AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64891

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64891.t1 MTR_5g024270 98.655 446 6 0 1 446 1 446 0.0 919
MS.gene64891.t1 MTR_8g073250 82.063 446 76 2 1 446 1 442 0.0 739
MS.gene64891.t1 MTR_5g024270 97.953 342 7 0 1 342 1 342 0.0 701
MS.gene64891.t1 MTR_1g061690 52.854 473 163 6 2 415 8 479 2.59e-174 499
MS.gene64891.t1 MTR_2g084555 48.450 516 186 5 6 442 8 522 1.29e-169 487
MS.gene64891.t1 MTR_4g056390 51.496 468 162 5 12 415 13 479 4.66e-169 486
MS.gene64891.t1 MTR_3g109390 31.525 387 195 10 37 414 51 376 1.08e-44 160
MS.gene64891.t1 MTR_3g109390 31.525 387 195 10 37 414 73 398 2.07e-44 160
MS.gene64891.t1 MTR_3g109390 31.783 387 192 11 37 414 73 396 7.84e-44 158
MS.gene64891.t1 MTR_3g109390 31.300 377 189 10 47 414 70 385 1.43e-42 155
MS.gene64891.t1 MTR_3g109390 31.300 377 189 10 47 414 92 407 3.77e-42 154
MS.gene64891.t1 MTR_3g109390 32.500 320 155 8 37 356 73 331 1.87e-38 142
MS.gene64891.t1 MTR_3g076540 27.970 404 219 10 21 414 78 419 1.76e-37 142
MS.gene64891.t1 MTR_4g104620 28.429 401 215 11 21 411 82 420 3.51e-37 141
MS.gene64891.t1 MTR_3g076540 28.351 388 207 9 37 414 11 337 5.20e-37 139
MS.gene64891.t1 MTR_4g104620 28.760 379 199 10 43 411 9 326 6.24e-36 135
MS.gene64891.t1 MTR_3g076540 28.084 381 203 9 44 414 1 320 1.62e-35 134
MS.gene64891.t1 MTR_4g104620 28.571 378 199 10 44 411 1 317 2.08e-35 134
MS.gene64891.t1 MTR_3g076540 27.427 412 219 11 21 414 78 427 5.20e-35 135
MS.gene64891.t1 MTR_3g086530 28.363 342 180 9 21 358 77 357 1.22e-33 130
MS.gene64891.t1 MTR_3g086530 27.873 409 217 12 21 415 77 421 1.64e-33 130
MS.gene64891.t1 MTR_3g086530 28.142 366 186 11 64 415 2 304 2.97e-29 116
MS.gene64891.t1 MTR_3g086530 28.223 287 154 8 21 306 77 312 3.60e-27 111
MS.gene64891.t1 MTR_5g082700 24.495 396 205 11 29 414 394 705 5.73e-24 105
MS.gene64891.t1 MTR_8g070930 40.000 145 81 3 37 180 138 277 4.03e-22 100
MS.gene64891.t1 MTR_8g070930 39.450 109 58 3 254 361 285 386 6.55e-14 74.7
MS.gene64891.t1 MTR_3g086530 27.687 307 150 9 123 415 1 249 1.00e-20 91.7
MS.gene64891.t1 MTR_0349s0030 31.176 170 102 5 252 415 125 285 2.52e-19 88.6
MS.gene64891.t1 MTR_6g074905 31.361 169 101 5 252 414 1005 1164 2.57e-19 91.7
MS.gene64891.t1 MTR_5g082700 23.256 344 176 8 29 366 394 655 3.13e-16 81.6
MS.gene64891.t1 MTR_5g082700 34.194 155 93 3 29 179 394 543 3.22e-16 81.3
MS.gene64891.t1 MTR_1g111180 34.615 182 85 8 254 414 822 990 1.47e-14 76.6
MS.gene64891.t1 MTR_1g111180 30.814 172 100 5 11 177 657 814 3.90e-14 75.5
MS.gene64891.t1 MTR_1g111180 34.615 182 85 8 254 414 823 991 1.48e-14 76.6
MS.gene64891.t1 MTR_1g111180 30.814 172 100 5 11 177 658 815 4.01e-14 75.5
MS.gene64891.t1 MTR_6g074870 30.645 124 75 3 252 371 236 352 3.82e-13 70.9
MS.gene64891.t1 MTR_6g074750 43.333 60 32 1 252 309 54 113 2.63e-12 63.9
MS.gene64891.t1 MTR_3g110180 30.822 146 85 5 34 177 5 136 4.40e-11 65.1
MS.gene64891.t1 MTR_3g110180 30.822 146 85 5 34 177 5 136 4.63e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64891.t1 AT4G35500 72.870 446 109 4 1 443 1 437 0.0 653
MS.gene64891.t1 AT2G17530 75.730 445 97 4 1 443 1 436 0.0 647
MS.gene64891.t1 AT2G17530 75.730 445 97 4 1 443 1 436 0.0 647
MS.gene64891.t1 AT4G35500 70.694 447 118 5 1 443 1 438 0.0 628
MS.gene64891.t1 AT2G17530 79.592 343 67 3 1 341 1 342 0.0 517
MS.gene64891.t1 AT3G53030 49.901 505 184 8 5 442 7 509 4.57e-171 491
MS.gene64891.t1 AT3G44850 51.613 465 163 7 12 415 19 482 1.58e-164 474
MS.gene64891.t1 AT5G22840 50.753 465 172 5 4 415 11 471 7.11e-164 473
MS.gene64891.t1 AT4G32660 30.123 405 209 12 21 414 55 396 1.64e-41 152
MS.gene64891.t1 AT4G32660 30.123 405 209 12 21 414 47 388 1.73e-41 152
MS.gene64891.t1 AT4G24740 29.310 406 211 12 21 414 44 385 3.19e-38 143
MS.gene64891.t1 AT4G24740 29.310 406 211 12 21 414 82 423 6.23e-38 143
MS.gene64891.t1 AT4G32660 30.861 337 171 10 21 356 55 330 1.89e-37 140
MS.gene64891.t1 AT4G24740 29.504 383 195 11 44 414 1 320 9.46e-37 137
MS.gene64891.t1 AT4G24740 29.504 383 195 11 44 414 1 320 9.46e-37 137
MS.gene64891.t1 AT4G24740 29.504 383 195 11 44 414 1 320 9.46e-37 137
MS.gene64891.t1 AT3G53570 28.676 408 216 11 21 415 99 444 1.19e-35 137
MS.gene64891.t1 AT3G53570 28.676 408 216 11 21 415 99 444 1.19e-35 137
MS.gene64891.t1 AT3G53570 28.676 408 216 11 21 415 99 444 1.19e-35 137
MS.gene64891.t1 AT3G53570 28.676 408 216 11 21 415 85 430 1.35e-35 137
MS.gene64891.t1 AT3G53570 28.676 408 216 11 21 415 85 430 1.35e-35 137
MS.gene64891.t1 AT4G24740 30.530 321 164 9 21 341 82 343 5.72e-34 130
MS.gene64891.t1 AT4G24740 30.872 298 148 8 44 341 1 240 1.01e-32 124
MS.gene64891.t1 AT4G32660 30.523 344 166 12 82 414 3 284 8.61e-32 123
MS.gene64891.t1 AT4G24740 30.420 286 147 8 21 306 82 315 6.66e-28 113
MS.gene64891.t1 AT5G35980 38.667 150 86 3 37 185 86 230 2.48e-22 100
MS.gene64891.t1 AT5G35980 42.424 99 50 2 254 352 232 323 1.76e-15 79.7
MS.gene64891.t1 AT5G35980 38.667 150 86 3 37 185 121 265 2.52e-22 100
MS.gene64891.t1 AT5G35980 42.424 99 50 2 254 352 267 358 1.88e-15 79.3
MS.gene64891.t1 AT5G35980 38.667 150 86 3 37 185 121 265 2.75e-22 100
MS.gene64891.t1 AT5G35980 42.424 99 50 2 254 352 267 358 2.01e-15 79.3
MS.gene64891.t1 AT1G73460 32.941 170 99 5 252 415 1001 1161 2.57e-21 97.8
MS.gene64891.t1 AT1G73460 32.258 155 96 3 29 179 849 998 1.57e-13 73.6
MS.gene64891.t1 AT1G73460 32.941 170 99 5 252 415 1001 1161 2.57e-21 97.8
MS.gene64891.t1 AT1G73460 32.258 155 96 3 29 179 849 998 1.57e-13 73.6
MS.gene64891.t1 AT1G73450 32.941 170 99 5 252 415 984 1144 2.65e-21 97.8
MS.gene64891.t1 AT1G73450 32.258 155 96 3 29 179 832 981 1.56e-13 73.6
MS.gene64891.t1 AT2G40120 24.060 399 213 12 29 419 252 568 8.26e-21 95.5
MS.gene64891.t1 AT4G24740 29.811 265 117 8 162 414 10 217 1.51e-20 90.5
MS.gene64891.t1 AT4G24740 29.811 265 117 8 162 414 10 217 1.51e-20 90.5
MS.gene64891.t1 AT3G17750 31.953 169 100 5 252 414 970 1129 4.55e-18 87.8
MS.gene64891.t1 AT3G17750 31.953 169 102 5 15 179 808 967 1.64e-13 73.6
MS.gene64891.t1 AT3G53640 32.961 179 93 6 254 414 470 639 1.13e-16 82.8
MS.gene64891.t1 AT3G53640 31.395 172 99 5 11 177 305 462 2.51e-12 69.3
MS.gene64891.t1 AT3G12690 26.573 286 177 9 42 315 189 453 9.71e-15 77.0
MS.gene64891.t1 AT3G12690 26.573 286 177 9 42 315 189 453 9.71e-15 77.0
MS.gene64891.t1 AT3G12690 26.573 286 177 9 42 315 189 453 9.71e-15 77.0
MS.gene64891.t1 AT1G13350 31.395 172 99 5 11 177 424 581 4.01e-14 75.1
MS.gene64891.t1 AT1G13350 30.168 179 98 6 254 414 589 758 1.11e-13 73.9
MS.gene64891.t1 AT1G13350 31.395 172 99 5 11 177 451 608 5.01e-14 74.7
MS.gene64891.t1 AT1G13350 30.168 179 98 6 254 414 616 785 1.33e-13 73.6
MS.gene64891.t1 AT1G13350 31.395 172 99 5 11 177 497 654 5.78e-14 74.7
MS.gene64891.t1 AT1G13350 30.168 179 98 6 254 414 662 831 1.07e-13 73.9
MS.gene64891.t1 AT3G25840 31.638 177 97 6 254 414 502 670 7.04e-14 74.3
MS.gene64891.t1 AT3G25840 30.233 172 101 5 11 177 337 494 2.58e-12 69.3
MS.gene64891.t1 AT3G25840 31.638 177 97 6 254 414 764 932 1.93e-13 73.2
MS.gene64891.t1 AT3G25840 30.233 172 101 5 11 177 599 756 2.60e-12 69.7
MS.gene64891.t1 AT4G26610 27.003 337 202 13 2 317 87 400 2.54e-12 68.9
MS.gene64891.t1 AT1G04440 28.571 147 93 4 31 177 2 136 7.56e-11 64.3

Find 116 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGCAAGATTGTCGATTT+TGG 0.222958 5.3:-14114394 MS.gene64891:CDS
ACCGGCATGGTGATCTAAAA+AGG 0.287476 5.3:-14113346 MS.gene64891:CDS
ATAACCTTGTCCACCACCTT+TGG 0.312925 5.3:+14114210 None:intergenic
TGCATGGTCCTTGAGTTTCT+TGG 0.316560 5.3:-14114796 MS.gene64891:CDS
TAACCTTGTCCACCACCTTT+GGG 0.320820 5.3:+14114211 None:intergenic
CCTCAGTCCGTTCTAAAGTT+GGG 0.329112 5.3:+14114569 None:intergenic
ATGTCTTGTTCTTCTTCATC+AGG 0.333473 5.3:-14116334 MS.gene64891:CDS
AGTTCAGCCAGGGGTGTTGC+AGG 0.337595 5.3:+14113180 None:intergenic
ACTTTCCTACCTTGATTTGA+AGG 0.337930 5.3:+14113087 None:intergenic
GGGGAGAGTCCGGATCTAAA+AGG 0.349666 5.3:+14114589 None:intergenic
TCCGGATCTAAAAGGGTCTT+TGG 0.351019 5.3:+14114597 None:intergenic
ATGCAATGGTGCTGCCCATT+TGG 0.353666 5.3:+14114814 None:intergenic
TGGGAGTGTACTCACCTTCC+GGG 0.362905 5.3:+14113468 None:intergenic
AAGTGCGGCCGAGTTTGTTC+AGG 0.372250 5.3:-14114938 MS.gene64891:CDS
GCGTGCAGTTGCTAAAATAT+CGG 0.390478 5.3:-14114488 MS.gene64891:CDS
GATTCATTTCTCATTTCATT+TGG 0.391464 5.3:+14113143 None:intergenic
GCTTAAAGTTATCAATCAAT+TGG 0.393123 5.3:+14114845 None:intergenic
ATCTCTCTAACTTTATTCAA+TGG 0.394338 5.3:+14114727 None:intergenic
TGCTCAGAGGAAACTTGGTT+GGG 0.402208 5.3:-14116218 MS.gene64891:CDS
GATTACTTGCATAGTGAACT+TGG 0.411710 5.3:-14114679 MS.gene64891:CDS
CCCTCAGTCCGTTCTAAAGT+TGG 0.414075 5.3:+14114568 None:intergenic
GGGGTCAATTCTCCACCGTT+TGG 0.419364 5.3:-14116198 MS.gene64891:CDS
TTTAAGCACACAGGTCCAAA+TGG 0.425606 5.3:-14114829 MS.gene64891:CDS
TGATTCATTGCAGTTCAGCC+AGG 0.429978 5.3:+14113169 None:intergenic
TTCTAAAGTTGGGGAGAGTC+CGG 0.433511 5.3:+14114579 None:intergenic
GGATCATCTTGCCTTGATGA+TGG 0.437810 5.3:-14113509 MS.gene64891:CDS
TTACAAGTCTTATTGAGAAA+AGG 0.437935 5.3:-14114528 MS.gene64891:CDS
CCAGACTTCAGTATAACTTC+AGG 0.439622 5.3:+14114310 None:intergenic
TGTGGATTGCAGATTGCAAT+TGG 0.442014 5.3:-14113395 MS.gene64891:intron
AAATGAATCTACTGTGGAAA+AGG 0.456827 5.3:-14113129 MS.gene64891:CDS
TATATTGCTCAGAGGAAACT+TGG 0.462401 5.3:-14116223 MS.gene64891:CDS
ACAACAAACTTTGAATTCGA+TGG 0.467683 5.3:+14114868 None:intergenic
TTGTTCTTCTTCATCAGGAT+CGG 0.468336 5.3:-14116329 MS.gene64891:CDS
GGCAATACCTGCAACACCCC+TGG 0.477580 5.3:-14113187 MS.gene64891:CDS
TCAATGGAAGACCTTTGTAA+TGG 0.483257 5.3:+14114743 None:intergenic
CGTGCAGTTGCTAAAATATC+GGG 0.483843 5.3:-14114487 MS.gene64891:CDS
GGAAGAACAACTTCAATTGA+AGG 0.487725 5.3:-14114466 MS.gene64891:CDS
AACTCCTCGGAAAGATGCCC+CGG 0.493756 5.3:-14113486 MS.gene64891:CDS
TTGCTCAGAGGAAACTTGGT+TGG 0.496479 5.3:-14116219 MS.gene64891:CDS
TTCTTTCAACCATTGCTGAT+GGG 0.501024 5.3:-14114894 MS.gene64891:CDS
CAGACTTCAGTATAACTTCA+GGG 0.503743 5.3:+14114311 None:intergenic
CCTGAAGTTATACTGAAGTC+TGG 0.506057 5.3:-14114310 MS.gene64891:CDS
GATTCATTGCAGTTCAGCCA+GGG 0.507004 5.3:+14113170 None:intergenic
ATGCCGGTCAAAGTAATCCT+TGG 0.507357 5.3:+14113361 None:intergenic
GTTCTTTCAACCATTGCTGA+TGG 0.515507 5.3:-14114895 MS.gene64891:CDS
TCCGAGGAGTTCCATCATCA+AGG 0.521134 5.3:+14113498 None:intergenic
ATTGCTTTCGAGCTTGCCAC+TGG 0.524146 5.3:-14114250 MS.gene64891:CDS
CTCAGTCCGTTCTAAAGTTG+GGG 0.526561 5.3:+14114570 None:intergenic
TCTTTCAACCATTGCTGATG+GGG 0.528594 5.3:-14114893 MS.gene64891:CDS
AATCCAAGGATTACTTTGAC+CGG 0.528653 5.3:-14113364 MS.gene64891:CDS
TATGAGCAACCTTCAAATCA+AGG 0.531115 5.3:-14113096 MS.gene64891:CDS
ACAACTTCAATTGAAGGAAG+AGG 0.534696 5.3:-14114460 MS.gene64891:CDS
CAACAAACTTTGAATTCGAT+GGG 0.538001 5.3:+14114869 None:intergenic
GGGAGAGTCCGGATCTAAAA+GGG 0.543496 5.3:+14114590 None:intergenic
TTATTTACACCCAAAGGTGG+TGG 0.545111 5.3:-14114220 MS.gene64891:CDS
TGCAGGTATTGCCGTGCAGT+TGG 0.547161 5.3:+14113197 None:intergenic
GGATTGCAGATTGCAATTGG+TGG 0.549667 5.3:-14113392 MS.gene64891:intron
ATGAGGGATTTGAGTCCTAT+CGG 0.552054 5.3:-14116297 MS.gene64891:CDS
TTAAGCACACAGGTCCAAAT+GGG 0.558245 5.3:-14114828 MS.gene64891:CDS
TCAATCAGCAATTTGTCAAG+TGG 0.561218 5.3:+14113302 None:intergenic
CTGATCAATTCGCGGGTGGG+AGG 0.561858 5.3:-14116246 MS.gene64891:CDS
GATATGTTATTTACACCCAA+AGG 0.565138 5.3:-14114226 MS.gene64891:CDS
ACACCCAAAGGTGGTGGACA+AGG 0.567008 5.3:-14114214 MS.gene64891:CDS
TAGAGTCGCTGATCAATTCG+CGG 0.570049 5.3:-14116254 MS.gene64891:CDS
CCTTCCGGGGCATCTTTCCG+AGG 0.576947 5.3:+14113482 None:intergenic
CGATGGGTCCCCATCAGCAA+TGG 0.578011 5.3:+14114885 None:intergenic
TTCTTCTTCATCAGGATCGG+AGG 0.578889 5.3:-14116326 MS.gene64891:CDS
ACAAGGTTATAGCGAGGATG+AGG 0.579359 5.3:-14114197 MS.gene64891:intron
AAGGATTACTTTGACCGGCA+TGG 0.580864 5.3:-14113359 MS.gene64891:CDS
ACTGTGGAAAAGGTTAATGT+TGG 0.582824 5.3:-14113119 MS.gene64891:CDS
ATCAAATACAGCCATTACAA+AGG 0.586492 5.3:-14114754 MS.gene64891:CDS
ATTCATTGCAGTTCAGCCAG+GGG 0.586651 5.3:+14113171 None:intergenic
AGGATCGGAGGAAGATGATG+AGG 0.592202 5.3:-14116314 MS.gene64891:CDS
GATCTAAAAGGGTCTTTGGA+AGG 0.592260 5.3:+14114601 None:intergenic
GTCGCTGATCAATTCGCGGG+TGG 0.594980 5.3:-14116250 MS.gene64891:CDS
AAGGGCAGCCTGAACAAACT+CGG 0.595404 5.3:+14114930 None:intergenic
TCGCTGATCAATTCGCGGGT+GGG 0.599945 5.3:-14116249 MS.gene64891:CDS
ATTGATAACTTTAAGCACAC+AGG 0.601668 5.3:-14114838 MS.gene64891:CDS
TGTAAATAACATATCTCCAG+TGG 0.603326 5.3:+14114234 None:intergenic
CGGACTGAGGGAAACACAAA+CGG 0.603582 5.3:-14114556 MS.gene64891:CDS
TTTCAGGCTTTAAGTCTGTG+TGG 0.603818 5.3:+14114650 None:intergenic
AAATCAAGGTAGGAAAGTGA+AGG 0.604919 5.3:-14113082 None:intergenic
GCTCAGAGGAAACTTGGTTG+GGG 0.605080 5.3:-14116217 MS.gene64891:CDS
AATTGGTGGAGCTCAATCCA+AGG 0.608972 5.3:-14113378 MS.gene64891:CDS
ATGGTATCCACCTTTCCGAT+AGG 0.609356 5.3:+14116282 None:intergenic
AGTCTAGTAGAAATATCGAC+GGG 0.609550 5.3:-14114426 MS.gene64891:CDS
AAATGGGCAGCACCATTGCA+TGG 0.610699 5.3:-14114812 MS.gene64891:CDS
AGAGTCGCTGATCAATTCGC+GGG 0.611441 5.3:-14116253 MS.gene64891:CDS
TTTGAGTCCTATCGGAAAGG+TGG 0.621569 5.3:-14116289 MS.gene64891:CDS
AAGTCTAGTAGAAATATCGA+CGG 0.621748 5.3:-14114427 MS.gene64891:CDS
AAAGAACGTTGATCTCGTGA+AGG 0.622147 5.3:+14114911 None:intergenic
GGGAGTGTACTCACCTTCCG+GGG 0.625406 5.3:+14113469 None:intergenic
AAGAACGTTGATCTCGTGAA+GGG 0.630667 5.3:+14114912 None:intergenic
AGTATCATAAGCAAGCCAAA+CGG 0.632450 5.3:+14116183 None:intergenic
GAAACTCAAGGACCATGCAA+TGG 0.636117 5.3:+14114800 None:intergenic
CCCAACTTTAGAACGGACTG+AGG 0.637641 5.3:-14114569 MS.gene64891:CDS
AGCAACCTTCAAATCAAGGT+AGG 0.638879 5.3:-14113092 MS.gene64891:CDS
GACTCTCCCCAACTTTAGAA+CGG 0.639593 5.3:-14114576 MS.gene64891:CDS
ATGTTATTTACACCCAAAGG+TGG 0.642360 5.3:-14114223 MS.gene64891:CDS
ATCATAAGCAAGCCAAACGG+TGG 0.646324 5.3:+14116186 None:intergenic
CCTCGGAAAGATGCCCCGGA+AGG 0.647925 5.3:-14113482 MS.gene64891:intron
GGATTTGAGTCCTATCGGAA+AGG 0.650525 5.3:-14116292 MS.gene64891:CDS
AGCTATCACCAAGAAACTCA+AGG 0.651636 5.3:+14114788 None:intergenic
GGATCGGAGGAAGATGATGA+GGG 0.654053 5.3:-14116313 MS.gene64891:CDS
GCCTTGATGATGGAACTCCT+CGG 0.654637 5.3:-14113499 MS.gene64891:CDS
ATTCCTCGTCTGTAGACATG+TGG 0.655799 5.3:-14114285 MS.gene64891:CDS
GATCAGCGACTCTAACAGCA+TGG 0.659062 5.3:+14116263 None:intergenic
ATAAGAAGAACATACAGAGG+TGG 0.667158 5.3:+14116159 None:intergenic
AATGAGAAATGAATCTACTG+TGG 0.670154 5.3:-14113135 MS.gene64891:CDS
CCAACTTTAGAACGGACTGA+GGG 0.670163 5.3:-14114568 MS.gene64891:CDS
AGACTTCAGTATAACTTCAG+GGG 0.688658 5.3:+14114312 None:intergenic
ACTGAGGGAAACACAAACGG+TGG 0.700333 5.3:-14114553 MS.gene64891:CDS
TGGTGGACAAGGTTATAGCG+AGG 0.709203 5.3:-14114203 MS.gene64891:CDS
TCTCAAAATCCAGAAAAGTG+CGG 0.715435 5.3:-14114953 MS.gene64891:CDS
GTGGGAGGTATATTGCTCAG+AGG 0.720598 5.3:-14116231 MS.gene64891:CDS
AGACCACATGTCTACAGACG+AGG 0.723587 5.3:+14114282 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCAAAAATATTCTATAT+GGG - chr5.3:14114318-14114337 MS.gene64891:CDS 10.0%
!!! ATAATTTTAAAAATTATCAC+TGG + chr5.3:14114387-14114406 None:intergenic 10.0%
!!! CAAATAATATAAGTTTTTAT+AGG + chr5.3:14115853-14115872 None:intergenic 10.0%
!! AAATTAGAAAAAGATATTAG+TGG + chr5.3:14114419-14114438 None:intergenic 15.0%
!! AATCATGAAAAACAAAAAAT+AGG + chr5.3:14113305-14113324 None:intergenic 15.0%
!! GATTTCAAAAATATTCTATA+TGG - chr5.3:14114317-14114336 MS.gene64891:CDS 15.0%
!!! AAACTTATATTATTTGTTAC+TGG - chr5.3:14115857-14115876 MS.gene64891:intron 15.0%
!!! ATTTGTAAATACATTTTGAT+TGG - chr5.3:14114713-14114732 MS.gene64891:CDS 15.0%
!!! CATTTCTAAAATAAATATTG+TGG - chr5.3:14115988-14116007 MS.gene64891:intron 15.0%
!!! TTTTTTTGTTATTGAATGAA+TGG - chr5.3:14113450-14113469 MS.gene64891:intron 15.0%
!! CATGATCATAAAAAGAATAA+AGG + chr5.3:14115769-14115788 None:intergenic 20.0%
!!! TAAATACATTTTGATTGGTT+TGG - chr5.3:14114718-14114737 MS.gene64891:CDS 20.0%
!!! TTTAAAAATTATCACTGGTT+GGG + chr5.3:14114382-14114401 None:intergenic 20.0%
!!! TTTTAAAAATTATCACTGGT+TGG + chr5.3:14114383-14114402 None:intergenic 20.0%
! AATTGGAATAGCTGAAAATT+GGG - chr5.3:14113556-14113575 MS.gene64891:intron 25.0%
! ACCATTAATAAAAAGAGACA+CGG - chr5.3:14115356-14115375 MS.gene64891:intron 25.0%
! ACGTTAGAAACAAATACATT+TGG - chr5.3:14113867-14113886 MS.gene64891:intron 25.0%
! ATCTCTCTAACTTTATTCAA+TGG + chr5.3:14114695-14114714 None:intergenic 25.0%
! ATTCCAATTCCAACAAAAAA+AGG + chr5.3:14113545-14113564 None:intergenic 25.0%
! ATTGGTGCAAATTAACAAAT+GGG - chr5.3:14114071-14114090 MS.gene64891:intron 25.0%
! ATTTGGTAGACATATTAGAA+TGG - chr5.3:14113884-14113903 MS.gene64891:intron 25.0%
! CATAAAAACTCTATCGTTTA+GGG + chr5.3:14115651-14115670 None:intergenic 25.0%
! CCAACAAAAAAAGGAATTAT+CGG + chr5.3:14113536-14113555 None:intergenic 25.0%
! CTTAAATTGTTGTATGCAAA+AGG - chr5.3:14115728-14115747 MS.gene64891:intron 25.0%
! CTTCATTAACTTAATCAAGA+TGG - chr5.3:14114213-14114232 MS.gene64891:CDS 25.0%
! GAAACTTTGAATTTCATTCT+CGG + chr5.3:14115682-14115701 None:intergenic 25.0%
! GACAAAAACAATGTAACATA+AGG + chr5.3:14113610-14113629 None:intergenic 25.0%
! GATTCATTTCTCATTTCATT+TGG + chr5.3:14116279-14116298 None:intergenic 25.0%
! GCTTAAAGTTATCAATCAAT+TGG + chr5.3:14114577-14114596 None:intergenic 25.0%
! GGTTTAATATGTGAAAAAAC+TGG - chr5.3:14115315-14115334 MS.gene64891:intron 25.0%
! TATTATGTTTGACCTATGTT+TGG - chr5.3:14113933-14113952 MS.gene64891:intron 25.0%
! TATTGGTGCAAATTAACAAA+TGG - chr5.3:14114070-14114089 MS.gene64891:intron 25.0%
! TCATAAAAACTCTATCGTTT+AGG + chr5.3:14115652-14115671 None:intergenic 25.0%
! TTTGGTAGACATATTAGAAT+GGG - chr5.3:14113885-14113904 MS.gene64891:intron 25.0%
!! CTTTTTATGATCATGTTGAA+GGG - chr5.3:14115774-14115793 MS.gene64891:intron 25.0%
!! GAAAATAGAAGAATGTTTTC+AGG + chr5.3:14114788-14114807 None:intergenic 25.0%
!! TCTTTTTATGATCATGTTGA+AGG - chr5.3:14115773-14115792 MS.gene64891:intron 25.0%
!! TTTTTCATGATTTTCACATG+TGG - chr5.3:14113313-14113332 MS.gene64891:CDS 25.0%
!!! ATTCCTTTTTTTGTTGGAAT+TGG - chr5.3:14113539-14113558 MS.gene64891:intron 25.0%
!!! ATTTTTCTAGTAAACTGTTG+TGG - chr5.3:14115252-14115271 MS.gene64891:intron 25.0%
!!! GACAATTGGTTTGTTTTATT+TGG - chr5.3:14114166-14114185 MS.gene64891:intron 25.0%
!!! TTACAAGTCTTATTGAGAAA+AGG - chr5.3:14114891-14114910 MS.gene64891:CDS 25.0%
!!! TTGTTTGTTATGTTTTGTGT+AGG - chr5.3:14113381-14113400 MS.gene64891:CDS 25.0%
!!! TTTTTTTGCTGTCAAGATTT+AGG - chr5.3:14113767-14113786 MS.gene64891:intron 25.0%
AAACAATGTAACATAAGGTC+AGG + chr5.3:14113605-14113624 None:intergenic 30.0%
AAATGAATCTACTGTGGAAA+AGG - chr5.3:14116290-14116309 MS.gene64891:CDS 30.0%
AACACACATTGAACAAAAGA+AGG + chr5.3:14113500-14113519 None:intergenic 30.0%
AAGACAATTATTCTCATTCC+CGG + chr5.3:14113713-14113732 None:intergenic 30.0%
AAGACTTGTGATACCATAAA+TGG - chr5.3:14113807-14113826 MS.gene64891:intron 30.0%
AAGTCTAGTAGAAATATCGA+CGG - chr5.3:14114992-14115011 MS.gene64891:intron 30.0%
AATGAGAAATGAATCTACTG+TGG - chr5.3:14116284-14116303 MS.gene64891:CDS 30.0%
ACAACAAACTTTGAATTCGA+TGG + chr5.3:14114554-14114573 None:intergenic 30.0%
AGTATAAGAAGAACATACAG+AGG + chr5.3:14113266-14113285 None:intergenic 30.0%
ATATTAAAACAACAGTCTCC+TGG - chr5.3:14114240-14114259 MS.gene64891:CDS 30.0%
ATCAAATACAGCCATTACAA+AGG - chr5.3:14114665-14114684 MS.gene64891:CDS 30.0%
ATGAGAAATTGTTCAAAACC+AGG + chr5.3:14115617-14115636 None:intergenic 30.0%
ATGGGATGAAACATAATACT+AGG - chr5.3:14113903-14113922 MS.gene64891:intron 30.0%
ATTGAAGTGTATCCAAACAT+AGG + chr5.3:14113948-14113967 None:intergenic 30.0%
ATTTATGGTATCACAAGTCT+TGG + chr5.3:14113808-14113827 None:intergenic 30.0%
CAACAAACTTTGAATTCGAT+GGG + chr5.3:14114553-14114572 None:intergenic 30.0%
CATGTACCATTTATGTTTGT+TGG - chr5.3:14113682-14113701 MS.gene64891:intron 30.0%
CCATTAATAAAAAGAGACAC+GGG - chr5.3:14115357-14115376 MS.gene64891:intron 30.0%
GAATTGGAATAGCTGAAAAT+TGG - chr5.3:14113555-14113574 MS.gene64891:intron 30.0%
GGATATTAATCTTAGCAACA+GGG + chr5.3:14114266-14114285 None:intergenic 30.0%
GTACTAAATAATATGTGTCC+TGG - chr5.3:14115596-14115615 MS.gene64891:intron 30.0%
GTACTTCCAACAAACATAAA+TGG + chr5.3:14113691-14113710 None:intergenic 30.0%
TAGGTTCTATAGAAATAGCA+TGG + chr5.3:14115834-14115853 None:intergenic 30.0%
TAGGTTTACTAGCTCAAATT+TGG - chr5.3:14113400-14113419 MS.gene64891:intron 30.0%
TGAGAATAATTGTCTTTCTC+AGG - chr5.3:14113717-14113736 MS.gene64891:intron 30.0%
TGGATATTAATCTTAGCAAC+AGG + chr5.3:14114267-14114286 None:intergenic 30.0%
TGGGATGAAACATAATACTA+GGG - chr5.3:14113904-14113923 MS.gene64891:intron 30.0%
TGTAAATAACATATCTCCAG+TGG + chr5.3:14115188-14115207 None:intergenic 30.0%
TTGTAGCTTCTCAAAAATCA+CGG + chr5.3:14113993-14114012 None:intergenic 30.0%
! ATTGATAACTTTAAGCACAC+AGG - chr5.3:14114581-14114600 MS.gene64891:CDS 30.0%
! GATATGTTATTTACACCCAA+AGG - chr5.3:14115193-14115212 MS.gene64891:intron 30.0%
! TTTATGTTTGTTGGAAGTAC+CGG - chr5.3:14113691-14113710 MS.gene64891:intron 30.0%
!! AAGATTTAGGAGCCATTTTA+TGG - chr5.3:14113780-14113799 MS.gene64891:intron 30.0%
!!! AGGAGACTGTTGTTTTAATA+TGG + chr5.3:14114241-14114260 None:intergenic 30.0%
!!! CCGATAATTCCTTTTTTTGT+TGG - chr5.3:14113533-14113552 MS.gene64891:intron 30.0%
AAATGAAACATGCTGACAGT+GGG + chr5.3:14115973-14115992 None:intergenic 35.0%
AATCCAAGGATTACTTTGAC+CGG - chr5.3:14116055-14116074 MS.gene64891:intron 35.0%
ACAACTTCAATTGAAGGAAG+AGG - chr5.3:14114959-14114978 MS.gene64891:CDS 35.0%
ACGTGAAGAAAAGATGAACT+TGG + chr5.3:14114287-14114306 None:intergenic 35.0%
ACTGTGGAAAAGGTTAATGT+TGG - chr5.3:14116300-14116319 MS.gene64891:CDS 35.0%
AGACTTCAGTATAACTTCAG+GGG + chr5.3:14115110-14115129 None:intergenic 35.0%
AGAGAACAAAACAGGACAAT+TGG - chr5.3:14114152-14114171 MS.gene64891:intron 35.0%
AGTATCATAAGCAAGCCAAA+CGG + chr5.3:14113239-14113258 None:intergenic 35.0%
AGTCTAGTAGAAATATCGAC+GGG - chr5.3:14114993-14115012 MS.gene64891:intron 35.0%
ATAAGAAGAACATACAGAGG+TGG + chr5.3:14113263-14113282 None:intergenic 35.0%
CAAGTCTTGGATCCATAAAA+TGG + chr5.3:14113795-14113814 None:intergenic 35.0%
CAGACTTCAGTATAACTTCA+GGG + chr5.3:14115111-14115130 None:intergenic 35.0%
GAATAGCTGAAAATTGGGAA+TGG - chr5.3:14113561-14113580 MS.gene64891:intron 35.0%
GATGAAACATAATACTAGGG+GGG - chr5.3:14113907-14113926 MS.gene64891:intron 35.0%
GATTACTTGCATAGTGAACT+TGG - chr5.3:14114740-14114759 MS.gene64891:CDS 35.0%
GGAAGAACAACTTCAATTGA+AGG - chr5.3:14114953-14114972 MS.gene64891:CDS 35.0%
GGATGAAACATAATACTAGG+GGG - chr5.3:14113906-14113925 MS.gene64891:intron 35.0%
GGGATGAAACATAATACTAG+GGG - chr5.3:14113905-14113924 MS.gene64891:intron 35.0%
GTGATCTAAAAAGGATTCGT+AGG - chr5.3:14116082-14116101 MS.gene64891:intron 35.0%
TAAATGGCACGAGTTAATGT+AGG - chr5.3:14113823-14113842 MS.gene64891:intron 35.0%
TATATTGCTCAGAGGAAACT+TGG - chr5.3:14113196-14113215 MS.gene64891:CDS 35.0%
TATGAGCAACCTTCAAATCA+AGG - chr5.3:14116323-14116342 MS.gene64891:CDS 35.0%
TCAATCAGCAATTTGTCAAG+TGG + chr5.3:14116120-14116139 None:intergenic 35.0%
TCAATGGAAGACCTTTGTAA+TGG + chr5.3:14114679-14114698 None:intergenic 35.0%
TCTCAAAATCCAGAAAAGTG+CGG - chr5.3:14114466-14114485 MS.gene64891:CDS 35.0%
TGATCATGTTGAAGGGAAAA+TGG - chr5.3:14115781-14115800 MS.gene64891:intron 35.0%
TTCTTTCAACCATTGCTGAT+GGG - chr5.3:14114525-14114544 MS.gene64891:CDS 35.0%
TTGTTCTTCTTCATCAGGAT+CGG - chr5.3:14113090-14113109 MS.gene64891:CDS 35.0%
! ACTTTCCTACCTTGATTTGA+AGG + chr5.3:14116335-14116354 None:intergenic 35.0%
! ATGTCTTGTTCTTCTTCATC+AGG - chr5.3:14113085-14113104 MS.gene64891:CDS 35.0%
! ATGTTATTTACACCCAAAGG+TGG - chr5.3:14115196-14115215 MS.gene64891:intron 35.0%
! ATTCTTTTATAGCCCATGTG+AGG - chr5.3:14115570-14115589 MS.gene64891:intron 35.0%
! CCCGTGTCTCTTTTTATTAA+TGG + chr5.3:14115360-14115379 None:intergenic 35.0%
! GAGTGAAAGTGTAAAACAAG+TGG - chr5.3:14114099-14114118 MS.gene64891:intron 35.0%
! TATGGTTAACGAGTTTTCAG+AGG - chr5.3:14115294-14115313 MS.gene64891:intron 35.0%
! TTCTTTTATAGCCCATGTGA+GGG - chr5.3:14115571-14115590 MS.gene64891:intron 35.0%
!! ACATTAACTCGTGCCATTTA+TGG + chr5.3:14113823-14113842 None:intergenic 35.0%
!! TACAACTTGTAGCTTTGAAG+TGG - chr5.3:14114008-14114027 MS.gene64891:intron 35.0%
!! TGATAGTGTGAAAAGTGTCA+GGG - chr5.3:14115506-14115525 MS.gene64891:intron 35.0%
!! TTATGTTTGTTGGAAGTACC+GGG - chr5.3:14113692-14113711 MS.gene64891:intron 35.0%
!! TTGATAGTGTGAAAAGTGTC+AGG - chr5.3:14115505-14115524 MS.gene64891:intron 35.0%
!! TTGTCCTGTTTTGTTCTCTT+TGG + chr5.3:14114151-14114170 None:intergenic 35.0%
!!! AGATGCAAGATTGTCGATTT+TGG - chr5.3:14115025-14115044 MS.gene64891:intron 35.0%
AAAGAACGTTGATCTCGTGA+AGG + chr5.3:14114511-14114530 None:intergenic 40.0%
AAGAACGTTGATCTCGTGAA+GGG + chr5.3:14114510-14114529 None:intergenic 40.0%
AGCAACCTTCAAATCAAGGT+AGG - chr5.3:14116327-14116346 MS.gene64891:CDS 40.0%
AGCTATCACCAAGAAACTCA+AGG + chr5.3:14114634-14114653 None:intergenic 40.0%
ATGAGGGATTTGAGTCCTAT+CGG - chr5.3:14113122-14113141 MS.gene64891:CDS 40.0%
ATGATCCTGAAATCAGCACA+AGG + chr5.3:14115897-14115916 None:intergenic 40.0%
ATTTAGTACCTCCCTCACAT+GGG + chr5.3:14115585-14115604 None:intergenic 40.0%
CACAGAAACAAACAGGCTAT+TGG - chr5.3:14114053-14114072 MS.gene64891:intron 40.0%
CCAGACTTCAGTATAACTTC+AGG + chr5.3:14115112-14115131 None:intergenic 40.0%
CCTGAAGTTATACTGAAGTC+TGG - chr5.3:14115109-14115128 MS.gene64891:intron 40.0%
CGAACCAAAGAGAACAAAAC+AGG - chr5.3:14114144-14114163 MS.gene64891:intron 40.0%
CGTGCAGTTGCTAAAATATC+GGG - chr5.3:14114932-14114951 MS.gene64891:CDS 40.0%
GAAATGAAACATGCTGACAG+TGG + chr5.3:14115974-14115993 None:intergenic 40.0%
GATCTAAAAGGGTCTTTGGA+AGG + chr5.3:14114821-14114840 None:intergenic 40.0%
GCGTGCAGTTGCTAAAATAT+CGG - chr5.3:14114931-14114950 MS.gene64891:CDS 40.0%
GTTCTTTCAACCATTGCTGA+TGG - chr5.3:14114524-14114543 MS.gene64891:CDS 40.0%
TATTTAGTACCTCCCTCACA+TGG + chr5.3:14115586-14115605 None:intergenic 40.0%
TCTGGCGCAAAATCAAAAAG+TGG + chr5.3:14116195-14116214 None:intergenic 40.0%
TCTTTCAACCATTGCTGATG+GGG - chr5.3:14114526-14114545 MS.gene64891:CDS 40.0%
TGTGGCATATCTAATGCTTG+TGG - chr5.3:14116006-14116025 MS.gene64891:intron 40.0%
TTAAGCACACAGGTCCAAAT+GGG - chr5.3:14114591-14114610 MS.gene64891:CDS 40.0%
TTATTTACACCCAAAGGTGG+TGG - chr5.3:14115199-14115218 MS.gene64891:intron 40.0%
TTTAAGCACACAGGTCCAAA+TGG - chr5.3:14114590-14114609 MS.gene64891:CDS 40.0%
! CTTTGGTTCGATATTCTCAG+TGG + chr5.3:14114134-14114153 None:intergenic 40.0%
! TCCAAAGACCCTTTTAGATC+CGG - chr5.3:14114821-14114840 MS.gene64891:CDS 40.0%
! TCCTTTTTAGATCACCATGC+CGG + chr5.3:14116077-14116096 None:intergenic 40.0%
! TGTGGATTGCAGATTGCAAT+TGG - chr5.3:14116024-14116043 MS.gene64891:intron 40.0%
!! AATGTCCTTGTGCTGATTTC+AGG - chr5.3:14115889-14115908 MS.gene64891:intron 40.0%
!! CAATAGCCTGTTTGTTTCTG+TGG + chr5.3:14114055-14114074 None:intergenic 40.0%
!! CGATTTTGGAAATGCGTGTT+GGG - chr5.3:14115039-14115058 MS.gene64891:intron 40.0%
!! GTCAGGTTTTGTGAATTGTG+AGG + chr5.3:14113588-14113607 None:intergenic 40.0%
!! TCGATTTTGGAAATGCGTGT+TGG - chr5.3:14115038-14115057 MS.gene64891:intron 40.0%
!! TTTCAGGCTTTAAGTCTGTG+TGG + chr5.3:14114772-14114791 None:intergenic 40.0%
AAGGATTACTTTGACCGGCA+TGG - chr5.3:14116060-14116079 MS.gene64891:intron 45.0%
AATTGGTGGAGCTCAATCCA+AGG - chr5.3:14116041-14116060 MS.gene64891:intron 45.0%
ACAAGGTTATAGCGAGGATG+AGG - chr5.3:14115222-14115241 MS.gene64891:intron 45.0%
ACCGGCATGGTGATCTAAAA+AGG - chr5.3:14116073-14116092 MS.gene64891:intron 45.0%
ATAACCTTGTCCACCACCTT+TGG + chr5.3:14115212-14115231 None:intergenic 45.0%
ATCATAAGCAAGCCAAACGG+TGG + chr5.3:14113236-14113255 None:intergenic 45.0%
ATGCCGGTCAAAGTAATCCT+TGG + chr5.3:14116061-14116080 None:intergenic 45.0%
ATGGTATCCACCTTTCCGAT+AGG + chr5.3:14113140-14113159 None:intergenic 45.0%
ATTCATTGCAGTTCAGCCAG+GGG + chr5.3:14116251-14116270 None:intergenic 45.0%
ATTCCTCGTCTGTAGACATG+TGG - chr5.3:14115134-14115153 MS.gene64891:intron 45.0%
CAGAAAAACGACCAACTGCA+CGG - chr5.3:14116211-14116230 MS.gene64891:CDS 45.0%
GAAACTCAAGGACCATGCAA+TGG + chr5.3:14114622-14114641 None:intergenic 45.0%
GATTCATTGCAGTTCAGCCA+GGG + chr5.3:14116252-14116271 None:intergenic 45.0%
GGATCATCTTGCCTTGATGA+TGG - chr5.3:14115910-14115929 MS.gene64891:intron 45.0%
GGATTGCAGATTGCAATTGG+TGG - chr5.3:14116027-14116046 MS.gene64891:intron 45.0%
GGATTTGAGTCCTATCGGAA+AGG - chr5.3:14113127-14113146 MS.gene64891:CDS 45.0%
TAACCTTGTCCACCACCTTT+GGG + chr5.3:14115211-14115230 None:intergenic 45.0%
TAGAGTCGCTGATCAATTCG+CGG - chr5.3:14113165-14113184 MS.gene64891:CDS 45.0%
TCCGGATCTAAAAGGGTCTT+TGG + chr5.3:14114825-14114844 None:intergenic 45.0%
TGATTCATTGCAGTTCAGCC+AGG + chr5.3:14116253-14116272 None:intergenic 45.0%
TGCATGGTCCTTGAGTTTCT+TGG - chr5.3:14114623-14114642 MS.gene64891:CDS 45.0%
TGCTCAGAGGAAACTTGGTT+GGG - chr5.3:14113201-14113220 MS.gene64891:CDS 45.0%
TTAATCTTAGCAACAGGGCC+AGG + chr5.3:14114261-14114280 None:intergenic 45.0%
TTCTTCTTCATCAGGATCGG+AGG - chr5.3:14113093-14113112 MS.gene64891:CDS 45.0%
TTGCTCAGAGGAAACTTGGT+TGG - chr5.3:14113200-14113219 MS.gene64891:CDS 45.0%
TTTGAGTCCTATCGGAAAGG+TGG - chr5.3:14113130-14113149 MS.gene64891:CDS 45.0%
! GACTCTCCCCAACTTTAGAA+CGG - chr5.3:14114843-14114862 MS.gene64891:CDS 45.0%
! TTTTATAGCCCATGTGAGGG+AGG - chr5.3:14115574-14115593 MS.gene64891:intron 45.0%
!! AGCCTGTTTGTTTCTGTGGT+GGG + chr5.3:14114051-14114070 None:intergenic 45.0%
!! CCAACTTTAGAACGGACTGA+GGG - chr5.3:14114851-14114870 MS.gene64891:CDS 45.0%
!! CCTCAGTCCGTTCTAAAGTT+GGG + chr5.3:14114853-14114872 None:intergenic 45.0%
!! CTCAGTCCGTTCTAAAGTTG+GGG + chr5.3:14114852-14114871 None:intergenic 45.0%
!! TAGCCTGTTTGTTTCTGTGG+TGG + chr5.3:14114052-14114071 None:intergenic 45.0%
!! TTCTAAAGTTGGGGAGAGTC+CGG + chr5.3:14114843-14114862 None:intergenic 45.0%
!!! TTAAATTTGATTTAATAATA+TGG - chr5.3:14115276-14115295 MS.gene64891:intron 5.0%
AAATCACGGCCAACTTGCGT+TGG + chr5.3:14113979-14113998 None:intergenic 50.0%
AAATGGGCAGCACCATTGCA+TGG - chr5.3:14114607-14114626 MS.gene64891:CDS 50.0%
AAGGGCAGCCTGAACAAACT+CGG + chr5.3:14114492-14114511 None:intergenic 50.0%
AATCACGGCCAACTTGCGTT+GGG + chr5.3:14113978-14113997 None:intergenic 50.0%
ACTGAGGGAAACACAAACGG+TGG - chr5.3:14114866-14114885 MS.gene64891:CDS 50.0%
AGACCACATGTCTACAGACG+AGG + chr5.3:14115140-14115159 None:intergenic 50.0%
AGAGTCGCTGATCAATTCGC+GGG - chr5.3:14113166-14113185 MS.gene64891:CDS 50.0%
AGGATCGGAGGAAGATGATG+AGG - chr5.3:14113105-14113124 MS.gene64891:CDS 50.0%
ATTGCTTTCGAGCTTGCCAC+TGG - chr5.3:14115169-14115188 MS.gene64891:intron 50.0%
CGGACTGAGGGAAACACAAA+CGG - chr5.3:14114863-14114882 MS.gene64891:CDS 50.0%
CTCCCACCACAGAAACAAAC+AGG - chr5.3:14114046-14114065 MS.gene64891:intron 50.0%
GATCAGCGACTCTAACAGCA+TGG + chr5.3:14113159-14113178 None:intergenic 50.0%
GCTCAGAGGAAACTTGGTTG+GGG - chr5.3:14113202-14113221 MS.gene64891:CDS 50.0%
GGATCGGAGGAAGATGATGA+GGG - chr5.3:14113106-14113125 MS.gene64891:CDS 50.0%
GGGAGAGTCCGGATCTAAAA+GGG + chr5.3:14114832-14114851 None:intergenic 50.0%
TACCACATCCCAACGCAAGT+TGG - chr5.3:14113967-14113986 MS.gene64891:intron 50.0%
TCCGAGGAGTTCCATCATCA+AGG + chr5.3:14115924-14115943 None:intergenic 50.0%
! GTGGGAGGTATATTGCTCAG+AGG - chr5.3:14113188-14113207 MS.gene64891:CDS 50.0%
! TGGTGGACAAGGTTATAGCG+AGG - chr5.3:14115216-14115235 MS.gene64891:intron 50.0%
!! ATGCAATGGTGCTGCCCATT+TGG + chr5.3:14114608-14114627 None:intergenic 50.0%
!! CCCAACTTTAGAACGGACTG+AGG - chr5.3:14114850-14114869 MS.gene64891:CDS 50.0%
!! CCCTCAGTCCGTTCTAAAGT+TGG + chr5.3:14114854-14114873 None:intergenic 50.0%
!! CTGTTTGTTTCTGTGGTGGG+AGG + chr5.3:14114048-14114067 None:intergenic 50.0%
!! GCCTTGATGATGGAACTCCT+CGG - chr5.3:14115920-14115939 MS.gene64891:intron 50.0%
!!! CGTGCAGTTGGTCGTTTTTC+TGG + chr5.3:14116213-14116232 None:intergenic 50.0%
AACTCCTCGGAAAGATGCCC+CGG - chr5.3:14115933-14115952 MS.gene64891:intron 55.0%
GGGGAGAGTCCGGATCTAAA+AGG + chr5.3:14114833-14114852 None:intergenic 55.0%
GGGGTCAATTCTCCACCGTT+TGG - chr5.3:14113221-14113240 MS.gene64891:CDS 55.0%
TCGCTGATCAATTCGCGGGT+GGG - chr5.3:14113170-14113189 MS.gene64891:CDS 55.0%
! AAGTGCGGCCGAGTTTGTTC+AGG - chr5.3:14114481-14114500 MS.gene64891:CDS 55.0%
! CAAACTCGGCCGCACTTTTC+TGG + chr5.3:14114478-14114497 None:intergenic 55.0%
! GTGGGAGTGTACTCACCTTC+CGG + chr5.3:14115955-14115974 None:intergenic 55.0%
! TGCAGGTATTGCCGTGCAGT+TGG + chr5.3:14116225-14116244 None:intergenic 55.0%
! TGGGAGTGTACTCACCTTCC+GGG + chr5.3:14115954-14115973 None:intergenic 55.0%
!! ACACCCAAAGGTGGTGGACA+AGG - chr5.3:14115205-14115224 MS.gene64891:intron 55.0%
CGATGGGTCCCCATCAGCAA+TGG + chr5.3:14114537-14114556 None:intergenic 60.0%
CTGATCAATTCGCGGGTGGG+AGG - chr5.3:14113173-14113192 MS.gene64891:CDS 60.0%
GGCAATACCTGCAACACCCC+TGG - chr5.3:14116232-14116251 MS.gene64891:CDS 60.0%
GGCCAACTTGCGTTGGGATG+TGG + chr5.3:14113972-14113991 None:intergenic 60.0%
GTCGCTGATCAATTCGCGGG+TGG - chr5.3:14113169-14113188 MS.gene64891:CDS 60.0%
! GGGAGTGTACTCACCTTCCG+GGG + chr5.3:14115953-14115972 None:intergenic 60.0%
!! AGTTCAGCCAGGGGTGTTGC+AGG + chr5.3:14116242-14116261 None:intergenic 60.0%
CCTCGGAAAGATGCCCCGGA+AGG - chr5.3:14115937-14115956 MS.gene64891:intron 65.0%
! CCTTCCGGGGCATCTTTCCG+AGG + chr5.3:14115940-14115959 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 14113085 14116356 14113085 ID=MS.gene64891
chr5.3 mRNA 14113085 14116356 14113085 ID=MS.gene64891.t1;Parent=MS.gene64891
chr5.3 exon 14116174 14116356 14116174 ID=MS.gene64891.t1.exon1;Parent=MS.gene64891.t1
chr5.3 CDS 14116174 14116356 14116174 ID=cds.MS.gene64891.t1;Parent=MS.gene64891.t1
chr5.3 exon 14114198 14114986 14114198 ID=MS.gene64891.t1.exon2;Parent=MS.gene64891.t1
chr5.3 CDS 14114198 14114986 14114198 ID=cds.MS.gene64891.t1;Parent=MS.gene64891.t1
chr5.3 exon 14113483 14113530 14113483 ID=MS.gene64891.t1.exon3;Parent=MS.gene64891.t1
chr5.3 CDS 14113483 14113530 14113483 ID=cds.MS.gene64891.t1;Parent=MS.gene64891.t1
chr5.3 exon 14113085 14113405 14113085 ID=MS.gene64891.t1.exon4;Parent=MS.gene64891.t1
chr5.3 CDS 14113085 14113405 14113085 ID=cds.MS.gene64891.t1;Parent=MS.gene64891.t1
Gene Sequence

>MS.gene64891

ATGTCTTGTTCTTCTTCATCAGGATCGGAGGAAGATGATGAGGGATTTGAGTCCTATCGGAAAGGTGGATACCATGCTGTTAGAGTCGCTGATCAATTCGCGGGTGGGAGGTATATTGCTCAGAGGAAACTTGGTTGGGGTCAATTCTCCACCGTTTGGCTTGCTTATGATACTACCACCTCTGTATGTTCTTCTTATACTTTTGTTTTCAATTCAACCTATTTTTTGTTTTTCATGATTTTCACATGTGGTTCATGTTTTAGATTTGAAAGTTTTTTTCTTTGTTTTGTTTATGATTGTTTGTTATGTTTTGTGTAGGTTTACTAGCTCAAATTTGGTTGATTTGTTTGTTTAATGATGTTTTTTTTTTTTGTTATTGAATGAATGGATCTAATTCAGATTTTTTTTTCTTCCTTCTTTTGTTCAATGTGTGTTACAATTACAAATTCCGATAATTCCTTTTTTTGTTGGAATTGGAATAGCTGAAAATTGGGAATGGTCCTCACAATTCACAAAACCTGACCTTATGTTACATTGTTTTTGTCTTTATGTACAAAAGCAATAAATGTGTCTTTTATATCAAATCTAACACATGTACATGTACCATTTATGTTTGTTGGAAGTACCGGGAATGAGAATAATTGTCTTTCTCAGGTTAATTTTTGATTCAGTAGTTTTTTTGTTTTTTTGCTGTCAAGATTTAGGAGCCATTTTATGGATCCAAGACTTGTGATACCATAAATGGCACGAGTTAATGTAGGATCTTTCTAGTGTTTGAATTGACGTTAGAAACAAATACATTTGGTAGACATATTAGAATGGGATGAAACATAATACTAGGGGGGCTATATTATGTTTGACCTATGTTTGGATACACTTCAATACCACATCCCAACGCAAGTTGGCCGTGATTTTTGAGAAGCTACAACTTGTAGCTTTGAAGTGGATGCGAGTTTAACTCCTCCCACCACAGAAACAAACAGGCTATTGGTGCAAATTAACAAATGGGACACAGAGTGAAAGTGTAAAACAAGTGGTACTCAATTCCACTGAGAATATCGAACCAAAGAGAACAAAACAGGACAATTGGTTTGTTTTATTTGGTTGCTATGTGTTACTTACATCACTCTTCATTAACTTAATCAAGATGGTTCCATATTAAAACAACAGTCTCCTGGCCCTGTTGCTAAGATTAATATCCAAGTTCATCTTTTCTTCACGTATTTATGTTTGATTTCAAAAATATTCTATATGGGTAAACAATTATGAGTGTGCATGTATTGCTTTGTGTTTGCCCAACCAGTGATAATTTTTAAAATTATTTTTGCGCACCACTAATATCTTTTTCTAATTTTTTGTTTTTTTTTCAGTCATACGTTGCTCTCAAAATCCAGAAAAGTGCGGCCGAGTTTGTTCAGGCTGCCCTTCACGAGATCAACGTTCTTTCAACCATTGCTGATGGGGACCCATCGAATTCAAAGTTTGTTGTCCAATTGATTGATAACTTTAAGCACACAGGTCCAAATGGGCAGCACCATTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGTTTGATCAAATACAGCCATTACAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGTAAATACATTTTGATTGGTTTGGATTACTTGCATAGTGAACTTGGTATAATCCACACAGACTTAAAGCCTGAAAACATTCTTCTATTTTCAACTATTGATCCTTCCAAAGACCCTTTTAGATCCGGACTCTCCCCAACTTTAGAACGGACTGAGGGAAACACAAACGGTGGACTTACAAGTCTTATTGAGAAAAGGCTGAAGAGAAGAGCAAAGCGTGCAGTTGCTAAAATATCGGGAAGAACAACTTCAATTGAAGGAAGAGGAGAAGCTGCAAAGTCTAGTAGAAATATCGACGGGATTGATGTGAGATGCAAGATTGTCGATTTTGGAAATGCGTGTTGGGCTGATAACAAGTTTGCAGAAGAAATACAGACAAGACAATATAGAGCCCCTGAAGTTATACTGAAGTCTGGTTATTCCTCGTCTGTAGACATGTGGTCTTTTGCTTGCATTGCTTTCGAGCTTGCCACTGGAGATATGTTATTTACACCCAAAGGTGGTGGACAAGGTTATAGCGAGGATGAGGTATGCTGATTTTTCTAGTAAACTGTTGTGGTTTAAATTTGATTTAATAATATGGTTAACGAGTTTTCAGAGGTTTAATATGTGAAAAAACTGGTTTAATTAGCTCAATTACACCATTAATAAAAAGAGACACGGGCATATTTCATTGAATCAGCTTGTAATACTAATGCATAATATGCATTAGTTTAAATGTCTGATTAGTTTACAAACTTTCTACATGTTTTGATATGTACATTTTCATTTTTACTTAAGAAAATAGTTTTGATAGTGTGAAAAGTGTCAGGGATATCAGATTTTACTTCTATTCACTGTTTTATATATTTATGATTCTTTTATAGCCCATGTGAGGGAGGTACTAAATAATATGTGTCCTGGTTTTGAACAATTTCTCATCGTTTTTATTTCCCTAAACGATAGAGTTTTTATGATCTCAGACCGAGAATGAAATTCAAAGTTTCATGCTAGTGATCTATCATTGATAACTCTTAAATTGTTGTATGCAAAAGGCTATATATATTGTATCCTTTATTCTTTTTATGATCATGTTGAAGGGAAAATGGTCAAGATATATTTGTTTGCATTGAGTTCCATGCTATTTCTATAGAACCTATAAAAACTTATATTATTTGTTACTGGAATAATAAAAATGTCCTTGTGCTGATTTCAGGATCATCTTGCCTTGATGATGGAACTCCTCGGAAAGATGCCCCGGAAGGTGAGTACACTCCCACTGTCAGCATGTTTCATTTCTAAAATAAATATTGTGGCATATCTAATGCTTGTGGATTGCAGATTGCAATTGGTGGAGCTCAATCCAAGGATTACTTTGACCGGCATGGTGATCTAAAAAGGATTCGTAGGCTAAAATTTTGTCCACTTGACAAATTGCTGATTGATAGATATAAATTTTCAGCGAATGATGCTCAAGAGTTTTCAGAATTTCTTTTGCCACTTTTTGATTTTGCGCCAGAAAAACGACCAACTGCACGGCAATACCTGCAACACCCCTGGCTGAACTGCAATGAATCAGCGCCAAATGAAATGAGAAATGAATCTACTGTGGAAAAGGTTAATGTTGGTATGAGCAACCTTCAAATCAAGGTAGGAAAGTGA
Protein sequence

>MS.gene64891.t1

MSCSSSSGSEEDDEGFESYRKGGYHAVRVADQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSSYVALKIQKSAAEFVQAALHEINVLSTIADGDPSNSKFVVQLIDNFKHTGPNGQHHCMVLEFLGDSLLRLIKYSHYKGLPLNKVREICKYILIGLDYLHSELGIIHTDLKPENILLFSTIDPSKDPFRSGLSPTLERTEGNTNGGLTSLIEKRLKRRAKRAVAKISGRTTSIEGRGEAAKSSRNIDGIDVRCKIVDFGNACWADNKFAEEIQTRQYRAPEVILKSGYSSSVDMWSFACIAFELATGDMLFTPKGGGQGYSEDEDHLALMMELLGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFCPLDKLLIDRYKFSANDAQEFSEFLLPLFDFAPEKRPTARQYLQHPWLNCNESAPNEMRNESTVEKVNVGMSNLQIKVGK