AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72659

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72659.t1 MTR_5g024270 98.655 446 6 0 1 446 1 446 0.0 918
MS.gene72659.t1 MTR_8g073250 81.839 446 77 2 1 446 1 442 0.0 737
MS.gene72659.t1 MTR_5g024270 97.953 342 7 0 1 342 1 342 0.0 700
MS.gene72659.t1 MTR_1g061690 52.532 474 165 6 2 416 8 480 1.17e-172 495
MS.gene72659.t1 MTR_2g084555 48.062 516 188 5 6 442 8 522 2.20e-167 481
MS.gene72659.t1 MTR_4g056390 51.068 468 164 5 12 415 13 479 1.69e-166 479
MS.gene72659.t1 MTR_3g109390 31.008 387 197 10 37 414 51 376 5.56e-43 155
MS.gene72659.t1 MTR_3g109390 31.008 387 197 10 37 414 73 398 9.37e-43 155
MS.gene72659.t1 MTR_3g109390 31.266 387 194 11 37 414 73 396 3.64e-42 154
MS.gene72659.t1 MTR_3g109390 31.034 377 190 11 47 414 70 385 1.06e-40 149
MS.gene72659.t1 MTR_3g109390 30.952 378 191 11 47 415 92 408 1.43e-40 150
MS.gene72659.t1 MTR_3g076540 27.475 404 221 10 21 414 78 419 2.38e-37 141
MS.gene72659.t1 MTR_3g076540 28.278 389 208 10 36 414 10 337 9.21e-37 138
MS.gene72659.t1 MTR_3g109390 31.875 320 157 8 37 356 73 331 1.14e-36 137
MS.gene72659.t1 MTR_4g104620 28.180 401 216 11 21 411 82 420 2.17e-36 139
MS.gene72659.t1 MTR_4g104620 28.496 379 200 10 43 411 9 326 3.00e-35 134
MS.gene72659.t1 MTR_3g076540 28.084 381 203 10 44 414 1 320 3.70e-35 133
MS.gene72659.t1 MTR_3g076540 26.942 412 221 11 21 414 78 427 7.53e-35 134
MS.gene72659.t1 MTR_4g104620 28.307 378 200 10 44 411 1 317 1.01e-34 132
MS.gene72659.t1 MTR_3g086530 28.024 339 185 9 21 358 77 357 4.62e-34 131
MS.gene72659.t1 MTR_3g086530 27.586 406 222 12 21 415 77 421 6.49e-34 132
MS.gene72659.t1 MTR_3g086530 28.099 363 190 11 64 415 2 304 2.52e-30 119
MS.gene72659.t1 MTR_3g086530 28.223 287 154 8 21 306 77 312 1.31e-27 112
MS.gene72659.t1 MTR_5g082700 24.242 396 206 11 29 414 394 705 7.89e-23 102
MS.gene72659.t1 MTR_3g086530 27.632 304 154 9 123 415 1 249 8.86e-22 94.7
MS.gene72659.t1 MTR_8g070930 39.310 145 82 3 37 180 138 277 2.62e-21 97.4
MS.gene72659.t1 MTR_8g070930 39.450 109 58 3 254 361 285 386 2.10e-13 73.2
MS.gene72659.t1 MTR_6g074905 31.361 169 101 5 252 414 1005 1164 5.46e-19 90.5
MS.gene72659.t1 MTR_0349s0030 31.176 170 102 5 252 415 125 285 6.37e-19 87.0
MS.gene72659.t1 MTR_5g082700 33.548 155 94 3 29 179 394 543 1.80e-15 79.0
MS.gene72659.t1 MTR_5g082700 33.333 153 93 3 29 177 394 541 2.16e-15 79.0
MS.gene72659.t1 MTR_1g111180 34.615 182 85 8 254 414 822 990 1.73e-14 76.6
MS.gene72659.t1 MTR_1g111180 30.233 172 101 5 11 177 657 814 2.27e-13 72.8
MS.gene72659.t1 MTR_1g111180 34.615 182 85 8 254 414 823 991 1.73e-14 76.6
MS.gene72659.t1 MTR_1g111180 30.233 172 101 5 11 177 658 815 2.27e-13 72.8
MS.gene72659.t1 MTR_6g074870 30.645 124 75 3 252 371 236 352 8.50e-13 69.7
MS.gene72659.t1 MTR_6g074750 43.333 60 32 1 252 309 54 113 7.02e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72659.t1 AT4G35500 72.646 446 110 4 1 443 1 437 0.0 651
MS.gene72659.t1 AT2G17530 75.281 445 99 4 1 443 1 436 0.0 643
MS.gene72659.t1 AT2G17530 75.281 445 99 4 1 443 1 436 0.0 643
MS.gene72659.t1 AT4G35500 70.470 447 119 5 1 443 1 438 0.0 626
MS.gene72659.t1 AT2G17530 79.009 343 69 3 1 341 1 342 0.0 513
MS.gene72659.t1 AT3G53030 49.505 505 186 8 5 442 7 509 7.01e-169 485
MS.gene72659.t1 AT3G44850 51.183 465 165 5 12 415 19 482 7.41e-162 468
MS.gene72659.t1 AT5G22840 50.323 465 174 5 4 415 11 471 7.75e-162 468
MS.gene72659.t1 AT4G32660 30.123 405 209 12 21 414 47 388 1.26e-41 152
MS.gene72659.t1 AT4G32660 30.123 405 209 12 21 414 55 396 1.45e-41 152
MS.gene72659.t1 AT4G24740 28.571 406 214 11 21 414 44 385 3.12e-38 143
MS.gene72659.t1 AT4G24740 28.571 406 214 11 21 414 82 423 8.44e-38 142
MS.gene72659.t1 AT4G32660 30.861 337 171 10 21 356 55 330 1.87e-37 140
MS.gene72659.t1 AT4G24740 28.721 383 198 10 44 414 1 320 1.47e-36 137
MS.gene72659.t1 AT4G24740 28.721 383 198 10 44 414 1 320 1.47e-36 137
MS.gene72659.t1 AT4G24740 28.721 383 198 10 44 414 1 320 1.47e-36 137
MS.gene72659.t1 AT4G24740 29.595 321 167 8 21 341 82 343 7.22e-34 130
MS.gene72659.t1 AT4G32660 30.814 344 165 12 82 414 3 284 1.37e-32 125
MS.gene72659.t1 AT4G24740 29.866 298 151 7 44 341 1 240 1.44e-32 124
MS.gene72659.t1 AT4G24740 29.371 286 150 7 21 306 82 315 8.29e-28 113
MS.gene72659.t1 AT5G35980 38.000 150 87 3 37 185 121 265 1.39e-21 98.2
MS.gene72659.t1 AT5G35980 42.424 99 50 2 254 352 267 358 5.99e-15 77.8
MS.gene72659.t1 AT5G35980 38.000 150 87 3 37 185 121 265 1.45e-21 98.6
MS.gene72659.t1 AT5G35980 42.424 99 50 2 254 352 267 358 5.45e-15 78.2
MS.gene72659.t1 AT5G35980 38.000 150 87 3 37 185 86 230 1.46e-21 98.2
MS.gene72659.t1 AT5G35980 42.424 99 50 2 254 352 232 323 5.61e-15 77.8
MS.gene72659.t1 AT4G24740 29.057 265 119 7 162 414 10 217 5.09e-21 91.7
MS.gene72659.t1 AT4G24740 29.057 265 119 7 162 414 10 217 5.09e-21 91.7
MS.gene72659.t1 AT1G73460 32.941 170 99 5 252 415 1001 1161 5.38e-21 96.7
MS.gene72659.t1 AT1G73460 32.258 155 96 3 29 179 849 998 3.91e-13 72.4
MS.gene72659.t1 AT1G73460 32.941 170 99 5 252 415 1001 1161 5.38e-21 96.7
MS.gene72659.t1 AT1G73460 32.258 155 96 3 29 179 849 998 3.91e-13 72.4
MS.gene72659.t1 AT1G73450 32.941 170 99 5 252 415 984 1144 6.24e-21 96.7
MS.gene72659.t1 AT1G73450 32.258 155 96 3 29 179 832 981 4.40e-13 72.0
MS.gene72659.t1 AT2G40120 23.250 400 215 12 29 419 252 568 1.32e-19 92.0
MS.gene72659.t1 AT3G53570 35.000 160 97 4 21 180 99 251 4.06e-19 89.7
MS.gene72659.t1 AT3G53570 30.857 175 96 5 254 415 282 444 1.97e-16 81.6
MS.gene72659.t1 AT3G53570 35.000 160 97 4 21 180 99 251 4.06e-19 89.7
MS.gene72659.t1 AT3G53570 30.857 175 96 5 254 415 282 444 1.97e-16 81.6
MS.gene72659.t1 AT3G53570 35.000 160 97 4 21 180 99 251 4.06e-19 89.7
MS.gene72659.t1 AT3G53570 30.857 175 96 5 254 415 282 444 1.97e-16 81.6
MS.gene72659.t1 AT3G53570 35.000 160 97 4 21 180 85 237 4.34e-19 89.7
MS.gene72659.t1 AT3G53570 30.857 175 96 5 254 415 268 430 2.26e-16 81.6
MS.gene72659.t1 AT3G53570 35.000 160 97 4 21 180 85 237 4.34e-19 89.7
MS.gene72659.t1 AT3G53570 30.857 175 96 5 254 415 268 430 2.26e-16 81.6
MS.gene72659.t1 AT3G17750 31.953 169 100 5 252 414 970 1129 1.08e-17 86.7
MS.gene72659.t1 AT3G17750 31.953 169 102 5 15 179 808 967 3.95e-13 72.4
MS.gene72659.t1 AT3G53640 32.961 179 93 6 254 414 470 639 1.26e-16 82.8
MS.gene72659.t1 AT3G53640 30.814 172 100 5 11 177 305 462 1.08e-11 67.4
MS.gene72659.t1 AT3G12690 26.224 286 178 9 42 315 189 453 1.02e-14 76.6
MS.gene72659.t1 AT3G12690 26.224 286 178 9 42 315 189 453 1.02e-14 76.6
MS.gene72659.t1 AT3G12690 26.224 286 178 9 42 315 189 453 1.02e-14 76.6
MS.gene72659.t1 AT3G25840 31.638 177 97 6 254 414 502 670 9.26e-14 73.9
MS.gene72659.t1 AT3G25840 29.651 172 102 5 11 177 337 494 1.35e-11 67.0
MS.gene72659.t1 AT1G13350 30.168 179 98 6 254 414 662 831 1.32e-13 73.6
MS.gene72659.t1 AT1G13350 30.814 172 100 5 11 177 497 654 2.63e-13 72.8
MS.gene72659.t1 AT1G13350 30.168 179 98 6 254 414 589 758 1.51e-13 73.6
MS.gene72659.t1 AT1G13350 30.814 172 100 5 11 177 424 581 1.93e-13 73.2
MS.gene72659.t1 AT1G13350 30.168 179 98 6 254 414 616 785 1.62e-13 73.2
MS.gene72659.t1 AT1G13350 30.814 172 100 5 11 177 451 608 2.17e-13 72.8
MS.gene72659.t1 AT3G25840 31.638 177 97 6 254 414 764 932 2.64e-13 72.8
MS.gene72659.t1 AT3G25840 29.651 172 102 5 11 177 599 756 1.41e-11 67.4
MS.gene72659.t1 AT2G36350 26.578 301 185 11 42 324 563 845 5.55e-12 68.6
MS.gene72659.t1 AT3G20830 23.469 294 189 10 40 320 23 293 4.70e-11 64.7

Find 112 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGCAAGATTGTCGATTT+TGG 0.222958 5.4:-15703561 MS.gene72659:CDS
ACCGGCATGGTGATCTAAAA+AGG 0.287476 5.4:-15702636 MS.gene72659:CDS
GGGGAGAGTCCGCATCTAAA+AGG 0.304647 5.4:+15703756 None:intergenic
ATAACCTTGTCCACCACCTT+TGG 0.312925 5.4:+15703377 None:intergenic
TGCATGGTCCTTGAGTTTCT+TGG 0.316560 5.4:-15703963 MS.gene72659:CDS
TAACCTTGTCCACCACCTTT+GGG 0.320820 5.4:+15703378 None:intergenic
GGGGTCAATTCTCCACCTTT+TGG 0.321013 5.4:-15705363 MS.gene72659:CDS
CCTCAGTCCGTTCTAAAGTT+GGG 0.329112 5.4:+15703736 None:intergenic
ATGTCTTGTTCTTCTTCATC+AGG 0.333473 5.4:-15705499 MS.gene72659:CDS
AGTTCAGCCAGGGGTGTTGC+AGG 0.337595 5.4:+15702470 None:intergenic
ACTTTCCTACCTTGATTTGA+AGG 0.337930 5.4:+15702377 None:intergenic
ATGCAATGGTGCTGCCCATT+TGG 0.353666 5.4:+15703981 None:intergenic
TCCGCATCTAAAAGGGTCTT+TGG 0.357534 5.4:+15703764 None:intergenic
TGGGAGTGTACTCACCTTCC+GGG 0.362905 5.4:+15702758 None:intergenic
AAGTGCAGCCGAGTTTGTTC+AGG 0.382307 5.4:-15704105 MS.gene72659:CDS
GCGTGCAGTTGCTAAAATAT+CGG 0.390478 5.4:-15703655 MS.gene72659:CDS
GATTCATTTCTCATTTCATT+TGG 0.391464 5.4:+15702433 None:intergenic
GCTTAAAGTTATCAATCAAT+TGG 0.393123 5.4:+15704012 None:intergenic
ATCTCTCTAACTTTATTCAA+TGG 0.394338 5.4:+15703894 None:intergenic
TGCTCAGAGGAAACTTGGTT+GGG 0.402208 5.4:-15705383 MS.gene72659:CDS
GATTACTTGCATAGTGAACT+TGG 0.411710 5.4:-15703846 MS.gene72659:CDS
CCCTCAGTCCGTTCTAAAGT+TGG 0.414075 5.4:+15703735 None:intergenic
TTTAAGCACACAGGTCCAAA+TGG 0.425606 5.4:-15703996 MS.gene72659:CDS
TGATTCATTGCAGTTCAGCC+AGG 0.429978 5.4:+15702459 None:intergenic
GGATCATCTTGCCTTGATGA+TGG 0.437810 5.4:-15702799 MS.gene72659:CDS
TTACAAGTCTTATTGAGAAA+AGG 0.437935 5.4:-15703695 MS.gene72659:CDS
TGTGGATTGCAGATTGCAAT+TGG 0.442014 5.4:-15702685 MS.gene72659:intron
AAATGAATCTACTGTGGAAA+AGG 0.456827 5.4:-15702419 MS.gene72659:CDS
TATATTGCTCAGAGGAAACT+TGG 0.462401 5.4:-15705388 MS.gene72659:CDS
ACAACAAACTTTGAATTCGA+TGG 0.467683 5.4:+15704035 None:intergenic
TTGTTCTTCTTCATCAGGAT+CGG 0.468336 5.4:-15705494 MS.gene72659:CDS
GGCAATACCTGCAACACCCC+TGG 0.477580 5.4:-15702477 MS.gene72659:CDS
TCAATGGAAGACCTTTGTAA+TGG 0.483257 5.4:+15703910 None:intergenic
CGTGCAGTTGCTAAAATATC+GGG 0.483843 5.4:-15703654 MS.gene72659:CDS
GGAAGAACAGCTTCAATTGA+AGG 0.486531 5.4:-15703633 MS.gene72659:CDS
CCTGAAGTTATACTGAAGTC+TGG 0.492577 5.4:-15703477 MS.gene72659:CDS
AACTCCTCGGAAAGATGCCC+CGG 0.493756 5.4:-15702776 MS.gene72659:CDS
TTGCTCAGAGGAAACTTGGT+TGG 0.496479 5.4:-15705384 MS.gene72659:CDS
TTCTTTCAACCATTGCTGAT+GGG 0.501024 5.4:-15704061 MS.gene72659:CDS
GATTCATTGCAGTTCAGCCA+GGG 0.507004 5.4:+15702460 None:intergenic
ATGCCGGTCAAAGTAATCCT+TGG 0.507357 5.4:+15702651 None:intergenic
CCAGACTTCAGTATAACTTC+AGG 0.509267 5.4:+15703477 None:intergenic
GTTCTTTCAACCATTGCTGA+TGG 0.515507 5.4:-15704062 MS.gene72659:CDS
GGGAGAGTCCGCATCTAAAA+GGG 0.516717 5.4:+15703757 None:intergenic
TCCGAGGAGTTCCATCATCA+AGG 0.521134 5.4:+15702788 None:intergenic
ACAGCTTCAATTGAAGGAAG+AGG 0.522518 5.4:-15703627 MS.gene72659:CDS
ATTGCTTTCGAGCTTGCCAC+TGG 0.524146 5.4:-15703417 MS.gene72659:CDS
CTCAGTCCGTTCTAAAGTTG+GGG 0.526561 5.4:+15703737 None:intergenic
TCTTTCAACCATTGCTGATG+GGG 0.528594 5.4:-15704060 MS.gene72659:CDS
AATCCAAGGATTACTTTGAC+CGG 0.528653 5.4:-15702654 MS.gene72659:CDS
TATGAGCAACCTTCAAATCA+AGG 0.531115 5.4:-15702386 MS.gene72659:CDS
CAACAAACTTTGAATTCGAT+GGG 0.538001 5.4:+15704036 None:intergenic
TTATTTACACCCAAAGGTGG+TGG 0.545111 5.4:-15703387 MS.gene72659:CDS
TGCAGGTATTGCCGTGCAGT+TGG 0.547161 5.4:+15702487 None:intergenic
GGATTGCAGATTGCAATTGG+TGG 0.549667 5.4:-15702682 MS.gene72659:intron
ATGAGGGATTTGAGTCCTAT+CGG 0.552054 5.4:-15705462 MS.gene72659:CDS
TTAAGCACACAGGTCCAAAT+GGG 0.558245 5.4:-15703995 MS.gene72659:CDS
TCAATCAGCAATTTGTCAAG+TGG 0.561218 5.4:+15702592 None:intergenic
CTGATCAATTCGCGGGTGGG+AGG 0.561858 5.4:-15705411 MS.gene72659:CDS
GATATGTTATTTACACCCAA+AGG 0.565138 5.4:-15703393 MS.gene72659:CDS
ACACCCAAAGGTGGTGGACA+AGG 0.567008 5.4:-15703381 MS.gene72659:CDS
TAGAGTCGCTGATCAATTCG+CGG 0.570049 5.4:-15705419 MS.gene72659:CDS
CCTTCCGGGGCATCTTTCCG+AGG 0.576947 5.4:+15702772 None:intergenic
CGATGGGTCCCCATCAGCAA+TGG 0.578011 5.4:+15704052 None:intergenic
ATCATAAGCAAGCCAAAAGG+TGG 0.578147 5.4:+15705351 None:intergenic
TTCTTCTTCATCAGGATCGG+AGG 0.578889 5.4:-15705491 MS.gene72659:CDS
ATTCCTTCTCTGTAGACATG+TGG 0.579312 5.4:-15703452 MS.gene72659:CDS
ACAAGGTTATAGCGAGGATG+AGG 0.579359 5.4:-15703364 MS.gene72659:intron
CATCTAAAAGGGTCTTTGGA+AGG 0.579508 5.4:+15703768 None:intergenic
AAGGATTACTTTGACCGGCA+TGG 0.580864 5.4:-15702649 MS.gene72659:CDS
ACTGTGGAAAAGGTTAATGT+TGG 0.582824 5.4:-15702409 MS.gene72659:CDS
ATCAAATACAGCCATTACAA+AGG 0.586492 5.4:-15703921 MS.gene72659:CDS
ATTCATTGCAGTTCAGCCAG+GGG 0.586651 5.4:+15702461 None:intergenic
AGTATCATAAGCAAGCCAAA+AGG 0.588387 5.4:+15705348 None:intergenic
AGGATCGGAGGAAGATGATG+AGG 0.592202 5.4:-15705479 MS.gene72659:CDS
GTCGCTGATCAATTCGCGGG+TGG 0.594980 5.4:-15705415 MS.gene72659:CDS
TCGCTGATCAATTCGCGGGT+GGG 0.599945 5.4:-15705414 MS.gene72659:CDS
ATTGATAACTTTAAGCACAC+AGG 0.601668 5.4:-15704005 MS.gene72659:CDS
TGTAAATAACATATCTCCAG+TGG 0.603326 5.4:+15703401 None:intergenic
CGGACTGAGGGAAACACAAA+CGG 0.603582 5.4:-15703723 MS.gene72659:CDS
TTTCAGGCTTTAAGTCTGTG+TGG 0.603818 5.4:+15703817 None:intergenic
AAATCAAGGTAGGAAAGTGA+AGG 0.604919 5.4:-15702372 None:intergenic
GCTCAGAGGAAACTTGGTTG+GGG 0.605080 5.4:-15705382 MS.gene72659:CDS
AATTGGTGGAGCTCAATCCA+AGG 0.608972 5.4:-15702668 MS.gene72659:CDS
ATGGTATCCACCTTTCCGAT+AGG 0.609356 5.4:+15705447 None:intergenic
AGACCACATGTCTACAGAGA+AGG 0.609410 5.4:+15703449 None:intergenic
AGTCTAGTAGAAATATCGAC+GGG 0.609550 5.4:-15703593 MS.gene72659:CDS
AAATGGGCAGCACCATTGCA+TGG 0.610699 5.4:-15703979 MS.gene72659:CDS
AGAGTCGCTGATCAATTCGC+GGG 0.611441 5.4:-15705418 MS.gene72659:CDS
TTTGAGTCCTATCGGAAAGG+TGG 0.621569 5.4:-15705454 MS.gene72659:CDS
AAGTCTAGTAGAAATATCGA+CGG 0.621748 5.4:-15703594 MS.gene72659:CDS
AAAGAACGTTGATCTCGTGA+AGG 0.622147 5.4:+15704078 None:intergenic
GGGAGTGTACTCACCTTCCG+GGG 0.625406 5.4:+15702759 None:intergenic
AAGAACGTTGATCTCGTGAA+GGG 0.630667 5.4:+15704079 None:intergenic
AAGGGCAGCCTGAACAAACT+CGG 0.632337 5.4:+15704097 None:intergenic
GAAACTCAAGGACCATGCAA+TGG 0.636117 5.4:+15703967 None:intergenic
CCCAACTTTAGAACGGACTG+AGG 0.637641 5.4:-15703736 MS.gene72659:CDS
AGCAACCTTCAAATCAAGGT+AGG 0.638879 5.4:-15702382 MS.gene72659:CDS
GACTCTCCCCAACTTTAGAA+CGG 0.639593 5.4:-15703743 MS.gene72659:CDS
ATGTTATTTACACCCAAAGG+TGG 0.642360 5.4:-15703390 MS.gene72659:CDS
CCTCGGAAAGATGCCCCGGA+AGG 0.647925 5.4:-15702772 MS.gene72659:intron
GGATTTGAGTCCTATCGGAA+AGG 0.650525 5.4:-15705457 MS.gene72659:CDS
AGCTATCACCAAGAAACTCA+AGG 0.651636 5.4:+15703955 None:intergenic
GGATCGGAGGAAGATGATGA+GGG 0.654053 5.4:-15705478 MS.gene72659:CDS
GCCTTGATGATGGAACTCCT+CGG 0.654637 5.4:-15702789 MS.gene72659:CDS
GATCAGCGACTCTAACAGCA+TGG 0.659062 5.4:+15705428 None:intergenic
ATAAGAAGAACATACAGAGG+TGG 0.667158 5.4:+15705324 None:intergenic
AATGAGAAATGAATCTACTG+TGG 0.670154 5.4:-15702425 MS.gene72659:CDS
CCAACTTTAGAACGGACTGA+GGG 0.670163 5.4:-15703735 MS.gene72659:CDS
ACTGAGGGAAACACAAACGG+TGG 0.700333 5.4:-15703720 MS.gene72659:CDS
TGGTGGACAAGGTTATAGCG+AGG 0.709203 5.4:-15703370 MS.gene72659:CDS
GTGGGAGGTATATTGCTCAG+AGG 0.720598 5.4:-15705396 MS.gene72659:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCAAAAATATTCTATAT+GGG - chr5.4:15703608-15703627 MS.gene72659:CDS 10.0%
!!! ATAATTTTAAAAATTATCAC+TGG + chr5.4:15703677-15703696 None:intergenic 10.0%
!!! CATATAATATAAGTTTTTAT+AGG + chr5.4:15705018-15705037 None:intergenic 10.0%
!! AAACTTATATTATATGTTAC+TGG - chr5.4:15705022-15705041 MS.gene72659:intron 15.0%
!! AAATTAGAAAAAGATATTAG+TGG + chr5.4:15703709-15703728 None:intergenic 15.0%
!! AATCATGAAAAACAAAAAAT+AGG + chr5.4:15702595-15702614 None:intergenic 15.0%
!! GATTTCAAAAATATTCTATA+TGG - chr5.4:15703607-15703626 MS.gene72659:CDS 15.0%
!!! ATTTGTAAATACATTTTGAT+TGG - chr5.4:15704001-15704020 MS.gene72659:CDS 15.0%
!!! CATTTCTAAAATAAATATTG+TGG - chr5.4:15705153-15705172 MS.gene72659:intron 15.0%
!!! TTTTTTTGTTATTGAATGAA+TGG - chr5.4:15702740-15702759 MS.gene72659:intron 15.0%
!! CATGATCATAAAAAGAATAA+AGG + chr5.4:15704934-15704953 None:intergenic 20.0%
!!! TAAATACATTTTGATTGGTT+TGG - chr5.4:15704006-15704025 MS.gene72659:CDS 20.0%
!!! TTTAAAAATTATCACTGGTT+GGG + chr5.4:15703672-15703691 None:intergenic 20.0%
!!! TTTTAAAAATTATCACTGGT+TGG + chr5.4:15703673-15703692 None:intergenic 20.0%
! AATTGGAATAGCTGAAAATT+GGG - chr5.4:15702846-15702865 MS.gene72659:intron 25.0%
! ACGTTAGAAACAAATACATT+TGG - chr5.4:15703157-15703176 MS.gene72659:intron 25.0%
! ATCTCTCTAACTTTATTCAA+TGG + chr5.4:15703983-15704002 None:intergenic 25.0%
! ATTAATAAAAAGAGACACAG+GGG - chr5.4:15704647-15704666 MS.gene72659:intron 25.0%
! ATTCCAATTCCAACAAAAAA+AGG + chr5.4:15702835-15702854 None:intergenic 25.0%
! ATTTGGTAGACATATTAGAA+TGG - chr5.4:15703174-15703193 MS.gene72659:intron 25.0%
! CATTAATAAAAAGAGACACA+GGG - chr5.4:15704646-15704665 MS.gene72659:intron 25.0%
! CCAACAAAAAAAGGAATTAT+CGG + chr5.4:15702826-15702845 None:intergenic 25.0%
! CTTCATTAACTTAATCAAGA+TGG - chr5.4:15703503-15703522 MS.gene72659:CDS 25.0%
! GACAAAAACAATGTAACATA+AGG + chr5.4:15702900-15702919 None:intergenic 25.0%
! GATTCATTTCTCATTTCATT+TGG + chr5.4:15705444-15705463 None:intergenic 25.0%
! GCTTAAAGTTATCAATCAAT+TGG + chr5.4:15703865-15703884 None:intergenic 25.0%
! GGTTTAATATGTGAAAAAAC+TGG - chr5.4:15704603-15704622 MS.gene72659:intron 25.0%
! TAGGTTTATTAGCTCAAATT+TGG - chr5.4:15702690-15702709 MS.gene72659:intron 25.0%
! TATTATGTTTGACCTATGTT+TGG - chr5.4:15703223-15703242 MS.gene72659:intron 25.0%
! TATTGGTGCAAATTAACAAA+CGG - chr5.4:15703360-15703379 MS.gene72659:intron 25.0%
! TTTGGTAGACATATTAGAAT+GGG - chr5.4:15703175-15703194 MS.gene72659:intron 25.0%
!! CTTTTTATGATCATGTTGAA+GGG - chr5.4:15704939-15704958 MS.gene72659:intron 25.0%
!! GAAAATAGAAGAATGTTTTC+AGG + chr5.4:15704076-15704095 None:intergenic 25.0%
!! TCTTTTTATGATCATGTTGA+AGG - chr5.4:15704938-15704957 MS.gene72659:intron 25.0%
!! TTTTTCATGATTTTCACATG+TGG - chr5.4:15702603-15702622 MS.gene72659:CDS 25.0%
!!! ATTCCTTTTTTTGTTGGAAT+TGG - chr5.4:15702829-15702848 MS.gene72659:intron 25.0%
!!! ATTTTTCTAGTAAACTGTTG+TGG - chr5.4:15704540-15704559 MS.gene72659:intron 25.0%
!!! GACAATTGGTTTGTTTTATT+TGG - chr5.4:15703456-15703475 MS.gene72659:CDS 25.0%
!!! TTACAAGTCTTATTGAGAAA+AGG - chr5.4:15704179-15704198 MS.gene72659:intron 25.0%
!!! TTGTTTGTTATGTTTTGTGT+AGG - chr5.4:15702671-15702690 MS.gene72659:CDS 25.0%
!!! TTTTTTTGCTGTCAAGATTT+AGG - chr5.4:15703057-15703076 MS.gene72659:intron 25.0%
AAACAATGTAACATAAGGTC+AGG + chr5.4:15702895-15702914 None:intergenic 30.0%
AAATGAATCTACTGTGGAAA+AGG - chr5.4:15705455-15705474 MS.gene72659:CDS 30.0%
AACACACATTGAACAAAAGA+AGG + chr5.4:15702790-15702809 None:intergenic 30.0%
AAGACAATTATTCTCATTCC+CGG + chr5.4:15703003-15703022 None:intergenic 30.0%
AAGACTTGTGATACCATAAA+TGG - chr5.4:15703097-15703116 MS.gene72659:intron 30.0%
AAGTCTAGTAGAAATATCGA+CGG - chr5.4:15704280-15704299 MS.gene72659:intron 30.0%
AATGAGAAATGAATCTACTG+TGG - chr5.4:15705449-15705468 MS.gene72659:CDS 30.0%
ACAACAAACTTTGAATTCGA+TGG + chr5.4:15703842-15703861 None:intergenic 30.0%
ACATGAAGAAAAGATGAACT+TGG + chr5.4:15703577-15703596 None:intergenic 30.0%
AGTATAAGAAGAACATACAG+AGG + chr5.4:15702556-15702575 None:intergenic 30.0%
ATATTAAAACAACAGTCTCC+TGG - chr5.4:15703530-15703549 MS.gene72659:CDS 30.0%
ATCAAATACAGCCATTACAA+AGG - chr5.4:15703953-15703972 MS.gene72659:CDS 30.0%
ATGGGATGAAACATAATACT+AGG - chr5.4:15703193-15703212 MS.gene72659:intron 30.0%
ATTGAAGTGTATCCAAACAT+AGG + chr5.4:15703238-15703257 None:intergenic 30.0%
ATTGGTGCAAATTAACAAAC+GGG - chr5.4:15703361-15703380 MS.gene72659:intron 30.0%
ATTTATGGTATCACAAGTCT+TGG + chr5.4:15703098-15703117 None:intergenic 30.0%
CAACAAACTTTGAATTCGAT+GGG + chr5.4:15703841-15703860 None:intergenic 30.0%
CATGTACCATTTATGTTTGT+TGG - chr5.4:15702972-15702991 MS.gene72659:intron 30.0%
CCATTAATAAAAAGAGACAC+AGG - chr5.4:15704645-15704664 MS.gene72659:intron 30.0%
GAATTGGAATAGCTGAAAAT+TGG - chr5.4:15702845-15702864 MS.gene72659:intron 30.0%
GGATATTAATCTTAGCAACA+GGG + chr5.4:15703556-15703575 None:intergenic 30.0%
GTACTAAATAATATGTGTCC+TGG - chr5.4:15704886-15704905 MS.gene72659:intron 30.0%
GTACTTCCAACAAACATAAA+TGG + chr5.4:15702981-15703000 None:intergenic 30.0%
TACATGTACATGTGTTAGAT+TGG + chr5.4:15702958-15702977 None:intergenic 30.0%
TAGGTTCTATAGAAATAGCA+TGG + chr5.4:15704999-15705018 None:intergenic 30.0%
TGAGAATAATTGTCTTTCTC+AGG - chr5.4:15703007-15703026 MS.gene72659:intron 30.0%
TGGATATTAATCTTAGCAAC+AGG + chr5.4:15703557-15703576 None:intergenic 30.0%
TGGGATGAAACATAATACTA+GGG - chr5.4:15703194-15703213 MS.gene72659:intron 30.0%
TGTAAATAACATATCTCCAG+TGG + chr5.4:15704476-15704495 None:intergenic 30.0%
TTGTAGCTTCTCAAAAATCA+CGG + chr5.4:15703283-15703302 None:intergenic 30.0%
! AATATATATAGCCTTTTGCC+AGG + chr5.4:15704907-15704926 None:intergenic 30.0%
! ATTGATAACTTTAAGCACAC+AGG - chr5.4:15703869-15703888 MS.gene72659:CDS 30.0%
! CCTGTGTCTCTTTTTATTAA+TGG + chr5.4:15704648-15704667 None:intergenic 30.0%
! GATATGTTATTTACACCCAA+AGG - chr5.4:15704481-15704500 MS.gene72659:intron 30.0%
! TATGGTTAATGAGTTTTCAG+AGG - chr5.4:15704582-15704601 MS.gene72659:intron 30.0%
! TTTATGTTTGTTGGAAGTAC+CGG - chr5.4:15702981-15703000 MS.gene72659:intron 30.0%
!! AAGATTTAGGAGCCATTTTA+TGG - chr5.4:15703070-15703089 MS.gene72659:intron 30.0%
!!! AGGAGACTGTTGTTTTAATA+TGG + chr5.4:15703531-15703550 None:intergenic 30.0%
!!! CCGATAATTCCTTTTTTTGT+TGG - chr5.4:15702823-15702842 MS.gene72659:intron 30.0%
AAATGAAACATGCTGACAGT+GGG + chr5.4:15705138-15705157 None:intergenic 35.0%
AATCCAAGGATTACTTTGAC+CGG - chr5.4:15705220-15705239 MS.gene72659:intron 35.0%
ACTGTGGAAAAGGTTAATGT+TGG - chr5.4:15705465-15705484 MS.gene72659:CDS 35.0%
AGAGAACAAAACAGGACAAT+TGG - chr5.4:15703442-15703461 MS.gene72659:CDS 35.0%
AGTATCATAAGCAAGCCAAA+AGG + chr5.4:15702529-15702548 None:intergenic 35.0%
AGTCTAGTAGAAATATCGAC+GGG - chr5.4:15704281-15704300 MS.gene72659:intron 35.0%
ATAAGAAGAACATACAGAGG+TGG + chr5.4:15702553-15702572 None:intergenic 35.0%
ATAATATGTGTCCTGGCAAA+AGG - chr5.4:15704893-15704912 MS.gene72659:intron 35.0%
CAAGTCTTGGATCCATAAAA+TGG + chr5.4:15703085-15703104 None:intergenic 35.0%
GAATAGCTGAAAATTGGGAA+TGG - chr5.4:15702851-15702870 MS.gene72659:intron 35.0%
GATGAAACATAATACTAGGG+GGG - chr5.4:15703197-15703216 MS.gene72659:intron 35.0%
GATTACTTGCATAGTGAACT+TGG - chr5.4:15704028-15704047 MS.gene72659:CDS 35.0%
GGATGAAACATAATACTAGG+GGG - chr5.4:15703196-15703215 MS.gene72659:intron 35.0%
GGGATGAAACATAATACTAG+GGG - chr5.4:15703195-15703214 MS.gene72659:intron 35.0%
GTGATCTAAAAAGGATTCGT+AGG - chr5.4:15705247-15705266 MS.gene72659:intron 35.0%
TAAATGGCACGAGTTAATGT+AGG - chr5.4:15703113-15703132 MS.gene72659:intron 35.0%
TATATTGCTCAGAGGAAACT+TGG - chr5.4:15702486-15702505 MS.gene72659:CDS 35.0%
TATGAGCAACCTTCAAATCA+AGG - chr5.4:15705488-15705507 MS.gene72659:CDS 35.0%
TCAATCAGCAATTTGTCAAG+TGG + chr5.4:15705285-15705304 None:intergenic 35.0%
TCAATGGAAGACCTTTGTAA+TGG + chr5.4:15703967-15703986 None:intergenic 35.0%
TGATCATGTTGAAGGGAAAA+TGG - chr5.4:15704946-15704965 MS.gene72659:intron 35.0%
TTCTTTCAACCATTGCTGAT+GGG - chr5.4:15703813-15703832 MS.gene72659:CDS 35.0%
TTGTTCTTCTTCATCAGGAT+CGG - chr5.4:15702380-15702399 MS.gene72659:CDS 35.0%
! ACTTTCCTACCTTGATTTGA+AGG + chr5.4:15705500-15705519 None:intergenic 35.0%
! ATGTCTTGTTCTTCTTCATC+AGG - chr5.4:15702375-15702394 MS.gene72659:CDS 35.0%
! ATGTTATTTACACCCAAAGG+TGG - chr5.4:15704484-15704503 MS.gene72659:intron 35.0%
! ATTCTTTTATAGCCCATGTG+AGG - chr5.4:15704860-15704879 MS.gene72659:intron 35.0%
! GAGTGAAAGTGTAAAACAAG+TGG - chr5.4:15703389-15703408 MS.gene72659:CDS 35.0%
! TTCTTTTATAGCCCATGTGA+GGG - chr5.4:15704861-15704880 MS.gene72659:intron 35.0%
!! ACATTAACTCGTGCCATTTA+TGG + chr5.4:15703113-15703132 None:intergenic 35.0%
!! TACAACTTGTAGCTTTGAAG+TGG - chr5.4:15703298-15703317 MS.gene72659:intron 35.0%
!! TGATAGTGTGAAAAGTGTCA+GGG - chr5.4:15704796-15704815 MS.gene72659:intron 35.0%
!! TTATGTTTGTTGGAAGTACC+GGG - chr5.4:15702982-15703001 MS.gene72659:intron 35.0%
!! TTGATAGTGTGAAAAGTGTC+AGG - chr5.4:15704795-15704814 MS.gene72659:intron 35.0%
!! TTGTCCTGTTTTGTTCTCTT+TGG + chr5.4:15703441-15703460 None:intergenic 35.0%
!!! AGATGCAAGATTGTCGATTT+TGG - chr5.4:15704313-15704332 MS.gene72659:intron 35.0%
AAAGAACGTTGATCTCGTGA+AGG + chr5.4:15703799-15703818 None:intergenic 40.0%
AAGAACGTTGATCTCGTGAA+GGG + chr5.4:15703798-15703817 None:intergenic 40.0%
ACAGCTTCAATTGAAGGAAG+AGG - chr5.4:15704247-15704266 MS.gene72659:intron 40.0%
AGCAACCTTCAAATCAAGGT+AGG - chr5.4:15705492-15705511 MS.gene72659:CDS 40.0%
AGCTATCACCAAGAAACTCA+AGG + chr5.4:15703922-15703941 None:intergenic 40.0%
ATCATAAGCAAGCCAAAAGG+TGG + chr5.4:15702526-15702545 None:intergenic 40.0%
ATGAGGGATTTGAGTCCTAT+CGG - chr5.4:15702412-15702431 MS.gene72659:CDS 40.0%
ATGATCCTGAAATCAGCACA+AGG + chr5.4:15705062-15705081 None:intergenic 40.0%
ATTCCTTCTCTGTAGACATG+TGG - chr5.4:15704422-15704441 MS.gene72659:intron 40.0%
ATTTAGTACCTCCCTCACAT+GGG + chr5.4:15704875-15704894 None:intergenic 40.0%
CATCTAAAAGGGTCTTTGGA+AGG + chr5.4:15704109-15704128 None:intergenic 40.0%
CCAGACTTCAGTATAACTTC+AGG + chr5.4:15704400-15704419 None:intergenic 40.0%
CCTGAAGTTATACTGAAGTC+TGG - chr5.4:15704397-15704416 MS.gene72659:intron 40.0%
CGAACCAAAGAGAACAAAAC+AGG - chr5.4:15703434-15703453 MS.gene72659:CDS 40.0%
CGTGCAGTTGCTAAAATATC+GGG - chr5.4:15704220-15704239 MS.gene72659:intron 40.0%
GAAATGAAACATGCTGACAG+TGG + chr5.4:15705139-15705158 None:intergenic 40.0%
GCGTGCAGTTGCTAAAATAT+CGG - chr5.4:15704219-15704238 MS.gene72659:intron 40.0%
GGAAGAACAGCTTCAATTGA+AGG - chr5.4:15704241-15704260 MS.gene72659:intron 40.0%
GTTCTTTCAACCATTGCTGA+TGG - chr5.4:15703812-15703831 MS.gene72659:CDS 40.0%
TATTTAGTACCTCCCTCACA+TGG + chr5.4:15704876-15704895 None:intergenic 40.0%
TCTGGCGCAAAATCAAAAAG+TGG + chr5.4:15705360-15705379 None:intergenic 40.0%
TCTTTCAACCATTGCTGATG+GGG - chr5.4:15703814-15703833 MS.gene72659:CDS 40.0%
TGTGGCATATCTAATGCTTG+TGG - chr5.4:15705171-15705190 MS.gene72659:intron 40.0%
TTAAGCACACAGGTCCAAAT+GGG - chr5.4:15703879-15703898 MS.gene72659:CDS 40.0%
TTATTTACACCCAAAGGTGG+TGG - chr5.4:15704487-15704506 MS.gene72659:intron 40.0%
TTTAAGCACACAGGTCCAAA+TGG - chr5.4:15703878-15703897 MS.gene72659:CDS 40.0%
! CTTTGGTTCGATATTCTCAG+TGG + chr5.4:15703424-15703443 None:intergenic 40.0%
! TCCAAAGACCCTTTTAGATG+CGG - chr5.4:15704109-15704128 MS.gene72659:CDS 40.0%
! TCCTTTTTAGATCACCATGC+CGG + chr5.4:15705242-15705261 None:intergenic 40.0%
! TGTGGATTGCAGATTGCAAT+TGG - chr5.4:15705189-15705208 MS.gene72659:intron 40.0%
!! AATGTCCTTGTGCTGATTTC+AGG - chr5.4:15705054-15705073 MS.gene72659:intron 40.0%
!! CGATTTTGGAAATGCGTGTT+GGG - chr5.4:15704327-15704346 MS.gene72659:intron 40.0%
!! GTCAGGTTTTGTGAATTGTG+AGG + chr5.4:15702878-15702897 None:intergenic 40.0%
!! TCGATTTTGGAAATGCGTGT+TGG - chr5.4:15704326-15704345 MS.gene72659:intron 40.0%
!! TTTCAGGCTTTAAGTCTGTG+TGG + chr5.4:15704060-15704079 None:intergenic 40.0%
AAGGATTACTTTGACCGGCA+TGG - chr5.4:15705225-15705244 MS.gene72659:intron 45.0%
AATTGGTGGAGCTCAATCCA+AGG - chr5.4:15705206-15705225 MS.gene72659:intron 45.0%
ACAAGGTTATAGCGAGGATG+AGG - chr5.4:15704510-15704529 MS.gene72659:intron 45.0%
ACCGGCATGGTGATCTAAAA+AGG - chr5.4:15705238-15705257 MS.gene72659:intron 45.0%
AGACCACATGTCTACAGAGA+AGG + chr5.4:15704428-15704447 None:intergenic 45.0%
ATAACCTTGTCCACCACCTT+TGG + chr5.4:15704500-15704519 None:intergenic 45.0%
ATGCCGGTCAAAGTAATCCT+TGG + chr5.4:15705226-15705245 None:intergenic 45.0%
ATGGTATCCACCTTTCCGAT+AGG + chr5.4:15702430-15702449 None:intergenic 45.0%
ATTCATTGCAGTTCAGCCAG+GGG + chr5.4:15705416-15705435 None:intergenic 45.0%
CAATAGCCTGTTTGTGTCTG+TGG + chr5.4:15703345-15703364 None:intergenic 45.0%
CACAGACACAAACAGGCTAT+TGG - chr5.4:15703343-15703362 MS.gene72659:intron 45.0%
CAGAAAAACGACCAACTGCA+CGG - chr5.4:15705376-15705395 MS.gene72659:CDS 45.0%
GAAACTCAAGGACCATGCAA+TGG + chr5.4:15703910-15703929 None:intergenic 45.0%
GATTCATTGCAGTTCAGCCA+GGG + chr5.4:15705417-15705436 None:intergenic 45.0%
GGATCATCTTGCCTTGATGA+TGG - chr5.4:15705075-15705094 MS.gene72659:intron 45.0%
GGATTGCAGATTGCAATTGG+TGG - chr5.4:15705192-15705211 MS.gene72659:intron 45.0%
GGATTTGAGTCCTATCGGAA+AGG - chr5.4:15702417-15702436 MS.gene72659:CDS 45.0%
TAACCTTGTCCACCACCTTT+GGG + chr5.4:15704499-15704518 None:intergenic 45.0%
TAGAGTCGCTGATCAATTCG+CGG - chr5.4:15702455-15702474 MS.gene72659:CDS 45.0%
TCCGCATCTAAAAGGGTCTT+TGG + chr5.4:15704113-15704132 None:intergenic 45.0%
TGATTCATTGCAGTTCAGCC+AGG + chr5.4:15705418-15705437 None:intergenic 45.0%
TGCATGGTCCTTGAGTTTCT+TGG - chr5.4:15703911-15703930 MS.gene72659:CDS 45.0%
TGCTCAGAGGAAACTTGGTT+GGG - chr5.4:15702491-15702510 MS.gene72659:CDS 45.0%
TTAATCTTAGCAACAGGGCC+AGG + chr5.4:15703551-15703570 None:intergenic 45.0%
TTCTTCTTCATCAGGATCGG+AGG - chr5.4:15702383-15702402 MS.gene72659:CDS 45.0%
TTGCTCAGAGGAAACTTGGT+TGG - chr5.4:15702490-15702509 MS.gene72659:CDS 45.0%
TTTGAGTCCTATCGGAAAGG+TGG - chr5.4:15702420-15702439 MS.gene72659:CDS 45.0%
! GACTCTCCCCAACTTTAGAA+CGG - chr5.4:15704131-15704150 MS.gene72659:CDS 45.0%
! TTTTATAGCCCATGTGAGGG+AGG - chr5.4:15704864-15704883 MS.gene72659:intron 45.0%
!! CCAACTTTAGAACGGACTGA+GGG - chr5.4:15704139-15704158 MS.gene72659:intron 45.0%
!! CCTCAGTCCGTTCTAAAGTT+GGG + chr5.4:15704141-15704160 None:intergenic 45.0%
!! CTCAGTCCGTTCTAAAGTTG+GGG + chr5.4:15704140-15704159 None:intergenic 45.0%
!!! TTAAATTTGATTTAATAATA+TGG - chr5.4:15704564-15704583 MS.gene72659:intron 5.0%
AAATCACGGCCAACTTGCGT+TGG + chr5.4:15703269-15703288 None:intergenic 50.0%
AAATGGGCAGCACCATTGCA+TGG - chr5.4:15703895-15703914 MS.gene72659:CDS 50.0%
AAGGGCAGCCTGAACAAACT+CGG + chr5.4:15703780-15703799 None:intergenic 50.0%
AATCACGGCCAACTTGCGTT+GGG + chr5.4:15703268-15703287 None:intergenic 50.0%
ACTGAGGGAAACACAAACGG+TGG - chr5.4:15704154-15704173 MS.gene72659:intron 50.0%
AGAGTCGCTGATCAATTCGC+GGG - chr5.4:15702456-15702475 MS.gene72659:CDS 50.0%
AGCCTGTTTGTGTCTGTGGT+GGG + chr5.4:15703341-15703360 None:intergenic 50.0%
AGGATCGGAGGAAGATGATG+AGG - chr5.4:15702395-15702414 MS.gene72659:CDS 50.0%
ATTGCTTTCGAGCTTGCCAC+TGG - chr5.4:15704457-15704476 MS.gene72659:intron 50.0%
CGGACTGAGGGAAACACAAA+CGG - chr5.4:15704151-15704170 MS.gene72659:intron 50.0%
GATCAGCGACTCTAACAGCA+TGG + chr5.4:15702449-15702468 None:intergenic 50.0%
GCTCAGAGGAAACTTGGTTG+GGG - chr5.4:15702492-15702511 MS.gene72659:CDS 50.0%
GGATCGGAGGAAGATGATGA+GGG - chr5.4:15702396-15702415 MS.gene72659:CDS 50.0%
GGGAGAGTCCGCATCTAAAA+GGG + chr5.4:15704120-15704139 None:intergenic 50.0%
TACCACATCCCAACGCAAGT+TGG - chr5.4:15703257-15703276 MS.gene72659:intron 50.0%
TAGCCTGTTTGTGTCTGTGG+TGG + chr5.4:15703342-15703361 None:intergenic 50.0%
TCCGAGGAGTTCCATCATCA+AGG + chr5.4:15705089-15705108 None:intergenic 50.0%
! AAGTGCAGCCGAGTTTGTTC+AGG - chr5.4:15703769-15703788 MS.gene72659:CDS 50.0%
! CAAACTCGGCTGCACTTTTC+TGG + chr5.4:15703766-15703785 None:intergenic 50.0%
! GGGGTCAATTCTCCACCTTT+TGG - chr5.4:15702511-15702530 MS.gene72659:CDS 50.0%
! GTGGGAGGTATATTGCTCAG+AGG - chr5.4:15702478-15702497 MS.gene72659:CDS 50.0%
! TGGTGGACAAGGTTATAGCG+AGG - chr5.4:15704504-15704523 MS.gene72659:intron 50.0%
!! ATGCAATGGTGCTGCCCATT+TGG + chr5.4:15703896-15703915 None:intergenic 50.0%
!! CCCAACTTTAGAACGGACTG+AGG - chr5.4:15704138-15704157 MS.gene72659:intron 50.0%
!! CCCTCAGTCCGTTCTAAAGT+TGG + chr5.4:15704142-15704161 None:intergenic 50.0%
!! GCCTTGATGATGGAACTCCT+CGG - chr5.4:15705085-15705104 MS.gene72659:intron 50.0%
!!! CGTGCAGTTGGTCGTTTTTC+TGG + chr5.4:15705378-15705397 None:intergenic 50.0%
AACTCCTCGGAAAGATGCCC+CGG - chr5.4:15705098-15705117 MS.gene72659:intron 55.0%
CTCCCACCACAGACACAAAC+AGG - chr5.4:15703336-15703355 MS.gene72659:intron 55.0%
GGGGAGAGTCCGCATCTAAA+AGG + chr5.4:15704121-15704140 None:intergenic 55.0%
TCGCTGATCAATTCGCGGGT+GGG - chr5.4:15702460-15702479 MS.gene72659:CDS 55.0%
! CTGTTTGTGTCTGTGGTGGG+AGG + chr5.4:15703338-15703357 None:intergenic 55.0%
! GTGGGAGTGTACTCACCTTC+CGG + chr5.4:15705120-15705139 None:intergenic 55.0%
! TGCAGGTATTGCCGTGCAGT+TGG + chr5.4:15705390-15705409 None:intergenic 55.0%
! TGGGAGTGTACTCACCTTCC+GGG + chr5.4:15705119-15705138 None:intergenic 55.0%
!! ACACCCAAAGGTGGTGGACA+AGG - chr5.4:15704493-15704512 MS.gene72659:intron 55.0%
CGATGGGTCCCCATCAGCAA+TGG + chr5.4:15703825-15703844 None:intergenic 60.0%
CTGATCAATTCGCGGGTGGG+AGG - chr5.4:15702463-15702482 MS.gene72659:CDS 60.0%
GGCAATACCTGCAACACCCC+TGG - chr5.4:15705397-15705416 MS.gene72659:CDS 60.0%
GGCCAACTTGCGTTGGGATG+TGG + chr5.4:15703262-15703281 None:intergenic 60.0%
GTCGCTGATCAATTCGCGGG+TGG - chr5.4:15702459-15702478 MS.gene72659:CDS 60.0%
! GGGAGTGTACTCACCTTCCG+GGG + chr5.4:15705118-15705137 None:intergenic 60.0%
!! AGTTCAGCCAGGGGTGTTGC+AGG + chr5.4:15705407-15705426 None:intergenic 60.0%
CCTCGGAAAGATGCCCCGGA+AGG - chr5.4:15705102-15705121 MS.gene72659:intron 65.0%
! CCTTCCGGGGCATCTTTCCG+AGG + chr5.4:15705105-15705124 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 15702375 15705521 15702375 ID=MS.gene72659
chr5.4 mRNA 15702375 15705521 15702375 ID=MS.gene72659.t1;Parent=MS.gene72659
chr5.4 exon 15705339 15705521 15705339 ID=MS.gene72659.t1.exon1;Parent=MS.gene72659.t1
chr5.4 CDS 15705339 15705521 15705339 ID=cds.MS.gene72659.t1;Parent=MS.gene72659.t1
chr5.4 exon 15703365 15704153 15703365 ID=MS.gene72659.t1.exon2;Parent=MS.gene72659.t1
chr5.4 CDS 15703365 15704153 15703365 ID=cds.MS.gene72659.t1;Parent=MS.gene72659.t1
chr5.4 exon 15702773 15702820 15702773 ID=MS.gene72659.t1.exon3;Parent=MS.gene72659.t1
chr5.4 CDS 15702773 15702820 15702773 ID=cds.MS.gene72659.t1;Parent=MS.gene72659.t1
chr5.4 exon 15702375 15702695 15702375 ID=MS.gene72659.t1.exon4;Parent=MS.gene72659.t1
chr5.4 CDS 15702375 15702695 15702375 ID=cds.MS.gene72659.t1;Parent=MS.gene72659.t1
Gene Sequence

>MS.gene72659

ATGTCTTGTTCTTCTTCATCAGGATCGGAGGAAGATGATGAGGGATTTGAGTCCTATCGGAAAGGTGGATACCATGCTGTTAGAGTCGCTGATCAATTCGCGGGTGGGAGGTATATTGCTCAGAGGAAACTTGGTTGGGGTCAATTCTCCACCTTTTGGCTTGCTTATGATACTACCACCTCTGTATGTTCTTCTTATACTTTTGTTTTCAATTCAACCTATTTTTTGTTTTTCATGATTTTCACATGTGGTTCATGTTTTAGATTTGAAAGTTTTTTTCTTTGTTTTGTTTATGATTGTTTGTTATGTTTTGTGTAGGTTTATTAGCTCAAATTTGGTTGATTTGTTTGTTTAATGATGTTTTTTTTTTTTGTTATTGAATGAATGGATCTAATTCAGATTTTTTTTTCTTCCTTCTTTTGTTCAATGTGTGTTACAATTACAAATTCCGATAATTCCTTTTTTTGTTGGAATTGGAATAGCTGAAAATTGGGAATGGTCCTCACAATTCACAAAACCTGACCTTATGTTACATTGTTTTTGTCTTTATGTACAAAAGCAATAAATGTGTCTTTTATATCCAATCTAACACATGTACATGTACCATTTATGTTTGTTGGAAGTACCGGGAATGAGAATAATTGTCTTTCTCAGGTTAATTTTTGATTCAGTAGTTTTTTTGTTTTTTTGCTGTCAAGATTTAGGAGCCATTTTATGGATCCAAGACTTGTGATACCATAAATGGCACGAGTTAATGTAGGATCTTTCTAGTGTTTGAATTGACGTTAGAAACAAATACATTTGGTAGACATATTAGAATGGGATGAAACATAATACTAGGGGGGCTATATTATGTTTGACCTATGTTTGGATACACTTCAATACCACATCCCAACGCAAGTTGGCCGTGATTTTTGAGAAGCTACAACTTGTAGCTTTGAAGTGGATGCGAGTTTAACTCCTCCCACCACAGACACAAACAGGCTATTGGTGCAAATTAACAAACGGGACACAGAGTGAAAGTGTAAAACAAGTGGTACTCAATTCCACTGAGAATATCGAACCAAAGAGAACAAAACAGGACAATTGGTTTGTTTTATTTGGTTGCTATGTGTTACTTACATCACTCTTCATTAACTTAATCAAGATGGTTCCATATTAAAACAACAGTCTCCTGGCCCTGTTGCTAAGATTAATATCCAAGTTCATCTTTTCTTCATGTATTTATGTTTGATTTCAAAAATATTCTATATGGGTAAACAATTATGAGTGTGCATGTATTGCTTTGTGTTTGCCCAACCAGTGATAATTTTTAAAATTATTTTTGCGCACCACTAATATCTTTTTCTAATTTCTTGTTTTTTTCAGTCATATGTTGCTCTCAAAATCCAGAAAAGTGCAGCCGAGTTTGTTCAGGCTGCCCTTCACGAGATCAACGTTCTTTCAACCATTGCTGATGGGGACCCATCGAATTCAAAGTTTGTTGTCCAATTGATTGATAACTTTAAGCACACAGGTCCAAATGGGCAGCACCATTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGTTTGATCAAATACAGCCATTACAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGTAAATACATTTTGATTGGTTTGGATTACTTGCATAGTGAACTTGGTATAATCCACACAGACTTAAAGCCTGAAAACATTCTTCTATTTTCAACTATTGATCCTTCCAAAGACCCTTTTAGATGCGGACTCTCCCCAACTTTAGAACGGACTGAGGGAAACACAAACGGTGGACTTACAAGTCTTATTGAGAAAAGGCTGAAGAGAAGAGCAAAGCGTGCAGTTGCTAAAATATCGGGAAGAACAGCTTCAATTGAAGGAAGAGGAGAAGCTGCAAAGTCTAGTAGAAATATCGACGGGATTGATGTGAGATGCAAGATTGTCGATTTTGGAAATGCGTGTTGGGCTGATAACAAGTTTGCAGAAGAAATACAGACAAGACAATATAGAGCTCCTGAAGTTATACTGAAGTCTGGTTATTCCTTCTCTGTAGACATGTGGTCTTTTGCTTGCATTGCTTTCGAGCTTGCCACTGGAGATATGTTATTTACACCCAAAGGTGGTGGACAAGGTTATAGCGAGGATGAGGTATGCTGATTTTTCTAGTAAACTGTTGTGGTTTAAATTTGATTTAATAATATGGTTAATGAGTTTTCAGAGGTTTAATATGTGAAAAAACTGGTTTAATTAGCTCAATTACACCATTAATAAAAAGAGACACAGGGGCATATTTCATTGAATCAGCTTGTAATACTAATGCATAATATGCATTAGTTTAAATGTCTGATTAGTTTACAAACTTTCTACATGTTTTGATATGTACATTTTCATTTTTACTTAAGAAAATAGTTTTGATAGTGTGAAAAGTGTCAGGGATATCAGATTTTACTTCTATTCACTGTTTTATATATTTATGATTCTTTTATAGCCCATGTGAGGGAGGTACTAAATAATATGTGTCCTGGCAAAAGGCTATATATATTGTATCCTTTATTCTTTTTATGATCATGTTGAAGGGAAAATGGTCAAGATATATTTGTTTGCATTGAGTTCCATGCTATTTCTATAGAACCTATAAAAACTTATATTATATGTTACTGGAATAATAAAAATGTCCTTGTGCTGATTTCAGGATCATCTTGCCTTGATGATGGAACTCCTCGGAAAGATGCCCCGGAAGGTGAGTACACTCCCACTGTCAGCATGTTTCATTTCTAAAATAAATATTGTGGCATATCTAATGCTTGTGGATTGCAGATTGCAATTGGTGGAGCTCAATCCAAGGATTACTTTGACCGGCATGGTGATCTAAAAAGGATTCGTAGGCTAAAATTTTGTCCACTTGACAAATTGCTGATTGATAGATATAAATTTTCAGCGAATGATGCTCAAGAGTTTTCAGAATTTCTTTTGCCACTTTTTGATTTTGCGCCAGAAAAACGACCAACTGCACGGCAATACCTGCAACACCCCTGGCTGAACTGCAATGAATCAGCGCCAAATGAAATGAGAAATGAATCTACTGTGGAAAAGGTTAATGTTGGTATGAGCAACCTTCAAATCAAGGTAGGAAAGTGA
Protein sequence

>MS.gene72659.t1

MSCSSSSGSEEDDEGFESYRKGGYHAVRVADQFAGGRYIAQRKLGWGQFSTFWLAYDTTTSSYVALKIQKSAAEFVQAALHEINVLSTIADGDPSNSKFVVQLIDNFKHTGPNGQHHCMVLEFLGDSLLRLIKYSHYKGLPLNKVREICKYILIGLDYLHSELGIIHTDLKPENILLFSTIDPSKDPFRCGLSPTLERTEGNTNGGLTSLIEKRLKRRAKRAVAKISGRTASIEGRGEAAKSSRNIDGIDVRCKIVDFGNACWADNKFAEEIQTRQYRAPEVILKSGYSFSVDMWSFACIAFELATGDMLFTPKGGGQGYSEDEDHLALMMELLGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFCPLDKLLIDRYKFSANDAQEFSEFLLPLFDFAPEKRPTARQYLQHPWLNCNESAPNEMRNESTVEKVNVGMSNLQIKVGK