Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85555.t1 | XP_013468725.1 | 98.5 | 459 | 7 | 0 | 1 | 459 | 1 | 459 | 5.70E-265 | 922.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85555.t1 | Q4FE47 | 56.6 | 488 | 157 | 8 | 1 | 459 | 1 | 462 | 1.0e-145 | 518.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85555.t1 | A0A072VLQ0 | 98.5 | 459 | 7 | 0 | 1 | 459 | 1 | 459 | 4.1e-265 | 922.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85555 | MS.gene69969 | PPI |
| MS.gene85555 | MS.gene030899 | PPI |
| MS.gene99555 | MS.gene85555 | PPI |
| MS.gene85555 | MS.gene022002 | PPI |
| MS.gene85555 | MS.gene026355 | PPI |
| MS.gene47936 | MS.gene85555 | PPI |
| MS.gene85555 | MS.gene056304 | PPI |
| MS.gene85555 | MS.gene05830 | PPI |
| MS.gene23814 | MS.gene85555 | PPI |
| MS.gene85555 | MS.gene004394 | PPI |
| MS.gene85555 | MS.gene44730 | PPI |
| MS.gene31909 | MS.gene85555 | PPI |
| MS.gene85555 | MS.gene64891 | PPI |
| MS.gene85555 | MS.gene041037 | PPI |
| MS.gene72659 | MS.gene85555 | PPI |
| MS.gene85555 | MS.gene53503 | PPI |
| MS.gene066499 | MS.gene85555 | PPI |
| MS.gene85555 | MS.gene27974 | PPI |
| MS.gene85555 | MS.gene65332 | PPI |
| MS.gene85555 | MS.gene49880 | PPI |
| MS.gene85555 | MS.gene86544 | PPI |
| MS.gene85555 | MS.gene002713 | PPI |
| MS.gene96258 | MS.gene85555 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85555.t1 | MTR_1g476030 | 98.475 | 459 | 7 | 0 | 1 | 459 | 1 | 459 | 0.0 | 932 |
| MS.gene85555.t1 | MTR_1g476030 | 96.477 | 369 | 13 | 0 | 91 | 459 | 24 | 392 | 0.0 | 729 |
| MS.gene85555.t1 | MTR_3g009280 | 33.588 | 131 | 84 | 2 | 4 | 134 | 221 | 348 | 5.53e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85555.t1 | AT3G23280 | 59.914 | 464 | 155 | 8 | 1 | 459 | 1 | 438 | 0.0 | 534 |
| MS.gene85555.t1 | AT3G23280 | 56.762 | 488 | 156 | 8 | 1 | 459 | 1 | 462 | 0.0 | 520 |
| MS.gene85555.t1 | AT4G14365 | 55.150 | 301 | 108 | 3 | 3 | 276 | 5 | 305 | 4.11e-103 | 312 |
| MS.gene85555.t1 | AT4G14365 | 67.213 | 61 | 20 | 0 | 399 | 459 | 316 | 376 | 5.32e-23 | 100 |
| MS.gene85555.t1 | AT4G35450 | 37.600 | 125 | 75 | 2 | 10 | 134 | 183 | 304 | 2.23e-14 | 74.3 |
| MS.gene85555.t1 | AT4G35450 | 37.600 | 125 | 75 | 2 | 10 | 134 | 221 | 342 | 2.77e-14 | 74.3 |
| MS.gene85555.t1 | AT4G35450 | 37.600 | 125 | 75 | 2 | 10 | 134 | 221 | 342 | 2.77e-14 | 74.3 |
| MS.gene85555.t1 | AT4G35450 | 37.600 | 125 | 75 | 2 | 10 | 134 | 221 | 342 | 2.77e-14 | 74.3 |
| MS.gene85555.t1 | AT4G35450 | 37.600 | 125 | 75 | 2 | 10 | 134 | 229 | 350 | 2.98e-14 | 74.3 |
| MS.gene85555.t1 | AT2G17390 | 35.200 | 125 | 78 | 2 | 10 | 134 | 223 | 344 | 3.29e-13 | 71.2 |
Find 129 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGAACACGCCTTAAATT+TGG | 0.135492 | 1.3:-54471985 | MS.gene85555:intron |
| CACTTGCAGGCCCAAATTTA+AGG | 0.151414 | 1.3:+54471974 | None:intergenic |
| AAGCTTTGGTTCTTCTAAAT+TGG | 0.191035 | 1.3:+54473491 | None:intergenic |
| GATTCACTATCATTTATATT+TGG | 0.218419 | 1.3:+54470118 | None:intergenic |
| TGCCTGTCGTTCTCACTTGC+AGG | 0.243993 | 1.3:+54471961 | None:intergenic |
| CGTTGCATCATGCAGCTAAA+AGG | 0.250321 | 1.3:-54474507 | MS.gene85555:CDS |
| AGAAGTTGTAGCTCCTAATT+TGG | 0.266022 | 1.3:-54474071 | MS.gene85555:CDS |
| TGGATAGCCATAGCCAATTC+TGG | 0.277837 | 1.3:+54470256 | None:intergenic |
| GGTTGGCTGCGGGAGTTTCA+TGG | 0.281370 | 1.3:-54474106 | MS.gene85555:CDS |
| GAAGAGCTTGCTTCAGAGTT+TGG | 0.293413 | 1.3:+54470181 | None:intergenic |
| TGAGGTTAAAACAAAGAATT+GGG | 0.294889 | 1.3:-54469774 | MS.gene85555:CDS |
| ATGAGGTTAAAACAAAGAAT+TGG | 0.302104 | 1.3:-54469775 | MS.gene85555:CDS |
| CAGGAACACGCCTTAAATTT+GGG | 0.324205 | 1.3:-54471984 | MS.gene85555:CDS |
| CACTGCACTCACTCCATTGA+TGG | 0.333965 | 1.3:+54470159 | None:intergenic |
| GCTGATGAGGTTCAATTAGA+TGG | 0.335233 | 1.3:-54469989 | MS.gene85555:CDS |
| TGCCGTATATGCTTCTTTGC+AGG | 0.336829 | 1.3:-54473852 | MS.gene85555:intron |
| CTCTACCAGCAAGTCAGTTA+TGG | 0.338395 | 1.3:-54475426 | MS.gene85555:CDS |
| TCAGAGTTTGGCTGGGCATC+AGG | 0.351086 | 1.3:+54470193 | None:intergenic |
| CTGCGGGAGTTTCATGGACC+TGG | 0.365876 | 1.3:-54474100 | MS.gene85555:CDS |
| AAACTCCTCTTGAGGTTGCC+AGG | 0.377606 | 1.3:-54474322 | MS.gene85555:CDS |
| AGCTTGCTTCAGAGTTTGGC+TGG | 0.380261 | 1.3:+54470185 | None:intergenic |
| AATCCAGATCGCTAGTAGTA+TGG | 0.382236 | 1.3:+54470035 | None:intergenic |
| GGCTGGGCATCAGGAAAGCT+TGG | 0.386071 | 1.3:+54470202 | None:intergenic |
| CAGAGACATTGTCATCGTTC+TGG | 0.390306 | 1.3:+54470062 | None:intergenic |
| ATACCCTGTGGCCATGTTGC+TGG | 0.393443 | 1.3:-54469815 | MS.gene85555:CDS |
| AGTGAATCTGTAGCTGTTCC+AGG | 0.401139 | 1.3:-54470103 | MS.gene85555:CDS |
| GGTATGCATGCCCCTTCTGC+TGG | 0.401899 | 1.3:+54469833 | None:intergenic |
| ACGACAGGCAACAACTTACT+TGG | 0.413535 | 1.3:-54471948 | MS.gene85555:CDS |
| GGATCCGACTGACGAAGCTT+TGG | 0.419385 | 1.3:+54473477 | None:intergenic |
| AATTCCCATAACTGACTTGC+TGG | 0.419828 | 1.3:+54475421 | None:intergenic |
| TTAGGCAGCTTCTCAACTAC+TGG | 0.421097 | 1.3:+54469914 | None:intergenic |
| TCTATCTTAGCTCGACAAAC+GGG | 0.421859 | 1.3:+54469746 | None:intergenic |
| GGAGATGATGATACATCAAC+AGG | 0.423216 | 1.3:+54469935 | None:intergenic |
| CTTGAGGTTGCCAGGGCTAA+AGG | 0.424814 | 1.3:-54474314 | MS.gene85555:CDS |
| TGATGCTGAAGACCCAGAAT+TGG | 0.426429 | 1.3:-54470269 | MS.gene85555:CDS |
| TACCTGCAAAGAAGCATATA+CGG | 0.427230 | 1.3:+54473850 | None:intergenic |
| TCAATTGACGGATAATGAAC+CGG | 0.432048 | 1.3:+54469965 | None:intergenic |
| AGCTCCTCCATTTGCTGATG+AGG | 0.435211 | 1.3:-54470002 | MS.gene85555:CDS |
| GTTGCATCATGCAGCTAAAA+GGG | 0.441106 | 1.3:-54474506 | MS.gene85555:CDS |
| AGTCATATATGCTTGTTCTC+TGG | 0.441885 | 1.3:-54474127 | MS.gene85555:CDS |
| TCTACCAGCAAGTCAGTTAT+GGG | 0.446802 | 1.3:-54475425 | MS.gene85555:CDS |
| AATTCTGGGTCTTCAGCATC+AGG | 0.447859 | 1.3:+54470271 | None:intergenic |
| ATTAAGCTGTATCACGTTTG+AGG | 0.449366 | 1.3:-54469716 | None:intergenic |
| GTCTATCTTAGCTCGACAAA+CGG | 0.449791 | 1.3:+54469745 | None:intergenic |
| GCTAAGACTTTGATTGAACT+TGG | 0.450229 | 1.3:-54475143 | MS.gene85555:CDS |
| CGTGATACAGCTTAATGATC+TGG | 0.455410 | 1.3:+54469723 | None:intergenic |
| CTTGTTCTCTGGTTGGCTGC+GGG | 0.456950 | 1.3:-54474116 | MS.gene85555:CDS |
| TTAAGCTGTATCACGTTTGA+GGG | 0.457907 | 1.3:-54469715 | None:intergenic |
| GGGAAAACTGCTGGTGGAAG+TGG | 0.460655 | 1.3:-54469884 | MS.gene85555:CDS |
| GAAGCAAGCTCTTCCATCAA+TGG | 0.462014 | 1.3:-54470172 | MS.gene85555:CDS |
| GGATAGCCATAGCCAATTCT+GGG | 0.476030 | 1.3:+54470257 | None:intergenic |
| GCTTGTTCTCTGGTTGGCTG+CGG | 0.481596 | 1.3:-54474117 | MS.gene85555:CDS |
| GACCTGCACCTTCTCTATGA+AGG | 0.483252 | 1.3:+54475382 | None:intergenic |
| TTAGCAACATTATAAAGCTC+AGG | 0.486620 | 1.3:+54475161 | None:intergenic |
| ATTCATACAAGCAACAATCA+AGG | 0.490822 | 1.3:+54475184 | None:intergenic |
| TACTGTTTAGGTCGTCATGC+TGG | 0.493590 | 1.3:-54474535 | MS.gene85555:intron |
| GCATCAGGTGGTGCTGTTGG+TGG | 0.494969 | 1.3:+54470286 | None:intergenic |
| CAATGTTGTTCGTGTAATTG+AGG | 0.495037 | 1.3:-54474285 | MS.gene85555:intron |
| AATTGAACCTCATCAGCAAA+TGG | 0.497107 | 1.3:+54469995 | None:intergenic |
| TCAGCAAATGGAGGAGCTGA+TGG | 0.498422 | 1.3:+54470007 | None:intergenic |
| GAGAAGCTGCCTAATGAAGA+AGG | 0.498934 | 1.3:-54469905 | MS.gene85555:CDS |
| AACGATGACAATGTCTCTGC+TGG | 0.501010 | 1.3:-54470058 | MS.gene85555:CDS |
| ACGGCAAGCTCCAACTTGTA+AGG | 0.506261 | 1.3:+54473869 | None:intergenic |
| TCAGCATCAGGTGGTGCTGT+TGG | 0.507958 | 1.3:+54470283 | None:intergenic |
| ATCATTCATGAGCAAAGGAT+TGG | 0.511067 | 1.3:+54474352 | None:intergenic |
| TGCTTAGATGCTCCAGCAGA+AGG | 0.513582 | 1.3:-54469845 | MS.gene85555:CDS |
| GCATCCAGCAACATGGCCAC+AGG | 0.518302 | 1.3:+54469811 | None:intergenic |
| GGTGCTGTTGGTGGAACTGT+AGG | 0.521989 | 1.3:+54470295 | None:intergenic |
| GGCCTGCAAGTGAGAACGAC+AGG | 0.524664 | 1.3:-54471963 | MS.gene85555:CDS |
| TGGCCATACTACTAGCGATC+TGG | 0.525382 | 1.3:-54470038 | MS.gene85555:CDS |
| ATATATGCTTGTTCTCTGGT+TGG | 0.525496 | 1.3:-54474123 | MS.gene85555:CDS |
| ATGAAGGGCTTTAATTCCAT+CGG | 0.528455 | 1.3:+54475398 | None:intergenic |
| CCACAGAGGAATAATTGTAC+GGG | 0.536052 | 1.3:+54473518 | None:intergenic |
| ATTGCTGTTTCCTTTAGCCC+TGG | 0.537924 | 1.3:+54474304 | None:intergenic |
| GCTACAACTTCTAGAAATCC+AGG | 0.538093 | 1.3:+54474082 | None:intergenic |
| ATGCATGTCTTGCTTGAATG+AGG | 0.538648 | 1.3:-54469792 | MS.gene85555:CDS |
| AATGTCAATGCGTACCGCCC+TGG | 0.541901 | 1.3:-54475116 | MS.gene85555:intron |
| GTGAGAACACGGGAGCCTAC+TGG | 0.546389 | 1.3:+54473896 | None:intergenic |
| TGAGGTTCAATTAGATGGCC+CGG | 0.548473 | 1.3:-54469984 | MS.gene85555:CDS |
| TCCACAGAGGAATAATTGTA+CGG | 0.553131 | 1.3:+54473517 | None:intergenic |
| CAATCTTCTTCGCAGTTGGG+TGG | 0.553832 | 1.3:-54473927 | MS.gene85555:intron |
| TACAATTATTCCTCTGTGGA+AGG | 0.555207 | 1.3:-54473514 | MS.gene85555:CDS |
| GCTTAGATGCTCCAGCAGAA+GGG | 0.556977 | 1.3:-54469844 | MS.gene85555:CDS |
| AACTCCTCTTGAGGTTGCCA+GGG | 0.559206 | 1.3:-54474321 | MS.gene85555:CDS |
| GTCAGTTATGGGAATTCCGA+TGG | 0.562074 | 1.3:-54475414 | MS.gene85555:CDS |
| CAATTGACGGATAATGAACC+GGG | 0.562129 | 1.3:+54469966 | None:intergenic |
| GAACATGCTGAATAGATGCT+TGG | 0.563240 | 1.3:+54470236 | None:intergenic |
| ACAGGGCTCAAATCAATTGA+CGG | 0.563507 | 1.3:+54469953 | None:intergenic |
| TAGAGAAGGTGCAGGTCTTG+AGG | 0.564468 | 1.3:-54475376 | MS.gene85555:intron |
| CAATCATCATTCATGAGCAA+AGG | 0.567314 | 1.3:+54474347 | None:intergenic |
| CTTAGATGCTCCAGCAGAAG+GGG | 0.571526 | 1.3:-54469843 | MS.gene85555:CDS |
| TCTCACCACGCCTTACAAGT+TGG | 0.576677 | 1.3:-54473879 | MS.gene85555:CDS |
| TTAGCCCTGGCAACCTCAAG+AGG | 0.577389 | 1.3:+54474317 | None:intergenic |
| AATGAAGAAGGGAAAACTGC+TGG | 0.579235 | 1.3:-54469893 | MS.gene85555:CDS |
| GCTTGCTTCAGAGTTTGGCT+GGG | 0.579363 | 1.3:+54470186 | None:intergenic |
| TGTAAGGCGTGGTGAGAACA+CGG | 0.579745 | 1.3:+54473885 | None:intergenic |
| TTCATACAAGCAACAATCAA+GGG | 0.581059 | 1.3:+54475185 | None:intergenic |
| ACCTGCACCTTCTCTATGAA+GGG | 0.586820 | 1.3:+54475383 | None:intergenic |
| TGCTTGCAAAGGAATGCCGC+AGG | 0.587078 | 1.3:-54471917 | MS.gene85555:intron |
| TTCAGCATGTTCTTCACGAG+AGG | 0.588546 | 1.3:-54470225 | MS.gene85555:CDS |
| ATGCAGTGGATGGATAGAGA+AGG | 0.590537 | 1.3:-54475215 | MS.gene85555:intron |
| GCCCTTCATAGAGAAGGTGC+AGG | 0.592323 | 1.3:-54475384 | MS.gene85555:CDS |
| TGAAGACCCAGAATTGGCTA+TGG | 0.592995 | 1.3:-54470263 | MS.gene85555:CDS |
| AGAACCAAAGCTTCGTCAGT+CGG | 0.596283 | 1.3:-54473481 | MS.gene85555:CDS |
| TCGTCAGTCGGATCCGTCAG+TGG | 0.615752 | 1.3:-54473469 | MS.gene85555:CDS |
| ATTAAAGCCCTTCATAGAGA+AGG | 0.618606 | 1.3:-54475390 | MS.gene85555:CDS |
| GAGGTTAAAACAAAGAATTG+GGG | 0.624802 | 1.3:-54469773 | MS.gene85555:CDS |
| AGAAGCTGCCTAATGAAGAA+GGG | 0.625613 | 1.3:-54469904 | MS.gene85555:CDS |
| CATCCAGCAACATGGCCACA+GGG | 0.625738 | 1.3:+54469812 | None:intergenic |
| AGGGCGGTACGCATTGACAT+TGG | 0.631721 | 1.3:+54475118 | None:intergenic |
| AAGCTCCAACTTGTAAGGCG+TGG | 0.636661 | 1.3:+54473874 | None:intergenic |
| AAGACATGCATCCAGCAACA+TGG | 0.637339 | 1.3:+54469804 | None:intergenic |
| TCTGGGTCTTCAGCATCAGG+TGG | 0.639139 | 1.3:+54470274 | None:intergenic |
| TGATTGTCAAACTCCTCTTG+AGG | 0.639941 | 1.3:-54474330 | MS.gene85555:CDS |
| AATGGAGTGAGTGCAGTGCA+AGG | 0.641104 | 1.3:-54470154 | MS.gene85555:CDS |
| CTATCTTAGCTCGACAAACG+GGG | 0.643254 | 1.3:+54469747 | None:intergenic |
| TTATCACTAATTGCCACTGA+CGG | 0.648792 | 1.3:+54473456 | None:intergenic |
| TTGCATCATGCAGCTAAAAG+GGG | 0.654948 | 1.3:-54474505 | MS.gene85555:CDS |
| CCCGTACAATTATTCCTCTG+TGG | 0.666032 | 1.3:-54473518 | MS.gene85555:CDS |
| GAAGAAGGGAAAACTGCTGG+TGG | 0.670517 | 1.3:-54469890 | MS.gene85555:CDS |
| GTAAGGCGTGGTGAGAACAC+GGG | 0.674398 | 1.3:+54473886 | None:intergenic |
| ACATGTTGAGTATTGCCACC+TGG | 0.679301 | 1.3:+54470085 | None:intergenic |
| TGAACCTCATCAGCAAATGG+AGG | 0.681472 | 1.3:+54469998 | None:intergenic |
| TCTAAATTGGCCTTCCACAG+AGG | 0.684982 | 1.3:+54473504 | None:intergenic |
| CACAGAGGAATAATTGTACG+GGG | 0.685048 | 1.3:+54473519 | None:intergenic |
| GAAGGGGCATGCATACCCTG+TGG | 0.706058 | 1.3:-54469827 | MS.gene85555:CDS |
| GAATCTGTAGCTGTTCCAGG+TGG | 0.733381 | 1.3:-54470100 | MS.gene85555:CDS |
| GAGATGATGATACATCAACA+GGG | 0.754586 | 1.3:+54469936 | None:intergenic |
| AAATGAGACGAATACCAGGG+CGG | 0.804340 | 1.3:+54475102 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATAATTTAACTAATTA+TGG | + | chr1.3:54471352-54471371 | None:intergenic | 10.0% |
| !! | ATATTTAAGAGAAAAATTAA+TGG | - | chr1.3:54471894-54471913 | MS.gene85555:intron | 10.0% |
| !! | ATTATTAATATACGAAATAA+GGG | + | chr1.3:54471985-54472004 | None:intergenic | 10.0% |
| !! | ATTGATTAATAAAATAAGTT+AGG | - | chr1.3:54474681-54474700 | MS.gene85555:intron | 10.0% |
| !! | CAAATTAAAAAAGAAAAATT+AGG | + | chr1.3:54472419-54472438 | None:intergenic | 10.0% |
| !! | TAAAACTAATCATAAAATAT+TGG | - | chr1.3:54473604-54473623 | MS.gene85555:intron | 10.0% |
| !!! | CATAAAATTAACATTTTTTA+TGG | + | chr1.3:54469847-54469866 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTGTAAACT+CGG | - | chr1.3:54472709-54472728 | MS.gene85555:intron | 10.0% |
| !! | AAAAATGTTAAACTATTACA+GGG | - | chr1.3:54471473-54471492 | MS.gene85555:intron | 15.0% |
| !! | AAAGTACACAAAAAATTAAA+GGG | + | chr1.3:54473016-54473035 | None:intergenic | 15.0% |
| !! | AATAAAGGAAATAAAGAAAA+TGG | + | chr1.3:54474611-54474630 | None:intergenic | 15.0% |
| !! | AATCATAAAATATTGGTAAA+GGG | - | chr1.3:54473611-54473630 | MS.gene85555:intron | 15.0% |
| !! | AATGTACTTCAAAAAAATAA+AGG | + | chr1.3:54474626-54474645 | None:intergenic | 15.0% |
| !! | ATAAAGGAAATAAAGAAAAT+GGG | + | chr1.3:54474610-54474629 | None:intergenic | 15.0% |
| !! | ATAATTAAACTAACATTTGA+TGG | + | chr1.3:54474513-54474532 | None:intergenic | 15.0% |
| !! | ATTTATGTTTACTTTATACA+TGG | - | chr1.3:54473068-54473087 | MS.gene85555:intron | 15.0% |
| !! | CATTATTAATATACGAAATA+AGG | + | chr1.3:54471986-54472005 | None:intergenic | 15.0% |
| !! | CCAATAAATGTTATTAATAT+GGG | - | chr1.3:54470778-54470797 | MS.gene85555:intron | 15.0% |
| !! | CTTATTTCGTATATTAATAA+TGG | - | chr1.3:54471984-54472003 | MS.gene85555:CDS | 15.0% |
| !! | TAATCATAAAATATTGGTAA+AGG | - | chr1.3:54473610-54473629 | MS.gene85555:intron | 15.0% |
| !! | TAATTAAACTAACATTTGAT+GGG | + | chr1.3:54474512-54474531 | None:intergenic | 15.0% |
| !! | TCCAATAAATGTTATTAATA+TGG | - | chr1.3:54470777-54470796 | MS.gene85555:intron | 15.0% |
| !!! | AAAAGTACACAAAAAATTAA+AGG | + | chr1.3:54473017-54473036 | None:intergenic | 15.0% |
| !!! | ATGATTAGTTTTATATGTTT+TGG | + | chr1.3:54473597-54473616 | None:intergenic | 15.0% |
| !!! | ATTTTTGCTATATAATAAAG+AGG | + | chr1.3:54473341-54473360 | None:intergenic | 15.0% |
| !!! | TAATTTTATGATTGTTATGA+TGG | - | chr1.3:54469857-54469876 | MS.gene85555:CDS | 15.0% |
| !!! | TTATTTTATTTTTTATGCAG+TGG | - | chr1.3:54469945-54469964 | MS.gene85555:CDS | 15.0% |
| !!! | TTTCTTTTTTAATTTGTTGA+GGG | - | chr1.3:54472423-54472442 | MS.gene85555:intron | 15.0% |
| !!! | TTTTCTTTTTTAATTTGTTG+AGG | - | chr1.3:54472422-54472441 | MS.gene85555:intron | 15.0% |
| !!! | TTTTTAACGTTTTATTATTG+TGG | - | chr1.3:54470926-54470945 | MS.gene85555:intron | 15.0% |
| !! | AAGCATAAATTAGTATACTA+CGG | - | chr1.3:54474580-54474599 | MS.gene85555:intron | 20.0% |
| !! | ACATAAGTTCTTAAAATGAT+GGG | - | chr1.3:54471012-54471031 | MS.gene85555:intron | 20.0% |
| !! | AGGTAGATATATAATGATAT+GGG | + | chr1.3:54471587-54471606 | None:intergenic | 20.0% |
| !! | ATGATTATGATAGGATATTA+TGG | - | chr1.3:54473699-54473718 | MS.gene85555:intron | 20.0% |
| !! | ATTAATATTTAACGTTGTGT+AGG | + | chr1.3:54473947-54473966 | None:intergenic | 20.0% |
| !! | CCCATATTAATAACATTTAT+TGG | + | chr1.3:54470781-54470800 | None:intergenic | 20.0% |
| !! | CGTAGTAGAAAATTAAAATA+AGG | + | chr1.3:54471450-54471469 | None:intergenic | 20.0% |
| !! | CTATTATGATTGGAATTAAA+TGG | - | chr1.3:54470149-54470168 | MS.gene85555:CDS | 20.0% |
| !! | GAAAAATGTTAAACTATTAC+AGG | - | chr1.3:54471472-54471491 | MS.gene85555:intron | 20.0% |
| !! | GAATAGGACTTATATTTAAA+TGG | - | chr1.3:54473663-54473682 | MS.gene85555:intron | 20.0% |
| !! | GATTCACTATCATTTATATT+TGG | + | chr1.3:54475059-54475078 | None:intergenic | 20.0% |
| !! | TACATAAGTTCTTAAAATGA+TGG | - | chr1.3:54471011-54471030 | MS.gene85555:intron | 20.0% |
| !! | TAGGTAGATATATAATGATA+TGG | + | chr1.3:54471588-54471607 | None:intergenic | 20.0% |
| !!! | AATCGCAGAAAATTTTAATT+TGG | + | chr1.3:54474316-54474335 | None:intergenic | 20.0% |
| !!! | AATTAGTTTTTCAAACTTCT+GGG | + | chr1.3:54474113-54474132 | None:intergenic | 20.0% |
| !!! | TAGAATTGATTTGACATATT+TGG | + | chr1.3:54470396-54470415 | None:intergenic | 20.0% |
| !!! | TATCTTCATTTTTTTCGTTT+TGG | - | chr1.3:54471787-54471806 | MS.gene85555:intron | 20.0% |
| !!! | TATTTTAATTTTCTACTACG+TGG | - | chr1.3:54471450-54471469 | MS.gene85555:intron | 20.0% |
| !!! | TGTTTTTGTCTTTTTTTGAT+GGG | - | chr1.3:54472914-54472933 | MS.gene85555:intron | 20.0% |
| ! | AAACATTGTAAAAACATGTG+AGG | - | chr1.3:54473844-54473863 | MS.gene85555:intron | 25.0% |
| ! | AAAGAAAAAGAAGTAAGTGT+AGG | + | chr1.3:54471760-54471779 | None:intergenic | 25.0% |
| ! | AAGTGTCTATATTTCAGAAA+TGG | - | chr1.3:54470738-54470757 | MS.gene85555:intron | 25.0% |
| ! | AAGTTTGAAAAACTAATTGC+AGG | - | chr1.3:54474115-54474134 | MS.gene85555:CDS | 25.0% |
| ! | AATAATCCTAGTGCAAATTT+CGG | + | chr1.3:54472801-54472820 | None:intergenic | 25.0% |
| ! | AATTAATGGAGAGAAAGATA+AGG | - | chr1.3:54471908-54471927 | MS.gene85555:intron | 25.0% |
| ! | ACAAAAGATCATATAAACTG+AGG | + | chr1.3:54470554-54470573 | None:intergenic | 25.0% |
| ! | AGCAAAAATCAAAACATCAA+TGG | - | chr1.3:54473352-54473371 | MS.gene85555:intron | 25.0% |
| ! | ATAAGAGTAGAGAAAGATAA+GGG | - | chr1.3:54472009-54472028 | MS.gene85555:intron | 25.0% |
| ! | ATAAGTCCTATTCAATTGTT+TGG | + | chr1.3:54473656-54473675 | None:intergenic | 25.0% |
| ! | ATGAGGTTAAAACAAAGAAT+TGG | - | chr1.3:54475399-54475418 | MS.gene85555:CDS | 25.0% |
| ! | ATTAATGGAGAGAAAGATAA+GGG | - | chr1.3:54471909-54471928 | MS.gene85555:intron | 25.0% |
| ! | CAAAGATCAATGAACAAATT+GGG | - | chr1.3:54474057-54474076 | MS.gene85555:intron | 25.0% |
| ! | CATCAAAAAAAGACAAAAAC+AGG | + | chr1.3:54472915-54472934 | None:intergenic | 25.0% |
| ! | GAACTCAAACATAAACATAA+AGG | + | chr1.3:54472626-54472645 | None:intergenic | 25.0% |
| ! | TAAACTTTCAACTACTGTTT+AGG | - | chr1.3:54470627-54470646 | MS.gene85555:intron | 25.0% |
| ! | TATACTGATGTTATTCTGTT+TGG | - | chr1.3:54473303-54473322 | MS.gene85555:intron | 25.0% |
| ! | TATGATTGGAATTAAATGGT+TGG | - | chr1.3:54470153-54470172 | MS.gene85555:CDS | 25.0% |
| ! | TCAAAATTTGGATTTGCATT+TGG | + | chr1.3:54472050-54472069 | None:intergenic | 25.0% |
| ! | TCAAACATAAACATAAAGGT+AGG | + | chr1.3:54472622-54472641 | None:intergenic | 25.0% |
| ! | TCAAAGATCAATGAACAAAT+TGG | - | chr1.3:54474056-54474075 | MS.gene85555:intron | 25.0% |
| ! | TGAGGTTAAAACAAAGAATT+GGG | - | chr1.3:54475400-54475419 | MS.gene85555:CDS | 25.0% |
| ! | TGATTATTATGCAAAAATGC+TGG | + | chr1.3:54474858-54474877 | None:intergenic | 25.0% |
| ! | TGATTCTGTAAAATTGTTTC+CGG | - | chr1.3:54470259-54470278 | MS.gene85555:CDS | 25.0% |
| ! | TTAAAACTAAAGAATCGAGT+TGG | - | chr1.3:54471535-54471554 | MS.gene85555:intron | 25.0% |
| ! | TTGTATAAACACTGAAATCA+AGG | + | chr1.3:54474553-54474572 | None:intergenic | 25.0% |
| ! | TTTAATGAGTTTATGATTGC+AGG | + | chr1.3:54472177-54472196 | None:intergenic | 25.0% |
| ! | TTTAGTACTAAGCATATGTT+TGG | + | chr1.3:54470456-54470475 | None:intergenic | 25.0% |
| ! | TTTGCTAATAAGCTAATTAC+CGG | + | chr1.3:54470120-54470139 | None:intergenic | 25.0% |
| !! | AAAGAACTTGGACATTTTAA+GGG | + | chr1.3:54473420-54473439 | None:intergenic | 25.0% |
| !! | ATTATGCTGACTATTATGAT+TGG | - | chr1.3:54470139-54470158 | MS.gene85555:CDS | 25.0% |
| !! | CTGTTATCCTTAATTTTTAC+GGG | - | chr1.3:54470579-54470598 | MS.gene85555:intron | 25.0% |
| !! | GAAGTAAGATAATGTTTTCT+GGG | - | chr1.3:54470510-54470529 | MS.gene85555:intron | 25.0% |
| !! | GCTGTTATCCTTAATTTTTA+CGG | - | chr1.3:54470578-54470597 | MS.gene85555:intron | 25.0% |
| !! | TAAAGAACTTGGACATTTTA+AGG | + | chr1.3:54473421-54473440 | None:intergenic | 25.0% |
| !! | TGAAGTAAGATAATGTTTTC+TGG | - | chr1.3:54470509-54470528 | MS.gene85555:intron | 25.0% |
| !! | TTGTAATTCATGCTACATTT+TGG | + | chr1.3:54473541-54473560 | None:intergenic | 25.0% |
| !!! | AAAGTATTTTTCCCACTAAA+CGG | + | chr1.3:54473752-54473771 | None:intergenic | 25.0% |
| !!! | AAATATCAAGTTTTGTCCAA+TGG | + | chr1.3:54470214-54470233 | None:intergenic | 25.0% |
| !!! | ACATTGAAAGCTTATTTTGA+TGG | - | chr1.3:54472951-54472970 | MS.gene85555:intron | 25.0% |
| !!! | AGTTTTATATGTTTTGGACT+TGG | + | chr1.3:54473591-54473610 | None:intergenic | 25.0% |
| !!! | CAATTAGTTTTTCAAACTTC+TGG | + | chr1.3:54474114-54474133 | None:intergenic | 25.0% |
| !!! | CATAGTTCTAAAAAACCAAA+GGG | + | chr1.3:54473098-54473117 | None:intergenic | 25.0% |
| !!! | CATTGAAAGCTTATTTTGAT+GGG | - | chr1.3:54472952-54472971 | MS.gene85555:intron | 25.0% |
| !!! | CTGTTTTTGTCTTTTTTTGA+TGG | - | chr1.3:54472913-54472932 | MS.gene85555:intron | 25.0% |
| !!! | GAATTTTTTATGAAGTACTG+AGG | - | chr1.3:54471931-54471950 | MS.gene85555:CDS | 25.0% |
| !!! | TTTATTTTTTATGCAGTGGA+TGG | - | chr1.3:54469949-54469968 | MS.gene85555:CDS | 25.0% |
| !!! | TTTTTTGTAAACTCGGTATA+TGG | - | chr1.3:54472716-54472735 | MS.gene85555:intron | 25.0% |
| AAACCTTTGCAAAAATCATC+TGG | + | chr1.3:54474743-54474762 | None:intergenic | 30.0% | |
| AAAGATGAACAGAAACAGAA+AGG | + | chr1.3:54472675-54472694 | None:intergenic | 30.0% | |
| AACCTTTGCAAAAATCATCT+GGG | + | chr1.3:54474742-54474761 | None:intergenic | 30.0% | |
| AAGCATCTAATTAAATGAGC+AGG | - | chr1.3:54471624-54471643 | MS.gene85555:intron | 30.0% | |
| AATAAAGGACTTGACTTTAG+AGG | - | chr1.3:54473988-54474007 | MS.gene85555:intron | 30.0% | |
| AGGGATCTAAGAAAAACTAT+AGG | - | chr1.3:54473630-54473649 | MS.gene85555:intron | 30.0% | |
| ATAAAGGACTTGACTTTAGA+GGG | - | chr1.3:54473989-54474008 | MS.gene85555:intron | 30.0% | |
| ATAATCCTAGTGCAAATTTC+GGG | + | chr1.3:54472800-54472819 | None:intergenic | 30.0% | |
| ATATGTGCCCGTAAAAATTA+AGG | + | chr1.3:54470589-54470608 | None:intergenic | 30.0% | |
| ATCATATAAACTGAGGAATG+TGG | + | chr1.3:54470547-54470566 | None:intergenic | 30.0% | |
| ATTCATACAAGCAACAATCA+AGG | + | chr1.3:54469993-54470012 | None:intergenic | 30.0% | |
| ATTTGGATTTGCATTTGGTT+TGG | + | chr1.3:54472045-54472064 | None:intergenic | 30.0% | |
| CAAAATAGAGAAGAAGAACT+TGG | + | chr1.3:54472544-54472563 | None:intergenic | 30.0% | |
| CAATAAATGGTGCAAACATT+CGG | - | chr1.3:54474465-54474484 | MS.gene85555:intron | 30.0% | |
| CAATCAACAACAAAATCCAA+TGG | + | chr1.3:54469916-54469935 | None:intergenic | 30.0% | |
| CATTTGATGTGTAACATAAC+TGG | - | chr1.3:54474783-54474802 | MS.gene85555:intron | 30.0% | |
| CTAAAGTCAAGTCCTTTATT+TGG | + | chr1.3:54473988-54474007 | None:intergenic | 30.0% | |
| CTGGAAAAATCAAAAGTTCA+GGG | + | chr1.3:54474829-54474848 | None:intergenic | 30.0% | |
| CTTTGTGAGAACATACAAAT+AGG | + | chr1.3:54471607-54471626 | None:intergenic | 30.0% | |
| GAAGATAAACAGTTAGAAAC+TGG | + | chr1.3:54474659-54474678 | None:intergenic | 30.0% | |
| GAGGTTAAAACAAAGAATTG+GGG | - | chr1.3:54475401-54475420 | MS.gene85555:CDS | 30.0% | |
| GATAAGAGTAGAGAAAGATA+AGG | - | chr1.3:54472008-54472027 | MS.gene85555:intron | 30.0% | |
| GCATTATAACTGAACTGATT+TGG | + | chr1.3:54474409-54474428 | None:intergenic | 30.0% | |
| GTTATGATGGTTATGATGAT+GGG | - | chr1.3:54469870-54469889 | MS.gene85555:CDS | 30.0% | |
| GTTTAGTGGGAAAAATACTT+TGG | - | chr1.3:54473751-54473770 | MS.gene85555:intron | 30.0% | |
| TAAACTAACATTTGATGGGA+AGG | + | chr1.3:54474508-54474527 | None:intergenic | 30.0% | |
| TAACAGTGCGTTTCAAAATT+TGG | + | chr1.3:54472062-54472081 | None:intergenic | 30.0% | |
| TAGAGATAAGATTAGATGCT+TGG | + | chr1.3:54473457-54473476 | None:intergenic | 30.0% | |
| TATAGGCCAAACAATTGAAT+AGG | - | chr1.3:54473647-54473666 | MS.gene85555:intron | 30.0% | |
| TATCTTGAAAAATGCTAGAG+TGG | - | chr1.3:54474290-54474309 | MS.gene85555:CDS | 30.0% | |
| TCAATGAACAAATTGGGAAT+TGG | - | chr1.3:54474063-54474082 | MS.gene85555:CDS | 30.0% | |
| TCATCAGACATGATTATGAT+AGG | - | chr1.3:54473690-54473709 | MS.gene85555:intron | 30.0% | |
| TCTATTTGGTCTAAAGAACT+TGG | + | chr1.3:54473432-54473451 | None:intergenic | 30.0% | |
| TGAGTGTAACTCAACATTTA+AGG | + | chr1.3:54473505-54473524 | None:intergenic | 30.0% | |
| TGTAAGAAACATGAATGTTG+TGG | - | chr1.3:54470181-54470200 | MS.gene85555:CDS | 30.0% | |
| TGTTATGATGGTTATGATGA+TGG | - | chr1.3:54469869-54469888 | MS.gene85555:CDS | 30.0% | |
| TTAGATGCTTGGTTTCTATT+TGG | + | chr1.3:54473446-54473465 | None:intergenic | 30.0% | |
| TTAGCAACATTATAAAGCTC+AGG | + | chr1.3:54470016-54470035 | None:intergenic | 30.0% | |
| TTCATACAAGCAACAATCAA+GGG | + | chr1.3:54469992-54470011 | None:intergenic | 30.0% | |
| TTTATACATGGTATACCCTT+TGG | - | chr1.3:54473080-54473099 | MS.gene85555:intron | 30.0% | |
| ! | AAGTATTTTTCCCACTAAAC+GGG | + | chr1.3:54473751-54473770 | None:intergenic | 30.0% |
| ! | ACTTTTCTCGATACCAAATT+AGG | + | chr1.3:54471119-54471138 | None:intergenic | 30.0% |
| ! | CTTCTGCATTTTCTATGTTA+TGG | - | chr1.3:54471176-54471195 | MS.gene85555:intron | 30.0% |
| ! | GTTAAGTTACTTCTTTTGCA+TGG | - | chr1.3:54470705-54470724 | MS.gene85555:intron | 30.0% |
| ! | GTTTATGTTTGAGTTCTTCT+TGG | - | chr1.3:54472630-54472649 | MS.gene85555:intron | 30.0% |
| ! | TCCAAACATAAGCTTTTAAC+CGG | + | chr1.3:54470281-54470300 | None:intergenic | 30.0% |
| ! | TTCGTTATTGTTTTCGATTC+CGG | - | chr1.3:54470098-54470117 | MS.gene85555:CDS | 30.0% |
| ! | TTTGGATTTGCATTTGGTTT+GGG | + | chr1.3:54472044-54472063 | None:intergenic | 30.0% |
| !! | AAGCTTTGGTTCTTCTAAAT+TGG | + | chr1.3:54471686-54471705 | None:intergenic | 30.0% |
| !! | ATGATGTGCTGCTAAATTTT+TGG | - | chr1.3:54474141-54474160 | MS.gene85555:intron | 30.0% |
| !! | CCATAGTTCTAAAAAACCAA+AGG | + | chr1.3:54473099-54473118 | None:intergenic | 30.0% |
| !! | GCTGCTAAATTTTTGGATTA+AGG | - | chr1.3:54474148-54474167 | MS.gene85555:intron | 30.0% |
| !!! | CCTTTGGTTTTTTAGAACTA+TGG | - | chr1.3:54473096-54473115 | MS.gene85555:intron | 30.0% |
| AAACTAATTGTGACAAGGCA+TGG | + | chr1.3:54471817-54471836 | None:intergenic | 35.0% | |
| AACAAAATGAGACGAATACC+AGG | + | chr1.3:54470079-54470098 | None:intergenic | 35.0% | |
| AACACATATGTTGAGGGATT+TGG | + | chr1.3:54473388-54473407 | None:intergenic | 35.0% | |
| AACATTTAAGGAGGTTCCTT+TGG | + | chr1.3:54473493-54473512 | None:intergenic | 35.0% | |
| AAGCACCACATTCCAAATAA+AGG | - | chr1.3:54473973-54473992 | MS.gene85555:intron | 35.0% | |
| AATCCCTCAACATATGTGTT+AGG | - | chr1.3:54473388-54473407 | MS.gene85555:intron | 35.0% | |
| AATTGAACCTCATCAGCAAA+TGG | + | chr1.3:54475182-54475201 | None:intergenic | 35.0% | |
| ACAAAATGAGACGAATACCA+GGG | + | chr1.3:54470078-54470097 | None:intergenic | 35.0% | |
| ACATTTAAGGAGGTTCCTTT+GGG | + | chr1.3:54473492-54473511 | None:intergenic | 35.0% | |
| ACCCAAAACTAATTGTGACA+AGG | + | chr1.3:54471822-54471841 | None:intergenic | 35.0% | |
| AGAAGTTGTAGCTCCTAATT+TGG | - | chr1.3:54471103-54471122 | MS.gene85555:intron | 35.0% | |
| AGCAATATGTTTGCAGCATT+TGG | - | chr1.3:54474342-54474361 | MS.gene85555:CDS | 35.0% | |
| AGTAAACAAAACAACCCACA+TGG | + | chr1.3:54472886-54472905 | None:intergenic | 35.0% | |
| AGTAAGTGTAGGAGATTTAC+TGG | + | chr1.3:54471749-54471768 | None:intergenic | 35.0% | |
| AGTCATATATGCTTGTTCTC+TGG | - | chr1.3:54471047-54471066 | MS.gene85555:intron | 35.0% | |
| ATATATGCTTGTTCTCTGGT+TGG | - | chr1.3:54471051-54471070 | MS.gene85555:intron | 35.0% | |
| ATCATTCATGAGCAAAGGAT+TGG | + | chr1.3:54470825-54470844 | None:intergenic | 35.0% | |
| ATCCCTCAACATATGTGTTA+GGG | - | chr1.3:54473389-54473408 | MS.gene85555:intron | 35.0% | |
| ATGAACAGAAACAGAAAGGA+AGG | + | chr1.3:54472671-54472690 | None:intergenic | 35.0% | |
| ATGTTGTGGTAAATTGCCAT+TGG | - | chr1.3:54470195-54470214 | MS.gene85555:CDS | 35.0% | |
| ATTAAAGCCCTTCATAGAGA+AGG | - | chr1.3:54469784-54469803 | MS.gene85555:CDS | 35.0% | |
| CAAATCAATTCTACACTTCC+AGG | - | chr1.3:54470403-54470422 | MS.gene85555:intron | 35.0% | |
| CAATCATCATTCATGAGCAA+AGG | + | chr1.3:54470830-54470849 | None:intergenic | 35.0% | |
| CAATGTTGTTCGTGTAATTG+AGG | - | chr1.3:54470889-54470908 | MS.gene85555:intron | 35.0% | |
| CCTGGAAAAATCAAAAGTTC+AGG | + | chr1.3:54474830-54474849 | None:intergenic | 35.0% | |
| CCTTCCTGAAAACCAATAAA+TGG | - | chr1.3:54474452-54474471 | MS.gene85555:intron | 35.0% | |
| CGAATGTTTGCACCATTTAT+TGG | + | chr1.3:54474467-54474486 | None:intergenic | 35.0% | |
| GAGAAAGATAAGGGAAATTG+AGG | - | chr1.3:54472018-54472037 | MS.gene85555:intron | 35.0% | |
| GAGATGATGATACATCAACA+GGG | + | chr1.3:54475241-54475260 | None:intergenic | 35.0% | |
| GCTAAGACTTTGATTGAACT+TGG | - | chr1.3:54470031-54470050 | MS.gene85555:CDS | 35.0% | |
| GGTACTGTATGAAGTTGAAT+GGG | - | chr1.3:54470947-54470966 | MS.gene85555:intron | 35.0% | |
| GTAAACAAAACAACCCACAT+GGG | + | chr1.3:54472885-54472904 | None:intergenic | 35.0% | |
| GTGTAACTCAACATTTAAGG+AGG | + | chr1.3:54473502-54473521 | None:intergenic | 35.0% | |
| TAAGTCTATGTTCCATTGAC+AGG | - | chr1.3:54471406-54471425 | MS.gene85555:intron | 35.0% | |
| TACAATTATTCCTCTGTGGA+AGG | - | chr1.3:54471660-54471679 | MS.gene85555:intron | 35.0% | |
| TAGTGGGAAAAATACTTTGG+TGG | - | chr1.3:54473754-54473773 | MS.gene85555:intron | 35.0% | |
| TATACATACCACAGATGTCA+GGG | - | chr1.3:54473891-54473910 | MS.gene85555:CDS | 35.0% | |
| TCCACAGAGGAATAATTGTA+CGG | + | chr1.3:54471660-54471679 | None:intergenic | 35.0% | |
| TCCGGTTAAAAGCTTATGTT+TGG | - | chr1.3:54470277-54470296 | MS.gene85555:CDS | 35.0% | |
| TGAAATCAAGGTCAAATGTC+AGG | + | chr1.3:54474541-54474560 | None:intergenic | 35.0% | |
| TGCTATTAGCTGTTGAAAAG+CGG | - | chr1.3:54472316-54472335 | MS.gene85555:intron | 35.0% | |
| TGGTACTGTATGAAGTTGAA+TGG | - | chr1.3:54470946-54470965 | MS.gene85555:intron | 35.0% | |
| TTATCACTAATTGCCACTGA+CGG | + | chr1.3:54471721-54471740 | None:intergenic | 35.0% | |
| TTCAAACTTCTTCCTGTCAA+TGG | + | chr1.3:54471421-54471440 | None:intergenic | 35.0% | |
| TTGTAAAAACATGTGAGGAC+TGG | - | chr1.3:54473849-54473868 | MS.gene85555:intron | 35.0% | |
| TTGTCAATAGCGTGCTATAA+CGG | - | chr1.3:54472216-54472235 | MS.gene85555:intron | 35.0% | |
| ! | AACCCAGATGATTTTTGCAA+AGG | - | chr1.3:54474737-54474756 | MS.gene85555:intron | 35.0% |
| ! | AAGTTACTTCTTTTGCATGG+AGG | - | chr1.3:54470708-54470727 | MS.gene85555:intron | 35.0% |
| ! | AGAACTATGGTTTTCCATAC+AGG | - | chr1.3:54473109-54473128 | MS.gene85555:intron | 35.0% |
| ! | AGTATTTTTCCCACTAAACG+GGG | + | chr1.3:54473750-54473769 | None:intergenic | 35.0% |
| ! | ATGAAGGGCTTTAATTCCAT+CGG | + | chr1.3:54469779-54469798 | None:intergenic | 35.0% |
| ! | ATTTTTATGTGCGCCTTTTC+AGG | - | chr1.3:54473171-54473190 | MS.gene85555:intron | 35.0% |
| ! | CAAGTCCTTTATTTGGAATG+TGG | + | chr1.3:54473981-54474000 | None:intergenic | 35.0% |
| ! | GAGGGTATATTGTTCAATTG+TGG | - | chr1.3:54472441-54472460 | MS.gene85555:intron | 35.0% |
| ! | GTAAGATAATGTTTTCTGGG+AGG | - | chr1.3:54470513-54470532 | MS.gene85555:intron | 35.0% |
| ! | TACCTGCAAAGAAGCATATA+CGG | + | chr1.3:54471327-54471346 | None:intergenic | 35.0% |
| ! | TCAATTGACGGATAATGAAC+CGG | + | chr1.3:54475212-54475231 | None:intergenic | 35.0% |
| ! | TGGTTTTCTAATGCTTGCAA+AGG | - | chr1.3:54473246-54473265 | MS.gene85555:intron | 35.0% |
| !! | CGCTATTTCTTGTGAATGTT+AGG | + | chr1.3:54473805-54473824 | None:intergenic | 35.0% |
| !! | CTACATTTTGGTGCGTATTA+TGG | + | chr1.3:54473529-54473548 | None:intergenic | 35.0% |
| !! | TATGTTTGGATCCACTTTTG+AGG | + | chr1.3:54470442-54470461 | None:intergenic | 35.0% |
| !! | TGCCTTGTCACAATTAGTTT+TGG | - | chr1.3:54471817-54471836 | MS.gene85555:intron | 35.0% |
| !!! | AGAGGGATTTTTTTCCTAGA+TGG | - | chr1.3:54474025-54474044 | MS.gene85555:intron | 35.0% |
| !!! | CCATTTATTGGTTTTCAGGA+AGG | + | chr1.3:54474455-54474474 | None:intergenic | 35.0% |
| !!! | CCTGAACTTTTGATTTTTCC+AGG | - | chr1.3:54474827-54474846 | MS.gene85555:intron | 35.0% |
| !!! | GCCTTGTCACAATTAGTTTT+GGG | - | chr1.3:54471818-54471837 | MS.gene85555:intron | 35.0% |
| !!! | GGTTAATGGTTTTGATCCAT+TGG | - | chr1.3:54469897-54469916 | MS.gene85555:CDS | 35.0% |
| !!! | TGCACCATTTATTGGTTTTC+AGG | + | chr1.3:54474459-54474478 | None:intergenic | 35.0% |
| AATAGCCTACATTCTCACTC+TGG | - | chr1.3:54474189-54474208 | MS.gene85555:intron | 40.0% | |
| AATCACATGTGACAAACCTG+CGG | + | chr1.3:54473276-54473295 | None:intergenic | 40.0% | |
| AATCCAGATCGCTAGTAGTA+TGG | + | chr1.3:54475142-54475161 | None:intergenic | 40.0% | |
| AATGAAGAAGGGAAAACTGC+TGG | - | chr1.3:54475281-54475300 | MS.gene85555:intron | 40.0% | |
| ACAGGGCTCAAATCAATTGA+CGG | + | chr1.3:54475224-54475243 | None:intergenic | 40.0% | |
| AGAAGCTGCCTAATGAAGAA+GGG | - | chr1.3:54475270-54475289 | MS.gene85555:intron | 40.0% | |
| AGAGCAAAGGACAACAACAA+TGG | + | chr1.3:54472574-54472593 | None:intergenic | 40.0% | |
| ATACATACCACAGATGTCAG+GGG | - | chr1.3:54473892-54473911 | MS.gene85555:CDS | 40.0% | |
| ATACCGCTAGAACTAGAAAG+TGG | - | chr1.3:54471856-54471875 | MS.gene85555:intron | 40.0% | |
| ATAGCCTACATTCTCACTCT+GGG | - | chr1.3:54474190-54474209 | MS.gene85555:intron | 40.0% | |
| ATGCATGTCTTGCTTGAATG+AGG | - | chr1.3:54475382-54475401 | MS.gene85555:CDS | 40.0% | |
| ATTGAGAGTAGCGTCAATAG+CGG | - | chr1.3:54472292-54472311 | MS.gene85555:intron | 40.0% | |
| CAATTTGGACTCCTCAAAAG+TGG | - | chr1.3:54470428-54470447 | MS.gene85555:intron | 40.0% | |
| CACAGAGGAATAATTGTACG+GGG | + | chr1.3:54471658-54471677 | None:intergenic | 40.0% | |
| CAGGAACACGCCTTAAATTT+GGG | - | chr1.3:54473190-54473209 | MS.gene85555:intron | 40.0% | |
| CCACAGAGGAATAATTGTAC+GGG | + | chr1.3:54471659-54471678 | None:intergenic | 40.0% | |
| CGTGATACAGCTTAATGATC+TGG | + | chr1.3:54475454-54475473 | None:intergenic | 40.0% | |
| CTACACTTCCAGGATCAATT+TGG | - | chr1.3:54470413-54470432 | MS.gene85555:intron | 40.0% | |
| CTCCCTAACACATATGTTGA+GGG | + | chr1.3:54473394-54473413 | None:intergenic | 40.0% | |
| GAACATGCTGAATAGATGCT+TGG | + | chr1.3:54474941-54474960 | None:intergenic | 40.0% | |
| GACATCTGTGGTATGTATAC+TGG | + | chr1.3:54473890-54473909 | None:intergenic | 40.0% | |
| GCTGATGAGGTTCAATTAGA+TGG | - | chr1.3:54475185-54475204 | MS.gene85555:CDS | 40.0% | |
| GGAGATGATGATACATCAAC+AGG | + | chr1.3:54475242-54475261 | None:intergenic | 40.0% | |
| GTATACATACCACAGATGTC+AGG | - | chr1.3:54473890-54473909 | MS.gene85555:CDS | 40.0% | |
| GTCTATCTTAGCTCGACAAA+CGG | + | chr1.3:54475432-54475451 | None:intergenic | 40.0% | |
| GTTGCATCATGCAGCTAAAA+GGG | - | chr1.3:54470668-54470687 | MS.gene85555:intron | 40.0% | |
| TAAACGGGGTTAGAGATACA+TGG | + | chr1.3:54473736-54473755 | None:intergenic | 40.0% | |
| TAAACTCGGTATATGGTCCA+AGG | - | chr1.3:54472723-54472742 | MS.gene85555:intron | 40.0% | |
| TATCTCTAACCCCGTTTAGT+GGG | - | chr1.3:54473738-54473757 | MS.gene85555:intron | 40.0% | |
| TCAGGAACACGCCTTAAATT+TGG | - | chr1.3:54473189-54473208 | MS.gene85555:intron | 40.0% | |
| TCTACCAGCAAGTCAGTTAT+GGG | - | chr1.3:54469749-54469768 | MS.gene85555:CDS | 40.0% | |
| TCTATCTTAGCTCGACAAAC+GGG | + | chr1.3:54475431-54475450 | None:intergenic | 40.0% | |
| TCTCCCTAACACATATGTTG+AGG | + | chr1.3:54473395-54473414 | None:intergenic | 40.0% | |
| TCTGGGTCTGTTATGAAAGA+AGG | - | chr1.3:54474207-54474226 | MS.gene85555:intron | 40.0% | |
| TGATTGTCAAACTCCTCTTG+AGG | - | chr1.3:54470844-54470863 | MS.gene85555:intron | 40.0% | |
| TGGGAAAAATACTTTGGTGG+TGG | - | chr1.3:54473757-54473776 | MS.gene85555:intron | 40.0% | |
| TGTCAATCTTCTTCGCAGTT+GGG | - | chr1.3:54471244-54471263 | MS.gene85555:intron | 40.0% | |
| TGTGAATGTTAGGCATACCT+TGG | + | chr1.3:54473795-54473814 | None:intergenic | 40.0% | |
| TTGCATCATGCAGCTAAAAG+GGG | - | chr1.3:54470669-54470688 | MS.gene85555:intron | 40.0% | |
| TTGTCAATCTTCTTCGCAGT+TGG | - | chr1.3:54471243-54471262 | MS.gene85555:intron | 40.0% | |
| ! | ACTTCTTTTGCATGGAGGTA+TGG | - | chr1.3:54470713-54470732 | MS.gene85555:intron | 40.0% |
| ! | ATGGCGGCTATTGCAATTTT+GGG | - | chr1.3:54472376-54472395 | MS.gene85555:intron | 40.0% |
| ! | CAATTGACGGATAATGAACC+GGG | + | chr1.3:54475211-54475230 | None:intergenic | 40.0% |
| ! | CTTTGAGCTACTTTCCATCT+AGG | + | chr1.3:54474042-54474061 | None:intergenic | 40.0% |
| ! | GCAGTTTTCCCTTCTTCATT+AGG | + | chr1.3:54475281-54475300 | None:intergenic | 40.0% |
| ! | GCTACAACTTCTAGAAATCC+AGG | + | chr1.3:54471095-54471114 | None:intergenic | 40.0% |
| ! | TTTAAGGCGTGTTCCTGAAA+AGG | + | chr1.3:54473187-54473206 | None:intergenic | 40.0% |
| !! | AATTCCCATAACTGACTTGC+TGG | + | chr1.3:54469756-54469775 | None:intergenic | 40.0% |
| !! | ATGGTTATGATGATGGGTTG+TGG | - | chr1.3:54469876-54469895 | MS.gene85555:CDS | 40.0% |
| !! | CTACCACTTTCTAGTTCTAG+CGG | + | chr1.3:54471862-54471881 | None:intergenic | 40.0% |
| !! | CTTTTAGCTGCATGATGCAA+CGG | + | chr1.3:54470669-54470688 | None:intergenic | 40.0% |
| !! | TGATGATGGGTTGTGGTTAA+TGG | - | chr1.3:54469883-54469902 | MS.gene85555:CDS | 40.0% |
| !!! | TCGAGTTGGTGCTTTTCATT+TGG | - | chr1.3:54471549-54471568 | MS.gene85555:intron | 40.0% |
| AAATGAGACGAATACCAGGG+CGG | + | chr1.3:54470075-54470094 | None:intergenic | 45.0% | |
| AACGATGACAATGTCTCTGC+TGG | - | chr1.3:54475116-54475135 | MS.gene85555:intron | 45.0% | |
| AAGACATGCATCCAGCAACA+TGG | + | chr1.3:54475373-54475392 | None:intergenic | 45.0% | |
| AATTCTGGGTCTTCAGCATC+AGG | + | chr1.3:54474906-54474925 | None:intergenic | 45.0% | |
| ACAAAACAACCCACATGGGT+TGG | + | chr1.3:54472881-54472900 | None:intergenic | 45.0% | |
| ACCTGCACCTTCTCTATGAA+GGG | + | chr1.3:54469794-54469813 | None:intergenic | 45.0% | |
| ACGACAGGCAACAACTTACT+TGG | - | chr1.3:54473226-54473245 | MS.gene85555:intron | 45.0% | |
| AGAACCAAAGCTTCGTCAGT+CGG | - | chr1.3:54471693-54471712 | MS.gene85555:intron | 45.0% | |
| AGTGAATCTGTAGCTGTTCC+AGG | - | chr1.3:54475071-54475090 | MS.gene85555:intron | 45.0% | |
| ATGCAGTGGATGGATAGAGA+AGG | - | chr1.3:54469959-54469978 | MS.gene85555:CDS | 45.0% | |
| ATGGCAGAACTCAAACTCCA+AGG | + | chr1.3:54472504-54472523 | None:intergenic | 45.0% | |
| CACTTGCAGGCCCAAATTTA+AGG | + | chr1.3:54473203-54473222 | None:intergenic | 45.0% | |
| CAGAGACATTGTCATCGTTC+TGG | + | chr1.3:54475115-54475134 | None:intergenic | 45.0% | |
| CCCGTACAATTATTCCTCTG+TGG | - | chr1.3:54471656-54471675 | MS.gene85555:intron | 45.0% | |
| CGTTGCATCATGCAGCTAAA+AGG | - | chr1.3:54470667-54470686 | MS.gene85555:intron | 45.0% | |
| CTACTCTCAATGGTGCTTCA+CGG | + | chr1.3:54472283-54472302 | None:intergenic | 45.0% | |
| CTATATCAGCACTGTCCCAA+AGG | - | chr1.3:54473474-54473493 | MS.gene85555:CDS | 45.0% | |
| CTATCTTAGCTCGACAAACG+GGG | + | chr1.3:54475430-54475449 | None:intergenic | 45.0% | |
| CTCTACCAGCAAGTCAGTTA+TGG | - | chr1.3:54469748-54469767 | MS.gene85555:CDS | 45.0% | |
| GAAGCAAGCTCTTCCATCAA+TGG | - | chr1.3:54475002-54475021 | MS.gene85555:intron | 45.0% | |
| GAGAAGCTGCCTAATGAAGA+AGG | - | chr1.3:54475269-54475288 | MS.gene85555:intron | 45.0% | |
| GCAAAAATGCTGGACTTACC+TGG | + | chr1.3:54474848-54474867 | None:intergenic | 45.0% | |
| GCTATTGACGCTACTCTCAA+TGG | + | chr1.3:54472293-54472312 | None:intergenic | 45.0% | |
| GGATAGCCATAGCCAATTCT+GGG | + | chr1.3:54474920-54474939 | None:intergenic | 45.0% | |
| GTATCTCTAACCCCGTTTAG+TGG | - | chr1.3:54473737-54473756 | MS.gene85555:intron | 45.0% | |
| GTCAGTTATGGGAATTCCGA+TGG | - | chr1.3:54469760-54469779 | MS.gene85555:CDS | 45.0% | |
| GTGGTATGTATACTGGCACT+CGG | + | chr1.3:54473883-54473902 | None:intergenic | 45.0% | |
| TACATACCACAGATGTCAGG+GGG | - | chr1.3:54473893-54473912 | MS.gene85555:CDS | 45.0% | |
| TACTCTCAATGGTGCTTCAC+GGG | + | chr1.3:54472282-54472301 | None:intergenic | 45.0% | |
| TACTGTTTAGGTCGTCATGC+TGG | - | chr1.3:54470639-54470658 | MS.gene85555:intron | 45.0% | |
| TCGAAGTCAGTCAAGAAGCA+AGG | + | chr1.3:54473143-54473162 | None:intergenic | 45.0% | |
| TGAACCTCATCAGCAAATGG+AGG | + | chr1.3:54475179-54475198 | None:intergenic | 45.0% | |
| TGAAGACCCAGAATTGGCTA+TGG | - | chr1.3:54474911-54474930 | MS.gene85555:intron | 45.0% | |
| TGAGGAGTCCAAATTGATCC+TGG | + | chr1.3:54470424-54470443 | None:intergenic | 45.0% | |
| TGAGGTTCAATTAGATGGCC+CGG | - | chr1.3:54475190-54475209 | MS.gene85555:CDS | 45.0% | |
| TGATGCTGAAGACCCAGAAT+TGG | - | chr1.3:54474905-54474924 | MS.gene85555:intron | 45.0% | |
| TGCCGTATATGCTTCTTTGC+AGG | - | chr1.3:54471322-54471341 | MS.gene85555:intron | 45.0% | |
| TGCTATAACGGTGTAGCGTT+GGG | - | chr1.3:54472228-54472247 | MS.gene85555:intron | 45.0% | |
| TGGATAGCCATAGCCAATTC+TGG | + | chr1.3:54474921-54474940 | None:intergenic | 45.0% | |
| TTAGGCAGCTTCTCAACTAC+TGG | + | chr1.3:54475263-54475282 | None:intergenic | 45.0% | |
| TTCAGCATGTTCTTCACGAG+AGG | - | chr1.3:54474949-54474968 | MS.gene85555:intron | 45.0% | |
| TTCGAAACTGAGACCTTGTG+AGG | - | chr1.3:54472819-54472838 | MS.gene85555:intron | 45.0% | |
| TTCGCACAGAAACAGAGCAA+AGG | + | chr1.3:54472587-54472606 | None:intergenic | 45.0% | |
| TTTACGGGCACATATCGTAG+TGG | - | chr1.3:54470594-54470613 | MS.gene85555:intron | 45.0% | |
| ! | ACATGTTGAGTATTGCCACC+TGG | + | chr1.3:54475092-54475111 | None:intergenic | 45.0% |
| ! | AGTGCAGTGCAAGGTTTTCT+TGG | - | chr1.3:54475029-54475048 | MS.gene85555:intron | 45.0% |
| ! | GAAGAGCTTGCTTCAGAGTT+TGG | + | chr1.3:54474996-54475015 | None:intergenic | 45.0% |
| ! | TTCATGAGCAAAGGATTGGC+TGG | + | chr1.3:54470821-54470840 | None:intergenic | 45.0% |
| !! | AAGTTCAGGGAGCATTATGC+AGG | + | chr1.3:54474816-54474835 | None:intergenic | 45.0% |
| !! | AGTTCAGGGAGCATTATGCA+GGG | + | chr1.3:54474815-54474834 | None:intergenic | 45.0% |
| !! | ATTGCTGTTTCCTTTAGCCC+TGG | + | chr1.3:54470873-54470892 | None:intergenic | 45.0% |
| !! | GATGGCGGCTATTGCAATTT+TGG | - | chr1.3:54472375-54472394 | MS.gene85555:intron | 45.0% |
| !! | GCAAGGAAGCATTTCCTGTA+TGG | + | chr1.3:54473126-54473145 | None:intergenic | 45.0% |
| !! | TCTAAATTGGCCTTCCACAG+AGG | + | chr1.3:54471673-54471692 | None:intergenic | 45.0% |
| !! | TGGGTGGTTGTTTTACCAGT+AGG | - | chr1.3:54471263-54471282 | MS.gene85555:intron | 45.0% |
| !! | TTGCTCTGTTTCTGTGCGAA+GGG | - | chr1.3:54472587-54472606 | MS.gene85555:intron | 45.0% |
| !! | TTTGCTCTGTTTCTGTGCGA+AGG | - | chr1.3:54472586-54472605 | MS.gene85555:intron | 45.0% |
| !!! | GGTGGCTGTTTTTTGATCCA+AGG | - | chr1.3:54473775-54473794 | MS.gene85555:intron | 45.0% |
| !! | AAATTAAAAAAGAAAAATTA+GGG | + | chr1.3:54472418-54472437 | None:intergenic | 5.0% |
| AAACTCCTCTTGAGGTTGCC+AGG | - | chr1.3:54470852-54470871 | MS.gene85555:intron | 50.0% | |
| AACGTTGTGTAGGTTCTCCC+AGG | + | chr1.3:54473937-54473956 | None:intergenic | 50.0% | |
| AACTCCTCTTGAGGTTGCCA+GGG | - | chr1.3:54470853-54470872 | MS.gene85555:intron | 50.0% | |
| AAGCTCCAACTTGTAAGGCG+TGG | + | chr1.3:54471303-54471322 | None:intergenic | 50.0% | |
| AATGGAGTGAGTGCAGTGCA+AGG | - | chr1.3:54475020-54475039 | MS.gene85555:intron | 50.0% | |
| ACGGCAAGCTCCAACTTGTA+AGG | + | chr1.3:54471308-54471327 | None:intergenic | 50.0% | |
| ATCCTCCACTACTACGCCAT+AGG | - | chr1.3:54472256-54472275 | MS.gene85555:intron | 50.0% | |
| CAATCTTCTTCGCAGTTGGG+TGG | - | chr1.3:54471247-54471266 | MS.gene85555:intron | 50.0% | |
| CACTGCACTCACTCCATTGA+TGG | + | chr1.3:54475018-54475037 | None:intergenic | 50.0% | |
| CAGACCCAGAGTGAGAATGT+AGG | + | chr1.3:54474197-54474216 | None:intergenic | 50.0% | |
| CATCAAACCGATACGGTAGC+GGG | + | chr1.3:54472359-54472378 | None:intergenic | 50.0% | |
| CCATCAAACCGATACGGTAG+CGG | + | chr1.3:54472360-54472379 | None:intergenic | 50.0% | |
| CTTAGATGCTCCAGCAGAAG+GGG | - | chr1.3:54475331-54475350 | MS.gene85555:intron | 50.0% | |
| GAAGAACTTGGACGAGAGCA+AGG | + | chr1.3:54472532-54472551 | None:intergenic | 50.0% | |
| GAAGAAGGGAAAACTGCTGG+TGG | - | chr1.3:54475284-54475303 | MS.gene85555:intron | 50.0% | |
| GAATCTGTAGCTGTTCCAGG+TGG | - | chr1.3:54475074-54475093 | MS.gene85555:intron | 50.0% | |
| GACCTGCACCTTCTCTATGA+AGG | + | chr1.3:54469795-54469814 | None:intergenic | 50.0% | |
| GCTAGCCCGAAATTTGCACT+AGG | - | chr1.3:54472792-54472811 | MS.gene85555:intron | 50.0% | |
| GCTATAACGGTGTAGCGTTG+GGG | - | chr1.3:54472229-54472248 | MS.gene85555:intron | 50.0% | |
| GCTTAGATGCTCCAGCAGAA+GGG | - | chr1.3:54475330-54475349 | MS.gene85555:intron | 50.0% | |
| GCTTGCTTCAGAGTTTGGCT+GGG | + | chr1.3:54474991-54475010 | None:intergenic | 50.0% | |
| GGGAGGGAATTATATGGCCT+GGG | - | chr1.3:54473917-54473936 | MS.gene85555:intron | 50.0% | |
| GTGCTATAACGGTGTAGCGT+TGG | - | chr1.3:54472227-54472246 | MS.gene85555:intron | 50.0% | |
| GTTGAGGGATTTGGCAGCTT+TGG | + | chr1.3:54473379-54473398 | None:intergenic | 50.0% | |
| TAGCCGCCATCAAACCGATA+CGG | + | chr1.3:54472366-54472385 | None:intergenic | 50.0% | |
| TCAGCAAATGGAGGAGCTGA+TGG | + | chr1.3:54475170-54475189 | None:intergenic | 50.0% | |
| TCTCACCACGCCTTACAAGT+TGG | - | chr1.3:54471295-54471314 | MS.gene85555:intron | 50.0% | |
| TGCTTAGATGCTCCAGCAGA+AGG | - | chr1.3:54475329-54475348 | MS.gene85555:intron | 50.0% | |
| TGGCCATACTACTAGCGATC+TGG | - | chr1.3:54475136-54475155 | MS.gene85555:CDS | 50.0% | |
| TGGGAGGGAATTATATGGCC+TGG | - | chr1.3:54473916-54473935 | MS.gene85555:intron | 50.0% | |
| TGTAAGGCGTGGTGAGAACA+CGG | + | chr1.3:54471292-54471311 | None:intergenic | 50.0% | |
| TTCGTGTTGCGATCGTTCCT+TGG | - | chr1.3:54472484-54472503 | MS.gene85555:intron | 50.0% | |
| ! | AGCTCCTCCATTTGCTGATG+AGG | - | chr1.3:54475172-54475191 | MS.gene85555:CDS | 50.0% |
| ! | AGCTTGCTTCAGAGTTTGGC+TGG | + | chr1.3:54474992-54475011 | None:intergenic | 50.0% |
| ! | TAGAGAAGGTGCAGGTCTTG+AGG | - | chr1.3:54469798-54469817 | MS.gene85555:CDS | 50.0% |
| !! | AATCGGTCTCCCGGATTAGT+CGG | + | chr1.3:54472750-54472769 | None:intergenic | 50.0% |
| !! | CTACCGTATCGGTTTGATGG+CGG | - | chr1.3:54472360-54472379 | MS.gene85555:intron | 50.0% |
| !! | TGGTGTAGTCTTTGGGACCT+TGG | + | chr1.3:54472853-54472872 | None:intergenic | 50.0% |
| AATGGTGCTTCACGGGCCTA+TGG | + | chr1.3:54472275-54472294 | None:intergenic | 55.0% | |
| AATGTCAATGCGTACCGCCC+TGG | - | chr1.3:54470058-54470077 | MS.gene85555:CDS | 55.0% | |
| ATACCACAGATGTCAGGGGG+TGG | - | chr1.3:54473896-54473915 | MS.gene85555:CDS | 55.0% | |
| ATACCCTGTGGCCATGTTGC+TGG | - | chr1.3:54475359-54475378 | MS.gene85555:intron | 55.0% | |
| CATCCAGCAACATGGCCACA+GGG | + | chr1.3:54475365-54475384 | None:intergenic | 55.0% | |
| CGATTCCACTGTCCACCAGA+GGG | - | chr1.3:54472765-54472784 | MS.gene85555:intron | 55.0% | |
| CTTGAGGTTGCCAGGGCTAA+AGG | - | chr1.3:54470860-54470879 | MS.gene85555:intron | 55.0% | |
| CTTGGAGTGTGCACCTCACA+AGG | + | chr1.3:54472835-54472854 | None:intergenic | 55.0% | |
| CTTGTGAGGTGCACACTCCA+AGG | - | chr1.3:54472833-54472852 | MS.gene85555:intron | 55.0% | |
| GATTCCACTGTCCACCAGAG+GGG | - | chr1.3:54472766-54472785 | MS.gene85555:intron | 55.0% | |
| GCACAATCCCGCTACCGTAT+CGG | - | chr1.3:54472349-54472368 | MS.gene85555:intron | 55.0% | |
| GGACGAGAGCAAGGCAACAA+TGG | + | chr1.3:54472523-54472542 | None:intergenic | 55.0% | |
| GGATCCGACTGACGAAGCTT+TGG | + | chr1.3:54471700-54471719 | None:intergenic | 55.0% | |
| GGGAAAACTGCTGGTGGAAG+TGG | - | chr1.3:54475290-54475309 | MS.gene85555:intron | 55.0% | |
| GGGGGTGGGAGGGAATTATA+TGG | - | chr1.3:54473911-54473930 | MS.gene85555:CDS | 55.0% | |
| GGTCCAAGGACCGACTAATC+CGG | - | chr1.3:54472737-54472756 | MS.gene85555:intron | 55.0% | |
| GTAAGGCGTGGTGAGAACAC+GGG | + | chr1.3:54471291-54471310 | None:intergenic | 55.0% | |
| GTCCAAGGACCGACTAATCC+GGG | - | chr1.3:54472738-54472757 | MS.gene85555:intron | 55.0% | |
| GTCCCAAAGACTACACCACC+AGG | - | chr1.3:54472855-54472874 | MS.gene85555:intron | 55.0% | |
| GTTGAAAAGCGGCACCATCG+CGG | - | chr1.3:54472327-54472346 | MS.gene85555:intron | 55.0% | |
| TACCACAGATGTCAGGGGGT+GGG | - | chr1.3:54473897-54473916 | MS.gene85555:CDS | 55.0% | |
| TCAGAGTTTGGCTGGGCATC+AGG | + | chr1.3:54474984-54475003 | None:intergenic | 55.0% | |
| TCTGGGTCTTCAGCATCAGG+TGG | + | chr1.3:54474903-54474922 | None:intergenic | 55.0% | |
| TGCCTGTCGTTCTCACTTGC+AGG | + | chr1.3:54473216-54473235 | None:intergenic | 55.0% | |
| TGCTTGCAAAGGAATGCCGC+AGG | - | chr1.3:54473257-54473276 | MS.gene85555:intron | 55.0% | |
| TTAGCCCTGGCAACCTCAAG+AGG | + | chr1.3:54470860-54470879 | None:intergenic | 55.0% | |
| ! | AGGGCGGTACGCATTGACAT+TGG | + | chr1.3:54470059-54470078 | None:intergenic | 55.0% |
| ! | CCTCTGGTGGACAGTGGAAT+CGG | + | chr1.3:54472767-54472786 | None:intergenic | 55.0% |
| ! | CTTGTTCTCTGGTTGGCTGC+GGG | - | chr1.3:54471058-54471077 | MS.gene85555:intron | 55.0% |
| ! | GCCCTTCATAGAGAAGGTGC+AGG | - | chr1.3:54469790-54469809 | MS.gene85555:CDS | 55.0% |
| ! | GCTTGTTCTCTGGTTGGCTG+CGG | - | chr1.3:54471057-54471076 | MS.gene85555:intron | 55.0% |
| ! | GGCCTGGTGGTGTAGTCTTT+GGG | + | chr1.3:54472860-54472879 | None:intergenic | 55.0% |
| ! | TGGCCTGGTGGTGTAGTCTT+TGG | + | chr1.3:54472861-54472880 | None:intergenic | 55.0% |
| !! | CCGCTACCGTATCGGTTTGA+TGG | - | chr1.3:54472357-54472376 | MS.gene85555:intron | 55.0% |
| !! | GGTGCTGTTGGTGGAACTGT+AGG | + | chr1.3:54474882-54474901 | None:intergenic | 55.0% |
| !! | TCAGCATCAGGTGGTGCTGT+TGG | + | chr1.3:54474894-54474913 | None:intergenic | 55.0% |
| ACAGATGTCAGGGGGTGGGA+GGG | - | chr1.3:54473901-54473920 | MS.gene85555:CDS | 60.0% | |
| ACCACCAGGCCAACCCATGT+GGG | - | chr1.3:54472869-54472888 | MS.gene85555:intron | 60.0% | |
| ACGGGCCTATGGCGTAGTAG+TGG | + | chr1.3:54472264-54472283 | None:intergenic | 60.0% | |
| CCGATTCCACTGTCCACCAG+AGG | - | chr1.3:54472764-54472783 | MS.gene85555:intron | 60.0% | |
| CTGCGGGAGTTTCATGGACC+TGG | - | chr1.3:54471074-54471093 | MS.gene85555:intron | 60.0% | |
| GCATCCAGCAACATGGCCAC+AGG | + | chr1.3:54475366-54475385 | None:intergenic | 60.0% | |
| GGACAGTGGAATCGGTCTCC+CGG | + | chr1.3:54472759-54472778 | None:intergenic | 60.0% | |
| GGCCTATGGCGTAGTAGTGG+AGG | + | chr1.3:54472261-54472280 | None:intergenic | 60.0% | |
| GGCCTGCAAGTGAGAACGAC+AGG | - | chr1.3:54473211-54473230 | MS.gene85555:intron | 60.0% | |
| GGCTGGGCATCAGGAAAGCT+TGG | + | chr1.3:54474975-54474994 | None:intergenic | 60.0% | |
| GGTATGCATGCCCCTTCTGC+TGG | + | chr1.3:54475344-54475363 | None:intergenic | 60.0% | |
| GTGAGAACACGGGAGCCTAC+TGG | + | chr1.3:54471281-54471300 | None:intergenic | 60.0% | |
| TCGTCAGTCGGATCCGTCAG+TGG | - | chr1.3:54471705-54471724 | MS.gene85555:intron | 60.0% | |
| ! | GAAGGGGCATGCATACCCTG+TGG | - | chr1.3:54475347-54475366 | MS.gene85555:intron | 60.0% |
| ! | GGTTGGCTGCGGGAGTTTCA+TGG | - | chr1.3:54471068-54471087 | MS.gene85555:intron | 60.0% |
| !! | ACAACCCACATGGGTTGGCC+TGG | + | chr1.3:54472876-54472895 | None:intergenic | 60.0% |
| !! | CTCCCGGATTAGTCGGTCCT+TGG | + | chr1.3:54472743-54472762 | None:intergenic | 60.0% |
| !! | GCATCAGGTGGTGCTGTTGG+TGG | + | chr1.3:54474891-54474910 | None:intergenic | 60.0% |
| CACAGATGTCAGGGGGTGGG+AGG | - | chr1.3:54473900-54473919 | MS.gene85555:CDS | 65.0% | |
| CACCACCAGGCCAACCCATG+TGG | - | chr1.3:54472868-54472887 | MS.gene85555:intron | 65.0% | |
| CCACTGTCCACCAGAGGGGT+GGG | - | chr1.3:54472770-54472789 | MS.gene85555:intron | 65.0% | |
| CTCCCACCCCCTGACATCTG+TGG | + | chr1.3:54473902-54473921 | None:intergenic | 65.0% | |
| TCCACTGTCCACCAGAGGGG+TGG | - | chr1.3:54472769-54472788 | MS.gene85555:intron | 65.0% | |
| ! | GTAGCGGGATTGTGCCGCGA+TGG | + | chr1.3:54472344-54472363 | None:intergenic | 65.0% |
| !! | ACCCACATGGGTTGGCCTGG+TGG | + | chr1.3:54472873-54472892 | None:intergenic | 65.0% |
| ! | CCCACCCCTCTGGTGGACAG+TGG | + | chr1.3:54472773-54472792 | None:intergenic | 70.0% |
| !! | TTCGGGCTAGCCCACCCCTC+TGG | + | chr1.3:54472783-54472802 | None:intergenic | 70.0% |
| !! | GGGCTAGCCCACCCCTCTGG+TGG | + | chr1.3:54472780-54472799 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 54469718 | 54475478 | 54469718 | ID=MS.gene85555 |
| chr1.3 | mRNA | 54469718 | 54475478 | 54469718 | ID=MS.gene85555.t1;Parent=MS.gene85555 |
| chr1.3 | exon | 54475377 | 54475478 | 54475377 | ID=MS.gene85555.t1.exon1;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54475377 | 54475478 | 54475377 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54475117 | 54475231 | 54475117 | ID=MS.gene85555.t1.exon2;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54475117 | 54475231 | 54475117 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54474467 | 54474547 | 54474467 | ID=MS.gene85555.t1.exon3;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54474467 | 54474547 | 54474467 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54474286 | 54474374 | 54474286 | ID=MS.gene85555.t1.exon4;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54474286 | 54474374 | 54474286 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54474058 | 54474149 | 54474058 | ID=MS.gene85555.t1.exon5;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54474058 | 54474149 | 54474058 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54473853 | 54473934 | 54473853 | ID=MS.gene85555.t1.exon6;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54473853 | 54473934 | 54473853 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54473448 | 54473550 | 54473448 | ID=MS.gene85555.t1.exon7;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54473448 | 54473550 | 54473448 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54471918 | 54472003 | 54471918 | ID=MS.gene85555.t1.exon8;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54471918 | 54472003 | 54471918 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| chr1.3 | exon | 54469718 | 54470347 | 54469718 | ID=MS.gene85555.t1.exon9;Parent=MS.gene85555.t1 |
| chr1.3 | CDS | 54469718 | 54470347 | 54469718 | ID=cds.MS.gene85555.t1;Parent=MS.gene85555.t1 |
| Gene Sequence |
| Protein sequence |
