AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47936

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47936.t1 MTR_8g089420 93.952 463 12 6 1 454 1 456 0.0 848
MS.gene47936.t1 MTR_2g018990 73.662 467 96 10 1 453 1 454 0.0 657
MS.gene47936.t1 MTR_4g113790 51.768 396 167 6 52 424 66 460 1.71e-138 407
MS.gene47936.t1 MTR_2g027240 51.282 390 163 8 52 421 179 561 2.94e-132 394
MS.gene47936.t1 MTR_1g060790 50.521 384 169 7 52 421 445 821 2.72e-128 392
MS.gene47936.t1 MTR_3g010260 50.000 390 170 8 52 424 390 771 1.16e-124 381
MS.gene47936.t1 MTR_8g006870 50.781 384 166 7 52 420 345 720 1.55e-124 380
MS.gene47936.t1 MTR_6g004720 47.775 427 196 7 12 421 185 601 1.56e-123 373
MS.gene47936.t1 MTR_7g081665 47.700 413 188 7 52 444 339 743 4.30e-123 376
MS.gene47936.t1 MTR_7g033640 49.744 390 169 7 52 421 207 589 4.36e-123 371
MS.gene47936.t1 MTR_7g104180 46.763 417 200 8 52 453 467 876 2.05e-122 377
MS.gene47936.t1 MTR_2g062850 48.196 388 179 5 48 421 141 520 4.25e-121 365
MS.gene47936.t1 MTR_2g069990 49.866 373 167 8 52 422 67 421 7.49e-120 358
MS.gene47936.t1 MTR_8g446990 48.446 386 177 8 51 421 105 483 8.79e-116 350
MS.gene47936.t1 MTR_2g085065 47.326 374 175 7 56 413 66 433 9.02e-107 325
MS.gene47936.t1 MTR_8g070530 43.636 385 175 8 40 421 560 905 4.57e-100 320
MS.gene47936.t1 MTR_2g095980 41.192 369 187 6 52 420 346 684 2.03e-88 284
MS.gene47936.t1 MTR_2g095980 41.192 369 187 6 52 420 601 939 1.28e-86 285
MS.gene47936.t1 MTR_2g095980 41.192 369 187 6 52 420 601 939 1.66e-86 285
MS.gene47936.t1 MTR_4g061610 40.483 373 170 9 52 420 619 943 8.98e-81 269
MS.gene47936.t1 MTR_4g065080 36.973 403 215 11 75 454 10 396 4.93e-73 236
MS.gene47936.t1 MTR_8g011780 37.845 362 203 8 71 421 11 361 8.41e-72 233
MS.gene47936.t1 MTR_7g053200 35.171 381 215 9 73 434 6 373 3.79e-70 229
MS.gene47936.t1 MTR_2g098240 36.857 350 190 8 75 421 12 333 1.68e-69 226
MS.gene47936.t1 MTR_6g470940 32.990 388 223 8 58 444 855 1206 3.01e-52 190
MS.gene47936.t1 MTR_4g035835 34.421 337 185 8 72 408 751 1051 2.73e-50 184
MS.gene47936.t1 MTR_5g069000 34.125 337 186 8 72 408 755 1055 3.50e-50 184
MS.gene47936.t1 MTR_7g073520 30.226 354 172 8 75 422 143 427 7.62e-46 166
MS.gene47936.t1 MTR_1g075880 32.277 347 203 11 79 420 116 435 2.76e-45 165
MS.gene47936.t1 MTR_1g069735 31.161 353 213 10 71 421 111 435 1.60e-44 162
MS.gene47936.t1 MTR_1g069735 31.161 353 213 10 71 421 111 435 1.85e-44 162
MS.gene47936.t1 MTR_1g069735 31.161 353 213 10 71 421 111 435 4.57e-44 162
MS.gene47936.t1 MTR_1g090917 31.139 395 201 10 54 443 32 360 1.34e-43 160
MS.gene47936.t1 MTR_7g097150 29.873 395 234 13 59 442 97 459 2.65e-43 160
MS.gene47936.t1 MTR_1g090917 32.000 375 184 10 54 423 32 340 7.77e-43 158
MS.gene47936.t1 MTR_3g104700 31.034 348 201 11 71 407 85 404 6.06e-42 155
MS.gene47936.t1 MTR_2g040150 31.412 347 201 11 71 407 104 423 1.84e-41 154
MS.gene47936.t1 MTR_1g019340 29.243 383 235 13 42 421 76 425 5.91e-41 152
MS.gene47936.t1 MTR_1g019340 29.243 383 235 13 42 421 76 425 2.75e-40 151
MS.gene47936.t1 MTR_1g442790 30.226 354 219 10 70 421 100 427 5.28e-40 150
MS.gene47936.t1 MTR_1g442790 30.226 354 219 10 70 421 100 427 5.38e-40 151
MS.gene47936.t1 MTR_1g042700 29.775 356 217 11 70 421 105 431 1.49e-39 149
MS.gene47936.t1 MTR_3g104700 29.863 365 200 12 71 407 85 421 1.59e-38 146
MS.gene47936.t1 MTR_1g090917 32.180 289 135 8 158 441 1 233 8.82e-29 116
MS.gene47936.t1 MTR_1g090917 31.399 293 134 8 158 448 1 228 4.28e-28 115
MS.gene47936.t1 MTR_3g110405 26.254 339 178 7 52 389 10 277 7.64e-27 110
MS.gene47936.t1 MTR_2g020380 28.485 330 163 8 77 405 1 258 4.32e-26 112
MS.gene47936.t1 MTR_4g107280 35.897 156 94 2 79 230 88 241 1.08e-24 105
MS.gene47936.t1 MTR_4g107280 41.739 115 61 2 295 408 247 356 4.15e-21 95.5
MS.gene47936.t1 MTR_8g040300 29.154 319 155 10 76 393 6 254 3.26e-24 102
MS.gene47936.t1 MTR_4g029020 25.691 362 189 11 69 422 1 290 4.33e-23 101
MS.gene47936.t1 MTR_3g099920 26.437 348 169 11 77 418 16 282 1.67e-22 100
MS.gene47936.t1 MTR_4g131060 27.987 318 161 8 73 389 11 261 7.87e-22 97.8
MS.gene47936.t1 MTR_5g088350 26.688 311 161 8 80 389 13 257 2.05e-21 95.5
MS.gene47936.t1 MTR_4g107280 41.739 115 61 2 295 408 208 317 4.74e-21 94.7
MS.gene47936.t1 MTR_4g107280 30.128 156 64 4 79 230 88 202 3.14e-14 74.3
MS.gene47936.t1 MTR_5g088350 26.688 311 161 8 80 389 13 257 5.31e-21 95.1
MS.gene47936.t1 MTR_4g006970 23.894 339 186 9 68 405 8 275 8.98e-21 94.7
MS.gene47936.t1 MTR_5g088350 26.367 311 162 8 80 389 13 257 1.45e-20 94.0
MS.gene47936.t1 MTR_2g049790 25.688 327 172 8 80 405 23 279 3.71e-20 93.2
MS.gene47936.t1 MTR_7g072575 26.567 335 174 10 72 405 4 267 4.55e-20 92.8
MS.gene47936.t1 MTR_8g095440 26.471 340 166 11 80 410 30 294 4.56e-20 92.4
MS.gene47936.t1 MTR_8g095440 26.471 340 166 11 80 410 30 294 2.12e-19 90.9
MS.gene47936.t1 MTR_3g466400 26.444 329 166 10 80 405 14 269 4.05e-19 90.1
MS.gene47936.t1 MTR_3g098090 27.900 319 150 12 80 389 32 279 6.52e-19 89.4
MS.gene47936.t1 MTR_6g006770 27.485 342 171 14 71 405 7 278 1.08e-18 89.4
MS.gene47936.t1 MTR_2g100030 27.003 337 186 9 80 405 18 305 1.76e-18 88.2
MS.gene47936.t1 MTR_4g005730 28.070 342 151 13 80 405 24 286 2.91e-18 88.2
MS.gene47936.t1 MTR_6g012990 25.073 343 180 10 77 418 16 282 2.95e-18 86.3
MS.gene47936.t1 MTR_4g005730 28.070 342 151 13 80 405 24 286 3.14e-18 87.8
MS.gene47936.t1 MTR_4g005730 28.070 342 151 13 80 405 24 286 3.14e-18 87.8
MS.gene47936.t1 MTR_6g012990 25.073 343 180 10 77 418 16 282 4.80e-18 86.7
MS.gene47936.t1 MTR_8g086380 25.559 313 162 8 80 389 26 270 6.34e-18 86.7
MS.gene47936.t1 MTR_1g076370 24.451 319 160 10 80 389 20 266 1.20e-17 85.1
MS.gene47936.t1 MTR_6g048250 24.620 329 174 9 77 404 16 271 1.39e-17 84.3
MS.gene47936.t1 MTR_6g048250 24.620 329 174 9 77 404 16 271 2.22e-17 84.3
MS.gene47936.t1 MTR_3g088715 39.252 107 56 3 300 405 28 126 2.74e-17 78.6
MS.gene47936.t1 MTR_6g048250 24.620 329 174 9 77 404 16 271 2.82e-17 84.3
MS.gene47936.t1 MTR_2g045470 24.522 314 164 10 80 389 20 264 6.03e-17 83.2
MS.gene47936.t1 MTR_1g081000 23.962 313 170 8 77 388 1 246 1.03e-16 83.2
MS.gene47936.t1 MTR_1g081000 23.962 313 170 8 77 388 1 246 1.10e-16 82.8
MS.gene47936.t1 MTR_3g072320 23.529 323 177 6 72 393 4 257 1.16e-16 82.0
MS.gene47936.t1 MTR_5g067150 32.895 152 95 4 80 230 9 154 1.77e-16 81.6
MS.gene47936.t1 MTR_7g095450 23.323 313 172 9 77 388 1 246 1.79e-16 82.4
MS.gene47936.t1 MTR_5g067150 32.895 152 95 4 80 230 9 154 1.85e-16 81.3
MS.gene47936.t1 MTR_5g099240 26.708 322 159 13 76 389 91 343 2.09e-16 82.0
MS.gene47936.t1 MTR_5g067150 32.895 152 95 4 80 230 9 154 2.12e-16 80.9
MS.gene47936.t1 MTR_5g099240 26.708 322 159 13 76 389 19 271 2.37e-16 81.6
MS.gene47936.t1 MTR_3g051770 25.065 383 186 17 42 408 49 346 3.21e-16 81.3
MS.gene47936.t1 MTR_8g035890 25.382 327 161 10 70 389 6 256 5.14e-16 78.6
MS.gene47936.t1 MTR_4g128820 33.113 151 96 2 80 230 10 155 6.61e-16 80.1
MS.gene47936.t1 MTR_2g016340 23.125 320 176 8 72 389 4 255 8.81e-16 79.7
MS.gene47936.t1 MTR_6g087000 34.884 129 73 4 297 420 912 1034 2.65e-15 79.0
MS.gene47936.t1 MTR_3g466480 24.522 314 169 8 77 389 18 264 2.77e-15 78.2
MS.gene47936.t1 MTR_2g105010 23.438 320 177 8 71 389 5 257 8.86e-15 76.6
MS.gene47936.t1 MTR_5g075060 23.145 337 181 10 73 405 5 267 9.22e-15 76.6
MS.gene47936.t1 MTR_1g103760 24.478 335 176 12 84 414 16 277 1.07e-14 76.3
MS.gene47936.t1 MTR_8g024600 24.194 310 168 10 80 389 17 259 1.96e-14 75.5
MS.gene47936.t1 MTR_8g024590 30.519 154 102 3 80 233 17 165 5.95e-14 73.9
MS.gene47936.t1 MTR_1g101630 27.119 177 119 5 59 230 19 190 8.04e-14 73.9
MS.gene47936.t1 MTR_5g045190 21.713 327 184 9 80 405 239 494 8.60e-14 74.3
MS.gene47936.t1 MTR_1g080020 31.544 149 95 3 80 227 9 151 9.59e-14 71.6
MS.gene47936.t1 MTR_4g114670 22.630 327 180 9 80 405 11 265 1.39e-13 72.4
MS.gene47936.t1 MTR_3g099767 30.526 190 119 4 43 231 75 252 1.57e-13 72.8
MS.gene47936.t1 MTR_4g114670 22.630 327 180 9 80 405 11 265 1.66e-13 72.8
MS.gene47936.t1 MTR_4g123940 24.551 334 178 9 80 410 26 288 2.14e-13 71.6
MS.gene47936.t1 MTR_7g116390 31.875 160 97 5 72 227 8 159 2.45e-13 70.9
MS.gene47936.t1 MTR_3g095620 34.211 152 85 5 85 230 30 172 2.64e-13 70.5
MS.gene47936.t1 MTR_1g040875 24.528 318 159 10 80 389 24 268 3.78e-13 71.6
MS.gene47936.t1 MTR_4g123940 24.551 334 178 9 80 410 26 288 4.01e-13 71.2
MS.gene47936.t1 MTR_1g096490 32.099 162 96 6 77 231 26 180 4.38e-13 71.6
MS.gene47936.t1 MTR_7g113490 31.293 147 97 2 86 230 74 218 4.63e-13 71.6
MS.gene47936.t1 MTR_4g019410 29.448 163 102 5 79 237 18 171 5.09e-13 71.6
MS.gene47936.t1 MTR_4g019410 29.448 163 102 5 79 237 18 171 6.48e-13 71.2
MS.gene47936.t1 MTR_2g013900 28.205 156 94 4 116 271 211 348 7.84e-13 70.5
MS.gene47936.t1 MTR_1g105290 32.215 149 93 3 86 230 61 205 3.12e-12 68.9
MS.gene47936.t1 MTR_1g105290 32.215 149 93 3 86 230 61 205 4.13e-12 68.6
MS.gene47936.t1 MTR_1g048630 32.237 152 96 5 76 227 3 147 4.21e-12 68.9
MS.gene47936.t1 MTR_4g088745 28.369 141 97 2 131 271 95 231 4.80e-12 67.4
MS.gene47936.t1 MTR_4g088755 28.369 141 97 2 131 271 90 226 4.87e-12 67.4
MS.gene47936.t1 MTR_1g105290 32.215 149 93 3 86 230 61 205 6.45e-12 67.8
MS.gene47936.t1 MTR_4g051648 25.658 152 108 3 80 230 8 155 6.79e-12 68.2
MS.gene47936.t1 MTR_5g075100 29.814 161 106 4 77 236 20 174 1.30e-11 66.6
MS.gene47936.t1 MTR_3g034100 23.121 173 130 2 58 230 61 230 1.46e-11 66.2
MS.gene47936.t1 MTR_8g024100 29.710 138 91 3 79 216 14 145 1.55e-11 67.0
MS.gene47936.t1 MTR_7g092360 25.161 155 111 3 77 230 13 163 1.84e-11 66.6
MS.gene47936.t1 MTR_4g088750 26.950 141 99 2 131 271 251 387 6.37e-11 64.7
MS.gene47936.t1 MTR_1g013700 24.615 195 134 4 72 263 5 189 7.43e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47936.t1 AT2G34650 65.646 457 122 11 8 453 6 438 0.0 582
MS.gene47936.t1 AT5G47750 50.718 418 172 10 52 449 164 567 1.40e-133 397
MS.gene47936.t1 AT2G26700 46.639 476 185 10 8 421 14 482 3.27e-132 392
MS.gene47936.t1 AT4G26610 48.104 422 183 7 15 421 73 473 1.21e-131 390
MS.gene47936.t1 AT5G40030 47.087 412 196 7 52 451 86 487 5.34e-131 388
MS.gene47936.t1 AT5G55910 50.129 389 168 8 52 421 82 463 2.54e-129 384
MS.gene47936.t1 AT5G55910 50.129 389 168 8 52 421 82 463 2.54e-129 384
MS.gene47936.t1 AT3G52890 49.873 395 164 7 52 421 511 896 1.92e-122 379
MS.gene47936.t1 AT3G52890 49.873 395 164 7 52 421 511 896 1.92e-122 379
MS.gene47936.t1 AT3G52890 49.873 395 164 7 52 421 511 896 1.92e-122 379
MS.gene47936.t1 AT3G52890 49.873 395 164 7 52 421 511 896 1.92e-122 379
MS.gene47936.t1 AT1G79250 47.711 415 184 8 52 441 119 525 4.58e-121 364
MS.gene47936.t1 AT1G79250 47.711 415 184 8 52 441 119 525 4.58e-121 364
MS.gene47936.t1 AT1G79250 47.711 415 184 8 52 441 119 525 4.58e-121 364
MS.gene47936.t1 AT1G79250 47.711 415 184 8 52 441 119 525 4.58e-121 364
MS.gene47936.t1 AT5G03640 45.814 430 201 8 14 421 476 895 6.21e-121 375
MS.gene47936.t1 AT5G03640 45.814 430 201 8 14 421 476 895 6.21e-121 375
MS.gene47936.t1 AT3G12690 46.875 416 192 9 45 443 151 554 4.67e-120 362
MS.gene47936.t1 AT3G12690 46.875 416 192 9 45 443 151 554 4.67e-120 362
MS.gene47936.t1 AT3G12690 46.875 416 192 9 45 443 151 554 4.67e-120 362
MS.gene47936.t1 AT1G16440 48.800 375 180 5 52 421 86 453 3.60e-119 357
MS.gene47936.t1 AT3G27580 48.267 404 184 9 50 434 151 548 4.44e-119 360
MS.gene47936.t1 AT3G27580 48.267 404 184 9 50 434 151 548 4.44e-119 360
MS.gene47936.t1 AT2G36350 48.214 392 173 7 52 421 532 915 1.63e-118 369
MS.gene47936.t1 AT2G44830 47.529 425 183 11 52 449 336 747 4.59e-118 363
MS.gene47936.t1 AT2G44830 47.529 425 183 11 52 449 336 747 4.59e-118 363
MS.gene47936.t1 AT2G44830 47.529 425 183 11 52 449 336 747 4.59e-118 363
MS.gene47936.t1 AT1G53700 48.257 373 175 7 54 425 66 421 7.08e-114 343
MS.gene47936.t1 AT3G14370 47.297 370 172 6 54 419 61 411 5.07e-110 333
MS.gene47936.t1 AT3G44610 47.486 358 148 9 85 412 74 421 1.31e-102 313
MS.gene47936.t1 AT5G58140 42.896 366 171 6 53 418 551 878 1.47e-97 313
MS.gene47936.t1 AT5G58140 42.896 366 171 6 53 418 551 878 1.47e-97 313
MS.gene47936.t1 AT5G58140 42.896 366 171 6 53 418 551 878 1.47e-97 313
MS.gene47936.t1 AT5G58140 42.896 366 171 6 53 418 551 878 1.47e-97 313
MS.gene47936.t1 AT5G58140 42.896 366 171 6 53 418 551 878 1.47e-97 313
MS.gene47936.t1 AT5G58140 42.936 361 168 6 53 413 551 873 1.62e-95 307
MS.gene47936.t1 AT3G45780 42.276 369 177 6 52 420 636 968 5.16e-86 283
MS.gene47936.t1 AT3G45780 42.276 369 177 6 52 420 636 968 5.16e-86 283
MS.gene47936.t1 AT1G51170 38.187 364 186 10 75 421 17 358 1.65e-68 224
MS.gene47936.t1 AT3G25250 36.188 362 200 10 70 421 7 347 3.88e-68 223
MS.gene47936.t1 AT3G20830 38.068 352 189 8 83 421 24 359 1.02e-64 214
MS.gene47936.t1 AT4G13000 35.127 353 200 8 74 422 14 341 1.68e-61 204
MS.gene47936.t1 AT1G48490 33.069 378 212 7 58 435 806 1142 8.92e-53 191
MS.gene47936.t1 AT1G48490 33.069 378 212 7 58 435 806 1142 8.92e-53 191
MS.gene47936.t1 AT1G48490 33.069 378 212 7 58 435 806 1142 8.92e-53 191
MS.gene47936.t1 AT1G48490 33.069 378 212 7 58 435 807 1143 9.27e-53 191
MS.gene47936.t1 AT3G17850 32.987 385 221 8 58 441 860 1208 8.29e-52 189
MS.gene47936.t1 AT5G62310 33.333 363 206 9 70 432 744 1070 2.87e-50 184
MS.gene47936.t1 AT1G45160 33.154 371 209 8 72 442 662 993 2.30e-49 181
MS.gene47936.t1 AT1G45160 33.154 371 209 8 72 442 662 993 2.63e-49 181
MS.gene47936.t1 AT3G08720 32.958 355 164 9 73 426 133 414 6.66e-49 174
MS.gene47936.t1 AT3G08720 32.958 355 164 9 73 426 133 414 6.66e-49 174
MS.gene47936.t1 AT3G08720 32.958 355 164 9 73 426 133 414 6.66e-49 174
MS.gene47936.t1 AT3G08720 32.958 355 164 9 73 426 133 414 6.66e-49 174
MS.gene47936.t1 AT3G10540 30.978 368 186 9 55 420 27 328 1.01e-48 174
MS.gene47936.t1 AT3G08730 31.250 368 177 11 63 424 117 414 2.70e-48 172
MS.gene47936.t1 AT3G08730 31.250 368 177 11 63 424 117 414 2.70e-48 172
MS.gene47936.t1 AT5G04510 30.933 375 197 10 49 420 12 327 6.84e-47 167
MS.gene47936.t1 AT5G04510 30.933 375 197 10 49 420 12 327 4.04e-46 167
MS.gene47936.t1 AT4G33080 31.805 349 198 11 71 407 85 405 4.85e-46 167
MS.gene47936.t1 AT4G33080 31.805 349 198 11 71 407 85 405 6.03e-46 167
MS.gene47936.t1 AT1G30640 30.986 355 216 11 71 421 18 347 6.29e-42 155
MS.gene47936.t1 AT4G14350 30.508 354 217 10 70 421 109 435 8.72e-42 156
MS.gene47936.t1 AT4G14350 30.508 354 217 10 70 421 109 435 1.13e-41 155
MS.gene47936.t1 AT4G14350 30.508 354 217 10 70 421 109 435 1.13e-41 155
MS.gene47936.t1 AT4G14350 30.508 354 217 10 70 421 109 435 1.13e-41 155
MS.gene47936.t1 AT1G30640 30.986 355 216 11 71 421 111 440 1.90e-41 155
MS.gene47936.t1 AT1G30640 30.986 355 216 11 71 421 111 440 1.90e-41 155
MS.gene47936.t1 AT2G20470 31.844 358 203 10 71 421 115 438 7.78e-41 153
MS.gene47936.t1 AT2G20470 31.844 358 203 10 71 421 115 438 1.42e-40 153
MS.gene47936.t1 AT2G20470 31.844 358 203 10 71 421 115 438 1.42e-40 153
MS.gene47936.t1 AT2G19400 31.897 348 198 11 72 407 97 417 1.92e-40 152
MS.gene47936.t1 AT1G03920 31.594 345 206 10 79 421 23 339 1.94e-40 150
MS.gene47936.t1 AT3G23310 30.056 356 218 11 70 421 110 438 3.83e-40 152
MS.gene47936.t1 AT1G03920 31.594 345 206 10 79 421 136 452 5.21e-40 151
MS.gene47936.t1 AT1G03920 31.594 345 206 10 79 421 136 452 5.21e-40 151
MS.gene47936.t1 AT5G09890 32.749 342 196 13 70 406 94 406 1.10e-39 149
MS.gene47936.t1 AT5G09890 32.749 342 196 13 70 406 94 406 1.18e-39 149
MS.gene47936.t1 AT5G04510 30.746 335 171 9 49 381 12 287 4.70e-38 140
MS.gene47936.t1 AT2G25880 27.027 333 172 6 59 390 17 279 1.18e-26 109
MS.gene47936.t1 AT2G25880 27.532 316 158 6 76 390 82 327 4.43e-26 108
MS.gene47936.t1 AT2G25880 27.532 316 158 6 76 390 21 266 1.22e-25 106
MS.gene47936.t1 AT4G32830 26.984 315 159 6 76 389 27 271 3.20e-25 105
MS.gene47936.t1 AT5G58140 37.037 135 81 2 53 187 551 681 3.98e-23 102
MS.gene47936.t1 AT2G45490 27.864 323 146 11 76 389 18 262 7.70e-22 95.5
MS.gene47936.t1 AT3G53930 26.866 335 172 12 59 389 1 266 1.38e-21 98.2
MS.gene47936.t1 AT3G53930 26.866 335 172 12 59 389 1 266 1.47e-21 98.2
MS.gene47936.t1 AT5G18700 37.013 154 86 3 77 230 1 143 1.48e-21 98.6
MS.gene47936.t1 AT5G57630 25.080 311 162 8 80 389 12 252 2.20e-21 96.3
MS.gene47936.t1 AT4G24400 27.134 328 162 11 80 404 9 262 3.66e-21 95.9
MS.gene47936.t1 AT3G10660 25.843 356 183 12 44 389 149 433 3.73e-21 97.1
MS.gene47936.t1 AT3G10660 25.843 356 183 12 44 389 149 433 3.73e-21 97.1
MS.gene47936.t1 AT4G24400 27.134 328 162 11 80 404 9 262 4.86e-21 95.5
MS.gene47936.t1 AT5G57630 25.080 311 162 8 80 389 12 252 1.06e-20 94.4
MS.gene47936.t1 AT1G30270 25.688 327 172 8 80 405 31 287 1.35e-20 94.7
MS.gene47936.t1 AT1G30270 25.688 327 172 8 80 405 31 287 1.35e-20 94.4
MS.gene47936.t1 AT5G45810 27.458 295 147 7 73 362 21 253 1.57e-20 94.4
MS.gene47936.t1 AT4G29810 26.286 350 171 10 75 410 65 341 4.01e-20 92.0
MS.gene47936.t1 AT4G29810 26.286 350 171 10 75 410 74 350 4.32e-20 92.0
MS.gene47936.t1 AT5G10930 27.044 318 161 9 75 389 7 256 7.36e-20 92.0
MS.gene47936.t1 AT3G23000 25.749 334 163 12 80 405 25 281 9.42e-20 91.7
MS.gene47936.t1 AT5G39440 26.102 295 148 7 110 404 46 270 1.59e-19 91.3
MS.gene47936.t1 AT4G18700 26.625 323 159 8 73 389 19 269 1.69e-19 91.3
MS.gene47936.t1 AT4G35310 27.143 350 174 14 76 417 92 368 2.73e-19 90.9
MS.gene47936.t1 AT4G35310 27.143 350 174 14 76 417 92 368 2.73e-19 90.9
MS.gene47936.t1 AT5G01810 24.926 337 180 9 70 405 3 267 3.98e-19 89.4
MS.gene47936.t1 AT5G01810 24.926 337 180 9 70 405 3 267 5.29e-19 89.4
MS.gene47936.t1 AT5G01810 24.926 337 180 9 70 405 3 267 5.29e-19 89.4
MS.gene47936.t1 AT3G01090 24.924 329 173 9 79 406 18 273 5.32e-19 89.7
MS.gene47936.t1 AT3G01090 24.924 329 173 9 79 406 18 273 5.32e-19 89.7
MS.gene47936.t1 AT2G20050 37.288 118 67 2 297 412 931 1043 5.36e-19 90.5
MS.gene47936.t1 AT2G20050 35.714 126 74 2 289 412 926 1046 5.51e-19 90.5
MS.gene47936.t1 AT3G29160 25.402 311 160 9 110 419 47 286 6.01e-19 88.6
MS.gene47936.t1 AT3G01090 24.924 329 173 9 79 406 41 296 6.42e-19 89.7
MS.gene47936.t1 AT4G29810 25.915 328 165 8 75 393 74 332 1.10e-18 87.4
MS.gene47936.t1 AT3G17510 25.767 326 165 9 70 389 10 264 1.30e-18 88.2
MS.gene47936.t1 AT3G29160 25.402 311 160 9 110 419 47 286 1.62e-18 88.6
MS.gene47936.t1 AT3G29160 25.402 311 160 9 110 419 47 286 1.62e-18 88.6
MS.gene47936.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.04e-18 88.6
MS.gene47936.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.04e-18 88.6
MS.gene47936.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.04e-18 88.6
MS.gene47936.t1 AT1G54510 23.529 357 194 11 77 425 1 286 2.04e-18 88.6
MS.gene47936.t1 AT2G45490 32.903 155 99 2 79 233 21 170 2.10e-18 85.1
MS.gene47936.t1 AT2G17290 26.857 350 175 14 76 417 80 356 1.39e-17 85.5
MS.gene47936.t1 AT2G17290 26.857 350 175 14 76 417 80 356 1.39e-17 85.5
MS.gene47936.t1 AT3G63280 24.074 324 178 8 66 388 44 300 1.74e-17 85.5
MS.gene47936.t1 AT4G14580 25.000 320 156 10 80 389 21 266 3.02e-17 84.0
MS.gene47936.t1 AT5G45820 24.299 321 173 8 71 389 3 255 3.24e-17 84.0
MS.gene47936.t1 AT1G12680 33.117 154 90 4 79 231 106 247 6.05e-17 83.6
MS.gene47936.t1 AT3G63280 24.194 310 167 8 80 388 4 246 7.62e-17 83.6
MS.gene47936.t1 AT3G63280 24.194 310 167 8 80 388 4 246 7.62e-17 83.6
MS.gene47936.t1 AT3G63280 24.194 310 167 8 80 388 4 246 7.62e-17 83.6
MS.gene47936.t1 AT1G29230 24.465 327 175 9 80 405 74 329 1.45e-16 82.4
MS.gene47936.t1 AT1G48260 25.753 299 152 8 109 405 37 267 1.87e-16 81.6
MS.gene47936.t1 AT5G14720 26.822 343 174 15 70 405 6 278 2.11e-16 82.4
MS.gene47936.t1 AT5G14720 26.822 343 174 15 70 405 6 278 2.11e-16 82.4
MS.gene47936.t1 AT5G21326 32.099 162 96 4 84 236 8 164 3.42e-16 80.9
MS.gene47936.t1 AT3G04810 23.975 317 165 12 77 388 1 246 4.16e-16 81.3
MS.gene47936.t1 AT3G04810 23.975 317 165 12 77 388 1 246 4.16e-16 81.3
MS.gene47936.t1 AT3G04810 23.975 317 165 12 77 388 1 246 4.16e-16 81.3
MS.gene47936.t1 AT5G28290 24.281 313 163 11 80 388 4 246 4.34e-16 80.9
MS.gene47936.t1 AT5G28290 24.281 313 163 11 80 388 4 246 5.10e-16 80.9
MS.gene47936.t1 AT5G28290 24.281 313 163 11 80 388 4 246 5.10e-16 80.9
MS.gene47936.t1 AT2G26980 30.058 173 116 3 64 236 8 175 7.15e-16 80.1
MS.gene47936.t1 AT2G26980 31.847 157 102 3 80 236 14 165 9.95e-16 77.4
MS.gene47936.t1 AT2G26980 31.847 157 102 3 80 236 14 165 1.30e-15 78.6
MS.gene47936.t1 AT2G26980 31.847 157 102 3 80 236 14 165 1.34e-15 79.0
MS.gene47936.t1 AT5G25110 26.032 315 167 11 75 389 38 286 1.67e-15 79.0
MS.gene47936.t1 AT2G25090 30.247 162 105 4 71 230 6 161 1.81e-15 79.0
MS.gene47936.t1 AT2G26980 31.847 157 102 3 80 236 14 165 2.32e-15 78.2
MS.gene47936.t1 AT5G35410 31.579 152 97 3 80 230 11 156 3.36e-15 77.4
MS.gene47936.t1 AT5G35410 31.579 152 97 3 80 230 11 156 6.41e-15 77.0
MS.gene47936.t1 AT1G70430 33.129 163 94 5 75 232 11 163 9.98e-15 77.0
MS.gene47936.t1 AT2G34180 28.485 165 112 2 72 236 49 207 1.02e-14 76.6
MS.gene47936.t1 AT1G70430 33.129 163 94 5 75 232 11 163 1.24e-14 76.6
MS.gene47936.t1 AT1G70430 33.129 163 94 5 75 232 11 163 1.30e-14 76.6
MS.gene47936.t1 AT5G24430 24.118 340 182 9 80 412 143 413 1.37e-14 76.6
MS.gene47936.t1 AT1G23700 26.250 320 157 10 75 388 11 257 1.42e-14 75.5
MS.gene47936.t1 AT2G25880 42.105 95 50 2 297 390 144 234 1.65e-14 73.6
MS.gene47936.t1 AT3G61960 31.293 147 95 3 72 218 2 142 1.80e-14 76.3
MS.gene47936.t1 AT3G61960 31.293 147 95 3 72 218 2 142 1.94e-14 75.9
MS.gene47936.t1 AT1G23700 25.705 319 160 10 75 388 11 257 2.02e-14 75.5
MS.gene47936.t1 AT1G73500 31.169 154 94 4 79 230 46 189 2.04e-14 74.3
MS.gene47936.t1 AT3G49370 25.513 341 176 11 80 412 142 412 2.29e-14 75.9
MS.gene47936.t1 AT1G23700 26.562 320 156 12 75 388 11 257 2.30e-14 75.5
MS.gene47936.t1 AT1G54960 32.544 169 103 5 66 230 57 218 4.78e-14 74.7
MS.gene47936.t1 AT1G54960 32.544 169 103 5 66 230 57 218 4.78e-14 74.7
MS.gene47936.t1 AT1G32320 29.412 187 119 4 46 230 12 187 7.36e-14 72.4
MS.gene47936.t1 AT1G35670 32.716 162 95 6 77 231 22 176 1.38e-13 73.2
MS.gene47936.t1 AT4G14480 32.680 153 95 3 80 230 15 161 2.84e-13 72.0
MS.gene47936.t1 AT4G18950 24.280 243 122 5 110 349 182 365 3.39e-13 71.6
MS.gene47936.t1 AT4G30960 24.759 311 166 8 80 389 24 267 4.10e-13 71.2
MS.gene47936.t1 AT4G32660 25.485 361 196 13 36 374 19 328 4.68e-13 70.9
MS.gene47936.t1 AT4G32660 26.316 361 193 13 36 374 19 328 4.87e-13 70.9
MS.gene47936.t1 AT4G18950 24.280 243 122 5 110 349 182 365 4.95e-13 71.2
MS.gene47936.t1 AT1G01140 28.070 171 114 3 70 236 5 170 5.07e-13 71.2
MS.gene47936.t1 AT3G06030 31.293 147 97 2 86 230 74 218 5.28e-13 71.6
MS.gene47936.t1 AT1G09000 34.228 149 90 4 86 230 75 219 5.28e-13 71.6
MS.gene47936.t1 AT4G09570 33.540 161 95 6 77 231 21 175 5.41e-13 71.2
MS.gene47936.t1 AT1G01140 28.070 171 114 3 70 236 5 170 5.51e-13 70.9
MS.gene47936.t1 AT4G32660 26.316 361 193 13 36 374 11 320 5.67e-13 70.9
MS.gene47936.t1 AT1G01140 28.070 171 114 3 70 236 5 170 6.05e-13 70.9
MS.gene47936.t1 AT1G09000 34.228 149 90 4 86 230 75 219 6.06e-13 71.2
MS.gene47936.t1 AT5G07070 24.189 339 183 10 73 409 6 272 1.05e-12 70.1
MS.gene47936.t1 AT2G30360 30.488 164 102 4 77 236 18 173 1.37e-12 69.7
MS.gene47936.t1 AT2G46700 29.231 195 116 7 44 230 116 296 2.03e-12 69.7
MS.gene47936.t1 AT1G50240 32.026 153 97 5 75 227 1 146 2.94e-12 69.7
MS.gene47936.t1 AT1G50240 32.026 153 97 5 75 227 1 146 2.94e-12 69.7
MS.gene47936.t1 AT5G58950 31.206 141 79 4 93 230 232 357 4.34e-12 68.6
MS.gene47936.t1 AT5G21222 31.405 121 79 2 110 229 40 157 6.23e-12 68.6
MS.gene47936.t1 AT5G21222 31.405 121 79 2 110 229 40 157 6.23e-12 68.6
MS.gene47936.t1 AT5G21222 31.405 121 79 2 110 229 40 157 6.23e-12 68.6
MS.gene47936.t1 AT5G21222 31.405 121 79 2 110 229 40 157 6.23e-12 68.6
MS.gene47936.t1 AT1G18350 28.750 160 102 4 73 230 38 187 8.60e-12 66.2
MS.gene47936.t1 AT3G04530 30.275 109 71 2 300 408 170 273 1.87e-11 65.1
MS.gene47936.t1 AT3G44200 25.658 152 108 3 80 230 8 155 1.88e-11 67.0
MS.gene47936.t1 AT3G44200 25.658 152 108 3 80 230 8 155 1.88e-11 67.0
MS.gene47936.t1 AT1G08650 34.783 92 59 1 302 393 176 266 2.08e-11 65.1
MS.gene47936.t1 AT1G08650 34.783 92 59 1 302 393 176 266 2.11e-11 64.7
MS.gene47936.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.81e-11 66.2
MS.gene47936.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.84e-11 66.2
MS.gene47936.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.89e-11 66.2
MS.gene47936.t1 AT1G53570 27.397 146 101 4 86 230 220 361 2.89e-11 66.2
MS.gene47936.t1 AT5G57565 36.538 104 50 3 151 245 18 114 3.10e-11 61.2
MS.gene47936.t1 AT5G57565 36.538 104 50 3 151 245 18 114 3.10e-11 61.2
MS.gene47936.t1 AT1G53570 27.397 146 101 4 86 230 220 361 3.34e-11 65.9
MS.gene47936.t1 AT1G53570 27.397 146 101 4 86 230 220 361 3.39e-11 65.9
MS.gene47936.t1 AT2G38490 31.325 166 105 5 72 236 21 178 7.96e-11 64.3

Find 114 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGTTGCCGTGGGAGTTTC+CGG 0.194727 4.1:+11319594 None:intergenic
GATTTCCGGGTTACTTAATA+AGG 0.206097 4.1:-11319407 MS.gene47936:CDS
TACGCGCGGGATTTGATTTC+CGG 0.208835 4.1:-11319421 MS.gene47936:CDS
TCATTTCTCTTGCATTGTTA+TGG 0.264166 4.1:-11320174 MS.gene47936:CDS
GCCCGCTCTTGTTCATTTGT+TGG 0.268785 4.1:-11319649 MS.gene47936:CDS
TTTATCTATGAACTTATTTA+CGG 0.276743 4.1:-11319547 MS.gene47936:CDS
GTAGTAATAGCAATAGTAGT+AGG 0.292562 4.1:-11319228 MS.gene47936:CDS
GAGTTTCCGGCGGCAACTTC+CGG 0.325096 4.1:+11319607 None:intergenic
GCCGTGGATTGGTGGTCGTT+TGG 0.326507 4.1:-11319574 MS.gene47936:CDS
GTTTGCGGCTCCATCGAATA+AGG 0.328263 4.1:-11319515 MS.gene47936:CDS
TTTCTTGAGCCAGGAACTTC+AGG 0.341156 4.1:+11319283 None:intergenic
GAAATCACATAGAGCTGAAA+TGG 0.348283 4.1:-11320264 MS.gene47936:CDS
TTCAAGCGTGCTTGAGGCCG+TGG 0.353163 4.1:+11319447 None:intergenic
CCGTGGATTGGTGGTCGTTT+GGG 0.365851 4.1:-11319573 MS.gene47936:CDS
TTAACGCCGCCTGAAGTTCC+TGG 0.377497 4.1:-11319292 MS.gene47936:CDS
CCTTACGTGACTTGAATAAC+CGG 0.404078 4.1:+11319719 None:intergenic
TTACGGTCGTACTCCGTTTG+CGG 0.414214 4.1:-11319530 MS.gene47936:CDS
CGTATCGGCGCCGGAGATAT+AGG 0.415019 4.1:-11320380 MS.gene47936:CDS
TTCAAACCGTTCAACCAAAC+CGG 0.428406 4.1:-11319696 MS.gene47936:CDS
TGTTGTACCATGTTAGAAAC+TGG 0.428557 4.1:-11320641 None:intergenic
GCATAGAGTGTAGGAAGAAA+AGG 0.432484 4.1:+11320212 None:intergenic
GTGAGGGTGTTTGTGGCGTA+TGG 0.435424 4.1:+11320124 None:intergenic
CGCAGTGTTTCCTTATTCGA+TGG 0.435512 4.1:+11319505 None:intergenic
TTATCTGATGATTCAACGGC+TGG 0.439572 4.1:+11319826 None:intergenic
TAGTAATAGCAATAGTAGTA+GGG 0.453024 4.1:-11319227 MS.gene47936:CDS
CGGAGGAGCGGTGAGGTTTG+AGG 0.456818 4.1:+11320483 None:intergenic
GAACAAGAGCGGGCAGAAAC+CGG 0.457262 4.1:+11319658 None:intergenic
GGAGGAGCGGTGAGGTTTGA+GGG 0.457418 4.1:+11320484 None:intergenic
ACGCGCGGGATTTGATTTCC+GGG 0.459360 4.1:-11319420 MS.gene47936:CDS
GATGGCGGAGTAAGCGAAAT+CGG 0.465677 4.1:+11320463 None:intergenic
CTTCGTTTCTGAGGCGGCAG+AGG 0.467146 4.1:+11320348 None:intergenic
CTATATCTCCGGCGCCGATA+CGG 0.467445 4.1:+11320381 None:intergenic
CGACCTTCTTCCGCCTTCAC+CGG 0.471504 4.1:-11320516 MS.gene47936:CDS
GATCGAACTAACACATTCTC+AGG 0.472536 4.1:+11319904 None:intergenic
CGGCGCCGATACGGCGGAGG+AGG 0.472990 4.1:+11320390 None:intergenic
TTATTCGATGGAGCCGCAAA+CGG 0.483287 4.1:+11319517 None:intergenic
CACTTGTTTGTATGCGATGA+AGG 0.483898 4.1:-11320318 MS.gene47936:CDS
GACGGTTGTGAGGGTGTTTG+TGG 0.483934 4.1:+11320117 None:intergenic
ACCAATCCACGGCGTTGCCG+TGG 0.489785 4.1:+11319584 None:intergenic
CCCACGGCAACGCCGTGGAT+TGG 0.491974 4.1:-11319585 MS.gene47936:CDS
AGTAATAGCAATAGTAGTAG+GGG 0.503772 4.1:-11319226 MS.gene47936:CDS
ACGGCAACGCCGTGGATTGG+TGG 0.504904 4.1:-11319582 MS.gene47936:CDS
CTCCTCCGCCGTATCGGCGC+CGG 0.505028 4.1:-11320389 MS.gene47936:CDS
ATTTACCTAGCGGAAGTAAG+AGG 0.510467 4.1:+11320092 None:intergenic
GGTTTGAGGGAGAGACTCTC+CGG 0.513127 4.1:+11320497 None:intergenic
GTGGGTGTTGGAAAAGTAAG+AGG 0.513288 4.1:+11319466 None:intergenic
TTTCACCTCCTCCGCCGTAT+CGG 0.514538 4.1:-11320395 MS.gene47936:CDS
GTGCTTGAGGCCGTGGGTGT+TGG 0.516685 4.1:+11319454 None:intergenic
GAATGGTGTAGGAAAAGAAC+GGG 0.518949 4.1:+11319756 None:intergenic
TCTCCGGTGAAGGCGGAAGA+AGG 0.524425 4.1:+11320513 None:intergenic
CTCCGGCGCCGATACGGCGG+AGG 0.524516 4.1:+11320387 None:intergenic
AGCGGAAGTATTGGTGGCAT+TGG 0.529444 4.1:-11319968 MS.gene47936:CDS
GTAAACAGTGCCTATATCTC+CGG 0.533869 4.1:+11320370 None:intergenic
TGTCATCTTCTTCGTTTCTG+AGG 0.535049 4.1:+11320339 None:intergenic
TCCAACAAATGAACAAGAGC+GGG 0.536839 4.1:+11319648 None:intergenic
TAAATTATCTGATGATTCAA+CGG 0.538115 4.1:+11319822 None:intergenic
CAACGACTCGGGTCTAAACG+TGG 0.539047 4.1:-11319376 MS.gene47936:CDS
TAAGAGGAAGACGGTTGTGA+GGG 0.539144 4.1:+11320108 None:intergenic
TTATGCAGCGGAAGTATTGG+TGG 0.540414 4.1:-11319974 MS.gene47936:CDS
CGGATCCTTATTAAGTAACC+CGG 0.541564 4.1:+11319402 None:intergenic
TTTGTATGCGATGAAGGTTG+TGG 0.541682 4.1:-11320312 MS.gene47936:CDS
TTGGAGTACCTTCACATGCT+AGG 0.543818 4.1:-11319949 MS.gene47936:CDS
GTAAGAGGAAGACGGTTGTG+AGG 0.548424 4.1:+11320107 None:intergenic
CGGTTTGAAAAGCAAGTGAA+TGG 0.548672 4.1:+11319739 None:intergenic
GAAAAGCAAGTGAATGGTGT+AGG 0.548777 4.1:+11319745 None:intergenic
CCGGTTATTCAAGTCACGTA+AGG 0.551242 4.1:-11319719 MS.gene47936:CDS
AGGATCCGACTCAACGACTC+GGG 0.561444 4.1:-11319387 MS.gene47936:CDS
GTCTCGCCGGAAGTTGCCGC+CGG 0.563258 4.1:-11319613 MS.gene47936:CDS
AGAACGGGAACGAGTGTAGG+AGG 0.569045 4.1:+11319771 None:intergenic
AGGGAGAGACTCTCCGGTGA+AGG 0.570898 4.1:+11320503 None:intergenic
ATGTGAGAGCGGACTTGCGA+CGG 0.580197 4.1:+11320426 None:intergenic
CATCTTCTTCGTTTCTGAGG+CGG 0.581374 4.1:+11320342 None:intergenic
TCAAACTCAGCATAGAGTGT+AGG 0.584379 4.1:+11320203 None:intergenic
GTAGAGTTCAAGCGTGCTTG+AGG 0.584583 4.1:+11319441 None:intergenic
TCAAGCGTGCTTGAGGCCGT+GGG 0.588656 4.1:+11319448 None:intergenic
AAAAGAACGGGAACGAGTGT+AGG 0.591056 4.1:+11319768 None:intergenic
TATCTCCGGCGCCGATACGG+CGG 0.593136 4.1:+11320384 None:intergenic
AACACATGAATATGTCTCGC+CGG 0.593503 4.1:-11319626 MS.gene47936:CDS
GAGAGACTCTCCGGTGAAGG+CGG 0.595659 4.1:+11320506 None:intergenic
TATCTGATGATTCAACGGCT+GGG 0.596183 4.1:+11319827 None:intergenic
GAAGGTAGCGGAACGGATGG+CGG 0.596507 4.1:+11320448 None:intergenic
CCAATCCACGGCGTTGCCGT+GGG 0.598052 4.1:+11319585 None:intergenic
ACGGAAGGTAGCGGAACGGA+TGG 0.603297 4.1:+11320445 None:intergenic
CACGCTTGAACTCTACGCGC+GGG 0.603495 4.1:-11319434 MS.gene47936:CDS
CCCAAACGACCACCAATCCA+CGG 0.607776 4.1:+11319573 None:intergenic
GGACTTGCGACGGAAGGTAG+CGG 0.609884 4.1:+11320436 None:intergenic
TATGGAATGCAAGTCACCAC+CGG 0.613302 4.1:+11320142 None:intergenic
AAACTCCCACGGCAACGCCG+TGG 0.617090 4.1:-11319590 MS.gene47936:CDS
AAGGATCCGACTCAACGACT+CGG 0.623405 4.1:-11319388 MS.gene47936:CDS
GTTGCCGCCGGAAACTCCCA+CGG 0.625351 4.1:-11319601 MS.gene47936:CDS
CTTGAGCCAGGAACTTCAGG+CGG 0.630339 4.1:+11319286 None:intergenic
GTTGCCGTGGGAGTTTCCGG+CGG 0.640921 4.1:+11319597 None:intergenic
TTCCAACAAATGAACAAGAG+CGG 0.641367 4.1:+11319647 None:intergenic
TTAGACCCGAGTCGTTGAGT+CGG 0.643231 4.1:+11319382 None:intergenic
AATGTGTTAGTTCGATCAGA+CGG 0.646609 4.1:-11319898 MS.gene47936:CDS
GATGAAGGTTGTGGATAAAG+AGG 0.646934 4.1:-11320303 MS.gene47936:CDS
AAATGATTCCTAGCATGTGA+AGG 0.647952 4.1:+11319941 None:intergenic
GAAGAAGGTCGAATGAAAGA+CGG 0.658019 4.1:+11320528 None:intergenic
GCACGCTTGAACTCTACGCG+CGG 0.659257 4.1:-11319435 MS.gene47936:CDS
GCGAAATCGGAGGAGCGGTG+AGG 0.659282 4.1:+11320476 None:intergenic
TGAATGGTGTAGGAAAAGAA+CGG 0.666750 4.1:+11319755 None:intergenic
GGCGGAGGAGGTGAAAGTCA+CGG 0.667380 4.1:+11320402 None:intergenic
GTCTTCCTCTTACTTCCGCT+AGG 0.667703 4.1:-11320097 MS.gene47936:intron
ACTCGGGTCTAAACGTGGGT+CGG 0.670437 4.1:-11319371 MS.gene47936:CDS
GAGAGCGGACTTGCGACGGA+AGG 0.672834 4.1:+11320430 None:intergenic
TAGCGGAAGTAAGAGGAAGA+CGG 0.675534 4.1:+11320099 None:intergenic
GTAATAGCAATAGTAGTAGG+GGG 0.678715 4.1:-11319225 MS.gene47936:CDS
AACGACTCGGGTCTAAACGT+GGG 0.679805 4.1:-11319375 MS.gene47936:CDS
ACGTGCACCAGTTTCTAACA+TGG 0.682148 4.1:+11320634 None:intergenic
AAAGTCACGGAATGTGAGAG+CGG 0.682400 4.1:+11320415 None:intergenic
AGTAAGCGAAATCGGAGGAG+CGG 0.691815 4.1:+11320471 None:intergenic
GAACGGGAACGAGTGTAGGA+GGG 0.698412 4.1:+11319772 None:intergenic
TGCGACGGAAGGTAGCGGAA+CGG 0.710050 4.1:+11320441 None:intergenic
GGCGGAGTAAGCGAAATCGG+AGG 0.717415 4.1:+11320466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCTATGAACTTATTTA+CGG - chr4.1:11320277-11320296 MS.gene47936:CDS 15.0%
!! TAAATTATCTGATGATTCAA+CGG + chr4.1:11320005-11320024 None:intergenic 20.0%
!!! GTTTTTTAAAGGGATTAATT+TGG - chr4.1:11320495-11320514 MS.gene47936:CDS 20.0%
! TAGTAATAGCAATAGTAGTA+GGG - chr4.1:11320597-11320616 MS.gene47936:CDS 25.0%
!! ATTGTTATGGAATTTTGTTC+CGG - chr4.1:11319663-11319682 MS.gene47936:CDS 25.0%
!!! AAGAAGCATTCGTTTTTTAA+AGG - chr4.1:11320484-11320503 MS.gene47936:CDS 25.0%
!!! AGAAGCATTCGTTTTTTAAA+GGG - chr4.1:11320485-11320504 MS.gene47936:CDS 25.0%
AGTAATAGCAATAGTAGTAG+GGG - chr4.1:11320598-11320617 MS.gene47936:CDS 30.0%
GTAGTAATAGCAATAGTAGT+AGG - chr4.1:11320596-11320615 MS.gene47936:CDS 30.0%
TCATTTCTCTTGCATTGTTA+TGG - chr4.1:11319650-11319669 MS.gene47936:CDS 30.0%
! TGATAAAACGACATCGTTTT+TGG + chr4.1:11320568-11320587 None:intergenic 30.0%
!!! AAAACGATGTCGTTTTATCA+TGG - chr4.1:11320568-11320587 MS.gene47936:CDS 30.0%
!!! AAACGATGTCGTTTTATCAT+GGG - chr4.1:11320569-11320588 MS.gene47936:CDS 30.0%
AAATGATTCCTAGCATGTGA+AGG + chr4.1:11319886-11319905 None:intergenic 35.0%
AATGTGTTAGTTCGATCAGA+CGG - chr4.1:11319926-11319945 MS.gene47936:CDS 35.0%
GAAATCACATAGAGCTGAAA+TGG - chr4.1:11319560-11319579 MS.gene47936:CDS 35.0%
GATTTCCGGGTTACTTAATA+AGG - chr4.1:11320417-11320436 MS.gene47936:CDS 35.0%
GTAATAGCAATAGTAGTAGG+GGG - chr4.1:11320599-11320618 MS.gene47936:CDS 35.0%
TGAATGGTGTAGGAAAAGAA+CGG + chr4.1:11320072-11320091 None:intergenic 35.0%
TTCCAACAAATGAACAAGAG+CGG + chr4.1:11320180-11320199 None:intergenic 35.0%
! GGGTAATGTTGATGAAAAAG+TGG + chr4.1:11320035-11320054 None:intergenic 35.0%
! GTTACTCAGATTTTATGCAG+CGG - chr4.1:11319838-11319857 MS.gene47936:CDS 35.0%
!! ATTTTATGCAGCGGAAGTAT+TGG - chr4.1:11319847-11319866 MS.gene47936:CDS 35.0%
!! CATTCACTTGCTTTTCAAAC+CGG - chr4.1:11320086-11320105 MS.gene47936:intron 35.0%
!!! ATGTCGTTTTATCATGGGAA+GGG - chr4.1:11320574-11320593 MS.gene47936:CDS 35.0%
!!! GTTTTGAGAGATTTACCTAG+CGG + chr4.1:11319745-11319764 None:intergenic 35.0%
AACACATGAATATGTCTCGC+CGG - chr4.1:11320198-11320217 MS.gene47936:CDS 40.0%
ATTTACCTAGCGGAAGTAAG+AGG + chr4.1:11319735-11319754 None:intergenic 40.0%
CACTTGTTTGTATGCGATGA+AGG - chr4.1:11319506-11319525 MS.gene47936:CDS 40.0%
CCTTACGTGACTTGAATAAC+CGG + chr4.1:11320108-11320127 None:intergenic 40.0%
CGGATCCTTATTAAGTAACC+CGG + chr4.1:11320425-11320444 None:intergenic 40.0%
CGGTTTGAAAAGCAAGTGAA+TGG + chr4.1:11320088-11320107 None:intergenic 40.0%
GAAAAGCAAGTGAATGGTGT+AGG + chr4.1:11320082-11320101 None:intergenic 40.0%
GAAGAAGGTCGAATGAAAGA+CGG + chr4.1:11319299-11319318 None:intergenic 40.0%
GAATGGTGTAGGAAAAGAAC+GGG + chr4.1:11320071-11320090 None:intergenic 40.0%
GATCGAACTAACACATTCTC+AGG + chr4.1:11319923-11319942 None:intergenic 40.0%
GATGAAGGTTGTGGATAAAG+AGG - chr4.1:11319521-11319540 MS.gene47936:CDS 40.0%
GCATAGAGTGTAGGAAGAAA+AGG + chr4.1:11319615-11319634 None:intergenic 40.0%
GTAAACAGTGCCTATATCTC+CGG + chr4.1:11319457-11319476 None:intergenic 40.0%
TATCTGATGATTCAACGGCT+GGG + chr4.1:11320000-11320019 None:intergenic 40.0%
TCAAACTCAGCATAGAGTGT+AGG + chr4.1:11319624-11319643 None:intergenic 40.0%
TCCAACAAATGAACAAGAGC+GGG + chr4.1:11320179-11320198 None:intergenic 40.0%
TGTCATCTTCTTCGTTTCTG+AGG + chr4.1:11319488-11319507 None:intergenic 40.0%
TTATCTGATGATTCAACGGC+TGG + chr4.1:11320001-11320020 None:intergenic 40.0%
TTCAAACCGTTCAACCAAAC+CGG - chr4.1:11320128-11320147 MS.gene47936:CDS 40.0%
TTTGTATGCGATGAAGGTTG+TGG - chr4.1:11319512-11319531 MS.gene47936:CDS 40.0%
! GTTATGGAATTTTGTTCCGG+TGG - chr4.1:11319666-11319685 MS.gene47936:CDS 40.0%
!! AAAAAGCCGGTTTGGTTGAA+CGG + chr4.1:11320137-11320156 None:intergenic 40.0%
!! TCTTACTTTTCCAACACCCA+CGG - chr4.1:11320360-11320379 MS.gene47936:CDS 40.0%
!!! GATGTCGTTTTATCATGGGA+AGG - chr4.1:11320573-11320592 MS.gene47936:CDS 40.0%
AAAAGAACGGGAACGAGTGT+AGG + chr4.1:11320059-11320078 None:intergenic 45.0%
AAAGTCACGGAATGTGAGAG+CGG + chr4.1:11319412-11319431 None:intergenic 45.0%
CCGGTTATTCAAGTCACGTA+AGG - chr4.1:11320105-11320124 MS.gene47936:CDS 45.0%
CGCAGTGTTTCCTTATTCGA+TGG + chr4.1:11320322-11320341 None:intergenic 45.0%
TAAGAGGAAGACGGTTGTGA+GGG + chr4.1:11319719-11319738 None:intergenic 45.0%
TAGCGGAAGTAAGAGGAAGA+CGG + chr4.1:11319728-11319747 None:intergenic 45.0%
TAGTAGTAGGGGGCAACAAA+CGG - chr4.1:11320609-11320628 MS.gene47936:CDS 45.0%
TATGGAATGCAAGTCACCAC+CGG + chr4.1:11319685-11319704 None:intergenic 45.0%
TCAGCTACAAAAAGCCGGTT+TGG + chr4.1:11320145-11320164 None:intergenic 45.0%
TTATTCGATGGAGCCGCAAA+CGG + chr4.1:11320310-11320329 None:intergenic 45.0%
TTTCTTGAGCCAGGAACTTC+AGG + chr4.1:11320544-11320563 None:intergenic 45.0%
! CATCTTCTTCGTTTCTGAGG+CGG + chr4.1:11319485-11319504 None:intergenic 45.0%
! TTGGAGTACCTTCACATGCT+AGG - chr4.1:11319875-11319894 MS.gene47936:CDS 45.0%
!! GTGGGTGTTGGAAAAGTAAG+AGG + chr4.1:11320361-11320380 None:intergenic 45.0%
!! TTATGCAGCGGAAGTATTGG+TGG - chr4.1:11319850-11319869 MS.gene47936:CDS 45.0%
!!! GTTTTTGGCTTTCTTGAGCC+AGG + chr4.1:11320553-11320572 None:intergenic 45.0%
AAGGATCCGACTCAACGACT+CGG - chr4.1:11320436-11320455 MS.gene47936:CDS 50.0%
AGTAAGCGAAATCGGAGGAG+CGG + chr4.1:11319356-11319375 None:intergenic 50.0%
CCGGTTCAGCTACAAAAAGC+CGG + chr4.1:11320150-11320169 None:intergenic 50.0%
GCCCGCTCTTGTTCATTTGT+TGG - chr4.1:11320175-11320194 MS.gene47936:CDS 50.0%
GTAAGAGGAAGACGGTTGTG+AGG + chr4.1:11319720-11319739 None:intergenic 50.0%
GTAGAGTTCAAGCGTGCTTG+AGG + chr4.1:11320386-11320405 None:intergenic 50.0%
GTCTTCCTCTTACTTCCGCT+AGG - chr4.1:11319727-11319746 MS.gene47936:CDS 50.0%
GTTTGCGGCTCCATCGAATA+AGG - chr4.1:11320309-11320328 MS.gene47936:CDS 50.0%
TTACGGTCGTACTCCGTTTG+CGG - chr4.1:11320294-11320313 MS.gene47936:CDS 50.0%
TTAGACCCGAGTCGTTGAGT+CGG + chr4.1:11320445-11320464 None:intergenic 50.0%
! AACGACTCGGGTCTAAACGT+GGG - chr4.1:11320449-11320468 MS.gene47936:CDS 50.0%
! CCGGCTTTTTGTAGCTGAAC+CGG - chr4.1:11320147-11320166 MS.gene47936:CDS 50.0%
! TACGCGCGGGATTTGATTTC+CGG - chr4.1:11320403-11320422 MS.gene47936:CDS 50.0%
!! AGCGGAAGTATTGGTGGCAT+TGG - chr4.1:11319856-11319875 MS.gene47936:CDS 50.0%
!! GATGGCGGAGTAAGCGAAAT+CGG + chr4.1:11319364-11319383 None:intergenic 50.0%
ACTCGGGTCTAAACGTGGGT+CGG - chr4.1:11320453-11320472 MS.gene47936:CDS 55.0%
AGAACGGGAACGAGTGTAGG+AGG + chr4.1:11320056-11320075 None:intergenic 55.0%
AGGATCCGACTCAACGACTC+GGG - chr4.1:11320437-11320456 MS.gene47936:CDS 55.0%
CCCAAACGACCACCAATCCA+CGG + chr4.1:11320254-11320273 None:intergenic 55.0%
CTTGAGCCAGGAACTTCAGG+CGG + chr4.1:11320541-11320560 None:intergenic 55.0%
GAACAAGAGCGGGCAGAAAC+CGG + chr4.1:11320169-11320188 None:intergenic 55.0%
GAACGGGAACGAGTGTAGGA+GGG + chr4.1:11320055-11320074 None:intergenic 55.0%
GGTTTGAGGGAGAGACTCTC+CGG + chr4.1:11319330-11319349 None:intergenic 55.0%
TTAACGCCGCCTGAAGTTCC+TGG - chr4.1:11320532-11320551 MS.gene47936:CDS 55.0%
TTTCACCTCCTCCGCCGTAT+CGG - chr4.1:11319429-11319448 MS.gene47936:CDS 55.0%
! ACGCGCGGGATTTGATTTCC+GGG - chr4.1:11320404-11320423 MS.gene47936:CDS 55.0%
! ATGTGAGAGCGGACTTGCGA+CGG + chr4.1:11319401-11319420 None:intergenic 55.0%
! CAACGACTCGGGTCTAAACG+TGG - chr4.1:11320448-11320467 MS.gene47936:CDS 55.0%
!! CCGTGGATTGGTGGTCGTTT+GGG - chr4.1:11320251-11320270 MS.gene47936:CDS 55.0%
!! CTATATCTCCGGCGCCGATA+CGG + chr4.1:11319446-11319465 None:intergenic 55.0%
!! GACGGTTGTGAGGGTGTTTG+TGG + chr4.1:11319710-11319729 None:intergenic 55.0%
!! GTGAGGGTGTTTGTGGCGTA+TGG + chr4.1:11319703-11319722 None:intergenic 55.0%
AGGGAGAGACTCTCCGGTGA+AGG + chr4.1:11319324-11319343 None:intergenic 60.0%
CACGCTTGAACTCTACGCGC+GGG - chr4.1:11320390-11320409 MS.gene47936:CDS 60.0%
CGACCTTCTTCCGCCTTCAC+CGG - chr4.1:11319308-11319327 MS.gene47936:CDS 60.0%
GAGAGACTCTCCGGTGAAGG+CGG + chr4.1:11319321-11319340 None:intergenic 60.0%
GAGTTTCCGGCGGCAACTTC+CGG + chr4.1:11320220-11320239 None:intergenic 60.0%
GCACGCTTGAACTCTACGCG+CGG - chr4.1:11320389-11320408 MS.gene47936:CDS 60.0%
GGACTTGCGACGGAAGGTAG+CGG + chr4.1:11319391-11319410 None:intergenic 60.0%
GGAGGAGCGGTGAGGTTTGA+GGG + chr4.1:11319343-11319362 None:intergenic 60.0%
GGCGGAGGAGGTGAAAGTCA+CGG + chr4.1:11319425-11319444 None:intergenic 60.0%
GGCGGAGTAAGCGAAATCGG+AGG + chr4.1:11319361-11319380 None:intergenic 60.0%
TCAAGCGTGCTTGAGGCCGT+GGG + chr4.1:11320379-11320398 None:intergenic 60.0%
TCTCCGGTGAAGGCGGAAGA+AGG + chr4.1:11319314-11319333 None:intergenic 60.0%
TTCAAGCGTGCTTGAGGCCG+TGG + chr4.1:11320380-11320399 None:intergenic 60.0%
! CGTATCGGCGCCGGAGATAT+AGG - chr4.1:11319444-11319463 MS.gene47936:CDS 60.0%
!! ACGGAAGGTAGCGGAACGGA+TGG + chr4.1:11319382-11319401 None:intergenic 60.0%
!! CTTCGTTTCTGAGGCGGCAG+AGG + chr4.1:11319479-11319498 None:intergenic 60.0%
!! GAAGGTAGCGGAACGGATGG+CGG + chr4.1:11319379-11319398 None:intergenic 60.0%
!! GCCGTGGATTGGTGGTCGTT+TGG - chr4.1:11320250-11320269 MS.gene47936:CDS 60.0%
!! TGCGACGGAAGGTAGCGGAA+CGG + chr4.1:11319386-11319405 None:intergenic 60.0%
AAACTCCCACGGCAACGCCG+TGG - chr4.1:11320234-11320253 MS.gene47936:CDS 65.0%
ACCAATCCACGGCGTTGCCG+TGG + chr4.1:11320243-11320262 None:intergenic 65.0%
CCAATCCACGGCGTTGCCGT+GGG + chr4.1:11320242-11320261 None:intergenic 65.0%
CGGAGGAGCGGTGAGGTTTG+AGG + chr4.1:11319344-11319363 None:intergenic 65.0%
GCGAAATCGGAGGAGCGGTG+AGG + chr4.1:11319351-11319370 None:intergenic 65.0%
GGCGTTGCCGTGGGAGTTTC+CGG + chr4.1:11320233-11320252 None:intergenic 65.0%
GTGCTTGAGGCCGTGGGTGT+TGG + chr4.1:11320373-11320392 None:intergenic 65.0%
GTTGCCGCCGGAAACTCCCA+CGG - chr4.1:11320223-11320242 MS.gene47936:CDS 65.0%
GTTGCCGTGGGAGTTTCCGG+CGG + chr4.1:11320230-11320249 None:intergenic 65.0%
! GAGAGCGGACTTGCGACGGA+AGG + chr4.1:11319397-11319416 None:intergenic 65.0%
!! ACGGCAACGCCGTGGATTGG+TGG - chr4.1:11320242-11320261 MS.gene47936:CDS 65.0%
!! TATCTCCGGCGCCGATACGG+CGG + chr4.1:11319443-11319462 None:intergenic 65.0%
CCCACGGCAACGCCGTGGAT+TGG - chr4.1:11320239-11320258 MS.gene47936:CDS 70.0%
GTCTCGCCGGAAGTTGCCGC+CGG - chr4.1:11320211-11320230 MS.gene47936:CDS 70.0%
! CTCCTCCGCCGTATCGGCGC+CGG - chr4.1:11319435-11319454 MS.gene47936:CDS 75.0%
!!! CGGCGCCGATACGGCGGAGG+AGG + chr4.1:11319437-11319456 None:intergenic 80.0%
!!! CTCCGGCGCCGATACGGCGG+AGG + chr4.1:11319440-11319459 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 11319192 11320654 11319192 ID=MS.gene47936
chr4.1 mRNA 11319192 11320654 11319192 ID=MS.gene47936.t1;Parent=MS.gene47936
chr4.1 exon 11320098 11320654 11320098 ID=MS.gene47936.t1.exon1;Parent=MS.gene47936.t1
chr4.1 CDS 11320098 11320654 11320098 ID=cds.MS.gene47936.t1;Parent=MS.gene47936.t1
chr4.1 exon 11319192 11319999 11319192 ID=MS.gene47936.t1.exon2;Parent=MS.gene47936.t1
chr4.1 CDS 11319192 11319999 11319192 ID=cds.MS.gene47936.t1;Parent=MS.gene47936.t1
Gene Sequence

>MS.gene47936

ATGTTAGAAACTGGTGCACGTGATTCTGAGTTGAGTTTAGAAACTGTGAATTCAACACAACGAAGCTCAATGAGCAGTGAAAGCATTTGCAGCACTAGTTTCAGCCGTCTTTCATTCGACCTTCTTCCGCCTTCACCGGAGAGTCTCTCCCTCAAACCTCACCGCTCCTCCGATTTCGCTTACTCCGCCATCCGTTCCGCTACCTTCCGTCGCAAGTCCGCTCTCACATTCCGTGACTTTCACCTCCTCCGCCGTATCGGCGCCGGAGATATAGGCACTGTTTACCTCTGCCGCCTCAGAAACGAAGAAGATGACACTTGTTTGTATGCGATGAAGGTTGTGGATAAAGAGGTTGTTGCATTGAAGAAGAAATCACATAGAGCTGAAATGGAGAGAAAGATTCTGAAAATGCTTGATCATCCTTTTCTTCCTACACTCTATGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAATTTTGTTCCGGTGGTGACTTGCATTCCATACGCCACAAACACCCTCACAACCGTCTTCCTCTTACTTCCGCTAGGTAAATCTCTCAAAACACAGTCTATTTTACGAATCTAAACTACAAGAACTGAATGTATAAGTTATATGCTCATGTTATTTTTGTATATTGTTACTCAGATTTTATGCAGCGGAAGTATTGGTGGCATTGGAGTACCTTCACATGCTAGGAATCATTTACAGAGATCTAAAGCCTGAGAATGTGTTAGTTCGATCAGACGGTCACATTATGCTTTCAGATTTCGATCTTTCACTTTGCTCAAATGCAATCCCAGCCGTTGAATCATCAGATAATTTACAAGATTCCACTTTTTCATCAACATTACCCTCCTACACTCGTTCCCGTTCTTTTCCTACACCATTCACTTGCTTTTCAAACCGGTTATTCAAGTCACGTAAGGTTCAAACCGTTCAACCAAACCGGCTTTTTGTAGCTGAACCGGTTTCTGCCCGCTCTTGTTCATTTGTTGGAACACATGAATATGTCTCGCCGGAAGTTGCCGCCGGAAACTCCCACGGCAACGCCGTGGATTGGTGGTCGTTTGGGATATTTATCTATGAACTTATTTACGGTCGTACTCCGTTTGCGGCTCCATCGAATAAGGAAACACTGCGTAACATCTTAAAAAAGCCTCTTACTTTTCCAACACCCACGGCCTCAAGCACGCTTGAACTCTACGCGCGGGATTTGATTTCCGGGTTACTTAATAAGGATCCGACTCAACGACTCGGGTCTAAACGTGGGTCGGCTGACGTCAAGAAGCATTCGTTTTTTAAAGGGATTAATTTGGCGCTGATTCGTATGTTAACGCCGCCTGAAGTTCCTGGCTCAAGAAAGCCAAAAACGATGTCGTTTTATCATGGGAAGGGTAGTAATAGCAATAGTAGTAGGGGGCAACAAACGGCGTCGTTTGATGTTTACTTTTGA
Protein sequence

>MS.gene47936.t1

MLETGARDSELSLETVNSTQRSSMSSESICSTSFSRLSFDLLPPSPESLSLKPHRSSDFAYSAIRSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRNEEDDTCLYAMKVVDKEVVALKKKSHRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSIRHKHPHNRLPLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESSDNLQDSTFSSTLPSYTRSRSFPTPFTCFSNRLFKSRKVQTVQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGRTPFAAPSNKETLRNILKKPLTFPTPTASSTLELYARDLISGLLNKDPTQRLGSKRGSADVKKHSFFKGINLALIRMLTPPEVPGSRKPKTMSFYHGKGSNSNSSRGQQTASFDVYF