AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23814

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23814.t1 MTR_8g073250 98.876 445 2 1 1 445 1 442 0.0 910
MS.gene23814.t1 MTR_5g024270 82.287 446 78 1 1 445 1 446 0.0 746
MS.gene23814.t1 MTR_5g024270 84.548 343 52 1 1 342 1 343 0.0 586
MS.gene23814.t1 MTR_1g061690 48.456 518 189 6 2 441 8 525 2.46e-173 497
MS.gene23814.t1 MTR_4g056390 48.155 515 181 7 12 441 13 526 4.96e-167 481
MS.gene23814.t1 MTR_2g084555 46.014 276 126 3 183 441 253 522 2.40e-80 258
MS.gene23814.t1 MTR_2g084555 56.019 216 82 1 6 208 8 223 4.15e-79 255
MS.gene23814.t1 MTR_3g109390 29.426 418 218 13 5 413 27 376 6.08e-42 153
MS.gene23814.t1 MTR_3g109390 29.665 418 217 14 5 413 49 398 7.48e-40 147
MS.gene23814.t1 MTR_3g109390 29.904 418 214 15 5 413 49 396 1.75e-39 146
MS.gene23814.t1 MTR_3g076540 29.369 412 204 13 21 414 78 420 3.01e-39 146
MS.gene23814.t1 MTR_3g109390 30.053 376 194 11 47 413 70 385 1.35e-38 144
MS.gene23814.t1 MTR_3g076540 29.455 404 198 13 29 414 4 338 1.97e-38 142
MS.gene23814.t1 MTR_3g109390 30.053 376 194 11 47 413 92 407 3.49e-38 143
MS.gene23814.t1 MTR_4g104620 29.440 411 209 13 21 416 82 426 1.17e-37 142
MS.gene23814.t1 MTR_3g076540 29.306 389 189 12 44 414 1 321 1.70e-36 137
MS.gene23814.t1 MTR_3g076540 28.810 420 204 14 21 414 78 428 1.87e-36 139
MS.gene23814.t1 MTR_3g109390 30.199 351 177 11 5 355 49 331 9.21e-36 135
MS.gene23814.t1 MTR_4g104620 29.592 392 190 13 43 416 9 332 1.32e-35 134
MS.gene23814.t1 MTR_4g104620 29.412 391 190 13 44 416 1 323 5.24e-35 132
MS.gene23814.t1 MTR_3g086530 28.530 347 185 9 21 367 77 360 2.05e-33 129
MS.gene23814.t1 MTR_3g086530 28.530 347 185 9 21 367 77 360 4.45e-33 129
MS.gene23814.t1 MTR_3g086530 28.947 304 154 8 64 367 2 243 8.04e-29 115
MS.gene23814.t1 MTR_3g086530 29.021 286 153 7 21 306 77 312 4.42e-27 110
MS.gene23814.t1 MTR_3g086530 28.689 244 117 6 124 367 2 188 6.43e-21 92.0
MS.gene23814.t1 MTR_6g074905 32.143 168 100 5 252 413 1005 1164 4.85e-19 90.5
MS.gene23814.t1 MTR_0349s0030 32.143 168 100 5 252 413 125 284 1.99e-18 85.9
MS.gene23814.t1 MTR_5g082700 31.098 164 101 4 254 413 550 705 3.48e-18 87.8
MS.gene23814.t1 MTR_5g082700 32.258 155 96 3 29 179 394 543 2.34e-12 69.3
MS.gene23814.t1 MTR_8g070930 33.103 145 91 3 37 180 138 277 1.03e-17 86.3
MS.gene23814.t1 MTR_8g070930 39.815 108 58 3 254 360 285 386 1.26e-13 73.6
MS.gene23814.t1 MTR_1g111180 32.609 184 91 8 254 416 822 993 2.03e-13 73.2
MS.gene23814.t1 MTR_1g111180 30.233 172 101 5 11 177 657 814 2.50e-11 66.6
MS.gene23814.t1 MTR_1g111180 32.609 184 91 8 254 416 823 994 2.03e-13 73.2
MS.gene23814.t1 MTR_1g111180 30.233 172 101 5 11 177 658 815 2.48e-11 66.6
MS.gene23814.t1 MTR_5g082700 32.886 149 91 3 35 179 400 543 2.45e-12 69.3
MS.gene23814.t1 MTR_5g082700 32.886 149 91 3 35 179 400 543 2.47e-12 69.3
MS.gene23814.t1 MTR_6g074750 45.000 60 31 1 252 309 54 113 1.15e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23814.t1 AT4G35500 73.034 445 109 3 1 442 1 437 0.0 666
MS.gene23814.t1 AT2G17530 73.198 444 109 3 1 442 1 436 0.0 653
MS.gene23814.t1 AT2G17530 73.198 444 109 3 1 442 1 436 0.0 653
MS.gene23814.t1 AT4G35500 70.852 446 118 4 1 442 1 438 0.0 643
MS.gene23814.t1 AT2G17530 78.363 342 72 2 1 340 1 342 0.0 525
MS.gene23814.t1 AT3G53030 50.420 476 178 6 12 431 16 489 8.10e-168 482
MS.gene23814.t1 AT5G22840 49.476 477 184 4 4 428 11 482 1.14e-164 474
MS.gene23814.t1 AT3G44850 47.276 514 191 6 12 445 19 532 1.70e-162 469
MS.gene23814.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene23814.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene23814.t1 AT3G53570 29.676 401 218 10 21 413 99 443 3.41e-39 147
MS.gene23814.t1 AT4G32660 28.288 403 218 10 21 413 47 388 4.78e-39 145
MS.gene23814.t1 AT3G53570 29.676 401 218 10 21 413 85 429 5.30e-39 146
MS.gene23814.t1 AT3G53570 29.676 401 218 10 21 413 85 429 5.30e-39 146
MS.gene23814.t1 AT4G32660 28.288 403 218 10 21 413 55 396 6.83e-39 145
MS.gene23814.t1 AT4G24740 29.710 414 204 14 21 416 44 388 1.49e-38 144
MS.gene23814.t1 AT4G24740 29.227 414 206 13 21 416 82 426 4.75e-38 143
MS.gene23814.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene23814.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene23814.t1 AT4G24740 29.412 391 190 13 44 416 1 323 5.74e-36 135
MS.gene23814.t1 AT4G32660 28.657 335 180 8 21 355 55 330 3.97e-35 134
MS.gene23814.t1 AT4G24740 30.625 320 164 8 21 340 82 343 5.63e-34 130
MS.gene23814.t1 AT4G24740 31.313 297 147 8 44 340 1 240 7.27e-32 122
MS.gene23814.t1 AT4G32660 28.280 343 174 11 82 413 3 284 5.58e-30 118
MS.gene23814.t1 AT4G24740 30.420 286 147 7 21 306 82 315 6.65e-28 113
MS.gene23814.t1 AT1G73460 34.524 168 96 5 252 413 1001 1160 1.20e-21 98.6
MS.gene23814.t1 AT1G73460 34.524 168 96 5 252 413 1001 1160 1.20e-21 98.6
MS.gene23814.t1 AT1G73450 34.524 168 96 5 252 413 984 1143 1.34e-21 98.6
MS.gene23814.t1 AT2G40120 24.561 399 210 12 29 418 252 568 8.96e-21 95.5
MS.gene23814.t1 AT4G24740 29.630 270 110 10 165 416 13 220 3.00e-20 89.4
MS.gene23814.t1 AT4G24740 29.630 270 110 10 165 416 13 220 3.00e-20 89.4
MS.gene23814.t1 AT5G35980 31.111 180 110 6 12 185 94 265 6.90e-19 90.1
MS.gene23814.t1 AT5G35980 30.918 207 87 7 254 413 267 464 1.39e-14 76.6
MS.gene23814.t1 AT5G35980 32.667 150 95 3 37 185 121 265 1.05e-18 89.7
MS.gene23814.t1 AT5G35980 43.878 98 49 2 254 351 267 358 1.34e-14 76.6
MS.gene23814.t1 AT5G35980 31.111 180 110 6 12 185 59 230 1.14e-18 89.4
MS.gene23814.t1 AT5G35980 43.878 98 49 2 254 351 232 323 1.42e-14 76.6
MS.gene23814.t1 AT3G17750 32.143 168 100 5 252 413 970 1129 1.40e-17 86.3
MS.gene23814.t1 AT3G53640 31.148 183 96 6 254 416 470 642 2.14e-14 75.9
MS.gene23814.t1 AT1G13350 30.435 184 96 7 254 416 589 761 2.90e-13 72.4
MS.gene23814.t1 AT1G13350 30.814 172 100 5 11 177 424 581 6.90e-12 68.2
MS.gene23814.t1 AT1G13350 30.435 184 96 7 254 416 616 788 3.35e-13 72.4
MS.gene23814.t1 AT1G13350 30.814 172 100 5 11 177 451 608 7.53e-12 68.2
MS.gene23814.t1 AT1G13350 30.435 184 96 7 254 416 662 834 3.62e-13 72.4
MS.gene23814.t1 AT1G13350 30.814 172 100 5 11 177 497 654 8.88e-12 67.8
MS.gene23814.t1 AT3G25840 31.694 183 94 7 254 416 502 673 6.96e-13 71.2
MS.gene23814.t1 AT3G25840 31.720 186 90 9 254 416 764 935 8.61e-13 71.2

Find 125 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATATTTCTATCAGAATT+TGG 0.182704 8.4:+31032410 None:intergenic
ATGTCTTGTTCTTCTTCATC+TGG 0.217080 8.4:-31034025 MS.gene23814:CDS
GGATTCGGAGGCTAAAATTT+TGG 0.237408 8.4:-31031053 MS.gene23814:CDS
TTCTGGACAAAGAGCTTCTA+TGG 0.246761 8.4:-31032450 MS.gene23814:CDS
TTCTGCAGTTGGTCGCTTCT+CGG 0.258297 8.4:+31030936 None:intergenic
AGGGCGGTAGCTAAAATTTC+TGG 0.265940 8.4:-31032467 MS.gene23814:CDS
CCATGAGCCAAGGGTGTTGC+AGG 0.266108 8.4:+31030908 None:intergenic
AGATGCAAAGTGGTTGATTT+TGG 0.275568 8.4:-31032374 MS.gene23814:CDS
GTACATAGCTCAGAGGAAAT+TGG 0.318879 8.4:-31033915 MS.gene23814:CDS
CAGCATGGTATCCACCTTTC+CGG 0.321046 8.4:+31033969 None:intergenic
AAAACTTGAAAATGTTCTTC+TGG 0.321760 8.4:-31032618 MS.gene23814:CDS
CCCTCAGGCCTCTCTAAAAT+CGG 0.323007 8.4:+31032548 None:intergenic
GCTAAAACCTTGTCCGACTT+TGG 0.352838 8.4:+31032190 None:intergenic
GTCTGAATTTCTTCCGCAAA+TGG 0.355796 8.4:+31032329 None:intergenic
CTAAAACCTTGTCCGACTTT+GGG 0.366642 8.4:+31032191 None:intergenic
TTCCAAGGAGTTCCATCATC+AGG 0.368239 8.4:+31031345 None:intergenic
GGGGAGACTCCCGATCTAAC+AGG 0.374226 8.4:+31032569 None:intergenic
AAGTGCAGCGCAGTTTGTTC+AGG 0.376553 8.4:-31032918 MS.gene23814:CDS
TCAATCAATAGTTTGTTAAG+AGG 0.383534 8.4:+31031030 None:intergenic
AGCTCAGAGGAAATTGGGTT+GGG 0.387320 8.4:-31033909 MS.gene23814:CDS
CGGTGGGAACACTACCTTCC+GGG 0.395671 8.4:+31031316 None:intergenic
TGCATGGTACTCGAATTTCT+TGG 0.404519 8.4:-31032776 MS.gene23814:CDS
ATTGCTTTCGAGCTTGCCAC+TGG 0.409835 8.4:-31032230 MS.gene23814:CDS
TGTCTTGTTCTTCTTCATCT+GGG 0.422803 8.4:-31034024 MS.gene23814:CDS
GCTTAAAGTGGTCGATCAAT+TGG 0.423698 8.4:+31032825 None:intergenic
ATGCATTGGTGCTGGCCGTT+AGG 0.428045 8.4:+31032794 None:intergenic
GATTCATTTCTCATTTCATC+AGG 0.430586 8.4:+31030871 None:intergenic
TACATAGCTCAGAGGAAATT+GGG 0.433819 8.4:-31033914 MS.gene23814:CDS
TCTGCAGTTGGTCGCTTCTC+GGG 0.434856 8.4:+31030937 None:intergenic
ACACCCTTGGCTCATGGAAA+AGG 0.460564 8.4:-31030902 MS.gene23814:CDS
CCTCAGGCCTCTCTAAAATC+GGG 0.463410 8.4:+31032549 None:intergenic
AAGGTGGATACCATGCTGTC+CGG 0.465806 8.4:-31033964 MS.gene23814:CDS
GTCTTCCGATGAATAAAGTC+AGG 0.469765 8.4:-31032712 MS.gene23814:CDS
AATTCTGATAGAAATATTGA+TGG 0.472298 8.4:-31032407 MS.gene23814:CDS
AAAAGTTGAAAAGGAGAGCA+AGG 0.476403 8.4:-31032490 MS.gene23814:CDS
AGAGCTTCTATGGGAGGAAT+GGG 0.477776 8.4:-31032440 MS.gene23814:CDS
TGGTTTGGATTACTTGCATA+GGG 0.485784 8.4:-31032666 MS.gene23814:CDS
CCTGCAACACCCTTGGCTCA+TGG 0.486242 8.4:-31030908 MS.gene23814:CDS
AAGAGCTTCTATGGGAGGAA+TGG 0.488237 8.4:-31032441 MS.gene23814:CDS
ACGGGGATCTCAAAAGGATT+CGG 0.490967 8.4:-31031068 MS.gene23814:CDS
AACTCCTTGGAAAGATGCCC+CGG 0.491317 8.4:-31031334 MS.gene23814:CDS
CCAGCCTGCAGTATAACTTC+AGG 0.494640 8.4:+31032290 None:intergenic
ATTCCTTCTCCGTCGATATG+TGG 0.494693 8.4:-31032265 MS.gene23814:CDS
ATGTTACAGGTTGCTACTGC+AGG 0.497187 8.4:-31031120 MS.gene23814:intron
ACAGACACGGGGATCTCAAA+AGG 0.497743 8.4:-31031074 MS.gene23814:CDS
GGCGAAAGACCCTGTTAGAT+CGG 0.498073 8.4:-31032579 MS.gene23814:CDS
AACAGTGCCTGCAACACCCT+TGG 0.502041 8.4:-31030915 MS.gene23814:CDS
TCTGGTTTCTACTATCGATC+CGG 0.502093 8.4:-31032600 MS.gene23814:CDS
AATAAGCAACCTTAAAATCA+AGG 0.503806 8.4:-31030824 MS.gene23814:CDS
TGCAGGCACTGTTCTGCAGT+TGG 0.504517 8.4:+31030925 None:intergenic
AGGCCTGAGGGAAACATAAA+CGG 0.506847 8.4:-31032536 MS.gene23814:CDS
GCGCCGTTTATGTTTCCCTC+AGG 0.507071 8.4:+31032533 None:intergenic
CGAGTACCATGCATTGGTGC+TGG 0.511219 8.4:+31032786 None:intergenic
GCGAAAGACCCTGTTAGATC+GGG 0.514836 8.4:-31032578 MS.gene23814:CDS
GTGATCAGTTCGCCGGTGGA+AGG 0.518910 8.4:-31033937 MS.gene23814:CDS
AGCTCCTGAAGTTATACTGC+AGG 0.520770 8.4:-31032294 MS.gene23814:CDS
GTTCTTTCATCCATTGCTGA+TGG 0.521395 8.4:-31032875 MS.gene23814:CDS
AAATCAAGGTGGGGAAGTGA+AGG 0.521806 8.4:-31030810 None:intergenic
AGGTGGATACCATGCTGTCC+GGG 0.530748 8.4:-31033963 MS.gene23814:CDS
TTGCTTTCGAGCTTGCCACT+GGG 0.531169 8.4:-31032229 MS.gene23814:CDS
ATGAAGGCTTTGATTCCTAC+CGG 0.531226 8.4:-31033988 MS.gene23814:CDS
GGATCACCTTGCCCTGATGA+TGG 0.535748 8.4:-31031357 MS.gene23814:CDS
AGCAACCTTAAAATCAAGGT+GGG 0.536200 8.4:-31030820 MS.gene23814:CDS
AGGATTTCTTCGACAGACAC+GGG 0.536846 8.4:-31031086 MS.gene23814:CDS
TTGGGCTGATAAGCCATTTG+CGG 0.537617 8.4:-31032342 MS.gene23814:CDS
TAGCTCAGAGGAAATTGGGT+TGG 0.539063 8.4:-31033910 MS.gene23814:CDS
TTGGTTTGGATTACTTGCAT+AGG 0.539558 8.4:-31032667 MS.gene23814:CDS
ATGTTATTTACTCCCAAAGT+CGG 0.550928 8.4:-31032203 MS.gene23814:CDS
GATTACTTGCATAGGGAACA+TGG 0.550939 8.4:-31032659 MS.gene23814:CDS
CCTTCCGGGGCATCTTTCCA+AGG 0.553985 8.4:+31031330 None:intergenic
GTCGGTGATCAGTTCGCCGG+TGG 0.559099 8.4:-31033941 MS.gene23814:CDS
TGAAGGGGCGCCATCAGCAA+TGG 0.565495 8.4:+31032865 None:intergenic
GTTGAAAAGGAGAGCAAGGA+GGG 0.566829 8.4:-31032486 MS.gene23814:CDS
TCTGGACAAAGAGCTTCTAT+GGG 0.567262 8.4:-31032449 MS.gene23814:CDS
CGGCGAACTGATCACCGACC+CGG 0.567799 8.4:+31033945 None:intergenic
AAGGATTTCTTCGACAGACA+CGG 0.569862 8.4:-31031087 MS.gene23814:CDS
GGCTTTGATTCCTACCGGAA+AGG 0.573918 8.4:-31033983 MS.gene23814:CDS
ATCTCCCTGACTTTATTCAT+CGG 0.573932 8.4:+31032707 None:intergenic
GGATTGAGAACATACATCGT+TGG 0.574635 8.4:+31033850 None:intergenic
GTGTCTGTCGAAGAAATCCT+TGG 0.579045 8.4:+31031089 None:intergenic
GAAATTCGAGTACCATGCAT+TGG 0.579276 8.4:+31032780 None:intergenic
ATTCTGATAGAAATATTGAT+GGG 0.582335 8.4:-31032406 MS.gene23814:CDS
GATCTAACAGGGTCTTTCGC+CGG 0.591268 8.4:+31032581 None:intergenic
TTTACTCCCAAAGTCGGACA+AGG 0.591377 8.4:-31032197 MS.gene23814:CDS
TCCAAGGAGTTCCATCATCA+GGG 0.591920 8.4:+31031346 None:intergenic
TCATCGGAAGACCTTTGTAA+CGG 0.595143 8.4:+31032723 None:intergenic
CGGGTCGGTGATCAGTTCGC+CGG 0.595542 8.4:-31033944 MS.gene23814:CDS
TAGGACCTGTGTGCTTAAAG+TGG 0.596811 8.4:+31032813 None:intergenic
GGGTCTGAAGATGATGATGA+AGG 0.603847 8.4:-31034004 MS.gene23814:CDS
GGATACCATGCTGTCCGGGT+CGG 0.605762 8.4:-31033959 MS.gene23814:CDS
TTTAAGCACACAGGTCCTAA+CGG 0.605824 8.4:-31032809 MS.gene23814:CDS
CTGAGCTATGTACCTTCCAC+CGG 0.605904 8.4:+31033925 None:intergenic
AGACCACATATCGACGGAGA+AGG 0.607795 8.4:+31032262 None:intergenic
AGTATCAAAAGCAAGCCAAA+CGG 0.608489 8.4:+31033874 None:intergenic
ATGGTATCCACCTTTCCGGT+AGG 0.608525 8.4:+31033973 None:intergenic
AATGAGAAATGAATCTAGTG+TGG 0.608814 8.4:-31030863 MS.gene23814:CDS
GCCCTGATGATGGAACTCCT+TGG 0.613944 8.4:-31031347 MS.gene23814:CDS
GCTCAGAGGAAATTGGGTTG+GGG 0.614301 8.4:-31033908 MS.gene23814:CDS
TTTGATTCCTACCGGAAAGG+TGG 0.616024 8.4:-31033980 MS.gene23814:CDS
CCTGAAGTTATACTGCAGGC+TGG 0.616462 8.4:-31032290 MS.gene23814:CDS
GTCAGATACAACCGTTACAA+AGG 0.617545 8.4:-31032734 MS.gene23814:CDS
TGCTTTCGAGCTTGCCACTG+GGG 0.622478 8.4:-31032228 MS.gene23814:CDS
GATCACCGACCCGGACAGCA+TGG 0.622696 8.4:+31033954 None:intergenic
GGGAGACTCCCGATCTAACA+GGG 0.627241 8.4:+31032570 None:intergenic
TAACGGCCAGCACCAATGCA+TGG 0.636403 8.4:-31032792 MS.gene23814:CDS
GGAGTTCCATCATCAGGGCA+AGG 0.636676 8.4:+31031351 None:intergenic
CTCAGGCCTCTCTAAAATCG+GGG 0.638151 8.4:+31032550 None:intergenic
TCGGGTGCAAAATCAAGAAG+AGG 0.638735 8.4:+31030955 None:intergenic
ATCGACCACTTTAAGCACAC+AGG 0.642901 8.4:-31032818 MS.gene23814:CDS
GCAACCTTAAAATCAAGGTG+GGG 0.643577 8.4:-31030819 MS.gene23814:CDS
AGCAAAAGACCACATATCGA+CGG 0.644032 8.4:+31032256 None:intergenic
GGTGGGAACACTACCTTCCG+GGG 0.647201 8.4:+31031317 None:intergenic
CCTTGGAAAGATGCCCCGGA+AGG 0.648843 8.4:-31031330 MS.gene23814:intron
AAGCAACCTTAAAATCAAGG+TGG 0.649106 8.4:-31030821 MS.gene23814:CDS
GGACAAAGAGCTTCTATGGG+AGG 0.655170 8.4:-31032446 MS.gene23814:CDS
GGGATCTCAAAAGGATTCGG+AGG 0.658136 8.4:-31031065 MS.gene23814:CDS
GGATTTCTTCGACAGACACG+GGG 0.676658 8.4:-31031085 MS.gene23814:CDS
TCTTCCGATGAATAAAGTCA+GGG 0.678520 8.4:-31032711 MS.gene23814:CDS
GAAAAGGAGAGCAAGGAGGG+CGG 0.678748 8.4:-31032483 MS.gene23814:CDS
GATTGATGTTAGATGCAAAG+TGG 0.684911 8.4:-31032384 MS.gene23814:CDS
AGTTGAAAAGGAGAGCAAGG+AGG 0.686372 8.4:-31032487 MS.gene23814:CDS
TACTGCAGGAGTGAAATCCA+AGG 0.690749 8.4:-31031106 MS.gene23814:CDS
AGTAAATAACATATCCCCAG+TGG 0.717830 8.4:+31032214 None:intergenic
GTGGAAGGTACATAGCTCAG+AGG 0.720598 8.4:-31033922 MS.gene23814:CDS
TGAGGGAAACATAAACGGCG+CGG 0.758453 8.4:-31032531 MS.gene23814:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTTATAATAGTGAT+TGG - chr8.4:31031211-31031230 MS.gene23814:intron 15.0%
!! AATTCTGATAGAAATATTGA+TGG - chr8.4:31032431-31032450 MS.gene23814:CDS 20.0%
!! AGATTGCAATAATACAAAAA+GGG + chr8.4:31031039-31031058 None:intergenic 20.0%
!! ATTCTGATAGAAATATTGAT+GGG - chr8.4:31032432-31032451 MS.gene23814:CDS 20.0%
!! CAAAACAAATCTTTATCTTT+AGG + chr8.4:31031012-31031031 None:intergenic 20.0%
!! CTATTATATCATGTATAGTT+AGG + chr8.4:31033021-31033040 None:intergenic 20.0%
!! GATATTTGACAAGAAATAAA+AGG + chr8.4:31031846-31031865 None:intergenic 20.0%
!! TATTCAATGAACCTAAAAAA+TGG + chr8.4:31031115-31031134 None:intergenic 20.0%
!! TTATTGAGAAAAAGTTGAAA+AGG - chr8.4:31032339-31032358 MS.gene23814:CDS 20.0%
!!! AACAAATTTTGAATTTGAAG+GGG + chr8.4:31031991-31032010 None:intergenic 20.0%
!!! ACAACAAATTTTGAATTTGA+AGG + chr8.4:31031993-31032012 None:intergenic 20.0%
!!! ATTATAGGTTGATAATGATT+GGG - chr8.4:31031619-31031638 MS.gene23814:intron 20.0%
!!! CAACAAATTTTGAATTTGAA+GGG + chr8.4:31031992-31032011 None:intergenic 20.0%
!!! CATTTTCAAATCGATAAATA+CGG + chr8.4:31031451-31031470 None:intergenic 20.0%
!!! TAAATAGGTGTTAATTTTGT+TGG - chr8.4:31031712-31031731 MS.gene23814:intron 20.0%
!!! TAATAGTTGTTACTTTATTG+AGG - chr8.4:31033156-31033175 MS.gene23814:intron 20.0%
!!! TATAGTTTTGAATCTTTGAT+TGG - chr8.4:31033333-31033352 MS.gene23814:intron 20.0%
!!! TATTATAGGTTGATAATGAT+TGG - chr8.4:31031618-31031637 MS.gene23814:intron 20.0%
!!! TATTGAATAAACAGTCATTT+TGG - chr8.4:31032719-31032738 MS.gene23814:CDS 20.0%
!!! TCAATATTTCTATCAGAATT+TGG + chr8.4:31032431-31032450 None:intergenic 20.0%
! AAAACTTGAAAATGTTCTTC+TGG - chr8.4:31032220-31032239 MS.gene23814:CDS 25.0%
! AATAAGCAACCTTAAAATCA+AGG - chr8.4:31034014-31034033 MS.gene23814:CDS 25.0%
! ATAGCTAAATGTTAAGACTT+TGG - chr8.4:31031796-31031815 MS.gene23814:intron 25.0%
! ATCTTCTGTTAGTAATTTGA+TGG + chr8.4:31032831-31032850 None:intergenic 25.0%
! ATTTAATACTTGCATGTTAC+AGG - chr8.4:31033705-31033724 MS.gene23814:intron 25.0%
! CAGATTGCAATAATACAAAA+AGG + chr8.4:31031040-31031059 None:intergenic 25.0%
! CTTCAATGAATTCCATTATT+GGG + chr8.4:31033224-31033243 None:intergenic 25.0%
! GATATATGTGATGTTTGAAA+TGG - chr8.4:31031296-31031315 MS.gene23814:intron 25.0%
! GCAAAAGAAGAAACATATAA+TGG + chr8.4:31033383-31033402 None:intergenic 25.0%
! GTTAATGAGAAATCAATTCA+AGG - chr8.4:31033193-31033212 MS.gene23814:intron 25.0%
! TAAGTTCATATTTGACAGTT+CGG + chr8.4:31033076-31033095 None:intergenic 25.0%
! TAGCTAAATGTTAAGACTTT+GGG - chr8.4:31031797-31031816 MS.gene23814:intron 25.0%
! TCTTCAATGAATTCCATTAT+TGG + chr8.4:31033225-31033244 None:intergenic 25.0%
! TTGTTTATAATAGTGATTGG+AGG - chr8.4:31031214-31031233 MS.gene23814:intron 25.0%
!!! ATTTGTCAATGCATTTTGAT+TGG - chr8.4:31032152-31032171 MS.gene23814:intron 25.0%
!!! GAAGAACATTTTCAAGTTTT+AGG + chr8.4:31032220-31032239 None:intergenic 25.0%
!!! GAGGATGTTTTTTGTAATTT+TGG + chr8.4:31032788-31032807 None:intergenic 25.0%
!!! TCAATCAATAGTTTGTTAAG+AGG + chr8.4:31033811-31033830 None:intergenic 25.0%
!!! TCTGAGTTTCGATTTTAATT+TGG - chr8.4:31031772-31031791 MS.gene23814:intron 25.0%
AAATTTGCCACAGTTAGTTA+CGG + chr8.4:31033689-31033708 None:intergenic 30.0%
AACACAAGATGCAAAACTAT+AGG + chr8.4:31031396-31031415 None:intergenic 30.0%
AATGAGAAATCAATTCAAGG+AGG - chr8.4:31033196-31033215 MS.gene23814:intron 30.0%
AATGAGAAATGAATCTAGTG+TGG - chr8.4:31033975-31033994 MS.gene23814:CDS 30.0%
ACCAAGTGTTACCATTAAAA+AGG + chr8.4:31031664-31031683 None:intergenic 30.0%
AGCTAAATGTTAAGACTTTG+GGG - chr8.4:31031798-31031817 MS.gene23814:intron 30.0%
ATCAACCTATAATAGCTAAG+AGG + chr8.4:31031612-31031631 None:intergenic 30.0%
GAACTGTCAAATATGAACTT+AGG - chr8.4:31033075-31033094 MS.gene23814:intron 30.0%
GAAGAAACATATAATGGTCT+TGG + chr8.4:31033377-31033396 None:intergenic 30.0%
GATTCATTTCTCATTTCATC+AGG + chr8.4:31033970-31033989 None:intergenic 30.0%
GCAATTGTGCATCTATAAAT+AGG - chr8.4:31031697-31031716 MS.gene23814:intron 30.0%
TATGTCAGCTTGACATTAAA+TGG + chr8.4:31033263-31033282 None:intergenic 30.0%
TCGTATTAAATAGTGTAACG+CGG + chr8.4:31033572-31033591 None:intergenic 30.0%
TTAAGATATTCTCCAAATGC+AGG + chr8.4:31031369-31031388 None:intergenic 30.0%
! AACCAATCTTTGCATTTTGT+CGG - chr8.4:31033453-31033472 MS.gene23814:intron 30.0%
! ATGTTATTTACTCCCAAAGT+CGG - chr8.4:31032635-31032654 MS.gene23814:CDS 30.0%
! GATGTTTGAAATGGTGAAAT+TGG - chr8.4:31031305-31031324 MS.gene23814:intron 30.0%
! GTTTTGTATGCATTAATTGC+TGG - chr8.4:31031076-31031095 MS.gene23814:CDS 30.0%
! TAATTTTGAATGGATCGGAT+TGG - chr8.4:31031259-31031278 MS.gene23814:intron 30.0%
! TCCTTTTTAATGGTAACACT+TGG - chr8.4:31031660-31031679 MS.gene23814:intron 30.0%
! TGCGTTATGATCCTTTTTAA+TGG - chr8.4:31031650-31031669 MS.gene23814:intron 30.0%
! TTTTGGTCGTTAAATCTGTT+AGG + chr8.4:31032908-31032927 None:intergenic 30.0%
!!! AGGATGTATTTTTTGTGCAA+GGG - chr8.4:31031234-31031253 MS.gene23814:intron 30.0%
!!! GTCGCAAAAAACCATTTTTT+AGG - chr8.4:31031101-31031120 MS.gene23814:CDS 30.0%
!!! TCAATGCATTTTGATTGGTT+TGG - chr8.4:31032157-31032176 MS.gene23814:intron 30.0%
!!! TTGTAATTTTGGCTAATTCG+AGG + chr8.4:31032777-31032796 None:intergenic 30.0%
AAAAGTTGAAAAGGAGAGCA+AGG - chr8.4:31032348-31032367 MS.gene23814:CDS 35.0%
AAAATCGAAACTCAGAACCA+TGG + chr8.4:31031768-31031787 None:intergenic 35.0%
AACCGACAAAATGCAAAGAT+TGG + chr8.4:31033458-31033477 None:intergenic 35.0%
AAGCAACCTTAAAATCAAGG+TGG - chr8.4:31034017-31034036 MS.gene23814:CDS 35.0%
AGCAACCTTAAAATCAAGGT+GGG - chr8.4:31034018-31034037 MS.gene23814:CDS 35.0%
AGTAAATAACATATCCCCAG+TGG + chr8.4:31032627-31032646 None:intergenic 35.0%
AGTATCAAAAGCAAGCCAAA+CGG + chr8.4:31030967-31030986 None:intergenic 35.0%
AGTTTATAGTGAGCTGCATA+TGG - chr8.4:31031737-31031756 MS.gene23814:intron 35.0%
ATAACAATGACATGCAGAGA+CGG + chr8.4:31033545-31033564 None:intergenic 35.0%
ATAGATTTGTCTCTTTGCAG+AGG - chr8.4:31031557-31031576 MS.gene23814:intron 35.0%
ATCTCCCTGACTTTATTCAT+CGG + chr8.4:31032134-31032153 None:intergenic 35.0%
ATTGAAGATACCTGTGTTAC+CGG - chr8.4:31033237-31033256 MS.gene23814:intron 35.0%
GAAATGGTGAAATTGGTGAA+TGG - chr8.4:31031312-31031331 MS.gene23814:intron 35.0%
GATTGATGTTAGATGCAAAG+TGG - chr8.4:31032454-31032473 MS.gene23814:CDS 35.0%
GGATGGTCAGATATGTATAA+TGG - chr8.4:31031491-31031510 MS.gene23814:intron 35.0%
GGGTCATATGTTCATATGAA+AGG - chr8.4:31032947-31032966 MS.gene23814:CDS 35.0%
TAACGACCAAAATGAGTGTT+CGG - chr8.4:31032916-31032935 MS.gene23814:CDS 35.0%
TACATAGCTCAGAGGAAATT+GGG - chr8.4:31030924-31030943 MS.gene23814:CDS 35.0%
TCATATGAAAGGAAAGCTTC+TGG - chr8.4:31032958-31032977 MS.gene23814:intron 35.0%
TCGAAATGTGAATGTGGATT+TGG - chr8.4:31031339-31031358 MS.gene23814:CDS 35.0%
TCTTCCGATGAATAAAGTCA+GGG - chr8.4:31032127-31032146 MS.gene23814:intron 35.0%
TGAATCTAGTGTGGAAAAAG+TGG - chr8.4:31033984-31034003 MS.gene23814:CDS 35.0%
TGGAAAATTTAGCATATGCG+TGG - chr8.4:31031514-31031533 MS.gene23814:intron 35.0%
TGGTCAGATATGTATAATGG+TGG - chr8.4:31031494-31031513 MS.gene23814:intron 35.0%
TTGTATGCATTAATTGCTGG+TGG - chr8.4:31031079-31031098 MS.gene23814:CDS 35.0%
TTTAGCATATGCGTGGAATT+TGG - chr8.4:31031521-31031540 MS.gene23814:intron 35.0%
! AGTTTTGCATCTTGTGTTGT+TGG - chr8.4:31031398-31031417 MS.gene23814:intron 35.0%
! ATGTCTTGTTCTTCTTCATC+TGG - chr8.4:31030813-31030832 MS.gene23814:CDS 35.0%
! CAATATCCGAACACTCATTT+TGG + chr8.4:31032925-31032944 None:intergenic 35.0%
! GGGTGTAATTTTGAATGGAT+CGG - chr8.4:31031254-31031273 MS.gene23814:intron 35.0%
! GTGAGTTTTCTGATCTTGAT+TGG - chr8.4:31031470-31031489 MS.gene23814:intron 35.0%
! GTTTTCTGATCTTGATTGGA+TGG - chr8.4:31031474-31031493 MS.gene23814:intron 35.0%
! TACGAAGTGTTCTCAAATAG+TGG - chr8.4:31033587-31033606 MS.gene23814:intron 35.0%
! TGGTTTGGATTACTTGCATA+GGG - chr8.4:31032172-31032191 MS.gene23814:intron 35.0%
! TGTCTTGTTCTTCTTCATCT+GGG - chr8.4:31030814-31030833 MS.gene23814:CDS 35.0%
! TTTAATGGTAACACTTGGTG+CGG - chr8.4:31031665-31031684 MS.gene23814:intron 35.0%
! TTTTGGTCCTTGAATGTGTT+AGG - chr8.4:31032736-31032755 MS.gene23814:CDS 35.0%
!! AGATGCAAAGTGGTTGATTT+TGG - chr8.4:31032464-31032483 MS.gene23814:CDS 35.0%
!! TGATTTTGGAAATGCGTGTT+GGG - chr8.4:31032478-31032497 MS.gene23814:CDS 35.0%
!! TGCAAGGGTGTAATTTTGAA+TGG - chr8.4:31031249-31031268 MS.gene23814:intron 35.0%
!! TTGATTTTGGAAATGCGTGT+TGG - chr8.4:31032477-31032496 MS.gene23814:CDS 35.0%
!! TTGGTTTGGATTACTTGCAT+AGG - chr8.4:31032171-31032190 MS.gene23814:intron 35.0%
!!! GAGGATGTATTTTTTGTGCA+AGG - chr8.4:31031233-31031252 MS.gene23814:intron 35.0%
AAGGATTTCTTCGACAGACA+CGG - chr8.4:31033751-31033770 MS.gene23814:intron 40.0%
AATGAGTGTTCGGATATTGC+AGG - chr8.4:31032926-31032945 MS.gene23814:CDS 40.0%
AGCAAAAGACCACATATCGA+CGG + chr8.4:31032585-31032604 None:intergenic 40.0%
AGCTGCATATGGAAATACCA+TGG - chr8.4:31031748-31031767 MS.gene23814:intron 40.0%
AGTGTGGAAAAAGTGGATGT+TGG - chr8.4:31033991-31034010 MS.gene23814:CDS 40.0%
AGTTACGGTGTAGTCAATCA+TGG + chr8.4:31033674-31033693 None:intergenic 40.0%
ATGAGTGTTCGGATATTGCA+GGG - chr8.4:31032927-31032946 MS.gene23814:CDS 40.0%
CTAAAACCTTGTCCGACTTT+GGG + chr8.4:31032650-31032669 None:intergenic 40.0%
GAAATTCGAGTACCATGCAT+TGG + chr8.4:31032061-31032080 None:intergenic 40.0%
GATTACTTGCATAGGGAACA+TGG - chr8.4:31032179-31032198 MS.gene23814:intron 40.0%
GCAACCTTAAAATCAAGGTG+GGG - chr8.4:31034019-31034038 MS.gene23814:CDS 40.0%
GCTTAAAGTGGTCGATCAAT+TGG + chr8.4:31032016-31032035 None:intergenic 40.0%
GGAAAACAAAAATTCCGCAC+AGG + chr8.4:31031825-31031844 None:intergenic 40.0%
GGATTGAGAACATACATCGT+TGG + chr8.4:31030991-31031010 None:intergenic 40.0%
GGATTTGGATTTCCTGCATT+TGG - chr8.4:31031354-31031373 MS.gene23814:CDS 40.0%
GGTCATTCGAAATGTGAATG+TGG - chr8.4:31031333-31031352 MS.gene23814:CDS 40.0%
GTACATAGCTCAGAGGAAAT+TGG - chr8.4:31030923-31030942 MS.gene23814:CDS 40.0%
GTCAGATACAACCGTTACAA+AGG - chr8.4:31032104-31032123 MS.gene23814:intron 40.0%
GTCTGAATTTCTTCCGCAAA+TGG + chr8.4:31032512-31032531 None:intergenic 40.0%
GTCTTCCGATGAATAAAGTC+AGG - chr8.4:31032126-31032145 MS.gene23814:intron 40.0%
GTTAGCACCTAACACATTCA+AGG + chr8.4:31032746-31032765 None:intergenic 40.0%
GTTCTTTCATCCATTGCTGA+TGG - chr8.4:31031963-31031982 MS.gene23814:intron 40.0%
TCAGCTTGACATTAAATGGC+CGG + chr8.4:31033259-31033278 None:intergenic 40.0%
TCATCGGAAGACCTTTGTAA+CGG + chr8.4:31032118-31032137 None:intergenic 40.0%
TCTGGACAAAGAGCTTCTAT+GGG - chr8.4:31032389-31032408 MS.gene23814:CDS 40.0%
TGCATGGTACTCGAATTTCT+TGG - chr8.4:31032062-31032081 MS.gene23814:intron 40.0%
TTCTGGACAAAGAGCTTCTA+TGG - chr8.4:31032388-31032407 MS.gene23814:CDS 40.0%
TTGCGCCTCTTAGCTATTAT+AGG - chr8.4:31031604-31031623 MS.gene23814:intron 40.0%
TTTAAGCACACAGGTCCTAA+CGG - chr8.4:31032029-31032048 MS.gene23814:intron 40.0%
! ACTTCCCCACCTTGATTTTA+AGG + chr8.4:31034026-31034045 None:intergenic 40.0%
! ATGAAGGCTTTGATTCCTAC+CGG - chr8.4:31030850-31030869 MS.gene23814:CDS 40.0%
! GGATTCGGAGGCTAAAATTT+TGG - chr8.4:31033785-31033804 MS.gene23814:intron 40.0%
! TCTGGTTTCTACTATCGATC+CGG - chr8.4:31032238-31032257 MS.gene23814:CDS 40.0%
AAGAGCTTCTATGGGAGGAA+TGG - chr8.4:31032397-31032416 MS.gene23814:CDS 45.0%
ACGGGGATCTCAAAAGGATT+CGG - chr8.4:31033770-31033789 MS.gene23814:intron 45.0%
AGAGCTTCTATGGGAGGAAT+GGG - chr8.4:31032398-31032417 MS.gene23814:CDS 45.0%
AGCTCAGAGGAAATTGGGTT+GGG - chr8.4:31030929-31030948 MS.gene23814:CDS 45.0%
AGCTCCTGAAGTTATACTGC+AGG - chr8.4:31032544-31032563 MS.gene23814:CDS 45.0%
AGGATTTCTTCGACAGACAC+GGG - chr8.4:31033752-31033771 MS.gene23814:intron 45.0%
AGGCCTGAGGGAAACATAAA+CGG - chr8.4:31032302-31032321 MS.gene23814:CDS 45.0%
AGGGCGGTAGCTAAAATTTC+TGG - chr8.4:31032371-31032390 MS.gene23814:CDS 45.0%
AGTTGAAAAGGAGAGCAAGG+AGG - chr8.4:31032351-31032370 MS.gene23814:CDS 45.0%
ATCGACCACTTTAAGCACAC+AGG - chr8.4:31032020-31032039 MS.gene23814:intron 45.0%
ATGTTACAGGTTGCTACTGC+AGG - chr8.4:31033718-31033737 MS.gene23814:intron 45.0%
ATTCCTTCTCCGTCGATATG+TGG - chr8.4:31032573-31032592 MS.gene23814:CDS 45.0%
CATTAAATGGCCGGTAACAC+AGG + chr8.4:31033250-31033269 None:intergenic 45.0%
CCAAACTAACGAGACATTGG+AGG + chr8.4:31032807-31032826 None:intergenic 45.0%
CCTCCAATGTCTCGTTAGTT+TGG - chr8.4:31032804-31032823 MS.gene23814:CDS 45.0%
CTTTGTGAGTCTCTACACCT+CGG - chr8.4:31033415-31033434 MS.gene23814:intron 45.0%
GACTACACCGTAACTAACTG+TGG - chr8.4:31033679-31033698 MS.gene23814:intron 45.0%
GCTAAAACCTTGTCCGACTT+TGG + chr8.4:31032651-31032670 None:intergenic 45.0%
GGACCAAACTAACGAGACAT+TGG + chr8.4:31032810-31032829 None:intergenic 45.0%
GTCTCTTTGCAGAGGACTTA+AGG - chr8.4:31031565-31031584 MS.gene23814:intron 45.0%
GTGTCTGTCGAAGAAATCCT+TGG + chr8.4:31033752-31033771 None:intergenic 45.0%
GTTGAAAAGGAGAGCAAGGA+GGG - chr8.4:31032352-31032371 MS.gene23814:CDS 45.0%
TACTGCAGGAGTGAAATCCA+AGG - chr8.4:31033732-31033751 MS.gene23814:intron 45.0%
TAGCTCAGAGGAAATTGGGT+TGG - chr8.4:31030928-31030947 MS.gene23814:CDS 45.0%
TAGGACCTGTGTGCTTAAAG+TGG + chr8.4:31032028-31032047 None:intergenic 45.0%
TCCAAGGAGTTCCATCATCA+GGG + chr8.4:31033495-31033514 None:intergenic 45.0%
TCGGGTGCAAAATCAAGAAG+AGG + chr8.4:31033886-31033905 None:intergenic 45.0%
TTATCCTGACATGCTATCCG+AGG + chr8.4:31033435-31033454 None:intergenic 45.0%
TTCCAAGGAGTTCCATCATC+AGG + chr8.4:31033496-31033515 None:intergenic 45.0%
TTGGGCTGATAAGCCATTTG+CGG - chr8.4:31032496-31032515 MS.gene23814:CDS 45.0%
TTTACTCCCAAAGTCGGACA+AGG - chr8.4:31032641-31032660 MS.gene23814:CDS 45.0%
TTTGATTCCTACCGGAAAGG+TGG - chr8.4:31030858-31030877 MS.gene23814:CDS 45.0%
! AGTCCTTTTCCATGAGCCAA+GGG + chr8.4:31033942-31033961 None:intergenic 45.0%
! GGGTCTGAAGATGATGATGA+AGG - chr8.4:31030834-31030853 MS.gene23814:CDS 45.0%
!! AGGAAAGCTTCTGGAACAGT+TGG - chr8.4:31032967-31032986 MS.gene23814:intron 45.0%
!! CTTTGCATTTTGTCGGTTGC+AGG - chr8.4:31033460-31033479 MS.gene23814:intron 45.0%
!! TTCAAGGAGGCACCCAATAA+TGG - chr8.4:31033209-31033228 MS.gene23814:intron 45.0%
AACTCCTTGGAAAGATGCCC+CGG - chr8.4:31033504-31033523 MS.gene23814:intron 50.0%
AAGGTGGATACCATGCTGTC+CGG - chr8.4:31030874-31030893 MS.gene23814:CDS 50.0%
ACAATGACATGCAGAGACGG+TGG + chr8.4:31033542-31033561 None:intergenic 50.0%
ACACCCTTGGCTCATGGAAA+AGG - chr8.4:31033936-31033955 MS.gene23814:CDS 50.0%
ACAGACACGGGGATCTCAAA+AGG - chr8.4:31033764-31033783 MS.gene23814:intron 50.0%
AGACCACATATCGACGGAGA+AGG + chr8.4:31032579-31032598 None:intergenic 50.0%
ATGGTATCCACCTTTCCGGT+AGG + chr8.4:31030868-31030887 None:intergenic 50.0%
ATTGCTTTCGAGCTTGCCAC+TGG - chr8.4:31032608-31032627 MS.gene23814:CDS 50.0%
CAATGACATGCAGAGACGGT+GGG + chr8.4:31033541-31033560 None:intergenic 50.0%
CAGCATGGTATCCACCTTTC+CGG + chr8.4:31030872-31030891 None:intergenic 50.0%
CCAGCCTGCAGTATAACTTC+AGG + chr8.4:31032551-31032570 None:intergenic 50.0%
CCTGAAGTTATACTGCAGGC+TGG - chr8.4:31032548-31032567 MS.gene23814:CDS 50.0%
CTGAGCTATGTACCTTCCAC+CGG + chr8.4:31030916-31030935 None:intergenic 50.0%
GATCTAACAGGGTCTTTCGC+CGG + chr8.4:31032260-31032279 None:intergenic 50.0%
GCGAAAGACCCTGTTAGATC+GGG - chr8.4:31032260-31032279 MS.gene23814:CDS 50.0%
GGACAAAGAGCTTCTATGGG+AGG - chr8.4:31032392-31032411 MS.gene23814:CDS 50.0%
GGATTTCTTCGACAGACACG+GGG - chr8.4:31033753-31033772 MS.gene23814:intron 50.0%
GGCGAAAGACCCTGTTAGAT+CGG - chr8.4:31032259-31032278 MS.gene23814:CDS 50.0%
GGGATCTCAAAAGGATTCGG+AGG - chr8.4:31033773-31033792 MS.gene23814:intron 50.0%
TACACCTCGGATAGCATGTC+AGG - chr8.4:31033428-31033447 MS.gene23814:intron 50.0%
TGAGGGAAACATAAACGGCG+CGG - chr8.4:31032307-31032326 MS.gene23814:CDS 50.0%
TTCTGCAGTTGGTCGCTTCT+CGG + chr8.4:31033905-31033924 None:intergenic 50.0%
TTGCTTTCGAGCTTGCCACT+GGG - chr8.4:31032609-31032628 MS.gene23814:CDS 50.0%
TTTGCCACGCTGCAAAGCTA+TGG + chr8.4:31033624-31033643 None:intergenic 50.0%
! AAGTGCAGCGCAGTTTGTTC+AGG - chr8.4:31031920-31031939 MS.gene23814:intron 50.0%
! CAAACTGCGCTGCACTTTTC+TGG + chr8.4:31031917-31031936 None:intergenic 50.0%
! GAGTCCTTTTCCATGAGCCA+AGG + chr8.4:31033943-31033962 None:intergenic 50.0%
! GCTCAGAGGAAATTGGGTTG+GGG - chr8.4:31030930-31030949 MS.gene23814:CDS 50.0%
! GGCTTTGATTCCTACCGGAA+AGG - chr8.4:31030855-31030874 MS.gene23814:CDS 50.0%
! GGGGTCAGTTTTCAACCGTT+TGG - chr8.4:31030949-31030968 MS.gene23814:CDS 50.0%
! GTGGAAGGTACATAGCTCAG+AGG - chr8.4:31030916-31030935 MS.gene23814:CDS 50.0%
!! ACAAGGTTTTAGCGAGGACG+AGG - chr8.4:31032658-31032677 MS.gene23814:CDS 50.0%
!! AGTCGGACAAGGTTTTAGCG+AGG - chr8.4:31032652-31032671 MS.gene23814:CDS 50.0%
!! CCCTCAGGCCTCTCTAAAAT+CGG + chr8.4:31032293-31032312 None:intergenic 50.0%
!! CCGATTTTAGAGAGGCCTGA+GGG - chr8.4:31032290-31032309 MS.gene23814:CDS 50.0%
!! CCTCAGGCCTCTCTAAAATC+GGG + chr8.4:31032292-31032311 None:intergenic 50.0%
!! CTCAGGCCTCTCTAAAATCG+GGG + chr8.4:31032291-31032310 None:intergenic 50.0%
!! GAGTCTCCCCGATTTTAGAG+AGG - chr8.4:31032282-31032301 MS.gene23814:CDS 50.0%
!! TAAGACTTTGGGGTCCTGTG+CGG - chr8.4:31031808-31031827 MS.gene23814:intron 50.0%
AACAGTGCCTGCAACACCCT+TGG - chr8.4:31033923-31033942 MS.gene23814:CDS 55.0%
ACGGTGGGAACACTACCTTC+CGG + chr8.4:31033526-31033545 None:intergenic 55.0%
AGGTGGATACCATGCTGTCC+GGG - chr8.4:31030875-31030894 MS.gene23814:CDS 55.0%
GAAAAGGAGAGCAAGGAGGG+CGG - chr8.4:31032355-31032374 MS.gene23814:CDS 55.0%
GCGCCGTTTATGTTTCCCTC+AGG + chr8.4:31032308-31032327 None:intergenic 55.0%
GGAGTTCCATCATCAGGGCA+AGG + chr8.4:31033490-31033509 None:intergenic 55.0%
GGATCACCTTGCCCTGATGA+TGG - chr8.4:31033481-31033500 MS.gene23814:intron 55.0%
GGGAGACTCCCGATCTAACA+GGG + chr8.4:31032271-31032290 None:intergenic 55.0%
TAACGGCCAGCACCAATGCA+TGG - chr8.4:31032046-31032065 MS.gene23814:intron 55.0%
TCTGCAGTTGGTCGCTTCTC+GGG + chr8.4:31033904-31033923 None:intergenic 55.0%
TGCTTTCGAGCTTGCCACTG+GGG - chr8.4:31032610-31032629 MS.gene23814:CDS 55.0%
! AGCACCATAGCTTTGCAGCG+TGG - chr8.4:31033617-31033636 MS.gene23814:intron 55.0%
! CGAGTACCATGCATTGGTGC+TGG + chr8.4:31032055-31032074 None:intergenic 55.0%
! TGCAGGCACTGTTCTGCAGT+TGG + chr8.4:31033916-31033935 None:intergenic 55.0%
!! ATGCATTGGTGCTGGCCGTT+AGG + chr8.4:31032047-31032066 None:intergenic 55.0%
!! CCCGATTTTAGAGAGGCCTG+AGG - chr8.4:31032289-31032308 MS.gene23814:CDS 55.0%
!! GCCCTGATGATGGAACTCCT+TGG - chr8.4:31033491-31033510 MS.gene23814:intron 55.0%
CCTGCAACACCCTTGGCTCA+TGG - chr8.4:31033930-31033949 MS.gene23814:CDS 60.0%
CCTTGGAAAGATGCCCCGGA+AGG - chr8.4:31033508-31033527 MS.gene23814:intron 60.0%
CGGTGGGAACACTACCTTCC+GGG + chr8.4:31033525-31033544 None:intergenic 60.0%
GGATACCATGCTGTCCGGGT+CGG - chr8.4:31030879-31030898 MS.gene23814:CDS 60.0%
GGGGAGACTCCCGATCTAAC+AGG + chr8.4:31032272-31032291 None:intergenic 60.0%
GGTGGGAACACTACCTTCCG+GGG + chr8.4:31033524-31033543 None:intergenic 60.0%
GTGATCAGTTCGCCGGTGGA+AGG - chr8.4:31030901-31030920 MS.gene23814:CDS 60.0%
! CCTTCCGGGGCATCTTTCCA+AGG + chr8.4:31033511-31033530 None:intergenic 60.0%
!! CCATGAGCCAAGGGTGTTGC+AGG + chr8.4:31033933-31033952 None:intergenic 60.0%
!! TGAAGGGGCGCCATCAGCAA+TGG + chr8.4:31031976-31031995 None:intergenic 60.0%
CGGCGAACTGATCACCGACC+CGG + chr8.4:31030896-31030915 None:intergenic 65.0%
CGGGTCGGTGATCAGTTCGC+CGG - chr8.4:31030894-31030913 MS.gene23814:CDS 65.0%
GATCACCGACCCGGACAGCA+TGG + chr8.4:31030887-31030906 None:intergenic 65.0%
GTCGGTGATCAGTTCGCCGG+TGG - chr8.4:31030897-31030916 MS.gene23814:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 31030813 31034047 31030813 ID=MS.gene23814
chr8.4 mRNA 31030813 31034047 31030813 ID=MS.gene23814.t1;Parent=MS.gene23814
chr8.4 exon 31033865 31034047 31033865 ID=MS.gene23814.t1.exon1;Parent=MS.gene23814.t1
chr8.4 CDS 31033865 31034047 31033865 ID=cds.MS.gene23814.t1;Parent=MS.gene23814.t1
chr8.4 exon 31032181 31032966 31032181 ID=MS.gene23814.t1.exon2;Parent=MS.gene23814.t1
chr8.4 CDS 31032181 31032966 31032181 ID=cds.MS.gene23814.t1;Parent=MS.gene23814.t1
chr8.4 exon 31031331 31031378 31031331 ID=MS.gene23814.t1.exon3;Parent=MS.gene23814.t1
chr8.4 CDS 31031331 31031378 31031331 ID=cds.MS.gene23814.t1;Parent=MS.gene23814.t1
chr8.4 exon 31030813 31031133 31030813 ID=MS.gene23814.t1.exon4;Parent=MS.gene23814.t1
chr8.4 CDS 31030813 31031133 31030813 ID=cds.MS.gene23814.t1;Parent=MS.gene23814.t1
Gene Sequence

>MS.gene23814

ATGTCTTGTTCTTCTTCATCTGGGTCTGAAGATGATGATGAAGGCTTTGATTCCTACCGGAAAGGTGGATACCATGCTGTCCGGGTCGGTGATCAGTTCGCCGGTGGAAGGTACATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTTTCAACCGTTTGGCTTGCTTTTGATACTACCAACGATGTATGTTCTCAATCCTAAAGATAAAGATTTGTTTTGAATACCCTTTTTGTATTATTGCAATCTGTTTTGAATCTTGCTTTGTTTTGTATGCATTAATTGCTGGTGGTCGCAAAAAACCATTTTTTAGGTTCATTGAATAACTGAATAGAGTATGTATTTTGTAAATATTATAGATCAGATACATCAATTATACAGTAAACTTAAAAAGTTATTATTTTTTGTTTATAATAGTGATTGGAGGATGTATTTTTTGTGCAAGGGTGTAATTTTGAATGGATCGGATTGGTATGATTTGAATTTGATATATGTGATGTTTGAAATGGTGAAATTGGTGAATGGTCATTCGAAATGTGAATGTGGATTTGGATTTCCTGCATTTGGAGAATATCTTAAAGTTCCTATAGTTTTGCATCTTGTGTTGTTGGATCTATATTTTAATTCAGTACTTTGTACCGTATTTATCGATTTGAAAATGTGAGTTTTCTGATCTTGATTGGATGGTCAGATATGTATAATGGTGGAAAATTTAGCATATGCGTGGAATTTGGATTTCTTGATTGCATAGATTTGTCTCTTTGCAGAGGACTTAAGGAGTGATAAATGTGTTTTTGCGCCTCTTAGCTATTATAGGTTGATAATGATTGGGTAATCTCGTGCGTTATGATCCTTTTTAATGGTAACACTTGGTGCGGTTTGTGTGAGCAATTGTGCATCTATAAATAGGTGTTAATTTTGTTGGACAGTTTATAGTGAGCTGCATATGGAAATACCATGGTTCTGAGTTTCGATTTTAATTTGGCATAGCTAAATGTTAAGACTTTGGGGTCCTGTGCGGAATTTTTGTTTTCCTTTTATTTCTTGTCAAATATCTTTCTGATTTTATGTTTGTGATTTTCAGACATATGTTGCTCTGAAGATCCAGAAAAGTGCAGCGCAGTTTGTTCAGGCTGCTCTTCACGAGATAGATGTTCTTTCATCCATTGCTGATGGCGCCCCTTCAAATTCAAAATTTGTTGTCCAATTGATCGACCACTTTAAGCACACAGGTCCTAACGGCCAGCACCAATGCATGGTACTCGAATTTCTTGGAGATAGCTTGCTACGTCTAGTCAGATACAACCGTTACAAAGGTCTTCCGATGAATAAAGTCAGGGAGATTTGTCAATGCATTTTGATTGGTTTGGATTACTTGCATAGGGAACATGGTATTATACACACAGACCTAAAACTTGAAAATGTTCTTCTGGTTTCTACTATCGATCCGGCGAAAGACCCTGTTAGATCGGGAGTCTCCCCGATTTTAGAGAGGCCTGAGGGAAACATAAACGGCGCGGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCGGTAGCTAAAATTTCTGGACAAAGAGCTTCTATGGGAGGAATGGGAGAAGCTCCAAATTCTGATAGAAATATTGATGGGATTGATGTTAGATGCAAAGTGGTTGATTTTGGAAATGCGTGTTGGGCTGATAAGCCATTTGCGGAAGAAATTCAGACACGACAGTATAGAGCTCCTGAAGTTATACTGCAGGCTGGTTATTCCTTCTCCGTCGATATGTGGTCTTTTGCTTGTATTGCTTTCGAGCTTGCCACTGGGGATATGTTATTTACTCCCAAAGTCGGACAAGGTTTTAGCGAGGACGAGGTATGATTGTTAGTTTGTATGCTATTGCTATTTAAATGTTATTGAATAAACAGTCATTTTGGTCCTTGAATGTGTTAGGTGCTAACGTTATAGTCCTCGAATTAGCCAAAATTACAAAAAACATCCTCCAATGTCTCGTTAGTTTGGTCCATCAAATTACTAACAGAAGATACACACAAAGATGTTTTTGTAATTTCAACATGTTTAAGAACATTAGTGACACTGCCTAACAGATTTAACGACCAAAATGAGTGTTCGGATATTGCAGGGTCATATGTTCATATGAAAGGAAAGCTTCTGGAACAGTTGGAACAGTTTAAAACTGTCATCTAAGAATTCCTAACTATACATGATATAATAGATTATTAGATCACATTTCTGTCAACAGAAAAGCCGAACTGTCAAATATGAACTTAGGATTTTTAACTATCATAGATGATTGCTCAAAAAAAATAAAAATATCATAGATGCATTTATAATAGTTGTTACTTTATTGAGGAATATGTGAATGATGTTAATGAGAAATCAATTCAAGGAGGCACCCAATAATGGAATTCATTGAAGATACCTGTGTTACCGGCCATTTAATGTCAAGCTGACATATATCTATGAATTCTATCTAACACTAAAGTTCTTTTCATTTGACTTCAGAATATAGTTTTGAATCTTTGATTGGACTTTACATAATATAGTACCAAGACCATTATATGTTTCTTCTTTTGCTTGTTTCTGATGCTTTGTGAGTCTCTACACCTCGGATAGCATGTCAGGATAACCAATCTTTGCATTTTGTCGGTTGCAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTAGTGTTCCCACCGTCTCTGCATGTCATTGTTATTGTTCCGCGTTACACTATTTAATACGAAGTGTTCTCAAATAGTGGCTTTAGCAGCACCATAGCTTTGCAGCGTGGCAAAATTTAACAAATTGATATTTTCTGCAATCCATGATTGACTACACCGTAACTAACTGTGGCAAATTTAATACTTGCATGTTACAGGTTGCTACTGCAGGAGTGAAATCCAAGGATTTCTTCGACAGACACGGGGATCTCAAAAGGATTCGGAGGCTAAAATTTTGGCCTCTTAACAAACTATTGATTGAAAGATACAAATTATCAGAGAGTGATGCTCATGAATTTTCAGAGTTTCTTTTACCTCTTCTTGATTTTGCACCCGAGAAGCGACCAACTGCAGAACAGTGCCTGCAACACCCTTGGCTCATGGAAAAGGACTCTGTTCCTGATGAAATGAGAAATGAATCTAGTGTGGAAAAAGTGGATGTTGGAATAAGCAACCTTAAAATCAAGGTGGGGAAGTGA
Protein sequence

>MS.gene23814.t1

MSCSSSSGSEDDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAFDTTNDTYVALKIQKSAAQFVQAALHEIDVLSSIADGAPSNSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLVRYNRYKGLPMNKVREICQCILIGLDYLHREHGIIHTDLKLENVLLVSTIDPAKDPVRSGVSPILERPEGNINGAVTSLIEKKLKRRARRAVAKISGQRASMGGMGEAPNSDRNIDGIDVRCKVVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVATAGVKSKDFFDRHGDLKRIRRLKFWPLNKLLIERYKLSESDAHEFSEFLLPLLDFAPEKRPTAEQCLQHPWLMEKDSVPDEMRNESSVEKVDVGISNLKIKVGK