AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53503

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53503.t1 MTR_8g089420 93.333 465 13 7 1 456 1 456 0.0 842
MS.gene53503.t1 MTR_2g018990 73.876 467 97 10 1 455 1 454 0.0 657
MS.gene53503.t1 MTR_4g113790 51.768 396 167 6 54 426 66 460 8.78e-139 407
MS.gene53503.t1 MTR_2g027240 51.282 390 163 8 54 423 179 561 3.55e-132 394
MS.gene53503.t1 MTR_1g060790 50.521 384 169 7 54 423 445 821 2.36e-128 392
MS.gene53503.t1 MTR_3g010260 50.000 390 170 8 54 426 390 771 7.53e-125 382
MS.gene53503.t1 MTR_8g006870 50.781 384 166 7 54 422 345 720 1.79e-124 380
MS.gene53503.t1 MTR_6g004720 50.000 386 167 6 54 423 226 601 1.47e-123 373
MS.gene53503.t1 MTR_7g081665 47.700 413 188 7 54 446 339 743 5.70e-123 375
MS.gene53503.t1 MTR_7g033640 49.744 390 169 7 54 423 207 589 5.93e-123 371
MS.gene53503.t1 MTR_7g104180 46.763 417 200 8 54 455 467 876 9.77e-123 378
MS.gene53503.t1 MTR_2g062850 47.938 388 180 5 50 423 141 520 1.86e-121 365
MS.gene53503.t1 MTR_2g069990 49.598 373 168 7 54 424 67 421 9.22e-120 358
MS.gene53503.t1 MTR_8g446990 48.446 386 177 8 53 423 105 483 5.78e-116 350
MS.gene53503.t1 MTR_2g085065 47.594 374 174 7 58 415 66 433 1.42e-107 327
MS.gene53503.t1 MTR_8g070530 43.636 385 175 8 42 423 560 905 1.56e-100 321
MS.gene53503.t1 MTR_2g095980 41.192 369 187 6 54 422 346 684 2.21e-88 284
MS.gene53503.t1 MTR_2g095980 41.192 369 187 6 54 422 601 939 1.25e-86 285
MS.gene53503.t1 MTR_2g095980 41.192 369 187 6 54 422 601 939 1.53e-86 285
MS.gene53503.t1 MTR_4g061610 40.483 373 170 9 54 422 619 943 5.91e-81 270
MS.gene53503.t1 MTR_4g065080 37.221 403 214 11 77 456 10 396 8.16e-74 238
MS.gene53503.t1 MTR_8g011780 38.122 362 202 8 73 423 11 361 8.45e-73 236
MS.gene53503.t1 MTR_7g053200 35.171 381 215 9 75 436 6 373 6.97e-70 228
MS.gene53503.t1 MTR_2g098240 36.857 350 190 8 77 423 12 333 7.71e-70 226
MS.gene53503.t1 MTR_6g470940 32.908 392 218 8 60 446 855 1206 1.37e-52 191
MS.gene53503.t1 MTR_4g035835 34.421 337 185 8 74 410 751 1051 2.20e-50 184
MS.gene53503.t1 MTR_5g069000 34.125 337 186 8 74 410 755 1055 2.90e-50 184
MS.gene53503.t1 MTR_7g073520 30.226 354 172 8 77 424 143 427 8.28e-46 166
MS.gene53503.t1 MTR_1g075880 32.277 347 203 11 81 422 116 435 2.71e-45 165
MS.gene53503.t1 MTR_1g069735 31.161 353 213 10 73 423 111 435 7.77e-45 163
MS.gene53503.t1 MTR_1g069735 31.161 353 213 10 73 423 111 435 1.39e-44 162
MS.gene53503.t1 MTR_1g069735 31.161 353 213 10 73 423 111 435 3.49e-44 163
MS.gene53503.t1 MTR_1g090917 31.139 395 201 10 56 445 32 360 1.06e-43 160
MS.gene53503.t1 MTR_7g097150 29.873 395 234 13 61 444 97 459 1.36e-43 160
MS.gene53503.t1 MTR_1g090917 32.000 375 184 10 56 425 32 340 6.88e-43 158
MS.gene53503.t1 MTR_3g104700 31.034 348 201 11 73 409 85 404 7.49e-42 155
MS.gene53503.t1 MTR_2g040150 31.412 347 201 11 73 409 104 423 1.63e-41 155
MS.gene53503.t1 MTR_1g019340 29.243 383 235 13 44 423 76 425 3.94e-41 152
MS.gene53503.t1 MTR_1g019340 29.243 383 235 13 44 423 76 425 1.57e-40 152
MS.gene53503.t1 MTR_1g442790 30.226 354 219 10 72 423 100 427 5.32e-40 151
MS.gene53503.t1 MTR_1g442790 30.226 354 219 10 72 423 100 427 6.38e-40 150
MS.gene53503.t1 MTR_1g042700 29.775 356 217 11 72 423 105 431 9.60e-40 150
MS.gene53503.t1 MTR_3g104700 29.863 365 200 12 73 409 85 421 1.54e-38 147
MS.gene53503.t1 MTR_1g090917 32.180 289 135 8 160 443 1 233 9.23e-29 116
MS.gene53503.t1 MTR_1g090917 31.399 293 134 8 160 450 1 228 4.22e-28 115
MS.gene53503.t1 MTR_2g020380 28.746 327 160 8 82 407 4 258 4.09e-26 112
MS.gene53503.t1 MTR_4g107280 35.897 156 94 2 81 232 88 241 1.06e-24 106
MS.gene53503.t1 MTR_4g107280 41.739 115 61 2 297 410 247 356 4.30e-21 95.5
MS.gene53503.t1 MTR_4g029020 26.796 362 185 12 71 424 1 290 1.32e-24 106
MS.gene53503.t1 MTR_8g040300 29.154 319 155 10 78 395 6 254 3.32e-24 102
MS.gene53503.t1 MTR_3g099920 26.437 348 169 11 79 420 16 282 1.55e-22 100
MS.gene53503.t1 MTR_4g131060 28.302 318 160 8 75 391 11 261 8.71e-22 97.8
MS.gene53503.t1 MTR_5g088350 27.653 311 158 10 82 391 13 257 1.69e-21 95.5
MS.gene53503.t1 MTR_5g088350 27.653 311 158 10 82 391 13 257 2.11e-21 96.7
MS.gene53503.t1 MTR_7g072575 27.761 335 170 11 74 407 4 267 2.44e-21 96.7
MS.gene53503.t1 MTR_4g107280 41.739 115 61 2 297 410 208 317 4.30e-21 95.1
MS.gene53503.t1 MTR_4g107280 30.128 156 64 4 81 232 88 202 3.20e-14 74.3
MS.gene53503.t1 MTR_2g049790 26.606 327 169 9 82 407 23 279 4.92e-21 95.5
MS.gene53503.t1 MTR_5g088350 27.653 311 158 10 82 391 13 257 5.15e-21 95.5
MS.gene53503.t1 MTR_4g006970 23.894 339 186 9 70 407 8 275 9.22e-21 94.7
MS.gene53503.t1 MTR_1g096490 27.245 323 154 13 79 391 26 277 4.98e-20 92.8
MS.gene53503.t1 MTR_8g095440 26.471 340 166 11 82 412 30 294 5.58e-20 92.0
MS.gene53503.t1 MTR_8g095440 26.471 340 166 11 82 412 30 294 2.02e-19 91.3
MS.gene53503.t1 MTR_3g466400 26.444 329 166 10 82 407 14 269 4.30e-19 89.7
MS.gene53503.t1 MTR_3g098090 27.900 319 150 12 82 391 32 279 6.50e-19 89.4
MS.gene53503.t1 MTR_6g006770 27.485 342 171 14 73 407 7 278 8.59e-19 89.7
MS.gene53503.t1 MTR_1g076370 24.765 319 159 9 82 391 20 266 9.12e-19 88.6
MS.gene53503.t1 MTR_1g103760 24.776 335 175 11 86 416 16 277 2.72e-18 87.4
MS.gene53503.t1 MTR_6g012990 25.073 343 180 10 79 420 16 282 3.46e-18 86.3
MS.gene53503.t1 MTR_8g086380 26.198 313 160 9 82 391 26 270 3.55e-18 87.4
MS.gene53503.t1 MTR_6g012990 25.073 343 180 10 79 420 16 282 5.09e-18 86.7
MS.gene53503.t1 MTR_2g045470 24.038 312 168 8 82 391 20 264 8.19e-18 85.9
MS.gene53503.t1 MTR_3g072320 23.839 323 176 6 74 395 4 257 1.33e-17 85.1
MS.gene53503.t1 MTR_6g048250 24.620 329 174 9 79 406 16 271 1.83e-17 84.0
MS.gene53503.t1 MTR_6g048250 24.620 329 174 9 79 406 16 271 2.21e-17 84.3
MS.gene53503.t1 MTR_3g088715 39.252 107 56 3 302 407 28 126 2.76e-17 78.6
MS.gene53503.t1 MTR_6g048250 24.620 329 174 9 79 406 16 271 3.05e-17 84.3
MS.gene53503.t1 MTR_2g016340 24.375 320 172 9 74 391 4 255 3.63e-17 84.0
MS.gene53503.t1 MTR_4g005730 27.778 342 152 14 82 407 24 286 4.20e-17 84.3
MS.gene53503.t1 MTR_4g005730 27.778 342 152 14 82 407 24 286 4.45e-17 84.3
MS.gene53503.t1 MTR_4g005730 27.778 342 152 14 82 407 24 286 4.86e-17 84.3
MS.gene53503.t1 MTR_5g067150 32.895 152 95 4 82 232 9 154 1.73e-16 81.6
MS.gene53503.t1 MTR_5g099240 26.708 322 159 13 78 391 91 343 1.99e-16 82.0
MS.gene53503.t1 MTR_5g067150 32.895 152 95 4 82 232 9 154 2.05e-16 81.3
MS.gene53503.t1 MTR_5g067150 32.895 152 95 4 82 232 9 154 2.16e-16 80.9
MS.gene53503.t1 MTR_5g099240 26.708 322 159 13 78 391 19 271 2.31e-16 81.6
MS.gene53503.t1 MTR_3g051770 25.065 383 186 17 44 410 49 346 3.06e-16 81.3
MS.gene53503.t1 MTR_8g035890 26.543 324 161 10 72 391 6 256 3.40e-16 79.0
MS.gene53503.t1 MTR_1g081000 23.642 313 171 8 79 390 1 246 4.13e-16 81.3
MS.gene53503.t1 MTR_1g081000 23.642 313 171 8 79 390 1 246 4.90e-16 80.9
MS.gene53503.t1 MTR_4g128820 33.113 151 96 2 82 232 10 155 6.34e-16 80.1
MS.gene53503.t1 MTR_7g095450 23.003 313 173 9 79 390 1 246 7.89e-16 80.5
MS.gene53503.t1 MTR_6g087000 34.884 129 73 4 299 422 912 1034 2.33e-15 79.3
MS.gene53503.t1 MTR_2g105010 23.438 320 177 8 73 391 5 257 8.81e-15 76.6
MS.gene53503.t1 MTR_4g114670 23.853 327 176 11 82 407 11 265 2.08e-14 75.1
MS.gene53503.t1 MTR_3g110405 28.333 180 123 3 54 233 10 183 2.45e-14 73.9
MS.gene53503.t1 MTR_3g110405 40.426 94 51 2 299 391 188 277 9.13e-14 72.0
MS.gene53503.t1 MTR_4g114670 23.853 327 176 11 82 407 11 265 2.77e-14 75.1
MS.gene53503.t1 MTR_4g123940 25.449 334 175 11 82 412 26 288 4.50e-14 73.6
MS.gene53503.t1 MTR_8g024590 30.519 154 102 3 82 235 17 165 5.91e-14 73.9
MS.gene53503.t1 MTR_3g466480 30.000 160 106 3 79 238 18 171 6.78e-14 73.9
MS.gene53503.t1 MTR_4g123940 25.449 334 175 11 82 412 26 288 7.29e-14 73.6
MS.gene53503.t1 MTR_1g101630 27.119 177 119 5 61 232 19 190 8.21e-14 73.9
MS.gene53503.t1 MTR_5g045190 21.713 327 184 9 82 407 239 494 8.71e-14 74.3
MS.gene53503.t1 MTR_1g080020 31.544 149 95 3 82 229 9 151 1.02e-13 71.6
MS.gene53503.t1 MTR_1g040875 23.585 318 162 9 82 391 24 268 1.05e-13 73.2
MS.gene53503.t1 MTR_8g024600 29.870 154 103 3 82 235 17 165 1.41e-13 72.8
MS.gene53503.t1 MTR_3g099767 30.526 190 119 4 45 233 75 252 1.62e-13 72.8
MS.gene53503.t1 MTR_7g116390 31.875 160 97 5 74 229 8 159 2.54e-13 70.9
MS.gene53503.t1 MTR_3g095620 34.211 152 85 5 87 232 30 172 3.24e-13 70.5
MS.gene53503.t1 MTR_4g019410 29.448 163 102 5 81 239 18 171 4.75e-13 71.6
MS.gene53503.t1 MTR_7g113490 31.293 147 97 2 88 232 74 218 4.77e-13 71.6
MS.gene53503.t1 MTR_4g019410 29.448 163 102 5 81 239 18 171 6.73e-13 71.2
MS.gene53503.t1 MTR_2g013900 28.205 156 94 4 118 273 211 348 9.81e-13 70.5
MS.gene53503.t1 MTR_5g075060 26.875 160 107 3 75 232 5 156 2.40e-12 68.9
MS.gene53503.t1 MTR_1g105290 32.215 149 93 3 88 232 61 205 3.00e-12 69.3
MS.gene53503.t1 MTR_1g105290 32.215 149 93 3 88 232 61 205 4.14e-12 68.6
MS.gene53503.t1 MTR_1g048630 32.237 152 96 5 78 229 3 147 4.65e-12 68.9
MS.gene53503.t1 MTR_4g051648 25.658 152 108 3 82 232 8 155 5.43e-12 68.6
MS.gene53503.t1 MTR_1g105290 32.215 149 93 3 88 232 61 205 5.65e-12 68.2
MS.gene53503.t1 MTR_4g088755 33.333 105 69 1 133 237 90 193 6.75e-12 67.0
MS.gene53503.t1 MTR_4g088745 33.333 105 69 1 133 237 95 198 7.08e-12 67.0
MS.gene53503.t1 MTR_3g034100 23.121 173 130 2 60 232 61 230 1.38e-11 66.2
MS.gene53503.t1 MTR_7g092360 25.161 155 111 3 79 232 13 163 1.49e-11 67.0
MS.gene53503.t1 MTR_8g024100 29.710 138 91 3 81 218 14 145 1.51e-11 67.0
MS.gene53503.t1 MTR_5g075100 29.814 161 106 4 79 238 20 174 1.55e-11 66.6
MS.gene53503.t1 MTR_2g100030 31.373 153 97 3 82 232 18 164 3.70e-11 65.5
MS.gene53503.t1 MTR_4g088750 26.950 141 99 2 133 273 251 387 7.81e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53503.t1 AT2G34650 64.924 459 124 10 8 455 6 438 0.0 582
MS.gene53503.t1 AT5G47750 50.360 417 175 9 54 451 164 567 1.11e-133 398
MS.gene53503.t1 AT2G26700 46.570 481 186 11 7 423 9 482 8.66e-133 393
MS.gene53503.t1 AT4G26610 48.675 415 177 7 24 423 80 473 3.10e-131 389
MS.gene53503.t1 AT5G40030 47.087 412 196 7 54 453 86 487 8.37e-131 387
MS.gene53503.t1 AT5G55910 50.129 389 168 8 54 423 82 463 3.98e-129 383
MS.gene53503.t1 AT5G55910 50.129 389 168 8 54 423 82 463 3.98e-129 383
MS.gene53503.t1 AT3G52890 49.752 404 151 10 54 423 511 896 8.63e-122 377
MS.gene53503.t1 AT3G52890 49.752 404 151 10 54 423 511 896 8.63e-122 377
MS.gene53503.t1 AT3G52890 49.752 404 151 10 54 423 511 896 8.63e-122 377
MS.gene53503.t1 AT3G52890 49.752 404 151 10 54 423 511 896 8.63e-122 377
MS.gene53503.t1 AT1G79250 46.682 422 178 9 54 443 119 525 3.74e-121 365
MS.gene53503.t1 AT1G79250 46.682 422 178 9 54 443 119 525 3.74e-121 365
MS.gene53503.t1 AT1G79250 46.682 422 178 9 54 443 119 525 3.74e-121 365
MS.gene53503.t1 AT1G79250 46.682 422 178 9 54 443 119 525 3.74e-121 365
MS.gene53503.t1 AT3G12690 46.875 416 192 9 47 445 151 554 1.97e-120 363
MS.gene53503.t1 AT3G12690 46.875 416 192 9 47 445 151 554 1.97e-120 363
MS.gene53503.t1 AT3G12690 46.875 416 192 9 47 445 151 554 1.97e-120 363
MS.gene53503.t1 AT5G03640 45.833 432 200 9 14 423 476 895 2.14e-120 373
MS.gene53503.t1 AT5G03640 45.833 432 200 9 14 423 476 895 2.14e-120 373
MS.gene53503.t1 AT3G27580 48.267 404 184 9 52 436 151 548 1.74e-119 361
MS.gene53503.t1 AT3G27580 48.267 404 184 9 52 436 151 548 1.74e-119 361
MS.gene53503.t1 AT1G16440 48.533 375 181 5 54 423 86 453 1.97e-118 356
MS.gene53503.t1 AT2G36350 47.132 401 164 7 54 423 532 915 3.28e-118 368
MS.gene53503.t1 AT2G44830 47.529 425 183 11 54 451 336 747 5.13e-118 363
MS.gene53503.t1 AT2G44830 47.529 425 183 11 54 451 336 747 5.13e-118 363
MS.gene53503.t1 AT2G44830 47.529 425 183 11 54 451 336 747 5.13e-118 363
MS.gene53503.t1 AT1G53700 48.257 373 175 7 56 427 66 421 4.91e-114 343
MS.gene53503.t1 AT3G14370 47.297 370 172 6 56 421 61 411 5.25e-110 333
MS.gene53503.t1 AT3G44610 47.486 358 148 9 87 414 74 421 9.00e-103 314
MS.gene53503.t1 AT5G58140 42.896 366 171 6 55 420 551 878 9.40e-98 313
MS.gene53503.t1 AT5G58140 42.896 366 171 6 55 420 551 878 9.40e-98 313
MS.gene53503.t1 AT5G58140 42.896 366 171 6 55 420 551 878 9.40e-98 313
MS.gene53503.t1 AT5G58140 42.896 366 171 6 55 420 551 878 9.40e-98 313
MS.gene53503.t1 AT5G58140 42.896 366 171 6 55 420 551 878 9.40e-98 313
MS.gene53503.t1 AT5G58140 42.936 361 168 6 55 415 551 873 1.49e-95 307
MS.gene53503.t1 AT3G45780 41.734 369 179 7 54 422 636 968 3.39e-86 284
MS.gene53503.t1 AT3G45780 41.734 369 179 7 54 422 636 968 3.39e-86 284
MS.gene53503.t1 AT1G51170 39.118 363 184 11 77 423 17 358 2.62e-69 226
MS.gene53503.t1 AT3G25250 36.188 362 200 10 72 423 7 347 2.10e-68 224
MS.gene53503.t1 AT3G20830 38.068 352 189 8 85 423 24 359 6.54e-65 214
MS.gene53503.t1 AT4G13000 35.127 353 200 8 76 424 14 341 1.37e-61 205
MS.gene53503.t1 AT1G48490 33.158 380 213 7 60 439 807 1145 6.54e-53 192
MS.gene53503.t1 AT1G48490 33.158 380 213 7 60 439 806 1144 6.79e-53 192
MS.gene53503.t1 AT1G48490 33.158 380 213 7 60 439 806 1144 6.79e-53 192
MS.gene53503.t1 AT1G48490 33.158 380 213 7 60 439 806 1144 6.79e-53 192
MS.gene53503.t1 AT3G17850 32.987 385 221 8 60 443 860 1208 5.13e-52 189
MS.gene53503.t1 AT5G62310 32.692 364 207 9 72 434 744 1070 2.08e-50 184
MS.gene53503.t1 AT1G45160 33.154 371 209 8 74 444 662 993 1.20e-49 182
MS.gene53503.t1 AT1G45160 33.154 371 209 8 74 444 662 993 1.59e-49 182
MS.gene53503.t1 AT3G08720 32.676 355 165 9 75 428 133 414 6.09e-49 174
MS.gene53503.t1 AT3G08720 32.676 355 165 9 75 428 133 414 6.09e-49 174
MS.gene53503.t1 AT3G08720 32.676 355 165 9 75 428 133 414 6.09e-49 174
MS.gene53503.t1 AT3G08720 32.676 355 165 9 75 428 133 414 6.09e-49 174
MS.gene53503.t1 AT3G10540 30.978 368 186 9 57 422 27 328 9.47e-49 174
MS.gene53503.t1 AT3G08730 31.250 368 177 11 65 426 117 414 2.32e-48 172
MS.gene53503.t1 AT3G08730 31.250 368 177 11 65 426 117 414 2.32e-48 172
MS.gene53503.t1 AT5G04510 30.933 375 197 10 51 422 12 327 7.67e-47 167
MS.gene53503.t1 AT5G04510 30.933 375 197 10 51 422 12 327 3.20e-46 167
MS.gene53503.t1 AT4G33080 31.805 349 198 11 73 409 85 405 4.83e-46 167
MS.gene53503.t1 AT4G33080 31.805 349 198 11 73 409 85 405 5.49e-46 167
MS.gene53503.t1 AT1G30640 30.986 355 216 11 73 423 18 347 5.07e-42 155
MS.gene53503.t1 AT4G14350 30.508 354 217 10 72 423 109 435 6.86e-42 156
MS.gene53503.t1 AT4G14350 30.508 354 217 10 72 423 109 435 7.42e-42 156
MS.gene53503.t1 AT4G14350 30.508 354 217 10 72 423 109 435 7.42e-42 156
MS.gene53503.t1 AT4G14350 30.508 354 217 10 72 423 109 435 7.42e-42 156
MS.gene53503.t1 AT1G30640 30.986 355 216 11 73 423 111 440 1.63e-41 155
MS.gene53503.t1 AT1G30640 30.986 355 216 11 73 423 111 440 1.63e-41 155
MS.gene53503.t1 AT3G23310 30.337 356 217 11 72 423 110 438 4.66e-41 154
MS.gene53503.t1 AT2G20470 31.844 358 203 10 73 423 115 438 4.67e-41 154
MS.gene53503.t1 AT2G20470 31.844 358 203 10 73 423 115 438 6.81e-41 154
MS.gene53503.t1 AT2G20470 31.844 358 203 10 73 423 115 438 6.81e-41 154
MS.gene53503.t1 AT2G19400 31.897 348 198 11 74 409 97 417 8.70e-41 153
MS.gene53503.t1 AT1G03920 31.594 345 206 10 81 423 23 339 1.58e-40 151
MS.gene53503.t1 AT5G09890 32.749 342 196 13 72 408 94 406 4.94e-40 150
MS.gene53503.t1 AT1G03920 31.594 345 206 10 81 423 136 452 5.05e-40 151
MS.gene53503.t1 AT1G03920 31.594 345 206 10 81 423 136 452 5.05e-40 151
MS.gene53503.t1 AT5G09890 32.749 342 196 13 72 408 94 406 5.26e-40 150
MS.gene53503.t1 AT5G04510 30.746 335 171 9 51 383 12 287 4.62e-38 140
MS.gene53503.t1 AT2G25880 26.727 333 173 6 61 392 17 279 3.64e-24 102
MS.gene53503.t1 AT2G25880 27.215 316 159 6 78 392 82 327 1.02e-23 102
MS.gene53503.t1 AT2G45490 28.947 304 145 10 81 383 21 254 1.07e-23 100
MS.gene53503.t1 AT5G58140 37.037 135 81 2 55 189 551 681 4.42e-23 102
MS.gene53503.t1 AT2G25090 27.640 322 170 9 73 391 6 267 1.66e-22 100
MS.gene53503.t1 AT1G30270 26.606 327 169 9 82 407 31 287 1.07e-21 97.8
MS.gene53503.t1 AT1G30270 26.606 327 169 9 82 407 31 287 1.13e-21 97.8
MS.gene53503.t1 AT3G53930 26.866 335 172 12 61 391 1 266 1.50e-21 98.2
MS.gene53503.t1 AT5G18700 37.013 154 86 3 79 232 1 143 1.50e-21 98.6
MS.gene53503.t1 AT3G53930 26.866 335 172 12 61 391 1 266 1.53e-21 98.2
MS.gene53503.t1 AT2G45490 27.812 320 150 11 78 391 18 262 1.71e-21 94.7
MS.gene53503.t1 AT5G57630 25.080 311 162 8 82 391 12 252 2.41e-21 96.3
MS.gene53503.t1 AT4G24400 27.134 328 162 11 82 406 9 262 3.00e-21 95.9
MS.gene53503.t1 AT3G10660 25.843 356 183 12 46 391 149 433 3.20e-21 97.1
MS.gene53503.t1 AT3G10660 25.843 356 183 12 46 391 149 433 3.20e-21 97.1
MS.gene53503.t1 AT4G24400 27.134 328 162 11 82 406 9 262 4.18e-21 95.9
MS.gene53503.t1 AT5G45810 28.136 295 145 8 75 364 21 253 7.50e-21 95.5
MS.gene53503.t1 AT5G25110 26.899 316 163 9 77 391 38 286 8.43e-21 95.1
MS.gene53503.t1 AT5G57630 25.080 311 162 9 82 391 12 252 1.61e-20 94.0
MS.gene53503.t1 AT5G10930 27.673 318 159 10 77 391 7 256 2.11e-20 93.6
MS.gene53503.t1 AT4G29810 26.286 350 171 10 77 412 65 341 3.50e-20 92.0
MS.gene53503.t1 AT3G23000 26.048 334 162 12 82 407 25 281 3.94e-20 92.8
MS.gene53503.t1 AT4G29810 26.286 350 171 10 77 412 74 350 4.35e-20 92.0
MS.gene53503.t1 AT1G54510 23.810 357 193 10 79 427 1 286 6.00e-20 93.2
MS.gene53503.t1 AT1G54510 23.810 357 193 10 79 427 1 286 6.00e-20 93.2
MS.gene53503.t1 AT1G54510 23.810 357 193 10 79 427 1 286 6.00e-20 93.2
MS.gene53503.t1 AT1G54510 23.810 357 193 10 79 427 1 286 6.00e-20 93.2
MS.gene53503.t1 AT4G18700 27.245 323 157 9 75 391 19 269 7.54e-20 92.4
MS.gene53503.t1 AT5G39440 26.102 295 148 7 112 406 46 270 1.66e-19 91.3
MS.gene53503.t1 AT4G35310 27.143 350 174 14 78 419 92 368 2.72e-19 90.9
MS.gene53503.t1 AT4G35310 27.143 350 174 14 78 419 92 368 2.72e-19 90.9
MS.gene53503.t1 AT5G01810 25.519 337 178 10 72 407 3 267 2.99e-19 89.7
MS.gene53503.t1 AT5G01810 25.519 337 178 10 72 407 3 267 3.03e-19 90.1
MS.gene53503.t1 AT5G01810 25.519 337 178 10 72 407 3 267 3.03e-19 90.1
MS.gene53503.t1 AT2G20050 35.714 126 74 2 291 414 926 1046 4.74e-19 90.9
MS.gene53503.t1 AT2G20050 37.288 118 67 2 299 414 931 1043 4.95e-19 90.9
MS.gene53503.t1 AT3G63280 24.383 324 177 7 68 390 44 300 5.81e-19 90.1
MS.gene53503.t1 AT3G29160 25.402 311 160 9 112 421 47 286 5.82e-19 88.6
MS.gene53503.t1 AT3G17510 26.074 326 164 10 72 391 10 264 6.03e-19 89.4
MS.gene53503.t1 AT3G01090 24.924 329 173 9 81 408 18 273 6.08e-19 89.7
MS.gene53503.t1 AT3G01090 24.924 329 173 9 81 408 18 273 6.08e-19 89.7
MS.gene53503.t1 AT3G01090 24.924 329 173 9 81 408 41 296 6.18e-19 89.7
MS.gene53503.t1 AT5G45820 25.545 321 169 9 73 391 3 255 1.13e-18 88.6
MS.gene53503.t1 AT4G29810 25.915 328 165 8 77 395 74 332 1.18e-18 87.4
MS.gene53503.t1 AT3G29160 25.402 311 160 9 112 421 47 286 1.56e-18 88.6
MS.gene53503.t1 AT3G29160 25.402 311 160 9 112 421 47 286 1.56e-18 88.6
MS.gene53503.t1 AT4G14580 25.938 320 153 11 82 391 21 266 3.03e-18 87.0
MS.gene53503.t1 AT3G04810 24.290 317 164 11 79 390 1 246 8.52e-18 86.7
MS.gene53503.t1 AT3G04810 24.290 317 164 11 79 390 1 246 8.52e-18 86.7
MS.gene53503.t1 AT3G04810 24.290 317 164 11 79 390 1 246 8.52e-18 86.7
MS.gene53503.t1 AT5G28290 24.601 313 162 10 82 390 4 246 1.06e-17 86.3
MS.gene53503.t1 AT5G28290 24.601 313 162 10 82 390 4 246 1.06e-17 86.3
MS.gene53503.t1 AT5G28290 24.601 313 162 10 82 390 4 246 1.24e-17 85.9
MS.gene53503.t1 AT2G17290 26.857 350 175 14 78 419 80 356 1.57e-17 85.5
MS.gene53503.t1 AT2G17290 26.857 350 175 14 78 419 80 356 1.57e-17 85.5
MS.gene53503.t1 AT1G48260 26.421 299 150 9 111 407 37 267 1.93e-17 84.7
MS.gene53503.t1 AT1G12680 33.117 154 90 4 81 233 106 247 6.02e-17 83.6
MS.gene53503.t1 AT5G14720 26.531 343 175 14 72 407 6 278 1.56e-16 82.8
MS.gene53503.t1 AT5G14720 26.531 343 175 14 72 407 6 278 1.56e-16 82.8
MS.gene53503.t1 AT5G21326 32.099 162 96 4 86 238 8 164 3.37e-16 80.9
MS.gene53503.t1 AT2G26980 30.058 173 116 3 66 238 8 175 7.23e-16 80.1
MS.gene53503.t1 AT2G26980 31.847 157 102 3 82 238 14 165 1.04e-15 77.4
MS.gene53503.t1 AT2G26980 31.847 157 102 3 82 238 14 165 1.32e-15 79.0
MS.gene53503.t1 AT2G26980 31.847 157 102 3 82 238 14 165 1.35e-15 78.6
MS.gene53503.t1 AT2G26980 31.847 157 102 3 82 238 14 165 2.74e-15 78.2
MS.gene53503.t1 AT1G29230 30.573 157 103 2 82 238 74 224 3.42e-15 78.2
MS.gene53503.t1 AT5G35410 31.579 152 97 3 82 232 11 156 3.89e-15 77.4
MS.gene53503.t1 AT1G70430 26.409 337 162 12 77 407 11 267 4.72e-15 77.8
MS.gene53503.t1 AT1G70430 26.409 337 162 12 77 407 11 267 5.13e-15 77.8
MS.gene53503.t1 AT1G70430 26.409 337 162 12 77 407 11 267 5.26e-15 77.8
MS.gene53503.t1 AT5G35410 31.579 152 97 3 82 232 11 156 7.23e-15 77.0
MS.gene53503.t1 AT4G30960 26.045 311 162 9 82 391 24 267 7.90e-15 76.6
MS.gene53503.t1 AT2G34180 28.485 165 112 2 74 238 49 207 1.07e-14 76.6
MS.gene53503.t1 AT5G24430 24.118 340 182 9 82 414 143 413 1.40e-14 76.6
MS.gene53503.t1 AT2G25880 42.105 95 50 2 299 392 144 234 1.47e-14 73.9
MS.gene53503.t1 AT3G61960 31.293 147 95 3 74 220 2 142 1.82e-14 76.3
MS.gene53503.t1 AT1G23700 26.562 320 156 10 77 390 11 257 1.95e-14 75.1
MS.gene53503.t1 AT3G61960 31.293 147 95 3 74 220 2 142 1.98e-14 75.9
MS.gene53503.t1 AT1G73500 31.169 154 94 4 81 232 46 189 2.10e-14 74.3
MS.gene53503.t1 AT2G25880 42.105 95 50 2 299 392 176 266 2.18e-14 73.9
MS.gene53503.t1 AT2G25880 30.128 156 104 2 78 233 21 171 1.41e-12 68.6
MS.gene53503.t1 AT1G23700 26.019 319 159 10 77 390 11 257 2.82e-14 75.1
MS.gene53503.t1 AT1G23700 26.875 320 155 12 77 390 11 257 2.83e-14 75.1
MS.gene53503.t1 AT1G54960 32.544 169 103 5 68 232 57 218 4.55e-14 75.1
MS.gene53503.t1 AT1G54960 32.544 169 103 5 68 232 57 218 4.55e-14 75.1
MS.gene53503.t1 AT5G07070 25.369 339 179 11 75 411 6 272 5.57e-14 74.3
MS.gene53503.t1 AT3G49370 24.927 341 178 10 82 414 142 412 5.83e-14 74.7
MS.gene53503.t1 AT1G32320 29.412 187 119 4 48 232 12 187 7.70e-14 72.4
MS.gene53503.t1 AT1G35670 32.716 162 95 6 79 233 22 176 1.45e-13 73.2
MS.gene53503.t1 AT4G32660 25.485 361 196 13 38 376 19 328 2.32e-13 71.6
MS.gene53503.t1 AT4G32660 26.316 361 193 13 38 376 19 328 2.33e-13 72.0
MS.gene53503.t1 AT4G32830 40.426 94 51 2 299 391 182 271 2.35e-13 70.9
MS.gene53503.t1 AT4G32830 30.128 156 104 2 78 233 27 177 3.99e-13 70.1
MS.gene53503.t1 AT4G14480 32.680 153 95 3 82 232 15 161 2.79e-13 72.0
MS.gene53503.t1 AT4G32660 25.485 361 196 13 38 376 11 320 2.83e-13 71.6
MS.gene53503.t1 AT1G01140 28.070 171 114 3 72 238 5 170 5.26e-13 71.2
MS.gene53503.t1 AT1G09000 34.228 149 90 4 88 232 75 219 5.34e-13 71.6
MS.gene53503.t1 AT1G09000 34.228 149 90 4 88 232 75 219 5.42e-13 71.6
MS.gene53503.t1 AT4G09570 33.540 161 95 6 79 233 21 175 5.46e-13 71.2
MS.gene53503.t1 AT1G01140 28.070 171 114 3 72 238 5 170 5.49e-13 71.2
MS.gene53503.t1 AT3G06030 31.293 147 97 2 88 232 74 218 5.63e-13 71.6
MS.gene53503.t1 AT1G01140 27.848 158 109 2 81 238 18 170 5.72e-13 70.9
MS.gene53503.t1 AT2G30360 30.488 164 102 4 79 238 18 173 1.65e-12 69.7
MS.gene53503.t1 AT2G46700 29.231 195 116 7 46 232 116 296 2.14e-12 69.7
MS.gene53503.t1 AT1G50240 32.026 153 97 5 77 229 1 146 2.78e-12 69.7
MS.gene53503.t1 AT1G50240 35.556 90 53 1 302 391 161 245 9.24e-11 65.1
MS.gene53503.t1 AT1G50240 32.026 153 97 5 77 229 1 146 2.78e-12 69.7
MS.gene53503.t1 AT1G50240 35.556 90 53 1 302 391 161 245 9.24e-11 65.1
MS.gene53503.t1 AT5G58950 31.206 141 79 4 95 232 232 357 4.43e-12 68.6
MS.gene53503.t1 AT5G21222 31.405 121 79 2 112 231 40 157 6.64e-12 68.2
MS.gene53503.t1 AT5G21222 31.405 121 79 2 112 231 40 157 6.64e-12 68.2
MS.gene53503.t1 AT5G21222 31.405 121 79 2 112 231 40 157 6.64e-12 68.2
MS.gene53503.t1 AT5G21222 31.405 121 79 2 112 231 40 157 6.64e-12 68.2
MS.gene53503.t1 AT1G18350 28.750 160 102 4 75 232 38 187 9.76e-12 66.2
MS.gene53503.t1 AT3G44200 25.658 152 108 3 82 232 8 155 1.58e-11 67.4
MS.gene53503.t1 AT3G44200 25.658 152 108 3 82 232 8 155 1.58e-11 67.4
MS.gene53503.t1 AT3G04530 30.275 109 71 2 302 410 170 273 1.80e-11 65.1
MS.gene53503.t1 AT1G08650 34.783 92 59 1 304 395 176 266 1.86e-11 65.1
MS.gene53503.t1 AT1G08650 34.783 92 59 1 304 395 176 266 1.88e-11 65.1
MS.gene53503.t1 AT1G53570 27.397 146 101 4 88 232 220 361 2.70e-11 66.2
MS.gene53503.t1 AT1G53570 27.397 146 101 4 88 232 220 361 2.77e-11 66.2
MS.gene53503.t1 AT1G53570 27.397 146 101 4 88 232 220 361 2.77e-11 66.2
MS.gene53503.t1 AT1G53570 27.397 146 101 4 88 232 220 361 2.79e-11 66.2
MS.gene53503.t1 AT1G53570 27.397 146 101 4 88 232 220 361 2.90e-11 65.9
MS.gene53503.t1 AT1G53570 27.397 146 101 4 88 232 220 361 2.93e-11 65.9
MS.gene53503.t1 AT5G57565 36.538 104 50 3 153 247 18 114 3.40e-11 61.2
MS.gene53503.t1 AT5G57565 36.538 104 50 3 153 247 18 114 3.40e-11 61.2
MS.gene53503.t1 AT4G32660 25.407 307 130 9 152 407 27 285 7.34e-11 63.5
MS.gene53503.t1 AT2G38490 31.325 166 105 5 74 238 21 178 8.55e-11 64.3

Find 116 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGTTGCCGTGGGAGTTTC+CGG 0.194727 4.2:+12152132 None:intergenic
GATTTCCGGGTTACTTAATA+AGG 0.206097 4.2:-12151945 MS.gene53503:CDS
TACGCGCGGGATTTGATTTC+CGG 0.208835 4.2:-12151959 MS.gene53503:CDS
TCATTTCTCTTGCATTGTTA+TGG 0.264166 4.2:-12152712 MS.gene53503:CDS
GCCCGCTCTTGTTCATTTGT+TGG 0.268785 4.2:-12152187 MS.gene53503:CDS
TTTATCTATGAACTTATTTA+CGG 0.276743 4.2:-12152085 MS.gene53503:CDS
GTAGTAATAGCAATAGTAGT+AGG 0.292562 4.2:-12151766 MS.gene53503:CDS
GAGTTTCCGGCGGCAACTTC+CGG 0.325096 4.2:+12152145 None:intergenic
GCCGTGGATTGGTGGTCGTT+TGG 0.326507 4.2:-12152112 MS.gene53503:CDS
GTTTGCGGCTCCATCGAATA+AGG 0.328263 4.2:-12152053 MS.gene53503:CDS
TTTCTTGAGCCAGGAACTTC+AGG 0.341156 4.2:+12151821 None:intergenic
GAAATCACATAGAGCTGAAA+TGG 0.348283 4.2:-12152802 MS.gene53503:CDS
TTCAAGCGTGCTTGAGGCCG+TGG 0.353163 4.2:+12151985 None:intergenic
CCGTGGATTGGTGGTCGTTT+GGG 0.365851 4.2:-12152111 MS.gene53503:CDS
TTAACGCCGCCTGAAGTTCC+TGG 0.377497 4.2:-12151830 MS.gene53503:CDS
CGTATCGGCGCCGGAGATAT+CGG 0.399970 4.2:-12152918 MS.gene53503:CDS
CGACCTTCTTCCACCTTCAC+CGG 0.400011 4.2:-12153054 MS.gene53503:CDS
CCTTACGTGACTTGAATAAC+CGG 0.404078 4.2:+12152257 None:intergenic
TTACGGTCGTACTCCGTTTG+CGG 0.414214 4.2:-12152068 MS.gene53503:CDS
TTCAAACCGTTCAACCAAAC+CGG 0.428406 4.2:-12152234 MS.gene53503:CDS
TGTTGTACCATGTTAGAAAC+TGG 0.428557 4.2:-12153185 None:intergenic
GCATAGAGTGTAGGAAGAAA+AGG 0.432484 4.2:+12152750 None:intergenic
GTGAGGGTGTTTGTGGCGTA+TGG 0.435424 4.2:+12152662 None:intergenic
CGCAGTGTTTCCTTATTCGA+TGG 0.435512 4.2:+12152043 None:intergenic
TTATCTGATGATTCAACGGC+TGG 0.439572 4.2:+12152364 None:intergenic
CGATATCTCCGGCGCCGATA+CGG 0.439632 4.2:+12152919 None:intergenic
CGGAGGAGCGGTGAGGTTTG+AGG 0.441661 4.2:+12153021 None:intergenic
GGAGGAGCGGTGAGGTTTGA+GGG 0.445021 4.2:+12153022 None:intergenic
TAGTAATAGCAATAGTAGTA+GGG 0.453024 4.2:-12151765 MS.gene53503:CDS
GAACAAGAGCGGGCAGAAAC+CGG 0.457262 4.2:+12152196 None:intergenic
ACGCGCGGGATTTGATTTCC+GGG 0.459360 4.2:-12151958 MS.gene53503:CDS
CTTCGTTTCTGAGGCGGCAG+AGG 0.467146 4.2:+12152886 None:intergenic
GATCGAACTAACACATTCTC+AGG 0.472536 4.2:+12152442 None:intergenic
CGGCGCCGATACGGCGGAGG+AGG 0.472990 4.2:+12152928 None:intergenic
TTATTCGATGGAGCCGCAAA+CGG 0.483287 4.2:+12152055 None:intergenic
CACTTGTTTGTATGCGATGA+AGG 0.483898 4.2:-12152856 MS.gene53503:CDS
GACGGTTGTGAGGGTGTTTG+TGG 0.483934 4.2:+12152655 None:intergenic
ACCAATCCACGGCGTTGCCG+TGG 0.489785 4.2:+12152122 None:intergenic
CCCACGGCAACGCCGTGGAT+TGG 0.491974 4.2:-12152123 MS.gene53503:CDS
TCTGAGGCGGCAGAGGTAAA+CGG 0.498075 4.2:+12152893 None:intergenic
AGTAATAGCAATAGTAGTAG+GGG 0.503772 4.2:-12151764 MS.gene53503:CDS
ACGGCAACGCCGTGGATTGG+TGG 0.504904 4.2:-12152120 MS.gene53503:CDS
CTCCTCCGCCGTATCGGCGC+CGG 0.505028 4.2:-12152927 MS.gene53503:CDS
ATTTACCTAGCGGAAGTAAG+AGG 0.510467 4.2:+12152630 None:intergenic
GGTTTGAGGGAGAGACTCTC+CGG 0.513127 4.2:+12153035 None:intergenic
GTGGGTGTTGGAAAAGTAAG+AGG 0.513288 4.2:+12152004 None:intergenic
TTTCACCTCCTCCGCCGTAT+CGG 0.514538 4.2:-12152933 MS.gene53503:CDS
GTGCTTGAGGCCGTGGGTGT+TGG 0.516685 4.2:+12151992 None:intergenic
GAATGGTGTAGGAAAAGAAC+GGG 0.518949 4.2:+12152294 None:intergenic
TTATGCAGCTGAAGTATTGG+TGG 0.519416 4.2:-12152512 MS.gene53503:CDS
CTCCGGCGCCGATACGGCGG+AGG 0.524516 4.2:+12152925 None:intergenic
AGCTGAAGTATTGGTGGCAT+TGG 0.529070 4.2:-12152506 MS.gene53503:CDS
TGTCATCTTCTTCGTTTCTG+AGG 0.535049 4.2:+12152877 None:intergenic
TCCAACAAATGAACAAGAGC+GGG 0.536839 4.2:+12152186 None:intergenic
TAAATTATCTGATGATTCAA+CGG 0.538115 4.2:+12152360 None:intergenic
CAACGACTCGGGTCTAAACG+TGG 0.539047 4.2:-12151914 MS.gene53503:CDS
TAAGAGGAAGACGGTTGTGA+GGG 0.539144 4.2:+12152646 None:intergenic
CGGATCCTTATTAAGTAACC+CGG 0.541564 4.2:+12151940 None:intergenic
TTTGTATGCGATGAAGGTTG+TGG 0.541682 4.2:-12152850 MS.gene53503:CDS
TTGGAGTACCTTCACATGCT+AGG 0.543818 4.2:-12152487 MS.gene53503:CDS
GTAAGAGGAAGACGGTTGTG+AGG 0.548424 4.2:+12152645 None:intergenic
CGGTTTGAAAAGCAAGTGAA+TGG 0.548672 4.2:+12152277 None:intergenic
GAAAAGCAAGTGAATGGTGT+AGG 0.548777 4.2:+12152283 None:intergenic
CCGGTTATTCAAGTCACGTA+AGG 0.551242 4.2:-12152257 MS.gene53503:CDS
GAGAGACTCTCCGGTGAAGG+TGG 0.552451 4.2:+12153044 None:intergenic
TCTCCGGTGAAGGTGGAAGA+AGG 0.552885 4.2:+12153051 None:intergenic
AGGATCCGACTCAACGACTC+GGG 0.561444 4.2:-12151925 MS.gene53503:CDS
GTCTCGCCGGAAGTTGCCGC+CGG 0.563258 4.2:-12152151 MS.gene53503:CDS
TATCTCCGGCGCCGATACGG+CGG 0.569059 4.2:+12152922 None:intergenic
AGGGAGAGACTCTCCGGTGA+AGG 0.573191 4.2:+12153041 None:intergenic
GTAAACGGTGCCGATATCTC+CGG 0.574418 4.2:+12152908 None:intergenic
ATGTGAGAGCGGACTTGCGA+CGG 0.580197 4.2:+12152964 None:intergenic
GAAAAGAACGGGAACGAGTG+TGG 0.580223 4.2:+12152305 None:intergenic
CATCTTCTTCGTTTCTGAGG+CGG 0.581374 4.2:+12152880 None:intergenic
TCAAACTCAGCATAGAGTGT+AGG 0.584379 4.2:+12152741 None:intergenic
GTAGAGTTCAAGCGTGCTTG+AGG 0.584583 4.2:+12151979 None:intergenic
TCAAGCGTGCTTGAGGCCGT+GGG 0.588656 4.2:+12151986 None:intergenic
AACACATGAATATGTCTCGC+CGG 0.593503 4.2:-12152164 MS.gene53503:CDS
TATCTGATGATTCAACGGCT+GGG 0.596183 4.2:+12152365 None:intergenic
GAAGGTAGCGGAACGGATGG+CGG 0.596507 4.2:+12152986 None:intergenic
GATGGCGGAGTAAGCGAAGT+CGG 0.597879 4.2:+12153001 None:intergenic
CCAATCCACGGCGTTGCCGT+GGG 0.598052 4.2:+12152123 None:intergenic
AAAAGAACGGGAACGAGTGT+GGG 0.602367 4.2:+12152306 None:intergenic
ACGGAAGGTAGCGGAACGGA+TGG 0.603297 4.2:+12152983 None:intergenic
CACGCTTGAACTCTACGCGC+GGG 0.603495 4.2:-12151972 MS.gene53503:CDS
CCCAAACGACCACCAATCCA+CGG 0.607776 4.2:+12152111 None:intergenic
GGACTTGCGACGGAAGGTAG+CGG 0.609884 4.2:+12152974 None:intergenic
TATGGAATGCAAGTCACCAC+CGG 0.613302 4.2:+12152680 None:intergenic
AAACTCCCACGGCAACGCCG+TGG 0.617090 4.2:-12152128 MS.gene53503:CDS
AGAACGGGAACGAGTGTGGG+AGG 0.620656 4.2:+12152309 None:intergenic
AAGGATCCGACTCAACGACT+CGG 0.623405 4.2:-12151926 MS.gene53503:CDS
GTTGCCGCCGGAAACTCCCA+CGG 0.625351 4.2:-12152139 MS.gene53503:CDS
CTTGAGCCAGGAACTTCAGG+CGG 0.630339 4.2:+12151824 None:intergenic
GTTGCCGTGGGAGTTTCCGG+CGG 0.640921 4.2:+12152135 None:intergenic
TTCCAACAAATGAACAAGAG+CGG 0.641367 4.2:+12152185 None:intergenic
TTAGACCCGAGTCGTTGAGT+CGG 0.643231 4.2:+12151920 None:intergenic
AATGTGTTAGTTCGATCAGA+CGG 0.646609 4.2:-12152436 MS.gene53503:CDS
GATGAAGGTTGTGGATAAAG+AGG 0.646934 4.2:-12152841 MS.gene53503:CDS
AAATGATTCCTAGCATGTGA+AGG 0.647952 4.2:+12152479 None:intergenic
GAAGAAGGTCGAATGAAAGA+CGG 0.651843 4.2:+12153066 None:intergenic
GCACGCTTGAACTCTACGCG+CGG 0.659257 4.2:-12151973 MS.gene53503:CDS
AGTAAGCGAAGTCGGAGGAG+CGG 0.659359 4.2:+12153009 None:intergenic
TGAATGGTGTAGGAAAAGAA+CGG 0.666750 4.2:+12152293 None:intergenic
GGCGGAGGAGGTGAAAGTCA+CGG 0.667380 4.2:+12152940 None:intergenic
GTCTTCCTCTTACTTCCGCT+AGG 0.667703 4.2:-12152635 MS.gene53503:intron
ACTCGGGTCTAAACGTGGGT+CGG 0.670437 4.2:-12151909 MS.gene53503:CDS
GAGAGCGGACTTGCGACGGA+AGG 0.672834 4.2:+12152968 None:intergenic
TAGCGGAAGTAAGAGGAAGA+CGG 0.675534 4.2:+12152637 None:intergenic
GTAATAGCAATAGTAGTAGG+GGG 0.678715 4.2:-12151763 MS.gene53503:CDS
AACGACTCGGGTCTAAACGT+GGG 0.679805 4.2:-12151913 MS.gene53503:CDS
ACGTGCACCAGTTTCTAACA+TGG 0.682148 4.2:+12153178 None:intergenic
AAAGTCACGGAATGTGAGAG+CGG 0.682400 4.2:+12152953 None:intergenic
GAACGGGAACGAGTGTGGGA+GGG 0.689524 4.2:+12152310 None:intergenic
GCGAAGTCGGAGGAGCGGTG+AGG 0.701596 4.2:+12153014 None:intergenic
TGCGACGGAAGGTAGCGGAA+CGG 0.710050 4.2:+12152979 None:intergenic
GGCGGAGTAAGCGAAGTCGG+AGG 0.716616 4.2:+12153004 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCTATGAACTTATTTA+CGG - chr4.2:12152821-12152840 MS.gene53503:CDS 15.0%
!! TAAATTATCTGATGATTCAA+CGG + chr4.2:12152549-12152568 None:intergenic 20.0%
!!! GTTTTTTAAAGGGATTAATT+TGG - chr4.2:12153039-12153058 MS.gene53503:CDS 20.0%
! TAGTAATAGCAATAGTAGTA+GGG - chr4.2:12153141-12153160 MS.gene53503:CDS 25.0%
!! ATTGTTATGGAATTTTGTTC+CGG - chr4.2:12152207-12152226 MS.gene53503:CDS 25.0%
!!! AAGAAGCATTCGTTTTTTAA+AGG - chr4.2:12153028-12153047 MS.gene53503:CDS 25.0%
!!! AGAAGCATTCGTTTTTTAAA+GGG - chr4.2:12153029-12153048 MS.gene53503:CDS 25.0%
AGTAATAGCAATAGTAGTAG+GGG - chr4.2:12153142-12153161 MS.gene53503:CDS 30.0%
GTAGTAATAGCAATAGTAGT+AGG - chr4.2:12153140-12153159 MS.gene53503:CDS 30.0%
TCATTTCTCTTGCATTGTTA+TGG - chr4.2:12152194-12152213 MS.gene53503:CDS 30.0%
! ATTTTATGCAGCTGAAGTAT+TGG - chr4.2:12152391-12152410 MS.gene53503:CDS 30.0%
! TGATAAAACGACATCGTTTT+TGG + chr4.2:12153112-12153131 None:intergenic 30.0%
!!! AAAACGATGTCGTTTTATCA+TGG - chr4.2:12153112-12153131 MS.gene53503:CDS 30.0%
!!! AAACGATGTCGTTTTATCAT+GGG - chr4.2:12153113-12153132 MS.gene53503:CDS 30.0%
AAATGATTCCTAGCATGTGA+AGG + chr4.2:12152430-12152449 None:intergenic 35.0%
AATGTGTTAGTTCGATCAGA+CGG - chr4.2:12152470-12152489 MS.gene53503:CDS 35.0%
GAAATCACATAGAGCTGAAA+TGG - chr4.2:12152104-12152123 MS.gene53503:CDS 35.0%
GATTTCCGGGTTACTTAATA+AGG - chr4.2:12152961-12152980 MS.gene53503:CDS 35.0%
GTAATAGCAATAGTAGTAGG+GGG - chr4.2:12153143-12153162 MS.gene53503:CDS 35.0%
TGAATGGTGTAGGAAAAGAA+CGG + chr4.2:12152616-12152635 None:intergenic 35.0%
TTCCAACAAATGAACAAGAG+CGG + chr4.2:12152724-12152743 None:intergenic 35.0%
! GGGTAATGTTGATGAAAAAG+TGG + chr4.2:12152579-12152598 None:intergenic 35.0%
!! CATTCACTTGCTTTTCAAAC+CGG - chr4.2:12152630-12152649 MS.gene53503:intron 35.0%
!!! ATGTCGTTTTATCATGGGAA+GGG - chr4.2:12153118-12153137 MS.gene53503:CDS 35.0%
!!! GTTTTGAGAGATTTACCTAG+CGG + chr4.2:12152289-12152308 None:intergenic 35.0%
AACACATGAATATGTCTCGC+CGG - chr4.2:12152742-12152761 MS.gene53503:CDS 40.0%
ATTTACCTAGCGGAAGTAAG+AGG + chr4.2:12152279-12152298 None:intergenic 40.0%
CACTTGTTTGTATGCGATGA+AGG - chr4.2:12152050-12152069 MS.gene53503:CDS 40.0%
CCTTACGTGACTTGAATAAC+CGG + chr4.2:12152652-12152671 None:intergenic 40.0%
CGGATCCTTATTAAGTAACC+CGG + chr4.2:12152969-12152988 None:intergenic 40.0%
CGGTTTGAAAAGCAAGTGAA+TGG + chr4.2:12152632-12152651 None:intergenic 40.0%
GAAAAGCAAGTGAATGGTGT+AGG + chr4.2:12152626-12152645 None:intergenic 40.0%
GAAGAAGGTCGAATGAAAGA+CGG + chr4.2:12151843-12151862 None:intergenic 40.0%
GAATGGTGTAGGAAAAGAAC+GGG + chr4.2:12152615-12152634 None:intergenic 40.0%
GATCGAACTAACACATTCTC+AGG + chr4.2:12152467-12152486 None:intergenic 40.0%
GATGAAGGTTGTGGATAAAG+AGG - chr4.2:12152065-12152084 MS.gene53503:CDS 40.0%
GCATAGAGTGTAGGAAGAAA+AGG + chr4.2:12152159-12152178 None:intergenic 40.0%
TATCTGATGATTCAACGGCT+GGG + chr4.2:12152544-12152563 None:intergenic 40.0%
TCAAACTCAGCATAGAGTGT+AGG + chr4.2:12152168-12152187 None:intergenic 40.0%
TCCAACAAATGAACAAGAGC+GGG + chr4.2:12152723-12152742 None:intergenic 40.0%
TGTCATCTTCTTCGTTTCTG+AGG + chr4.2:12152032-12152051 None:intergenic 40.0%
TTATCTGATGATTCAACGGC+TGG + chr4.2:12152545-12152564 None:intergenic 40.0%
TTCAAACCGTTCAACCAAAC+CGG - chr4.2:12152672-12152691 MS.gene53503:CDS 40.0%
TTTGTATGCGATGAAGGTTG+TGG - chr4.2:12152056-12152075 MS.gene53503:CDS 40.0%
! GTTATGGAATTTTGTTCCGG+TGG - chr4.2:12152210-12152229 MS.gene53503:CDS 40.0%
!! AAAAAGCCGGTTTGGTTGAA+CGG + chr4.2:12152681-12152700 None:intergenic 40.0%
!! TCTTACTTTTCCAACACCCA+CGG - chr4.2:12152904-12152923 MS.gene53503:CDS 40.0%
!! TTATGCAGCTGAAGTATTGG+TGG - chr4.2:12152394-12152413 MS.gene53503:CDS 40.0%
!!! GATGTCGTTTTATCATGGGA+AGG - chr4.2:12153117-12153136 MS.gene53503:CDS 40.0%
AAAAGAACGGGAACGAGTGT+GGG + chr4.2:12152603-12152622 None:intergenic 45.0%
AAAGTCACGGAATGTGAGAG+CGG + chr4.2:12151956-12151975 None:intergenic 45.0%
CCGGTTATTCAAGTCACGTA+AGG - chr4.2:12152649-12152668 MS.gene53503:CDS 45.0%
CGCAGTGTTTCCTTATTCGA+TGG + chr4.2:12152866-12152885 None:intergenic 45.0%
TAAGAGGAAGACGGTTGTGA+GGG + chr4.2:12152263-12152282 None:intergenic 45.0%
TAGCGGAAGTAAGAGGAAGA+CGG + chr4.2:12152272-12152291 None:intergenic 45.0%
TAGTAGTAGGGGGCAACAAA+CGG - chr4.2:12153153-12153172 MS.gene53503:CDS 45.0%
TATGGAATGCAAGTCACCAC+CGG + chr4.2:12152229-12152248 None:intergenic 45.0%
TCAGCTACAAAAAGCCGGTT+TGG + chr4.2:12152689-12152708 None:intergenic 45.0%
TTATTCGATGGAGCCGCAAA+CGG + chr4.2:12152854-12152873 None:intergenic 45.0%
TTTCTTGAGCCAGGAACTTC+AGG + chr4.2:12153088-12153107 None:intergenic 45.0%
! CATCTTCTTCGTTTCTGAGG+CGG + chr4.2:12152029-12152048 None:intergenic 45.0%
! TTGGAGTACCTTCACATGCT+AGG - chr4.2:12152419-12152438 MS.gene53503:CDS 45.0%
!! AGCTGAAGTATTGGTGGCAT+TGG - chr4.2:12152400-12152419 MS.gene53503:CDS 45.0%
!! GTGGGTGTTGGAAAAGTAAG+AGG + chr4.2:12152905-12152924 None:intergenic 45.0%
!!! GTTTTTGGCTTTCTTGAGCC+AGG + chr4.2:12153097-12153116 None:intergenic 45.0%
AAGGATCCGACTCAACGACT+CGG - chr4.2:12152980-12152999 MS.gene53503:CDS 50.0%
CCGGTTCAGCTACAAAAAGC+CGG + chr4.2:12152694-12152713 None:intergenic 50.0%
GAAAAGAACGGGAACGAGTG+TGG + chr4.2:12152604-12152623 None:intergenic 50.0%
GCCCGCTCTTGTTCATTTGT+TGG - chr4.2:12152719-12152738 MS.gene53503:CDS 50.0%
GTAAGAGGAAGACGGTTGTG+AGG + chr4.2:12152264-12152283 None:intergenic 50.0%
GTAGAGTTCAAGCGTGCTTG+AGG + chr4.2:12152930-12152949 None:intergenic 50.0%
GTCTTCCTCTTACTTCCGCT+AGG - chr4.2:12152271-12152290 MS.gene53503:CDS 50.0%
GTTTGCGGCTCCATCGAATA+AGG - chr4.2:12152853-12152872 MS.gene53503:CDS 50.0%
TTACGGTCGTACTCCGTTTG+CGG - chr4.2:12152838-12152857 MS.gene53503:CDS 50.0%
TTAGACCCGAGTCGTTGAGT+CGG + chr4.2:12152989-12153008 None:intergenic 50.0%
! AACGACTCGGGTCTAAACGT+GGG - chr4.2:12152993-12153012 MS.gene53503:CDS 50.0%
! CCGGCTTTTTGTAGCTGAAC+CGG - chr4.2:12152691-12152710 MS.gene53503:CDS 50.0%
! TACGCGCGGGATTTGATTTC+CGG - chr4.2:12152947-12152966 MS.gene53503:CDS 50.0%
!! GTAAACGGTGCCGATATCTC+CGG + chr4.2:12152001-12152020 None:intergenic 50.0%
ACTCGGGTCTAAACGTGGGT+CGG - chr4.2:12152997-12153016 MS.gene53503:CDS 55.0%
AGGATCCGACTCAACGACTC+GGG - chr4.2:12152981-12153000 MS.gene53503:CDS 55.0%
AGTAAGCGAAGTCGGAGGAG+CGG + chr4.2:12151900-12151919 None:intergenic 55.0%
CCCAAACGACCACCAATCCA+CGG + chr4.2:12152798-12152817 None:intergenic 55.0%
CGACCTTCTTCCACCTTCAC+CGG - chr4.2:12151852-12151871 MS.gene53503:CDS 55.0%
CTTGAGCCAGGAACTTCAGG+CGG + chr4.2:12153085-12153104 None:intergenic 55.0%
GAACAAGAGCGGGCAGAAAC+CGG + chr4.2:12152713-12152732 None:intergenic 55.0%
GGTTTGAGGGAGAGACTCTC+CGG + chr4.2:12151874-12151893 None:intergenic 55.0%
TCTCCGGTGAAGGTGGAAGA+AGG + chr4.2:12151858-12151877 None:intergenic 55.0%
TTAACGCCGCCTGAAGTTCC+TGG - chr4.2:12153076-12153095 MS.gene53503:CDS 55.0%
TTTCACCTCCTCCGCCGTAT+CGG - chr4.2:12151973-12151992 MS.gene53503:CDS 55.0%
! ACGCGCGGGATTTGATTTCC+GGG - chr4.2:12152948-12152967 MS.gene53503:CDS 55.0%
! ATGTGAGAGCGGACTTGCGA+CGG + chr4.2:12151945-12151964 None:intergenic 55.0%
! CAACGACTCGGGTCTAAACG+TGG - chr4.2:12152992-12153011 MS.gene53503:CDS 55.0%
! TCTGAGGCGGCAGAGGTAAA+CGG + chr4.2:12152016-12152035 None:intergenic 55.0%
!! CCGTGGATTGGTGGTCGTTT+GGG - chr4.2:12152795-12152814 MS.gene53503:CDS 55.0%
!! GACGGTTGTGAGGGTGTTTG+TGG + chr4.2:12152254-12152273 None:intergenic 55.0%
!! GATGGCGGAGTAAGCGAAGT+CGG + chr4.2:12151908-12151927 None:intergenic 55.0%
!! GTGAGGGTGTTTGTGGCGTA+TGG + chr4.2:12152247-12152266 None:intergenic 55.0%
AGAACGGGAACGAGTGTGGG+AGG + chr4.2:12152600-12152619 None:intergenic 60.0%
AGGGAGAGACTCTCCGGTGA+AGG + chr4.2:12151868-12151887 None:intergenic 60.0%
CACGCTTGAACTCTACGCGC+GGG - chr4.2:12152934-12152953 MS.gene53503:CDS 60.0%
GAACGGGAACGAGTGTGGGA+GGG + chr4.2:12152599-12152618 None:intergenic 60.0%
GAGAGACTCTCCGGTGAAGG+TGG + chr4.2:12151865-12151884 None:intergenic 60.0%
GAGTTTCCGGCGGCAACTTC+CGG + chr4.2:12152764-12152783 None:intergenic 60.0%
GCACGCTTGAACTCTACGCG+CGG - chr4.2:12152933-12152952 MS.gene53503:CDS 60.0%
GGACTTGCGACGGAAGGTAG+CGG + chr4.2:12151935-12151954 None:intergenic 60.0%
GGAGGAGCGGTGAGGTTTGA+GGG + chr4.2:12151887-12151906 None:intergenic 60.0%
GGCGGAGGAGGTGAAAGTCA+CGG + chr4.2:12151969-12151988 None:intergenic 60.0%
TCAAGCGTGCTTGAGGCCGT+GGG + chr4.2:12152923-12152942 None:intergenic 60.0%
TTCAAGCGTGCTTGAGGCCG+TGG + chr4.2:12152924-12152943 None:intergenic 60.0%
! CGTATCGGCGCCGGAGATAT+CGG - chr4.2:12151988-12152007 MS.gene53503:CDS 60.0%
!! ACGGAAGGTAGCGGAACGGA+TGG + chr4.2:12151926-12151945 None:intergenic 60.0%
!! CGATATCTCCGGCGCCGATA+CGG + chr4.2:12151990-12152009 None:intergenic 60.0%
!! CTTCGTTTCTGAGGCGGCAG+AGG + chr4.2:12152023-12152042 None:intergenic 60.0%
!! GAAGGTAGCGGAACGGATGG+CGG + chr4.2:12151923-12151942 None:intergenic 60.0%
!! GCCGTGGATTGGTGGTCGTT+TGG - chr4.2:12152794-12152813 MS.gene53503:CDS 60.0%
!! TGCGACGGAAGGTAGCGGAA+CGG + chr4.2:12151930-12151949 None:intergenic 60.0%
AAACTCCCACGGCAACGCCG+TGG - chr4.2:12152778-12152797 MS.gene53503:CDS 65.0%
ACCAATCCACGGCGTTGCCG+TGG + chr4.2:12152787-12152806 None:intergenic 65.0%
CCAATCCACGGCGTTGCCGT+GGG + chr4.2:12152786-12152805 None:intergenic 65.0%
CGGAGGAGCGGTGAGGTTTG+AGG + chr4.2:12151888-12151907 None:intergenic 65.0%
GGCGGAGTAAGCGAAGTCGG+AGG + chr4.2:12151905-12151924 None:intergenic 65.0%
GGCGTTGCCGTGGGAGTTTC+CGG + chr4.2:12152777-12152796 None:intergenic 65.0%
GTGCTTGAGGCCGTGGGTGT+TGG + chr4.2:12152917-12152936 None:intergenic 65.0%
GTTGCCGCCGGAAACTCCCA+CGG - chr4.2:12152767-12152786 MS.gene53503:CDS 65.0%
GTTGCCGTGGGAGTTTCCGG+CGG + chr4.2:12152774-12152793 None:intergenic 65.0%
! GAGAGCGGACTTGCGACGGA+AGG + chr4.2:12151941-12151960 None:intergenic 65.0%
!! ACGGCAACGCCGTGGATTGG+TGG - chr4.2:12152786-12152805 MS.gene53503:CDS 65.0%
!! TATCTCCGGCGCCGATACGG+CGG + chr4.2:12151987-12152006 None:intergenic 65.0%
CCCACGGCAACGCCGTGGAT+TGG - chr4.2:12152783-12152802 MS.gene53503:CDS 70.0%
GCGAAGTCGGAGGAGCGGTG+AGG + chr4.2:12151895-12151914 None:intergenic 70.0%
GTCTCGCCGGAAGTTGCCGC+CGG - chr4.2:12152755-12152774 MS.gene53503:CDS 70.0%
! CTCCTCCGCCGTATCGGCGC+CGG - chr4.2:12151979-12151998 MS.gene53503:CDS 75.0%
!!! CGGCGCCGATACGGCGGAGG+AGG + chr4.2:12151981-12152000 None:intergenic 80.0%
!!! CTCCGGCGCCGATACGGCGG+AGG + chr4.2:12151984-12152003 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 12151730 12153198 12151730 ID=MS.gene53503
chr4.2 mRNA 12151730 12153198 12151730 ID=MS.gene53503.t1;Parent=MS.gene53503
chr4.2 exon 12152636 12153198 12152636 ID=MS.gene53503.t1.exon1;Parent=MS.gene53503.t1
chr4.2 CDS 12152636 12153198 12152636 ID=cds.MS.gene53503.t1;Parent=MS.gene53503.t1
chr4.2 exon 12151730 12152537 12151730 ID=MS.gene53503.t1.exon2;Parent=MS.gene53503.t1
chr4.2 CDS 12151730 12152537 12151730 ID=cds.MS.gene53503.t1;Parent=MS.gene53503.t1
Gene Sequence

>MS.gene53503

ATGTTAGAAACTGGTGCACGTGATTCTGAGTTGAGTTTAGAAACTGTGAATTCAAGTTCAACACAACGAAGCTCAATGAGCAGTGAAAGCATTTGCAGCACTAGTTTCAGCCGTCTTTCATTCGACCTTCTTCCACCTTCACCGGAGAGTCTCTCCCTCAAACCTCACCGCTCCTCCGACTTCGCTTACTCCGCCATCCGTTCCGCTACCTTCCGTCGCAAGTCCGCTCTCACATTCCGTGACTTTCACCTCCTCCGCCGTATCGGCGCCGGAGATATCGGCACCGTTTACCTCTGCCGCCTCAGAAACGAAGAAGATGACACTTGTTTGTATGCGATGAAGGTTGTGGATAAAGAGGTTGTTGCATTGAAGAAGAAATCACATAGAGCTGAAATGGAGAGAAAGATTCTGAAAATGCTTGATCATCCTTTTCTTCCTACACTCTATGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAATTTTGTTCCGGTGGTGACTTGCATTCCATACGCCACAAACACCCTCACAACCGTCTTCCTCTTACTTCCGCTAGGTAAATCTCTCAAAACACAGTCTATTTTACGAATCTAAACTACAAGAACTGAATGTATAAGTTATATGCTCATGTTATTTTTGTATATTGTTACTCAGATTTTATGCAGCTGAAGTATTGGTGGCATTGGAGTACCTTCACATGCTAGGAATCATTTACAGAGATCTAAAGCCTGAGAATGTGTTAGTTCGATCAGACGGTCACATTATGCTTTCAGATTTCGATCTTTCACTTTGCTCAAATGCAATCCCAGCCGTTGAATCATCAGATAATTTACAAGATTCCACTTTTTCATCAACATTACCCTCCCACACTCGTTCCCGTTCTTTTCCTACACCATTCACTTGCTTTTCAAACCGGTTATTCAAGTCACGTAAGGTTCAAACCGTTCAACCAAACCGGCTTTTTGTAGCTGAACCGGTTTCTGCCCGCTCTTGTTCATTTGTTGGAACACATGAATATGTCTCGCCGGAAGTTGCCGCCGGAAACTCCCACGGCAACGCCGTGGATTGGTGGTCGTTTGGGATATTTATCTATGAACTTATTTACGGTCGTACTCCGTTTGCGGCTCCATCGAATAAGGAAACACTGCGTAACATCTTAAAAAAGCCTCTTACTTTTCCAACACCCACGGCCTCAAGCACGCTTGAACTCTACGCGCGGGATTTGATTTCCGGGTTACTTAATAAGGATCCGACTCAACGACTCGGGTCTAAACGTGGGTCGGCTGACGTCAAGAAGCATTCGTTTTTTAAAGGGATTAATTTGGCGCTGATTCGTATGTTAACGCCGCCTGAAGTTCCTGGCTCAAGAAAGCCAAAAACGATGTCGTTTTATCATGGGAAGGGTAGTAATAGCAATAGTAGTAGGGGGCAACAAACGGCGTCGTTTGATGTTTACTTTTGA
Protein sequence

>MS.gene53503.t1

MLETGARDSELSLETVNSSSTQRSSMSSESICSTSFSRLSFDLLPPSPESLSLKPHRSSDFAYSAIRSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRNEEDDTCLYAMKVVDKEVVALKKKSHRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSIRHKHPHNRLPLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESSDNLQDSTFSSTLPSHTRSRSFPTPFTCFSNRLFKSRKVQTVQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGRTPFAAPSNKETLRNILKKPLTFPTPTASSTLELYARDLISGLLNKDPTQRLGSKRGSADVKKHSFFKGINLALIRMLTPPEVPGSRKPKTMSFYHGKGSNSNSSRGQQTASFDVYF