACAAAAAGC+CGG + chr4.4:11845478-11845497 None:intergenic 50.0%
CCGGTTGTTCAAGTCACGTA+AGG - chr4.4:11845433-11845452 MS.gene27974:CDS 50.0%
GCCCGCTCTTGTTCATTTGT+TGG - chr4.4:11845503-11845522 MS.gene27974:CDS 50.0%
GTAAGAGGAAGACGGTTGTG+AGG + chr4.4:11845048-11845067 None:intergenic 50.0%
GTAGAGTTCAAGCGTGCTTG+AGG + chr4.4:11845714-11845733 None:intergenic 50.0%
GTCTTCCTCTTACTTCCGCT+AGG - chr4.4:11845055-11845074 MS.gene27974:CDS 50.0%
GTTTGCGGCTCCATCGAATA+AGG - chr4.4:11845637-11845656 MS.gene27974:CDS 50.0%
TTACGGTCGTACTCCGTTTG+CGG - chr4.4:11845622-11845641 MS.gene27974:CDS 50.0%
TTAGACCCGAGTCGTTGAGT+CGG + chr4.4:11845773-11845792 None:intergenic 50.0%
! AACGACTCGGGTCTAAACGT+GGG - chr4.4:11845777-11845796 MS.gene27974:CDS 50.0%
! CCGGCTTTTTGTAGCTGAAC+CGG - chr4.4:11845475-11845494 MS.gene27974:CDS 50.0%
! TACGCGCGGGATTTGATTTC+CGG - chr4.4:11845731-11845750 MS.gene27974:CDS 50.0%
ACTCGGGTCTAAACGTGGGT+CGG - chr4.4:11845781-11845800 MS.gene27974:CDS 55.0%
AGAACGGGAACGAGTGTAGG+AGG + chr4.4:11845384-11845403 None:intergenic 55.0%
AGGATCCGACTCAACGACTC+GGG - chr4.4:11845765-11845784 MS.gene27974:CDS 55.0%
AGTAAGCGAAGTCGGAGGAG+CGG + chr4.4:11844684-11844703 None:intergenic 55.0%
CCCAAACGACCACCAATCCA+CGG + chr4.4:11845582-11845601 None:intergenic 55.0%
CTTGAGCCAGGAACTTCAGG+CGG + chr4.4:11845869-11845888 None:intergenic 55.0%
GAACAAGAGCGGGCAGAAAC+CGG + chr4.4:11845497-11845516 None:intergenic 55.0%
GAACGGGAACGAGTGTAGGA+GGG + chr4.4:11845383-11845402 None:intergenic 55.0%
GGTTTGAGGGAGAGACTCTC+CGG + chr4.4:11844658-11844677 None:intergenic 55.0%
TTAACGCCGCCTGAAGTTCC+TGG - chr4.4:11845860-11845879 MS.gene27974:CDS 55.0%
TTTCACCTCCTCCGCCGTAT+CGG - chr4.4:11844757-11844776 MS.gene27974:CDS 55.0%
! ACGCGCGGGATTTGATTTCC+GGG - chr4.4:11845732-11845751 MS.gene27974:CDS 55.0%
! ATGTGAGAGCGGACTTGCGA+CGG + chr4.4:11844729-11844748 None:intergenic 55.0%
! CAACGACTCGGGTCTAAACG+TGG - chr4.4:11845776-11845795 MS.gene27974:CDS 55.0%
!! CCGTGGATTGGTGGTCGTTT+GGG - chr4.4:11845579-11845598 MS.gene27974:CDS 55.0%
!! CTATATCTCCGGCGCCGATA+CGG + chr4.4:11844774-11844793 None:intergenic 55.0%
!! GACGGTTGTGAGGGTGTTTG+TGG + chr4.4:11845038-11845057 None:intergenic 55.0%
!! GATGGCGGAGTAAGCGAAGT+CGG + chr4.4:11844692-11844711 None:intergenic 55.0%
!! GTGAGGGTGTTTGTGGCGTA+TGG + chr4.4:11845031-11845050 None:intergenic 55.0%
AGGGAGAGACTCTCCGGTGA+AGG + chr4.4:11844652-11844671 None:intergenic 60.0%
CACGCTTGAACTCTACGCGC+GGG - chr4.4:11845718-11845737 MS.gene27974:CDS 60.0%
CGACCTTCTTCCGCCTTCAC+CGG - chr4.4:11844636-11844655 MS.gene27974:CDS 60.0%
GAGAGACTCTCCGGTGAAGG+CGG + chr4.4:11844649-11844668 None:intergenic 60.0%
GAGTTTCCGGCGGCAACTTC+CGG + chr4.4:11845548-11845567 None:intergenic 60.0%
GCACGCTTGAACTCTACGCG+CGG - chr4.4:11845717-11845736 MS.gene27974:CDS 60.0%
GGACTTGCGACGGAAGGTAG+CGG + chr4.4:11844719-11844738 None:intergenic 60.0%
GGAGGAGCGGTGAGGTTTGA+GGG + chr4.4:11844671-11844690 None:intergenic 60.0%
GGCGGAGGAGGTGAAAGTCA+CGG + chr4.4:11844753-11844772 None:intergenic 60.0%
TCAAGCGTGCTTGAGGCCGT+GGG + chr4.4:11845707-11845726 None:intergenic 60.0%
TCTCCGGTGAAGGCGGAAGA+AGG + chr4.4:11844642-11844661 None:intergenic 60.0%
TTCAAGCGTGCTTGAGGCCG+TGG + chr4.4:11845708-11845727 None:intergenic 60.0%
! CGTATCGGCGCCGGAGATAT+AGG - chr4.4:11844772-11844791 MS.gene27974:CDS 60.0%
!! ACGGAAGGTAGCGGAACGGA+TGG + chr4.4:11844710-11844729 None:intergenic 60.0%
!! CTTCGTTTCTGAGGCGGCAG+AGG + chr4.4:11844807-11844826 None:intergenic 60.0%
!! GAAGGTAGCGGAACGGATGG+CGG + chr4.4:11844707-11844726 None:intergenic 60.0%
!! GCCGTGGATTGGTGGTCGTT+TGG - chr4.4:11845578-11845597 MS.gene27974:CDS 60.0%
!! TGCGACGGAAGGTAGCGGAA+CGG + chr4.4:11844714-11844733 None:intergenic 60.0%
AAACTCCCACGGCAACGCCG+TGG - chr4.4:11845562-11845581 MS.gene27974:CDS 65.0%
ACCAATCCACGGCGTTGCCG+TGG + chr4.4:11845571-11845590 None:intergenic 65.0%
CCAATCCACGGCGTTGCCGT+GGG + chr4.4:11845570-11845589 None:intergenic 65.0%
CGGAGGAGCGGTGAGGTTTG+AGG + chr4.4:11844672-11844691 None:intergenic 65.0%
GGCGGAGTAAGCGAAGTCGG+AGG + chr4.4:11844689-11844708 None:intergenic 65.0%
GGCGTTGCCGTGGGAGTTTC+CGG + chr4.4:11845561-11845580 None:intergenic 65.0%
GTGCTTGAGGCCGTGGGTGT+TGG + chr4.4:11845701-11845720 None:intergenic 65.0%
GTTGCCGCCGGAAACTCCCA+CGG - chr4.4:11845551-11845570 MS.gene27974:CDS 65.0%
GTTGCCGTGGGAGTTTCCGG+CGG + chr4.4:11845558-11845577 None:intergenic 65.0%
! GAGAGCGGACTTGCGACGGA+AGG + chr4.4:11844725-11844744 None:intergenic 65.0%
!! ACGGCAACGCCGTGGATTGG+TGG - chr4.4:11845570-11845589 MS.gene27974:CDS 65.0%
!! TATCTCCGGCGCCGATACGG+CGG + chr4.4:11844771-11844790 None:intergenic 65.0%
CCCACGGCAACGCCGTGGAT+TGG - chr4.4:11845567-11845586 MS.gene27974:CDS 70.0%
GCGAAGTCGGAGGAGCGGTG+AGG + chr4.4:11844679-11844698 None:intergenic 70.0%
GTCTCGCCGGAAGTTGCCGC+CGG - chr4.4:11845539-11845558 MS.gene27974:CDS 70.0%
! CTCCTCCGCCGTATCGGCGC+CGG - chr4.4:11844763-11844782 MS.gene27974:CDS 75.0%
!!! CGGCGCCGATACGGCGGAGG+AGG + chr4.4:11844765-11844784 None:intergenic 80.0%
!!! CTCCGGCGCCGATACGGCGG+AGG + chr4.4:11844768-11844787 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 11844520 11845982 11844520 ID=MS.gene27974
chr4.4 mRNA 11844520 11845982 11844520 ID=MS.gene27974.t1;Parent=MS.gene27974
chr4.4 exon 11845426 11845982 11845426 ID=MS.gene27974.t1.exon1;Parent=MS.gene27974.t1
chr4.4 CDS 11845426 11845982 11845426 ID=cds.MS.gene27974.t1;Parent=MS.gene27974.t1
chr4.4 exon 11844520 11845327 11844520 ID=MS.gene27974.t1.exon2;Parent=MS.gene27974.t1
chr4.4 CDS 11844520 11845327 11844520 ID=cds.MS.gene27974.t1;Parent=MS.gene27974.t1
Gene Sequence

>MS.gene27974

ATGTTAGAAACTGGTACACGTGATTCTGAGTTGAGTTTAGAAACTGTGAATTCAACACAACGAAGCTCAATGAGCAGTGAAAGCATTTGCAGCACTAGTTTCAGCCGTCTTTCATTCGACCTTCTTCCGCCTTCACCGGAGAGTCTCTCCCTCAAACCTCACCGCTCCTCCGACTTCGCTTACTCCGCCATCCGTTCCGCTACCTTCCGTCGCAAGTCCGCTCTCACATTCCGTGACTTTCACCTCCTCCGCCGTATCGGCGCCGGAGATATAGGCACTGTTTACCTCTGCCGCCTCAGAAACGAAGAAGATGACACTTGTTTGTATGCGATGAAGGTTGTGGATAAAGAGGTTGTTGCATTGAAGAAGAAATCACATAGAGCTGAAATGGAGAGAAAGATTCTGAAAATGCTTGATCATCCTTTTCTTCCTACACTCTATGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAATTTTGTTCCGGTGGTGACTTGCATTCCATACGCCACAAACACCCTCACAACCGTCTTCCTCTTACTTCCGCTAGGTAAATCTCTCAAAACACAGTCTATTTTACGAATCTAAACTACAAGAACTGAATGTATAAGTTATATGCTCATGTTATTTTTGTATATTGTTACTCAGATTTTATGCAGCTGAAGTATTGGTGGCATTGGAGTACCTTCACATGCTAGGAATCATTTACAGAGATCTAAAGCCTGAGAATGTGTTAGTTCGATCAGACGGTCACATTATGCTTTCAGATTTCGATCTTTCACTTTGCTCAAATGCAATCCCAGCCGTTGAATCATCAGATAATTTACAAGATTCCACGTTTTCATCAACATTACCCTCCTACACTCGTTCCCGTTCTTTTCCTACACCGTTCACTTGCTTTTCTAACCGGTTGTTCAAGTCACGTAAGGTTCAAACCGTTCAACCGAACCGGCTTTTTGTAGCTGAACCGGTTTCTGCCCGCTCTTGTTCATTTGTTGGAACACATGAATATGTCTCGCCGGAAGTTGCCGCCGGAAACTCCCACGGCAACGCCGTGGATTGGTGGTCGTTTGGGATATTTATCTATGAACTTATTTACGGTCGTACTCCGTTTGCGGCTCCATCGAATAAGGAAACACTGCGTAACATCTTCAAAAAGCCTCTTACTTTTCCAACACCCACGGCCTCAAGCACGCTTGAACTCTACGCGCGGGATTTGATTTCCGGGTTACTTAATAAGGATCCGACTCAACGACTCGGGTCTAAACGTGGGTCGGCTGACGTCAAGAAGCATTCGTTTTTTAAAGGTATTAATTTGGCGCTGATTCGTATGTTAACGCCGCCTGAAGTTCCTGGCTCAAGAAAGCCAAAAACGATGTCGTTTTATCATGGGAAGGGTAGTAATAGCAATAGTAGTAGGGGGCAACAAACGGCGTCGTTTGATATTTACTTTTGA
Protein sequence

>MS.gene27974.t1

MLETGTRDSELSLETVNSTQRSSMSSESICSTSFSRLSFDLLPPSPESLSLKPHRSSDFAYSAIRSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRNEEDDTCLYAMKVVDKEVVALKKKSHRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSIRHKHPHNRLPLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESSDNLQDSTFSSTLPSYTRSRSFPTPFTCFSNRLFKSRKVQTVQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGRTPFAAPSNKETLRNIFKKPLTFPTPTASSTLELYARDLISGLLNKDPTQRLGSKRGSADVKKHSFFKGINLALIRMLTPPEVPGSRKPKTMSFYHGKGSNSNSSRGQQTASFDIYF