AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99555

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99555.t1 MTR_8g073250 98.876 445 2 1 1 445 1 442 0.0 910
MS.gene99555.t1 MTR_5g024270 82.287 446 78 1 1 445 1 446 0.0 746
MS.gene99555.t1 MTR_5g024270 84.548 343 52 1 1 342 1 343 0.0 586
MS.gene99555.t1 MTR_1g061690 48.456 518 189 6 2 441 8 525 2.46e-173 497
MS.gene99555.t1 MTR_4g056390 48.155 515 181 7 12 441 13 526 4.96e-167 481
MS.gene99555.t1 MTR_2g084555 46.014 276 126 3 183 441 253 522 2.40e-80 258
MS.gene99555.t1 MTR_2g084555 56.019 216 82 1 6 208 8 223 4.15e-79 255
MS.gene99555.t1 MTR_3g109390 29.426 418 218 13 5 413 27 376 6.08e-42 153
MS.gene99555.t1 MTR_3g109390 29.665 418 217 14 5 413 49 398 7.48e-40 147
MS.gene99555.t1 MTR_3g109390 29.904 418 214 15 5 413 49 396 1.75e-39 146
MS.gene99555.t1 MTR_3g076540 29.369 412 204 13 21 414 78 420 3.01e-39 146
MS.gene99555.t1 MTR_3g109390 30.053 376 194 11 47 413 70 385 1.35e-38 144
MS.gene99555.t1 MTR_3g076540 29.455 404 198 13 29 414 4 338 1.97e-38 142
MS.gene99555.t1 MTR_3g109390 30.053 376 194 11 47 413 92 407 3.49e-38 143
MS.gene99555.t1 MTR_4g104620 29.440 411 209 13 21 416 82 426 1.17e-37 142
MS.gene99555.t1 MTR_3g076540 29.306 389 189 12 44 414 1 321 1.70e-36 137
MS.gene99555.t1 MTR_3g076540 28.810 420 204 14 21 414 78 428 1.87e-36 139
MS.gene99555.t1 MTR_3g109390 30.199 351 177 11 5 355 49 331 9.21e-36 135
MS.gene99555.t1 MTR_4g104620 29.592 392 190 13 43 416 9 332 1.32e-35 134
MS.gene99555.t1 MTR_4g104620 29.412 391 190 13 44 416 1 323 5.24e-35 132
MS.gene99555.t1 MTR_3g086530 28.530 347 185 9 21 367 77 360 2.05e-33 129
MS.gene99555.t1 MTR_3g086530 28.530 347 185 9 21 367 77 360 4.45e-33 129
MS.gene99555.t1 MTR_3g086530 28.947 304 154 8 64 367 2 243 8.04e-29 115
MS.gene99555.t1 MTR_3g086530 29.021 286 153 7 21 306 77 312 4.42e-27 110
MS.gene99555.t1 MTR_3g086530 28.689 244 117 6 124 367 2 188 6.43e-21 92.0
MS.gene99555.t1 MTR_6g074905 32.143 168 100 5 252 413 1005 1164 4.85e-19 90.5
MS.gene99555.t1 MTR_0349s0030 32.143 168 100 5 252 413 125 284 1.99e-18 85.9
MS.gene99555.t1 MTR_5g082700 31.098 164 101 4 254 413 550 705 3.48e-18 87.8
MS.gene99555.t1 MTR_5g082700 32.258 155 96 3 29 179 394 543 2.34e-12 69.3
MS.gene99555.t1 MTR_8g070930 33.103 145 91 3 37 180 138 277 1.03e-17 86.3
MS.gene99555.t1 MTR_8g070930 39.815 108 58 3 254 360 285 386 1.26e-13 73.6
MS.gene99555.t1 MTR_1g111180 32.609 184 91 8 254 416 822 993 2.03e-13 73.2
MS.gene99555.t1 MTR_1g111180 30.233 172 101 5 11 177 657 814 2.50e-11 66.6
MS.gene99555.t1 MTR_1g111180 32.609 184 91 8 254 416 823 994 2.03e-13 73.2
MS.gene99555.t1 MTR_1g111180 30.233 172 101 5 11 177 658 815 2.48e-11 66.6
MS.gene99555.t1 MTR_5g082700 32.886 149 91 3 35 179 400 543 2.45e-12 69.3
MS.gene99555.t1 MTR_5g082700 32.886 149 91 3 35 179 400 543 2.47e-12 69.3
MS.gene99555.t1 MTR_6g074750 45.000 60 31 1 252 309 54 113 1.15e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99555.t1 AT4G35500 73.034 445 109 3 1 442 1 437 0.0 666
MS.gene99555.t1 AT2G17530 73.198 444 109 3 1 442 1 436 0.0 653
MS.gene99555.t1 AT2G17530 73.198 444 109 3 1 442 1 436 0.0 653
MS.gene99555.t1 AT4G35500 70.852 446 118 4 1 442 1 438 0.0 643
MS.gene99555.t1 AT2G17530 78.363 342 72 2 1 340 1 342 0.0 525
MS.gene99555.t1 AT3G53030 50.420 476 178 6 12 431 16 489 8.10e-168 482
MS.gene99555.t1 AT5G22840 49.476 477 184 4 4 428 11 482 1.14e-164 474
MS.gene99555.t1 AT3G44850 47.276 514 191 6 12 445 19 532 1.70e-162 469
MS.gene99555.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene99555.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene99555.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene99555.t1 AT4G32660 28.288 403 218 10 21 413 47 388 4.78e-39 145
MS.gene99555.t1 AT3G53570 29.676 401 218 10 21 413 85 429 5.30e-39 146
MS.gene99555.t1 AT3G53570 29.676 401 218 10 21 413 85 429 5.30e-39 146
MS.gene99555.t1 AT4G32660 28.288 403 218 10 21 413 55 396 6.83e-39 145
MS.gene99555.t1 AT4G24740 29.710 414 204 14 21 416 44 388 1.49e-38 144
MS.gene99555.t1 AT4G24740 29.227 414 206 13 21 416 82 426 4.75e-38 143
MS.gene99555.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene99555.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene99555.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene99555.t1 AT4G32660 28.657 335 180 8 21 355 55 330 3.97e-35 134
MS.gene99555.t1 AT4G24740 30.625 320 164 8 21 340 82 343 5.63e-34 130
MS.gene99555.t1 AT4G24740 31.313 297 147 8 44 340 1 240 7.27e-32 122
MS.gene99555.t1 AT4G32660 28.280 343 174 11 82 413 3 284 5.58e-30 118
MS.gene99555.t1 AT4G24740 30.420 286 147 7 21 306 82 315 6.65e-28 113
MS.gene99555.t1 AT1G73460 34.524 168 96 5 252 413 1001 1160 1.20e-21 98.6
MS.gene99555.t1 AT1G73460 34.524 168 96 5 252 413 1001 1160 1.20e-21 98.6
MS.gene99555.t1 AT1G73450 34.524 168 96 5 252 413 984 1143 1.34e-21 98.6
MS.gene99555.t1 AT2G40120 24.561 399 210 12 29 418 252 568 8.96e-21 95.5
MS.gene99555.t1 AT4G24740 29.630 270 110 10 165 416 13 220 3.00e-20 89.4
MS.gene99555.t1 AT4G24740 29.630 270 110 10 165 416 13 220 3.00e-20 89.4
MS.gene99555.t1 AT5G35980 31.111 180 110 6 12 185 94 265 6.90e-19 90.1
MS.gene99555.t1 AT5G35980 30.918 207 87 7 254 413 267 464 1.39e-14 76.6
MS.gene99555.t1 AT5G35980 32.667 150 95 3 37 185 121 265 1.05e-18 89.7
MS.gene99555.t1 AT5G35980 43.878 98 49 2 254 351 267 358 1.34e-14 76.6
MS.gene99555.t1 AT5G35980 31.111 180 110 6 12 185 59 230 1.14e-18 89.4
MS.gene99555.t1 AT5G35980 43.878 98 49 2 254 351 232 323 1.42e-14 76.6
MS.gene99555.t1 AT3G17750 32.143 168 100 5 252 413 970 1129 1.40e-17 86.3
MS.gene99555.t1 AT3G53640 31.148 183 96 6 254 416 470 642 2.14e-14 75.9
MS.gene99555.t1 AT1G13350 30.435 184 96 7 254 416 589 761 2.90e-13 72.4
MS.gene99555.t1 AT1G13350 30.814 172 100 5 11 177 424 581 6.90e-12 68.2
MS.gene99555.t1 AT1G13350 30.435 184 96 7 254 416 616 788 3.35e-13 72.4
MS.gene99555.t1 AT1G13350 30.814 172 100 5 11 177 451 608 7.53e-12 68.2
MS.gene99555.t1 AT1G13350 30.435 184 96 7 254 416 662 834 3.62e-13 72.4
MS.gene99555.t1 AT1G13350 30.814 172 100 5 11 177 497 654 8.88e-12 67.8
MS.gene99555.t1 AT3G25840 31.694 183 94 7 254 416 502 673 6.96e-13 71.2
MS.gene99555.t1 AT3G25840 31.720 186 90 9 254 416 764 935 8.61e-13 71.2

Find 125 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATATTTCTATCAGAATT+TGG 0.182704 8.3:+29310850 None:intergenic
ATGTCTTGTTCTTCTTCATC+TGG 0.217080 8.3:-29312463 MS.gene99555:CDS
GGATTCGGAGGCTAAAATTT+TGG 0.237408 8.3:-29309493 MS.gene99555:CDS
TTCTGGACAACGAGCTTCTA+TGG 0.254870 8.3:-29310890 MS.gene99555:CDS
TTCTGCAGTTGGTCGCTTCT+CGG 0.258297 8.3:+29309376 None:intergenic
AGGGCGGTAGCTAAAATTTC+TGG 0.265940 8.3:-29310907 MS.gene99555:CDS
CCATGAGCCAAGGGTGTTGC+AGG 0.266108 8.3:+29309348 None:intergenic
AGATGCAAAGTGGTTGATTT+TGG 0.275568 8.3:-29310814 MS.gene99555:CDS
ATACATAGCTCAGAGGAAAT+TGG 0.318879 8.3:-29312353 MS.gene99555:CDS
CAGCATGGTATCCACCTTTC+CGG 0.321046 8.3:+29312407 None:intergenic
AAAACTTGAAAATGTTCTTC+TGG 0.321760 8.3:-29311058 MS.gene99555:CDS
CCCTCAGGCCTCTCTAAAAT+CGG 0.323007 8.3:+29310988 None:intergenic
GCTAAAACCTTGTCCGACTT+TGG 0.352838 8.3:+29310630 None:intergenic
GTCTGAATTTCTTCCGCAAA+TGG 0.355796 8.3:+29310769 None:intergenic
CTAAAACCTTGTCCGACTTT+GGG 0.366642 8.3:+29310631 None:intergenic
TTCCAAGGAGTTCCATCATC+AGG 0.368239 8.3:+29309785 None:intergenic
GGGGAGACTCCCGATCTAAC+AGG 0.374226 8.3:+29311009 None:intergenic
TCAATCAATAGTTTGTTAAG+AGG 0.383534 8.3:+29309470 None:intergenic
AGCTCAGAGGAAATTGGGTT+GGG 0.387320 8.3:-29312347 MS.gene99555:CDS
CGGTGGGAACACTACCTTCC+GGG 0.395671 8.3:+29309756 None:intergenic
TGCATGGTACTCGAATTTCT+TGG 0.404519 8.3:-29311216 MS.gene99555:CDS
ATTGCTTTCGAGCTTGCCAC+TGG 0.409835 8.3:-29310670 MS.gene99555:CDS
AAGTGCAGCACAGTTTGTTC+AGG 0.411479 8.3:-29311358 MS.gene99555:CDS
TGTCTTGTTCTTCTTCATCT+GGG 0.422803 8.3:-29312462 MS.gene99555:CDS
GCTTAAAGTGGTCGATCAAT+TGG 0.423698 8.3:+29311265 None:intergenic
ATCTCCCTGACTTTATTCAT+TGG 0.424557 8.3:+29311147 None:intergenic
ATGCATTGGTGCTGGCCGTT+AGG 0.428045 8.3:+29311234 None:intergenic
GATTCATTTCTCATTTCATC+AGG 0.430586 8.3:+29309311 None:intergenic
TACATAGCTCAGAGGAAATT+GGG 0.433819 8.3:-29312352 MS.gene99555:CDS
TCTGCAGTTGGTCGCTTCTC+GGG 0.434856 8.3:+29309377 None:intergenic
ACACCCTTGGCTCATGGAAA+AGG 0.460564 8.3:-29309342 MS.gene99555:CDS
CCTCAGGCCTCTCTAAAATC+GGG 0.463410 8.3:+29310989 None:intergenic
CGAGCTTCTATGGGAGGAAT+GGG 0.464270 8.3:-29310880 MS.gene99555:CDS
AAGGTGGATACCATGCTGTC+CGG 0.465806 8.3:-29312402 MS.gene99555:CDS
GTCTTCCAATGAATAAAGTC+AGG 0.471907 8.3:-29311152 MS.gene99555:CDS
AATTCTGATAGAAATATTGA+TGG 0.472298 8.3:-29310847 MS.gene99555:CDS
AAAAGTTGAAAAGGAGAGCA+AGG 0.476403 8.3:-29310930 MS.gene99555:CDS
ATTCCTTCTCCGTGGATATG+TGG 0.481735 8.3:-29310705 MS.gene99555:CDS
TGGTTTGGATTACTTGCATA+GGG 0.485784 8.3:-29311106 MS.gene99555:CDS
CCTGCAACACCCTTGGCTCA+TGG 0.486242 8.3:-29309348 MS.gene99555:CDS
ACGGGGATCTCAAAAGGATT+CGG 0.490967 8.3:-29309508 MS.gene99555:CDS
AACTCCTTGGAAAGATGCCC+CGG 0.491317 8.3:-29309774 MS.gene99555:CDS
CCAGCCTGCAGTATAACTTC+AGG 0.494640 8.3:+29310730 None:intergenic
ATGTTACAGGTTGCTACTGC+AGG 0.497187 8.3:-29309560 MS.gene99555:intron
ACAGACACGGGGATCTCAAA+AGG 0.497743 8.3:-29309514 MS.gene99555:CDS
GGCGAAAGACCCTGTTAGAT+CGG 0.498073 8.3:-29311019 MS.gene99555:CDS
AACAGTGCCTGCAACACCCT+TGG 0.502041 8.3:-29309355 MS.gene99555:CDS
ACGAGCTTCTATGGGAGGAA+TGG 0.502048 8.3:-29310881 MS.gene99555:CDS
TCTGGTTTCTACTATCGATC+CGG 0.502093 8.3:-29311040 MS.gene99555:CDS
AATAAGCAACCTTAAAATCA+AGG 0.503806 8.3:-29309264 MS.gene99555:CDS
TGCAGGCACTGTTCTGCAGT+TGG 0.504517 8.3:+29309365 None:intergenic
AGGCCTGAGGGAAACATAAA+CGG 0.506847 8.3:-29310976 MS.gene99555:CDS
GCGCCGTTTATGTTTCCCTC+AGG 0.507071 8.3:+29310973 None:intergenic
CGAGTACCATGCATTGGTGC+TGG 0.511219 8.3:+29311226 None:intergenic
GCGAAAGACCCTGTTAGATC+GGG 0.514836 8.3:-29311018 MS.gene99555:CDS
AGCTCCTGAAGTTATACTGC+AGG 0.520770 8.3:-29310734 MS.gene99555:CDS
GTTCTTTCATCCATTGCTGA+TGG 0.521395 8.3:-29311315 MS.gene99555:CDS
AAATCAAGGTGGGGAAGTGA+AGG 0.521806 8.3:-29309250 None:intergenic
AGGTGGATACCATGCTGTCC+GGG 0.530748 8.3:-29312401 MS.gene99555:CDS
TCTGGACAACGAGCTTCTAT+GGG 0.531056 8.3:-29310889 MS.gene99555:CDS
TTGCTTTCGAGCTTGCCACT+GGG 0.531169 8.3:-29310669 MS.gene99555:CDS
ATGAAGGCTTTGATTCCTAC+CGG 0.531226 8.3:-29312426 MS.gene99555:CDS
GGATCACCTTGCCCTGATGA+TGG 0.535748 8.3:-29309797 MS.gene99555:CDS
AGCAACCTTAAAATCAAGGT+GGG 0.536200 8.3:-29309260 MS.gene99555:CDS
AGGATTTCTTCGACAGACAC+GGG 0.536846 8.3:-29309526 MS.gene99555:CDS
TTGGGCTGATAAGCCATTTG+CGG 0.537617 8.3:-29310782 MS.gene99555:CDS
TAGCTCAGAGGAAATTGGGT+TGG 0.539063 8.3:-29312348 MS.gene99555:CDS
TTGGTTTGGATTACTTGCAT+AGG 0.539558 8.3:-29311107 MS.gene99555:CDS
CTGAGCTATGTATCTTCCAC+CGG 0.543544 8.3:+29312363 None:intergenic
ATGTTATTTACTCCCAAAGT+CGG 0.550928 8.3:-29310643 MS.gene99555:CDS
GATTACTTGCATAGGGAACA+TGG 0.550939 8.3:-29311099 MS.gene99555:CDS
CCTTCCGGGGCATCTTTCCA+AGG 0.553985 8.3:+29309770 None:intergenic
GTCGGTGATCAGTTCGCCGG+TGG 0.559099 8.3:-29312379 MS.gene99555:CDS
TGAAGGGGCGCCATCAGCAA+TGG 0.565495 8.3:+29311305 None:intergenic
GTTGAAAAGGAGAGCAAGGA+GGG 0.566829 8.3:-29310926 MS.gene99555:CDS
CGGCGAACTGATCACCGACC+CGG 0.567799 8.3:+29312383 None:intergenic
AAGGATTTCTTCGACAGACA+CGG 0.569862 8.3:-29309527 MS.gene99555:CDS
GGCTTTGATTCCTACCGGAA+AGG 0.573918 8.3:-29312421 MS.gene99555:CDS
GGATTGAGAACATACATCGT+TGG 0.574635 8.3:+29312288 None:intergenic
GTGTCTGTCGAAGAAATCCT+TGG 0.579045 8.3:+29309529 None:intergenic
GAAATTCGAGTACCATGCAT+TGG 0.579276 8.3:+29311220 None:intergenic
ATTCTGATAGAAATATTGAT+GGG 0.582335 8.3:-29310846 MS.gene99555:CDS
GATCTAACAGGGTCTTTCGC+CGG 0.591268 8.3:+29311021 None:intergenic
TTTACTCCCAAAGTCGGACA+AGG 0.591377 8.3:-29310637 MS.gene99555:CDS
AGACCACATATCCACGGAGA+AGG 0.591634 8.3:+29310702 None:intergenic
TCCAAGGAGTTCCATCATCA+GGG 0.591920 8.3:+29309786 None:intergenic
CGGGTCGGTGATCAGTTCGC+CGG 0.595542 8.3:-29312382 MS.gene99555:CDS
TAGGACCTGTGTGCTTAAAG+TGG 0.596811 8.3:+29311253 None:intergenic
TCATTGGAAGACCTTTGTAA+CGG 0.603104 8.3:+29311163 None:intergenic
GGGTCTGAAGATGATGATGA+AGG 0.603847 8.3:-29312442 MS.gene99555:CDS
GGATACCATGCTGTCCGGGT+CGG 0.605762 8.3:-29312397 MS.gene99555:CDS
TTTAAGCACACAGGTCCTAA+CGG 0.605824 8.3:-29311249 MS.gene99555:CDS
AGTATCAAAAGCAAGCCAAA+CGG 0.608489 8.3:+29312312 None:intergenic
ATGGTATCCACCTTTCCGGT+AGG 0.608525 8.3:+29312411 None:intergenic
AATGAGAAATGAATCTAGTG+TGG 0.608814 8.3:-29309303 MS.gene99555:CDS
GCCCTGATGATGGAACTCCT+TGG 0.613944 8.3:-29309787 MS.gene99555:CDS
GCTCAGAGGAAATTGGGTTG+GGG 0.614301 8.3:-29312346 MS.gene99555:CDS
GGCTGGTTATTCCTTCTCCG+TGG 0.615793 8.3:-29310713 MS.gene99555:CDS
TTTGATTCCTACCGGAAAGG+TGG 0.616024 8.3:-29312418 MS.gene99555:CDS
CCTGAAGTTATACTGCAGGC+TGG 0.616462 8.3:-29310730 MS.gene99555:CDS
GTCAGATACAACCGTTACAA+AGG 0.617545 8.3:-29311174 MS.gene99555:CDS
TGCTTTCGAGCTTGCCACTG+GGG 0.622478 8.3:-29310668 MS.gene99555:CDS
GATCACCGACCCGGACAGCA+TGG 0.622696 8.3:+29312392 None:intergenic
TCTTCCAATGAATAAAGTCA+GGG 0.627236 8.3:-29311151 MS.gene99555:CDS
GGGAGACTCCCGATCTAACA+GGG 0.627241 8.3:+29311010 None:intergenic
TAACGGCCAGCACCAATGCA+TGG 0.636403 8.3:-29311232 MS.gene99555:CDS
GGAGTTCCATCATCAGGGCA+AGG 0.636676 8.3:+29309791 None:intergenic
CTCAGGCCTCTCTAAAATCG+GGG 0.638151 8.3:+29310990 None:intergenic
TCGGGTGCAAAATCAAGAAG+AGG 0.638735 8.3:+29309395 None:intergenic
ATCGACCACTTTAAGCACAC+AGG 0.642901 8.3:-29311258 MS.gene99555:CDS
GCAACCTTAAAATCAAGGTG+GGG 0.643577 8.3:-29309259 MS.gene99555:CDS
AGCAAAAGACCACATATCCA+CGG 0.644246 8.3:+29310696 None:intergenic
GGTGGGAACACTACCTTCCG+GGG 0.647201 8.3:+29309757 None:intergenic
CCTTGGAAAGATGCCCCGGA+AGG 0.648843 8.3:-29309770 MS.gene99555:intron
AAGCAACCTTAAAATCAAGG+TGG 0.649106 8.3:-29309261 MS.gene99555:CDS
GGGATCTCAAAAGGATTCGG+AGG 0.658136 8.3:-29309505 MS.gene99555:CDS
GGACAACGAGCTTCTATGGG+AGG 0.663981 8.3:-29310886 MS.gene99555:CDS
GGATTTCTTCGACAGACACG+GGG 0.676658 8.3:-29309525 MS.gene99555:CDS
GAAAAGGAGAGCAAGGAGGG+CGG 0.678748 8.3:-29310923 MS.gene99555:CDS
GATTGATGTTAGATGCAAAG+TGG 0.684911 8.3:-29310824 MS.gene99555:CDS
AGTTGAAAAGGAGAGCAAGG+AGG 0.686372 8.3:-29310927 MS.gene99555:CDS
TACTGCAGGAGTGAAATCCA+AGG 0.690749 8.3:-29309546 MS.gene99555:CDS
AGTAAATAACATATCCCCAG+TGG 0.717830 8.3:+29310654 None:intergenic
GTGGAAGATACATAGCTCAG+AGG 0.718302 8.3:-29312360 MS.gene99555:CDS
TGAGGGAAACATAAACGGCG+CGG 0.758453 8.3:-29310971 MS.gene99555:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTACAATAATACAAAAA+GGG + chr8.3:29309479-29309498 None:intergenic 15.0%
!!! TATAAATAGGTTAATTTTGT+TGG - chr8.3:29310150-29310169 MS.gene99555:intron 15.0%
!!! TTTTTGTTTATAATAGTGAT+TGG - chr8.3:29309651-29309670 MS.gene99555:intron 15.0%
!! AATTCTGATAGAAATATTGA+TGG - chr8.3:29310869-29310888 MS.gene99555:CDS 20.0%
!! ATTCTGATAGAAATATTGAT+GGG - chr8.3:29310870-29310889 MS.gene99555:CDS 20.0%
!! CAAAACAAATCTTTATCTTT+AGG + chr8.3:29309452-29309471 None:intergenic 20.0%
!! CAGATTACAATAATACAAAA+AGG + chr8.3:29309480-29309499 None:intergenic 20.0%
!! CTATTATATCATGTATAGTT+AGG + chr8.3:29311459-29311478 None:intergenic 20.0%
!! GATATTTGACAAGAAATAAA+AGG + chr8.3:29310284-29310303 None:intergenic 20.0%
!! TATTCAATGAACCTAAAAAA+TGG + chr8.3:29309555-29309574 None:intergenic 20.0%
!! TTATTGAGAAAAAGTTGAAA+AGG - chr8.3:29310777-29310796 MS.gene99555:CDS 20.0%
!!! AACAAATTTTGAATTTGAAG+GGG + chr8.3:29310429-29310448 None:intergenic 20.0%
!!! ACAACAAATTTTGAATTTGA+AGG + chr8.3:29310431-29310450 None:intergenic 20.0%
!!! ATTATAGGTTGATAATGATT+GGG - chr8.3:29310059-29310078 MS.gene99555:intron 20.0%
!!! CAACAAATTTTGAATTTGAA+GGG + chr8.3:29310430-29310449 None:intergenic 20.0%
!!! CATTTTCAAATCGATAAATA+CGG + chr8.3:29309890-29309909 None:intergenic 20.0%
!!! TAATAGTTGTTACTTTATTG+AGG - chr8.3:29311594-29311613 MS.gene99555:intron 20.0%
!!! TATAGTTTTGAATCTTTGAT+TGG - chr8.3:29311771-29311790 MS.gene99555:intron 20.0%
!!! TATTATAGGTTGATAATGAT+TGG - chr8.3:29310058-29310077 MS.gene99555:intron 20.0%
!!! TATTGAATAAACAGTCATTT+TGG - chr8.3:29311157-29311176 MS.gene99555:CDS 20.0%
!!! TCAATATTTCTATCAGAATT+TGG + chr8.3:29310869-29310888 None:intergenic 20.0%
! AAAACTTGAAAATGTTCTTC+TGG - chr8.3:29310658-29310677 MS.gene99555:CDS 25.0%
! AACAAAAGATGCAAAACTAT+AGG + chr8.3:29309835-29309854 None:intergenic 25.0%
! AATAAGCAACCTTAAAATCA+AGG - chr8.3:29312452-29312471 MS.gene99555:CDS 25.0%
! ATAGCTAAATGTTAAGACTT+TGG - chr8.3:29310234-29310253 MS.gene99555:intron 25.0%
! ATCTTCTGTTAGTAATTTGA+TGG + chr8.3:29311269-29311288 None:intergenic 25.0%
! ATTTAATACTTGCATGTTAC+AGG - chr8.3:29312143-29312162 MS.gene99555:intron 25.0%
! CTTCAATGAATTCCATTATT+GGG + chr8.3:29311662-29311681 None:intergenic 25.0%
! GATATATGTGATGTTTGAAA+TGG - chr8.3:29309736-29309755 MS.gene99555:intron 25.0%
! GCAAAAGAAGAAACATATAA+TGG + chr8.3:29311821-29311840 None:intergenic 25.0%
! GTTAATGAGAAATCAATTCA+AGG - chr8.3:29311631-29311650 MS.gene99555:intron 25.0%
! TAAGTTCATATTTGACAGTT+CGG + chr8.3:29311514-29311533 None:intergenic 25.0%
! TAGCTAAATGTTAAGACTTT+GGG - chr8.3:29310235-29310254 MS.gene99555:intron 25.0%
! TCTTCAATGAATTCCATTAT+TGG + chr8.3:29311663-29311682 None:intergenic 25.0%
! TTGTTTATAATAGTGATTGG+AGG - chr8.3:29309654-29309673 MS.gene99555:intron 25.0%
!! TTTAAGATATTCTCCAATGT+AGG + chr8.3:29309809-29309828 None:intergenic 25.0%
!!! ATTTGTCAATGCATTTTGAT+TGG - chr8.3:29310590-29310609 MS.gene99555:intron 25.0%
!!! GAAGAACATTTTCAAGTTTT+AGG + chr8.3:29310658-29310677 None:intergenic 25.0%
!!! GAGGATGTTTTTTGTAATTT+TGG + chr8.3:29311226-29311245 None:intergenic 25.0%
!!! TCAATCAATAGTTTGTTAAG+AGG + chr8.3:29312249-29312268 None:intergenic 25.0%
!!! TCTGAGTTTCGATTTTAATT+TGG - chr8.3:29310210-29310229 MS.gene99555:intron 25.0%
!!! TTGTAATCTGTTTTGAATCT+TGG - chr8.3:29309490-29309509 MS.gene99555:CDS 25.0%
AAATTTGCCACAGTTAGTTA+CGG + chr8.3:29312127-29312146 None:intergenic 30.0%
AATGAGAAATCAATTCAAGG+AGG - chr8.3:29311634-29311653 MS.gene99555:intron 30.0%
AATGAGAAATGAATCTAGTG+TGG - chr8.3:29312413-29312432 MS.gene99555:CDS 30.0%
AGCTAAATGTTAAGACTTTG+GGG - chr8.3:29310236-29310255 MS.gene99555:intron 30.0%
ATCAACCTATAATAGCTAAG+AGG + chr8.3:29310052-29310071 None:intergenic 30.0%
GAACTGTCAAATATGAACTT+AGG - chr8.3:29311513-29311532 MS.gene99555:intron 30.0%
GAAGAAACATATAATGGTCT+TGG + chr8.3:29311815-29311834 None:intergenic 30.0%
GATTCATTTCTCATTTCATC+AGG + chr8.3:29312408-29312427 None:intergenic 30.0%
GCAATTGTGCATCTATAAAT+AGG - chr8.3:29310137-29310156 MS.gene99555:intron 30.0%
TAGAAATGTGAATGTGGATT+TGG - chr8.3:29309779-29309798 MS.gene99555:CDS 30.0%
TATGTCAGCTTGACATTAAA+TGG + chr8.3:29311701-29311720 None:intergenic 30.0%
TCCAAGTGTTACCATTAAAA+AGG + chr8.3:29310104-29310123 None:intergenic 30.0%
TCGTATTAAATAGTGTAACG+CGG + chr8.3:29312010-29312029 None:intergenic 30.0%
TCTTCCAATGAATAAAGTCA+GGG - chr8.3:29310565-29310584 MS.gene99555:intron 30.0%
! AACCAATCTTTGCATTTTGT+CGG - chr8.3:29311891-29311910 MS.gene99555:intron 30.0%
! ATGTTATTTACTCCCAAAGT+CGG - chr8.3:29311073-29311092 MS.gene99555:CDS 30.0%
! GATGTTTGAAATGGTGAAAT+TGG - chr8.3:29309745-29309764 MS.gene99555:intron 30.0%
! GTTTTGTATGCATTAATTGC+TGG - chr8.3:29309516-29309535 MS.gene99555:CDS 30.0%
! TAATTTTGAATGGATCGGAT+TGG - chr8.3:29309699-29309718 MS.gene99555:intron 30.0%
! TCCTTTTTAATGGTAACACT+TGG - chr8.3:29310100-29310119 MS.gene99555:intron 30.0%
! TGCGTTATGATCCTTTTTAA+TGG - chr8.3:29310090-29310109 MS.gene99555:intron 30.0%
! TTTTGGTCGTTAAATCTGTT+AGG + chr8.3:29311346-29311365 None:intergenic 30.0%
!! AGTTTTGCATCTTTTGTTGT+TGG - chr8.3:29309837-29309856 MS.gene99555:intron 30.0%
!!! AGGATGTATTTTTTGTGCAA+GGG - chr8.3:29309674-29309693 MS.gene99555:intron 30.0%
!!! GTCGCAAAAAACCATTTTTT+AGG - chr8.3:29309541-29309560 MS.gene99555:CDS 30.0%
!!! TCAATGCATTTTGATTGGTT+TGG - chr8.3:29310595-29310614 MS.gene99555:intron 30.0%
!!! TTGTAATTTTGGCTAATTCG+AGG + chr8.3:29311215-29311234 None:intergenic 30.0%
AAAAGTTGAAAAGGAGAGCA+AGG - chr8.3:29310786-29310805 MS.gene99555:CDS 35.0%
AAAATCGAAACTCAGAACCA+TGG + chr8.3:29310206-29310225 None:intergenic 35.0%
AACCGACAAAATGCAAAGAT+TGG + chr8.3:29311896-29311915 None:intergenic 35.0%
AAGCAACCTTAAAATCAAGG+TGG - chr8.3:29312455-29312474 MS.gene99555:CDS 35.0%
AGCAACCTTAAAATCAAGGT+GGG - chr8.3:29312456-29312475 MS.gene99555:CDS 35.0%
AGTAAATAACATATCCCCAG+TGG + chr8.3:29311065-29311084 None:intergenic 35.0%
AGTATCAAAAGCAAGCCAAA+CGG + chr8.3:29309407-29309426 None:intergenic 35.0%
AGTTTATAGTGAGCTGCATA+TGG - chr8.3:29310175-29310194 MS.gene99555:intron 35.0%
ATAACAATGACATGCAGAGA+CGG + chr8.3:29311983-29312002 None:intergenic 35.0%
ATACATAGCTCAGAGGAAAT+TGG - chr8.3:29309363-29309382 MS.gene99555:CDS 35.0%
ATAGATTTGTCTCTTTGCAG+AGG - chr8.3:29309997-29310016 MS.gene99555:intron 35.0%
ATCTCCCTGACTTTATTCAT+TGG + chr8.3:29310572-29310591 None:intergenic 35.0%
ATTGAAGATACCTGTGTTAC+CGG - chr8.3:29311675-29311694 MS.gene99555:intron 35.0%
GAAATGGTGAAATTGGTGAA+TGG - chr8.3:29309752-29309771 MS.gene99555:intron 35.0%
GATTGATGTTAGATGCAAAG+TGG - chr8.3:29310892-29310911 MS.gene99555:CDS 35.0%
GGATGGTCAGATATGTATAA+TGG - chr8.3:29309930-29309949 MS.gene99555:intron 35.0%
GGGTCATATGTTCATATGAA+AGG - chr8.3:29311385-29311404 MS.gene99555:CDS 35.0%
GGTCAATAGAAATGTGAATG+TGG - chr8.3:29309773-29309792 MS.gene99555:CDS 35.0%
GTCTTCCAATGAATAAAGTC+AGG - chr8.3:29310564-29310583 MS.gene99555:intron 35.0%
TAACGACCAAAATGAGTGTT+CGG - chr8.3:29311354-29311373 MS.gene99555:CDS 35.0%
TACATAGCTCAGAGGAAATT+GGG - chr8.3:29309364-29309383 MS.gene99555:CDS 35.0%
TCATATGAAAGGAAAGCTTC+TGG - chr8.3:29311396-29311415 MS.gene99555:intron 35.0%
TCATTGGAAGACCTTTGTAA+CGG + chr8.3:29310556-29310575 None:intergenic 35.0%
TGAATCTAGTGTGGAAAAAG+TGG - chr8.3:29312422-29312441 MS.gene99555:CDS 35.0%
TGGAAAATTTAGCATATGCG+TGG - chr8.3:29309953-29309972 MS.gene99555:intron 35.0%
TGGATTTGGATTTCCTACAT+TGG - chr8.3:29309793-29309812 MS.gene99555:CDS 35.0%
TGGTCAGATATGTATAATGG+TGG - chr8.3:29309933-29309952 MS.gene99555:intron 35.0%
TTGTATGCATTAATTGCTGG+TGG - chr8.3:29309519-29309538 MS.gene99555:CDS 35.0%
TTTAATGGTAACACTTGGAG+CGG - chr8.3:29310105-29310124 MS.gene99555:intron 35.0%
! ATGTCTTGTTCTTCTTCATC+TGG - chr8.3:29309253-29309272 MS.gene99555:CDS 35.0%
! CAATATCCGAACACTCATTT+TGG + chr8.3:29311363-29311382 None:intergenic 35.0%
! GGGTGTAATTTTGAATGGAT+CGG - chr8.3:29309694-29309713 MS.gene99555:intron 35.0%
! TACGAAGTGTTCTCAAATAG+TGG - chr8.3:29312025-29312044 MS.gene99555:intron 35.0%
! TGGTTTGGATTACTTGCATA+GGG - chr8.3:29310610-29310629 MS.gene99555:intron 35.0%
! TGTCTTGTTCTTCTTCATCT+GGG - chr8.3:29309254-29309273 MS.gene99555:CDS 35.0%
! TTAGCATATGCGTGGAATTT+TGG - chr8.3:29309961-29309980 MS.gene99555:intron 35.0%
! TTTTGGTCCTTGAATGTGTT+AGG - chr8.3:29311174-29311193 MS.gene99555:CDS 35.0%
!! AGATGCAAAGTGGTTGATTT+TGG - chr8.3:29310902-29310921 MS.gene99555:CDS 35.0%
!! TGATTTTGGAAATGCGTGTT+GGG - chr8.3:29310916-29310935 MS.gene99555:CDS 35.0%
!! TGCAAGGGTGTAATTTTGAA+TGG - chr8.3:29309689-29309708 MS.gene99555:intron 35.0%
!! TTGATTTTGGAAATGCGTGT+TGG - chr8.3:29310915-29310934 MS.gene99555:CDS 35.0%
!! TTGGTTTGGATTACTTGCAT+AGG - chr8.3:29310609-29310628 MS.gene99555:intron 35.0%
!!! GAGGATGTATTTTTTGTGCA+AGG - chr8.3:29309673-29309692 MS.gene99555:intron 35.0%
AAGGATTTCTTCGACAGACA+CGG - chr8.3:29312189-29312208 MS.gene99555:intron 40.0%
AATGAGTGTTCGGATATTGC+AGG - chr8.3:29311364-29311383 MS.gene99555:CDS 40.0%
AGCAAAAGACCACATATCCA+CGG + chr8.3:29311023-29311042 None:intergenic 40.0%
AGCTGCATATGGAAATACCA+TGG - chr8.3:29310186-29310205 MS.gene99555:intron 40.0%
AGTGTGGAAAAAGTGGATGT+TGG - chr8.3:29312429-29312448 MS.gene99555:CDS 40.0%
AGTTACGGTGTAGTCAATCA+TGG + chr8.3:29312112-29312131 None:intergenic 40.0%
ATGAGTGTTCGGATATTGCA+GGG - chr8.3:29311365-29311384 MS.gene99555:CDS 40.0%
CTAAAACCTTGTCCGACTTT+GGG + chr8.3:29311088-29311107 None:intergenic 40.0%
GAAATTCGAGTACCATGCAT+TGG + chr8.3:29310499-29310518 None:intergenic 40.0%
GATTACTTGCATAGGGAACA+TGG - chr8.3:29310617-29310636 MS.gene99555:intron 40.0%
GCAACCTTAAAATCAAGGTG+GGG - chr8.3:29312457-29312476 MS.gene99555:CDS 40.0%
GCTTAAAGTGGTCGATCAAT+TGG + chr8.3:29310454-29310473 None:intergenic 40.0%
GGAAAACAAAAATTCCGCAC+AGG + chr8.3:29310263-29310282 None:intergenic 40.0%
GGATTGAGAACATACATCGT+TGG + chr8.3:29309431-29309450 None:intergenic 40.0%
GTCAGATACAACCGTTACAA+AGG - chr8.3:29310542-29310561 MS.gene99555:intron 40.0%
GTCTGAATTTCTTCCGCAAA+TGG + chr8.3:29310950-29310969 None:intergenic 40.0%
GTGAGTTGTCTGATCTTGAT+TGG - chr8.3:29309909-29309928 MS.gene99555:intron 40.0%
GTTAGCACCTAACACATTCA+AGG + chr8.3:29311184-29311203 None:intergenic 40.0%
GTTCTTTCATCCATTGCTGA+TGG - chr8.3:29310401-29310420 MS.gene99555:intron 40.0%
GTTGTCTGATCTTGATTGGA+TGG - chr8.3:29309913-29309932 MS.gene99555:intron 40.0%
TCAGCTTGACATTAAATGGC+CGG + chr8.3:29311697-29311716 None:intergenic 40.0%
TGCATGGTACTCGAATTTCT+TGG - chr8.3:29310500-29310519 MS.gene99555:intron 40.0%
TTGCGCCTCTTAGCTATTAT+AGG - chr8.3:29310044-29310063 MS.gene99555:intron 40.0%
TTTAAGCACACAGGTCCTAA+CGG - chr8.3:29310467-29310486 MS.gene99555:intron 40.0%
! ACTTCCCCACCTTGATTTTA+AGG + chr8.3:29312464-29312483 None:intergenic 40.0%
! ATGAAGGCTTTGATTCCTAC+CGG - chr8.3:29309290-29309309 MS.gene99555:CDS 40.0%
! GGATTCGGAGGCTAAAATTT+TGG - chr8.3:29312223-29312242 MS.gene99555:intron 40.0%
! TCTGGTTTCTACTATCGATC+CGG - chr8.3:29310676-29310695 MS.gene99555:CDS 40.0%
ACGGGGATCTCAAAAGGATT+CGG - chr8.3:29312208-29312227 MS.gene99555:intron 45.0%
AGCTCAGAGGAAATTGGGTT+GGG - chr8.3:29309369-29309388 MS.gene99555:CDS 45.0%
AGCTCCTGAAGTTATACTGC+AGG - chr8.3:29310982-29311001 MS.gene99555:CDS 45.0%
AGGATTTCTTCGACAGACAC+GGG - chr8.3:29312190-29312209 MS.gene99555:intron 45.0%
AGGCCTGAGGGAAACATAAA+CGG - chr8.3:29310740-29310759 MS.gene99555:CDS 45.0%
AGGGCGGTAGCTAAAATTTC+TGG - chr8.3:29310809-29310828 MS.gene99555:CDS 45.0%
AGTTGAAAAGGAGAGCAAGG+AGG - chr8.3:29310789-29310808 MS.gene99555:CDS 45.0%
ATCGACCACTTTAAGCACAC+AGG - chr8.3:29310458-29310477 MS.gene99555:intron 45.0%
ATGTTACAGGTTGCTACTGC+AGG - chr8.3:29312156-29312175 MS.gene99555:intron 45.0%
ATTCCTTCTCCGTGGATATG+TGG - chr8.3:29311011-29311030 MS.gene99555:CDS 45.0%
CATTAAATGGCCGGTAACAC+AGG + chr8.3:29311688-29311707 None:intergenic 45.0%
CCAAACTAACGAGACATTGG+AGG + chr8.3:29311245-29311264 None:intergenic 45.0%
CCTCCAATGTCTCGTTAGTT+TGG - chr8.3:29311242-29311261 MS.gene99555:CDS 45.0%
CTGAGCTATGTATCTTCCAC+CGG + chr8.3:29309356-29309375 None:intergenic 45.0%
CTTTGTGAGTCTCTACACCT+CGG - chr8.3:29311853-29311872 MS.gene99555:intron 45.0%
GACTACACCGTAACTAACTG+TGG - chr8.3:29312117-29312136 MS.gene99555:intron 45.0%
GCTAAAACCTTGTCCGACTT+TGG + chr8.3:29311089-29311108 None:intergenic 45.0%
GGACCAAACTAACGAGACAT+TGG + chr8.3:29311248-29311267 None:intergenic 45.0%
GTCTCTTTGCAGAGGACTTA+AGG - chr8.3:29310005-29310024 MS.gene99555:intron 45.0%
GTGGAAGATACATAGCTCAG+AGG - chr8.3:29309356-29309375 MS.gene99555:CDS 45.0%
GTGTCTGTCGAAGAAATCCT+TGG + chr8.3:29312190-29312209 None:intergenic 45.0%
GTTGAAAAGGAGAGCAAGGA+GGG - chr8.3:29310790-29310809 MS.gene99555:CDS 45.0%
TACTGCAGGAGTGAAATCCA+AGG - chr8.3:29312170-29312189 MS.gene99555:intron 45.0%
TAGCTCAGAGGAAATTGGGT+TGG - chr8.3:29309368-29309387 MS.gene99555:CDS 45.0%
TAGGACCTGTGTGCTTAAAG+TGG + chr8.3:29310466-29310485 None:intergenic 45.0%
TCCAAGGAGTTCCATCATCA+GGG + chr8.3:29311933-29311952 None:intergenic 45.0%
TCGGGTGCAAAATCAAGAAG+AGG + chr8.3:29312324-29312343 None:intergenic 45.0%
TCTGGACAACGAGCTTCTAT+GGG - chr8.3:29310827-29310846 MS.gene99555:CDS 45.0%
TTATCCTGACATGCTATCCG+AGG + chr8.3:29311873-29311892 None:intergenic 45.0%
TTCCAAGGAGTTCCATCATC+AGG + chr8.3:29311934-29311953 None:intergenic 45.0%
TTCTGGACAACGAGCTTCTA+TGG - chr8.3:29310826-29310845 MS.gene99555:CDS 45.0%
TTGGGCTGATAAGCCATTTG+CGG - chr8.3:29310934-29310953 MS.gene99555:CDS 45.0%
TTTACTCCCAAAGTCGGACA+AGG - chr8.3:29311079-29311098 MS.gene99555:CDS 45.0%
TTTGATTCCTACCGGAAAGG+TGG - chr8.3:29309298-29309317 MS.gene99555:CDS 45.0%
! AAGTGCAGCACAGTTTGTTC+AGG - chr8.3:29310358-29310377 MS.gene99555:intron 45.0%
! AGTCCTTTTCCATGAGCCAA+GGG + chr8.3:29312380-29312399 None:intergenic 45.0%
! CAAACTGTGCTGCACTTTTC+TGG + chr8.3:29310355-29310374 None:intergenic 45.0%
! GGGTCTGAAGATGATGATGA+AGG - chr8.3:29309274-29309293 MS.gene99555:CDS 45.0%
!! AGGAAAGCTTCTGGAACAGT+TGG - chr8.3:29311405-29311424 MS.gene99555:intron 45.0%
!! CTTTGCATTTTGTCGGTTGC+AGG - chr8.3:29311898-29311917 MS.gene99555:intron 45.0%
!! TTCAAGGAGGCACCCAATAA+TGG - chr8.3:29311647-29311666 MS.gene99555:intron 45.0%
AACTCCTTGGAAAGATGCCC+CGG - chr8.3:29311942-29311961 MS.gene99555:intron 50.0%
AAGGTGGATACCATGCTGTC+CGG - chr8.3:29309314-29309333 MS.gene99555:CDS 50.0%
ACAATGACATGCAGAGACGG+TGG + chr8.3:29311980-29311999 None:intergenic 50.0%
ACACCCTTGGCTCATGGAAA+AGG - chr8.3:29312374-29312393 MS.gene99555:CDS 50.0%
ACAGACACGGGGATCTCAAA+AGG - chr8.3:29312202-29312221 MS.gene99555:intron 50.0%
ACGAGCTTCTATGGGAGGAA+TGG - chr8.3:29310835-29310854 MS.gene99555:CDS 50.0%
AGACCACATATCCACGGAGA+AGG + chr8.3:29311017-29311036 None:intergenic 50.0%
ATGGTATCCACCTTTCCGGT+AGG + chr8.3:29309308-29309327 None:intergenic 50.0%
ATTGCTTTCGAGCTTGCCAC+TGG - chr8.3:29311046-29311065 MS.gene99555:CDS 50.0%
CAATGACATGCAGAGACGGT+GGG + chr8.3:29311979-29311998 None:intergenic 50.0%
CAGCATGGTATCCACCTTTC+CGG + chr8.3:29309312-29309331 None:intergenic 50.0%
CCAGCCTGCAGTATAACTTC+AGG + chr8.3:29310989-29311008 None:intergenic 50.0%
CCTGAAGTTATACTGCAGGC+TGG - chr8.3:29310986-29311005 MS.gene99555:CDS 50.0%
CGAGCTTCTATGGGAGGAAT+GGG - chr8.3:29310836-29310855 MS.gene99555:CDS 50.0%
GATCTAACAGGGTCTTTCGC+CGG + chr8.3:29310698-29310717 None:intergenic 50.0%
GCGAAAGACCCTGTTAGATC+GGG - chr8.3:29310698-29310717 MS.gene99555:CDS 50.0%
GGATTTCTTCGACAGACACG+GGG - chr8.3:29312191-29312210 MS.gene99555:intron 50.0%
GGCGAAAGACCCTGTTAGAT+CGG - chr8.3:29310697-29310716 MS.gene99555:CDS 50.0%
GGGATCTCAAAAGGATTCGG+AGG - chr8.3:29312211-29312230 MS.gene99555:intron 50.0%
TACACCTCGGATAGCATGTC+AGG - chr8.3:29311866-29311885 MS.gene99555:intron 50.0%
TGAGGGAAACATAAACGGCG+CGG - chr8.3:29310745-29310764 MS.gene99555:CDS 50.0%
TTCTGCAGTTGGTCGCTTCT+CGG + chr8.3:29312343-29312362 None:intergenic 50.0%
TTGCTTTCGAGCTTGCCACT+GGG - chr8.3:29311047-29311066 MS.gene99555:CDS 50.0%
TTTGCCACGCTGCAAAGCTA+TGG + chr8.3:29312062-29312081 None:intergenic 50.0%
! GAGTCCTTTTCCATGAGCCA+AGG + chr8.3:29312381-29312400 None:intergenic 50.0%
! GCTCAGAGGAAATTGGGTTG+GGG - chr8.3:29309370-29309389 MS.gene99555:CDS 50.0%
! GGCTTTGATTCCTACCGGAA+AGG - chr8.3:29309295-29309314 MS.gene99555:CDS 50.0%
! GGGGTCAGTTTTCAACCGTT+TGG - chr8.3:29309389-29309408 MS.gene99555:CDS 50.0%
!! ACAAGGTTTTAGCGAGGACG+AGG - chr8.3:29311096-29311115 MS.gene99555:CDS 50.0%
!! AGTCGGACAAGGTTTTAGCG+AGG - chr8.3:29311090-29311109 MS.gene99555:CDS 50.0%
!! CCCTCAGGCCTCTCTAAAAT+CGG + chr8.3:29310731-29310750 None:intergenic 50.0%
!! CCGATTTTAGAGAGGCCTGA+GGG - chr8.3:29310728-29310747 MS.gene99555:CDS 50.0%
!! CCTCAGGCCTCTCTAAAATC+GGG + chr8.3:29310730-29310749 None:intergenic 50.0%
!! CTCAGGCCTCTCTAAAATCG+GGG + chr8.3:29310729-29310748 None:intergenic 50.0%
!! GAGTCTCCCCGATTTTAGAG+AGG - chr8.3:29310720-29310739 MS.gene99555:CDS 50.0%
!! TAAGACTTTGGGGTCCTGTG+CGG - chr8.3:29310246-29310265 MS.gene99555:intron 50.0%
AACAGTGCCTGCAACACCCT+TGG - chr8.3:29312361-29312380 MS.gene99555:CDS 55.0%
ACGGTGGGAACACTACCTTC+CGG + chr8.3:29311964-29311983 None:intergenic 55.0%
AGGTGGATACCATGCTGTCC+GGG - chr8.3:29309315-29309334 MS.gene99555:CDS 55.0%
GAAAAGGAGAGCAAGGAGGG+CGG - chr8.3:29310793-29310812 MS.gene99555:CDS 55.0%
GCGCCGTTTATGTTTCCCTC+AGG + chr8.3:29310746-29310765 None:intergenic 55.0%
GGACAACGAGCTTCTATGGG+AGG - chr8.3:29310830-29310849 MS.gene99555:CDS 55.0%
GGAGTTCCATCATCAGGGCA+AGG + chr8.3:29311928-29311947 None:intergenic 55.0%
GGATCACCTTGCCCTGATGA+TGG - chr8.3:29311919-29311938 MS.gene99555:intron 55.0%
GGGAGACTCCCGATCTAACA+GGG + chr8.3:29310709-29310728 None:intergenic 55.0%
TAACGGCCAGCACCAATGCA+TGG - chr8.3:29310484-29310503 MS.gene99555:intron 55.0%
TCTGCAGTTGGTCGCTTCTC+GGG + chr8.3:29312342-29312361 None:intergenic 55.0%
TGCTTTCGAGCTTGCCACTG+GGG - chr8.3:29311048-29311067 MS.gene99555:CDS 55.0%
! AGCACCATAGCTTTGCAGCG+TGG - chr8.3:29312055-29312074 MS.gene99555:intron 55.0%
! CGAGTACCATGCATTGGTGC+TGG + chr8.3:29310493-29310512 None:intergenic 55.0%
! GGCTGGTTATTCCTTCTCCG+TGG - chr8.3:29311003-29311022 MS.gene99555:CDS 55.0%
! TGCAGGCACTGTTCTGCAGT+TGG + chr8.3:29312354-29312373 None:intergenic 55.0%
!! ATGCATTGGTGCTGGCCGTT+AGG + chr8.3:29310485-29310504 None:intergenic 55.0%
!! CCCGATTTTAGAGAGGCCTG+AGG - chr8.3:29310727-29310746 MS.gene99555:CDS 55.0%
!! GCCCTGATGATGGAACTCCT+TGG - chr8.3:29311929-29311948 MS.gene99555:intron 55.0%
CCTGCAACACCCTTGGCTCA+TGG - chr8.3:29312368-29312387 MS.gene99555:CDS 60.0%
CCTTGGAAAGATGCCCCGGA+AGG - chr8.3:29311946-29311965 MS.gene99555:intron 60.0%
CGGTGGGAACACTACCTTCC+GGG + chr8.3:29311963-29311982 None:intergenic 60.0%
GGATACCATGCTGTCCGGGT+CGG - chr8.3:29309319-29309338 MS.gene99555:CDS 60.0%
GGGGAGACTCCCGATCTAAC+AGG + chr8.3:29310710-29310729 None:intergenic 60.0%
GGTGGGAACACTACCTTCCG+GGG + chr8.3:29311962-29311981 None:intergenic 60.0%
! CCTTCCGGGGCATCTTTCCA+AGG + chr8.3:29311949-29311968 None:intergenic 60.0%
!! CCATGAGCCAAGGGTGTTGC+AGG + chr8.3:29312371-29312390 None:intergenic 60.0%
!! TGAAGGGGCGCCATCAGCAA+TGG + chr8.3:29310414-29310433 None:intergenic 60.0%
CGGCGAACTGATCACCGACC+CGG + chr8.3:29309336-29309355 None:intergenic 65.0%
CGGGTCGGTGATCAGTTCGC+CGG - chr8.3:29309334-29309353 MS.gene99555:CDS 65.0%
GATCACCGACCCGGACAGCA+TGG + chr8.3:29309327-29309346 None:intergenic 65.0%
GTCGGTGATCAGTTCGCCGG+TGG - chr8.3:29309337-29309356 MS.gene99555:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 29309253 29312485 29309253 ID=MS.gene99555
chr8.3 mRNA 29309253 29312485 29309253 ID=MS.gene99555.t1;Parent=MS.gene99555
chr8.3 exon 29312303 29312485 29312303 ID=MS.gene99555.t1.exon1;Parent=MS.gene99555.t1
chr8.3 CDS 29312303 29312485 29312303 ID=cds.MS.gene99555.t1;Parent=MS.gene99555.t1
chr8.3 exon 29310621 29311406 29310621 ID=MS.gene99555.t1.exon2;Parent=MS.gene99555.t1
chr8.3 CDS 29310621 29311406 29310621 ID=cds.MS.gene99555.t1;Parent=MS.gene99555.t1
chr8.3 exon 29309771 29309818 29309771 ID=MS.gene99555.t1.exon3;Parent=MS.gene99555.t1
chr8.3 CDS 29309771 29309818 29309771 ID=cds.MS.gene99555.t1;Parent=MS.gene99555.t1
chr8.3 exon 29309253 29309573 29309253 ID=MS.gene99555.t1.exon4;Parent=MS.gene99555.t1
chr8.3 CDS 29309253 29309573 29309253 ID=cds.MS.gene99555.t1;Parent=MS.gene99555.t1
Gene Sequence

>MS.gene99555

ATGTCTTGTTCTTCTTCATCTGGGTCTGAAGATGATGATGAAGGCTTTGATTCCTACCGGAAAGGTGGATACCATGCTGTCCGGGTCGGTGATCAGTTCGCCGGTGGAAGATACATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTTTCAACCGTTTGGCTTGCTTTTGATACTACCAACGATGTATGTTCTCAATCCTAAAGATAAAGATTTGTTTTGAATACCCTTTTTGTATTATTGTAATCTGTTTTGAATCTTGGTTTGTTTTGTATGCATTAATTGCTGGTGGTCGCAAAAAACCATTTTTTAGGTTCATTGAATAACTGAATAACGTATGTATTTTGTAAATATTATAGATCAGATACATCAATTATACAATAAACTTAAAAAGTTATTATTTTTTGTTTATAATAGTGATTGGAGGATGTATTTTTTGTGCAAGGGTGTAATTTTGAATGGATCGGATTGGTATGATTTGAATTTGATATATGTGATGTTTGAAATGGTGAAATTGGTGAATGGTCAATAGAAATGTGAATGTGGATTTGGATTTCCTACATTGGAGAATATCTTAAAGTTCCTATAGTTTTGCATCTTTTGTTGTTGGATCTATATTTTAATTCAGTACTTTGTACCGTATTTATCGATTTGAAAATGTGAGTTGTCTGATCTTGATTGGATGGTCAGATATGTATAATGGTGGAAAATTTAGCATATGCGTGGAATTTTGGATTTCTTGATTGCATAGATTTGTCTCTTTGCAGAGGACTTAAGGAGTGATAAATGTGTTTTTGCGCCTCTTAGCTATTATAGGTTGATAATGATTGGGTAATCTCGTGCGTTATGATCCTTTTTAATGGTAACACTTGGAGCGGTTTGTGTGAGCAATTGTGCATCTATAAATAGGTTAATTTTGTTGGACAGTTTATAGTGAGCTGCATATGGAAATACCATGGTTCTGAGTTTCGATTTTAATTTGGCATAGCTAAATGTTAAGACTTTGGGGTCCTGTGCGGAATTTTTGTTTTCCTTTTATTTCTTGTCAAATATCTTTCTGATTTTATGTTTGTGATTTTCAGACATATGTTGCTCTGAAGATCCAGAAAAGTGCAGCACAGTTTGTTCAGGCTGCTCTTCACGAGATAGATGTTCTTTCATCCATTGCTGATGGCGCCCCTTCAAATTCAAAATTTGTTGTCCAATTGATCGACCACTTTAAGCACACAGGTCCTAACGGCCAGCACCAATGCATGGTACTCGAATTTCTTGGAGATAGCTTGCTACGTCTAGTCAGATACAACCGTTACAAAGGTCTTCCAATGAATAAAGTCAGGGAGATTTGTCAATGCATTTTGATTGGTTTGGATTACTTGCATAGGGAACATGGTATTATACACACAGACCTAAAACTTGAAAATGTTCTTCTGGTTTCTACTATCGATCCGGCGAAAGACCCTGTTAGATCGGGAGTCTCCCCGATTTTAGAGAGGCCTGAGGGAAACATAAACGGCGCGGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCGGTAGCTAAAATTTCTGGACAACGAGCTTCTATGGGAGGAATGGGAGAAGCTCCAAATTCTGATAGAAATATTGATGGGATTGATGTTAGATGCAAAGTGGTTGATTTTGGAAATGCGTGTTGGGCTGATAAGCCATTTGCGGAAGAAATTCAGACACGACAGTATAGAGCTCCTGAAGTTATACTGCAGGCTGGTTATTCCTTCTCCGTGGATATGTGGTCTTTTGCTTGTATTGCTTTCGAGCTTGCCACTGGGGATATGTTATTTACTCCCAAAGTCGGACAAGGTTTTAGCGAGGACGAGGTATGATTGTTAGTTTGTATGCTATTGCTATTTAAATGTTATTGAATAAACAGTCATTTTGGTCCTTGAATGTGTTAGGTGCTAACGTTATAGTCCTCGAATTAGCCAAAATTACAAAAAACATCCTCCAATGTCTCGTTAGTTTGGTCCATCAAATTACTAACAGAAGATACACACAAAGATGTTTTTGTAATTTCAACATGTTTAAGAACATTAGTGACACTGCCTAACAGATTTAACGACCAAAATGAGTGTTCGGATATTGCAGGGTCATATGTTCATATGAAAGGAAAGCTTCTGGAACAGTTGGAACAGTTTAAAACTGTCATCTAAGAATTCCTAACTATACATGATATAATAGATTATTAGATCACATTTCTGTCAACAGAAAAGCCGAACTGTCAAATATGAACTTAGGATTTTTAACTATCATAGATGATTGCTCAAAAAAAATAAAAATATCATAGATGCATTTATAATAGTTGTTACTTTATTGAGGAATATGTGAATGATGTTAATGAGAAATCAATTCAAGGAGGCACCCAATAATGGAATTCATTGAAGATACCTGTGTTACCGGCCATTTAATGTCAAGCTGACATATATCTATGAATTCTATCTAACACTAAAGTTCTTTTCATTTGACTTCAGAATATAGTTTTGAATCTTTGATTGGACTTTACATAATATAGTACCAAGACCATTATATGTTTCTTCTTTTGCTTGTTTCTGATGCTTTGTGAGTCTCTACACCTCGGATAGCATGTCAGGATAACCAATCTTTGCATTTTGTCGGTTGCAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTAGTGTTCCCACCGTCTCTGCATGTCATTGTTATTGTTCCGCGTTACACTATTTAATACGAAGTGTTCTCAAATAGTGGCTTTAGCAGCACCATAGCTTTGCAGCGTGGCAAAATTTAACAAATTGATATTTTCTGCAATCCATGATTGACTACACCGTAACTAACTGTGGCAAATTTAATACTTGCATGTTACAGGTTGCTACTGCAGGAGTGAAATCCAAGGATTTCTTCGACAGACACGGGGATCTCAAAAGGATTCGGAGGCTAAAATTTTGGCCTCTTAACAAACTATTGATTGAAAGATACAAATTATCAGAGAGTGATGCTCATGAATTTTCAGAGTTTCTTTTACCTCTTCTTGATTTTGCACCCGAGAAGCGACCAACTGCAGAACAGTGCCTGCAACACCCTTGGCTCATGGAAAAGGACTCTGTTCCTGATGAAATGAGAAATGAATCTAGTGTGGAAAAAGTGGATGTTGGAATAAGCAACCTTAAAATCAAGGTGGGGAAGTGA
Protein sequence

>MS.gene99555.t1

MSCSSSSGSEDDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAFDTTNDTYVALKIQKSAAQFVQAALHEIDVLSSIADGAPSNSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLVRYNRYKGLPMNKVREICQCILIGLDYLHREHGIIHTDLKLENVLLVSTIDPAKDPVRSGVSPILERPEGNINGAVTSLIEKKLKRRARRAVAKISGQRASMGGMGEAPNSDRNIDGIDVRCKVVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVATAGVKSKDFFDRHGDLKRIRRLKFWPLNKLLIERYKLSESDAHEFSEFLLPLLDFAPEKRPTAEQCLQHPWLMEKDSVPDEMRNESSVEKVDVGISNLKIKVGK