Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035660.t1 | XP_003610217.1 | 96.9 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.00E+00 | 1607 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035660.t1 | Q9ZV48 | 66.5 | 790 | 252 | 6 | 24 | 803 | 49 | 835 | 0.0e+00 | 1095.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035660.t1 | G7JEA0 | 96.9 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.0e+00 | 1607.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035660 | MS.gene029463 | PPI |
| MS.gene035660 | MS.gene95324 | PPI |
| MS.gene62674 | MS.gene035660 | PPI |
| MS.gene035660 | MS.gene73417 | PPI |
| MS.gene038603 | MS.gene035660 | PPI |
| MS.gene83030 | MS.gene035660 | PPI |
| MS.gene035660 | MS.gene75183 | PPI |
| MS.gene035660 | MS.gene040931 | PPI |
| MS.gene035660 | MS.gene71778 | PPI |
| MS.gene035660 | MS.gene031592 | PPI |
| MS.gene009143 | MS.gene035660 | PPI |
| MS.gene035660 | MS.gene006702 | PPI |
| MS.gene035660 | MS.gene71003 | PPI |
| MS.gene045478 | MS.gene035660 | PPI |
| MS.gene035660 | MS.gene015639 | PPI |
| MS.gene035660 | MS.gene026499 | PPI |
| MS.gene95835 | MS.gene035660 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035660.t1 | MTR_4g129270 | 96.929 | 814 | 21 | 1 | 1 | 810 | 32 | 845 | 0.0 | 1640 |
| MS.gene035660.t1 | MTR_4g129270 | 96.814 | 722 | 19 | 1 | 1 | 718 | 32 | 753 | 0.0 | 1454 |
| MS.gene035660.t1 | MTR_8g063790 | 62.247 | 792 | 285 | 5 | 24 | 805 | 52 | 839 | 0.0 | 1040 |
| MS.gene035660.t1 | MTR_1g109620 | 60.526 | 798 | 301 | 7 | 17 | 806 | 53 | 844 | 0.0 | 1009 |
| MS.gene035660.t1 | MTR_8g105740 | 58.437 | 806 | 316 | 8 | 12 | 803 | 47 | 847 | 0.0 | 996 |
| MS.gene035660.t1 | MTR_1g032730 | 59.023 | 798 | 308 | 8 | 24 | 807 | 61 | 853 | 0.0 | 989 |
| MS.gene035660.t1 | MTR_4g080160 | 58.503 | 788 | 311 | 6 | 26 | 803 | 67 | 848 | 0.0 | 972 |
| MS.gene035660.t1 | MTR_3g078210 | 53.448 | 754 | 339 | 6 | 46 | 793 | 5 | 752 | 0.0 | 812 |
| MS.gene035660.t1 | MTR_3g467030 | 46.269 | 603 | 284 | 7 | 27 | 623 | 1 | 569 | 6.89e-173 | 511 |
| MS.gene035660.t1 | MTR_0034s0170 | 35.458 | 753 | 427 | 20 | 24 | 756 | 83 | 796 | 1.47e-136 | 428 |
| MS.gene035660.t1 | MTR_2g073260 | 33.641 | 758 | 435 | 20 | 24 | 757 | 122 | 835 | 2.00e-133 | 421 |
| MS.gene035660.t1 | MTR_8g087910 | 40.741 | 324 | 178 | 7 | 23 | 344 | 74 | 385 | 3.85e-71 | 239 |
| MS.gene035660.t1 | MTR_8g087930 | 29.953 | 424 | 249 | 13 | 350 | 757 | 10 | 401 | 2.75e-50 | 185 |
| MS.gene035660.t1 | MTR_3g076810 | 46.154 | 156 | 74 | 4 | 6 | 154 | 17 | 169 | 4.49e-35 | 131 |
| MS.gene035660.t1 | MTR_3g467040 | 45.133 | 113 | 61 | 1 | 448 | 559 | 110 | 222 | 1.38e-26 | 109 |
| MS.gene035660.t1 | MTR_3g467040 | 38.793 | 116 | 69 | 1 | 271 | 386 | 1 | 114 | 7.00e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035660.t1 | AT2G18700 | 66.456 | 790 | 252 | 6 | 24 | 803 | 49 | 835 | 0.0 | 1107 |
| MS.gene035660.t1 | AT1G23870 | 60.656 | 793 | 298 | 5 | 24 | 806 | 58 | 846 | 0.0 | 1032 |
| MS.gene035660.t1 | AT1G70290 | 60.483 | 787 | 294 | 7 | 24 | 800 | 56 | 835 | 0.0 | 997 |
| MS.gene035660.t1 | AT4G17770 | 59.518 | 788 | 306 | 5 | 26 | 804 | 61 | 844 | 0.0 | 995 |
| MS.gene035660.t1 | AT4G17770 | 59.518 | 788 | 306 | 5 | 26 | 804 | 61 | 844 | 0.0 | 995 |
| MS.gene035660.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 988 |
| MS.gene035660.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 988 |
| MS.gene035660.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 988 |
| MS.gene035660.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 988 |
| MS.gene035660.t1 | AT1G60140 | 58.052 | 801 | 317 | 6 | 14 | 804 | 53 | 844 | 0.0 | 988 |
| MS.gene035660.t1 | AT1G06410 | 57.789 | 796 | 315 | 8 | 26 | 810 | 60 | 845 | 0.0 | 971 |
| MS.gene035660.t1 | AT1G06410 | 57.789 | 796 | 315 | 8 | 26 | 810 | 60 | 845 | 0.0 | 971 |
| MS.gene035660.t1 | AT1G06410 | 57.789 | 796 | 315 | 8 | 26 | 810 | 60 | 845 | 0.0 | 971 |
| MS.gene035660.t1 | AT1G68020 | 57.160 | 810 | 316 | 8 | 21 | 803 | 49 | 854 | 0.0 | 966 |
| MS.gene035660.t1 | AT1G68020 | 57.160 | 810 | 316 | 8 | 21 | 803 | 49 | 854 | 0.0 | 966 |
| MS.gene035660.t1 | AT1G70290 | 55.909 | 787 | 292 | 8 | 24 | 800 | 56 | 797 | 0.0 | 898 |
| MS.gene035660.t1 | AT1G60140 | 59.353 | 711 | 274 | 5 | 14 | 718 | 53 | 754 | 0.0 | 897 |
| MS.gene035660.t1 | AT1G68020 | 57.480 | 635 | 243 | 7 | 21 | 632 | 49 | 679 | 0.0 | 767 |
| MS.gene035660.t1 | AT1G16980 | 33.087 | 813 | 473 | 22 | 24 | 808 | 11 | 780 | 4.93e-135 | 421 |
| MS.gene035660.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 5.33e-135 | 424 |
| MS.gene035660.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 5.33e-135 | 424 |
| MS.gene035660.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 5.33e-135 | 424 |
| MS.gene035660.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 5.33e-135 | 424 |
| MS.gene035660.t1 | AT4G27550 | 31.790 | 821 | 472 | 20 | 24 | 799 | 3 | 780 | 5.82e-127 | 399 |
| MS.gene035660.t1 | AT4G27550 | 31.630 | 822 | 481 | 20 | 24 | 799 | 3 | 789 | 3.87e-126 | 397 |
| MS.gene035660.t1 | AT1G16980 | 34.169 | 638 | 363 | 17 | 22 | 645 | 9 | 603 | 2.54e-111 | 354 |
Find 162 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGGAAGGTTCTGATTT+TGG | 0.120895 | 8.1:+3588438 | MS.gene035660:CDS |
| CAAGAAGCAGATCCTGATTT+TGG | 0.199178 | 8.1:+3589716 | MS.gene035660:CDS |
| ATGATCCTGTAGTAGTTAAA+AGG | 0.228717 | 8.1:+3589789 | MS.gene035660:CDS |
| ATTCTTCGTTTACGAGAAAT+TGG | 0.240051 | 8.1:-3587614 | None:intergenic |
| ATATTTGTCATTAACTTCTT+TGG | 0.249338 | 8.1:-3588635 | None:intergenic |
| AATATTGTCGTTGAAACTTC+TGG | 0.252033 | 8.1:-3587568 | None:intergenic |
| TGGAGGGGAATGAGAAATTA+AGG | 0.263134 | 8.1:+3588524 | MS.gene035660:CDS |
| CAAGTGTTTGCATGCACTAT+TGG | 0.286479 | 8.1:+3590335 | MS.gene035660:CDS |
| TTTGGCATTGAGGAATCTTT+TGG | 0.299694 | 8.1:+3588504 | MS.gene035660:CDS |
| TTCACTCAGCGGGGCGGTTC+GGG | 0.301816 | 8.1:+3588909 | MS.gene035660:CDS |
| CTTCACTCAGCGGGGCGGTT+CGG | 0.306761 | 8.1:+3588908 | MS.gene035660:CDS |
| CTCTCATGACGTAGCGTATT+GGG | 0.309302 | 8.1:+3589038 | MS.gene035660:CDS |
| TGCGTTTCAATTCTTCTCAT+TGG | 0.309786 | 8.1:+3587954 | MS.gene035660:CDS |
| TTGGATTTGTTCAAAGGTAT+TGG | 0.319105 | 8.1:+3588472 | MS.gene035660:CDS |
| AAGTAGGGCTAAATACTATT+TGG | 0.326557 | 8.1:+3590367 | MS.gene035660:CDS |
| GTTTCTGTAAGCATTATCTT+TGG | 0.328259 | 8.1:+3587888 | MS.gene035660:CDS |
| AATTAACAAAGCTCCTAGTT+TGG | 0.333947 | 8.1:+3589269 | MS.gene035660:CDS |
| GGTTCATGATTATCATCTAA+TGG | 0.341092 | 8.1:+3588054 | MS.gene035660:CDS |
| AAAGAAGTTAATGACAAATA+TGG | 0.343946 | 8.1:+3588637 | MS.gene035660:CDS |
| TGGATTTGTTCAAAGGTATT+GGG | 0.345683 | 8.1:+3588473 | MS.gene035660:CDS |
| AGGCCAATTGTTTGTATAAA+CGG | 0.358705 | 8.1:+3588679 | MS.gene035660:CDS |
| AATACAGTGTTCATTGTTAG+TGG | 0.360290 | 8.1:+3589333 | MS.gene035660:CDS |
| TTTAACTACTACAGGATCAT+TGG | 0.373736 | 8.1:-3589786 | None:intergenic |
| ACTCACAATGATTTCTATCA+TGG | 0.377950 | 8.1:+3587866 | MS.gene035660:CDS |
| ATCATTGTTTCTGAGTTCAT+TGG | 0.382781 | 8.1:+3588877 | MS.gene035660:CDS |
| TAGACAAGGAAGTGTTGAAT+TGG | 0.390593 | 8.1:+3588810 | MS.gene035660:CDS |
| AAATACTATTTGGATGATAC+TGG | 0.392235 | 8.1:+3590377 | MS.gene035660:CDS |
| GCTTGCCACAGTCCAAAATC+AGG | 0.397022 | 8.1:-3589728 | None:intergenic |
| ATCCTGATGAAGATTATGTT+TGG | 0.404447 | 8.1:+3588032 | MS.gene035660:CDS |
| CAAAACCTCGCGAACCTTGT+CGG | 0.407094 | 8.1:-3588008 | None:intergenic |
| CCTAGACATAGAAGAAAATC+TGG | 0.408487 | 8.1:-3590248 | None:intergenic |
| GCAACTTCTTCTTGTTGTGA+TGG | 0.411196 | 8.1:-3587791 | None:intergenic |
| CTCAAGATATATGTGGGATT+AGG | 0.419772 | 8.1:+3589108 | MS.gene035660:CDS |
| CTAAGTATTTCTTCACGAAC+AGG | 0.420112 | 8.1:-3588172 | None:intergenic |
| TTGTAGCAGGATGTTGGGTT+TGG | 0.421912 | 8.1:+3588261 | MS.gene035660:CDS |
| CAGTGTTCATTGTTAGTGGC+AGG | 0.422219 | 8.1:+3589337 | MS.gene035660:CDS |
| CTTGTCGGCAAAGATTCTAT+TGG | 0.423981 | 8.1:-3587993 | None:intergenic |
| GACTGATGGCAGGTGGAGTA+AGG | 0.425232 | 8.1:+3589556 | MS.gene035660:intron |
| GGACCGTTTATACAAACAAT+TGG | 0.426572 | 8.1:-3588682 | None:intergenic |
| TGCCAATCCGAGAGTCGTCC+AGG | 0.433203 | 8.1:-3589585 | None:intergenic |
| GCCTTCTCCTGAGTCGAAAC+CGG | 0.435832 | 8.1:-3588703 | None:intergenic |
| TGATGGCACCATGATGCCTC+AGG | 0.435835 | 8.1:+3589242 | MS.gene035660:CDS |
| AAATAGTATTTAGCCCTACT+TGG | 0.436019 | 8.1:-3590365 | None:intergenic |
| GTCTTGTTGTAGCAGGATGT+TGG | 0.445329 | 8.1:+3588255 | MS.gene035660:CDS |
| GCTCTCATGACGTAGCGTAT+TGG | 0.446089 | 8.1:+3589037 | MS.gene035660:CDS |
| TTGTTGAACTGTGATTTGAT+TGG | 0.446772 | 8.1:+3588199 | MS.gene035660:CDS |
| TGATCCTGTAGTAGTTAAAA+GGG | 0.447623 | 8.1:+3589790 | MS.gene035660:CDS |
| AAACGGTCCGGTTTCGACTC+AGG | 0.449305 | 8.1:+3588696 | MS.gene035660:CDS |
| GTTGTTCGCCTTCACTCAGC+GGG | 0.449644 | 8.1:+3588899 | MS.gene035660:CDS |
| CCACATGGGTCTTCTCGAAT+CGG | 0.450549 | 8.1:+3588363 | MS.gene035660:CDS |
| TACATTGGTGTTGATTACTT+TGG | 0.450702 | 8.1:+3588304 | MS.gene035660:CDS |
| TTGGAAAATTAATGTAGAAA+AGG | 0.451444 | 8.1:+3589619 | MS.gene035660:CDS |
| AGGATTTAGAGAGAGCTTGT+AGG | 0.454660 | 8.1:+3589076 | MS.gene035660:CDS |
| TCTTGTTGTAGCAGGATGTT+GGG | 0.455109 | 8.1:+3588256 | MS.gene035660:CDS |
| CTGTTCGTGAAGAAATACTT+AGG | 0.456072 | 8.1:+3588173 | MS.gene035660:CDS |
| GTGATGAACAATCTGGGTAT+AGG | 0.457022 | 8.1:+3588659 | MS.gene035660:CDS |
| GATGACTTGGATTTGTTCAA+AGG | 0.461719 | 8.1:+3588466 | MS.gene035660:CDS |
| GTTCTGTAGATTTCTGAAGT+AGG | 0.470644 | 8.1:-3588145 | None:intergenic |
| GGATTTAGAGAGAGCTTGTA+GGG | 0.471625 | 8.1:+3589077 | MS.gene035660:CDS |
| GAAGAAAGAATTTGAAGGGA+AGG | 0.471883 | 8.1:+3588426 | MS.gene035660:CDS |
| AAATATGGTGATGAACAATC+TGG | 0.477180 | 8.1:+3588652 | MS.gene035660:CDS |
| TTACGAGAAATTGGTGATGA+AGG | 0.479580 | 8.1:-3587605 | None:intergenic |
| TCCTGATGAAGATTATGTTT+GGG | 0.480347 | 8.1:+3588033 | MS.gene035660:CDS |
| CGTTGGTTCGTTAAAATCAC+AGG | 0.480855 | 8.1:+3587757 | MS.gene035660:CDS |
| CCCCACAGGAAGAATCTTGA+TGG | 0.481795 | 8.1:-3588338 | None:intergenic |
| TTGTGACTTGAAATTCGAAT+GGG | 0.482906 | 8.1:+3587673 | MS.gene035660:CDS |
| TTGGATTATGAGTCTAAAAG+AGG | 0.484605 | 8.1:+3588280 | MS.gene035660:CDS |
| CTTGTGACTTGAAATTCGAA+TGG | 0.485275 | 8.1:+3587672 | MS.gene035660:CDS |
| ACCCAAACATAATCTTCATC+AGG | 0.489582 | 8.1:-3588034 | None:intergenic |
| TGTTCACCTTGAGAGTATGC+TGG | 0.489913 | 8.1:+3589763 | MS.gene035660:CDS |
| GAACTCTGCAATCAAAATGA+AGG | 0.490743 | 8.1:+3588969 | MS.gene035660:CDS |
| AATTGTTTGTATAAACGGTC+CGG | 0.492336 | 8.1:+3588684 | MS.gene035660:CDS |
| TGGTCATGTTATCAGACTGC+TGG | 0.493365 | 8.1:+3590397 | MS.gene035660:CDS |
| TGACTTCTCCTCATTCCTCA+TGG | 0.494550 | 8.1:-3590225 | None:intergenic |
| ATTAAGGGGTGAAGTTGTGT+TGG | 0.495890 | 8.1:+3588540 | MS.gene035660:CDS |
| CGTCCTCTGAAACAGCTAAG+AGG | 0.495992 | 8.1:+3588392 | MS.gene035660:CDS |
| AGTTGAAGAAAGAATTTGAA+GGG | 0.498193 | 8.1:+3588422 | MS.gene035660:CDS |
| GTGTTCATTGTTAGTGGCAG+GGG | 0.498938 | 8.1:+3589339 | MS.gene035660:CDS |
| AAACGTTTCCTCAAGTAAGT+TGG | 0.499254 | 8.1:-3588082 | None:intergenic |
| TGGTGCCATCATAGTCCAAA+AGG | 0.499691 | 8.1:-3589230 | None:intergenic |
| TGTTCGTGAAGAAATACTTA+GGG | 0.500357 | 8.1:+3588174 | MS.gene035660:CDS |
| GTAGAGTTTGCCTTAGCGAC+TGG | 0.503290 | 8.1:+3589361 | MS.gene035660:CDS |
| GGAGGGGAATGAGAAATTAA+GGG | 0.505727 | 8.1:+3588525 | MS.gene035660:CDS |
| AAGTCACAAGAAGCGCGTAT+TGG | 0.516480 | 8.1:-3587659 | None:intergenic |
| CACTTGTGATGTGGTTGGTA+AGG | 0.520338 | 8.1:-3590318 | None:intergenic |
| TCCCTGGACGACTCTCGGAT+TGG | 0.522159 | 8.1:+3589583 | MS.gene035660:CDS |
| GTTGAATTGGACAAAGCCCT+TGG | 0.526550 | 8.1:+3588823 | MS.gene035660:CDS |
| GGGCGGTTCGGGTGAATCCG+TGG | 0.535674 | 8.1:+3588920 | MS.gene035660:CDS |
| TCTTCCTGTGGGGATCCACA+TGG | 0.539623 | 8.1:+3588348 | MS.gene035660:CDS |
| GATTCTCCCTGGACGACTCT+CGG | 0.545192 | 8.1:+3589578 | MS.gene035660:CDS |
| TTGTGAATGCTGTGAGGGAT+GGG | 0.545495 | 8.1:+3588755 | MS.gene035660:CDS |
| ACCATCAAGATTCTTCCTGT+GGG | 0.546402 | 8.1:+3588337 | MS.gene035660:CDS |
| GAGTAGCGGAAAAGATATCC+AGG | 0.550385 | 8.1:+3588585 | MS.gene035660:CDS |
| ATGAAGAAAACCAGTCGCTA+AGG | 0.551572 | 8.1:-3589371 | None:intergenic |
| GCATTATCTCAAGATATATG+TGG | 0.551844 | 8.1:+3589101 | MS.gene035660:CDS |
| CAATAGAATCTTTGCCGACA+AGG | 0.552855 | 8.1:+3587994 | MS.gene035660:CDS |
| TACCATCAAGATTCTTCCTG+TGG | 0.554669 | 8.1:+3588336 | MS.gene035660:CDS |
| TCCGGTTTCGACTCAGGAGA+AGG | 0.554779 | 8.1:+3588702 | MS.gene035660:CDS |
| CTTCCTGTGGGGATCCACAT+GGG | 0.555318 | 8.1:+3588349 | MS.gene035660:CDS |
| CACCCTCTTAGCTGTTTCAG+AGG | 0.556372 | 8.1:-3588395 | None:intergenic |
| CAATCTCAAACTTCACATCC+TGG | 0.558555 | 8.1:-3588603 | None:intergenic |
| CTATTGGTTATAAACCAAGT+AGG | 0.558755 | 8.1:+3590351 | MS.gene035660:CDS |
| TATTGTTGAAGTAAAACCTC+AGG | 0.563515 | 8.1:+3589820 | MS.gene035660:CDS |
| GAGTTGAAGAAAGAATTTGA+AGG | 0.566060 | 8.1:+3588421 | MS.gene035660:CDS |
| CGGAACATGGTTACTTCACA+AGG | 0.566380 | 8.1:+3589415 | MS.gene035660:CDS |
| TGATGAAGGAAGTGAAAGGT+TGG | 0.568415 | 8.1:-3587591 | None:intergenic |
| CTACAAACAGTATACTCGTA+AGG | 0.570286 | 8.1:-3588790 | None:intergenic |
| TCATTGGCTTGCATACAAGA+AGG | 0.571083 | 8.1:+3587970 | MS.gene035660:CDS |
| AGTGTTCATTGTTAGTGGCA+GGG | 0.574176 | 8.1:+3589338 | MS.gene035660:CDS |
| TTGGGTCTCTCTGCGGAACA+TGG | 0.575133 | 8.1:+3589402 | MS.gene035660:CDS |
| ATTGTGAATGCTGTGAGGGA+TGG | 0.578772 | 8.1:+3588754 | MS.gene035660:CDS |
| TATATCAACCATGAGGAATG+AGG | 0.581492 | 8.1:+3590217 | MS.gene035660:CDS |
| TATTGGTTATAAACCAAGTA+GGG | 0.583751 | 8.1:+3590352 | MS.gene035660:CDS |
| AGACCCATGTGGATCCCCAC+AGG | 0.588284 | 8.1:-3588352 | None:intergenic |
| CGAACCGCCCCGCTGAGTGA+AGG | 0.592523 | 8.1:-3588907 | None:intergenic |
| AGACAAAGCTTCTTAAAACT+AGG | 0.593436 | 8.1:-3589162 | None:intergenic |
| AGAGAGATAACATCCAAACT+AGG | 0.593873 | 8.1:-3589282 | None:intergenic |
| AATATGGTGATGAACAATCT+GGG | 0.594049 | 8.1:+3588653 | MS.gene035660:CDS |
| GTCCTCTGAAACAGCTAAGA+GGG | 0.596114 | 8.1:+3588393 | MS.gene035660:CDS |
| AAATCATTGTGAGTTTCAGA+AGG | 0.598636 | 8.1:-3587857 | None:intergenic |
| AATTGATCCCTGAGGCATCA+TGG | 0.598853 | 8.1:-3589250 | None:intergenic |
| CTTTGCCGACAAGGTTCGCG+AGG | 0.599029 | 8.1:+3588003 | MS.gene035660:CDS |
| AATTAATGTAGAAAAGGTGA+TGG | 0.600049 | 8.1:+3589625 | MS.gene035660:CDS |
| CATTATCTCAAGATATATGT+GGG | 0.605992 | 8.1:+3589102 | MS.gene035660:CDS |
| TTCAGATTCTGAATCAAGCA+AGG | 0.606163 | 8.1:+3588563 | MS.gene035660:CDS |
| TGTGAGCAAAGGTAAAGTGG+TGG | 0.606477 | 8.1:+3590187 | MS.gene035660:CDS |
| GAGTCTAAAAGAGGTTACAT+TGG | 0.608056 | 8.1:+3588289 | MS.gene035660:CDS |
| GGTGGAGTAAGGATTCTCCC+TGG | 0.609902 | 8.1:+3589567 | MS.gene035660:intron |
| TGTCGTTGAAACTTCTGGAA+CGG | 0.610383 | 8.1:-3587563 | None:intergenic |
| CTACCTCTGTCAAAGAGTCA+AGG | 0.612948 | 8.1:+3587929 | MS.gene035660:CDS |
| ACACCTTGACTCTTTGACAG+AGG | 0.613904 | 8.1:-3587932 | None:intergenic |
| CATTGGCCAGCATACTCTCA+AGG | 0.616590 | 8.1:-3589769 | None:intergenic |
| ATTGGACAAAGCCCTTGGAG+TGG | 0.616712 | 8.1:+3588828 | MS.gene035660:CDS |
| CTTTACACAGAAGCAACTGA+TGG | 0.620660 | 8.1:+3589650 | MS.gene035660:CDS |
| GGGTGTGAGCAAAGGTAAAG+TGG | 0.624595 | 8.1:+3590184 | MS.gene035660:intron |
| CTGAATCAAGCAAGGAGTAG+CGG | 0.626177 | 8.1:+3588571 | MS.gene035660:CDS |
| GTTCGTGAAGAAATACTTAG+GGG | 0.627972 | 8.1:+3588175 | MS.gene035660:CDS |
| GGTAGCATGTAGTGAAACAA+AGG | 0.628237 | 8.1:-3587911 | None:intergenic |
| TTCGCCTTCACTCAGCGGGG+CGG | 0.628380 | 8.1:+3588903 | MS.gene035660:CDS |
| GATGGCACCATGATGCCTCA+GGG | 0.629851 | 8.1:+3589243 | MS.gene035660:CDS |
| GCCAATCCGAGAGTCGTCCA+GGG | 0.630314 | 8.1:-3589584 | None:intergenic |
| GAGTATACTGTTTGTAGACA+AGG | 0.631640 | 8.1:+3588796 | MS.gene035660:CDS |
| GGTTGTTCGCCTTCACTCAG+CGG | 0.632472 | 8.1:+3588898 | MS.gene035660:CDS |
| TTGCATTGTGAATGCTGTGA+GGG | 0.638559 | 8.1:+3588750 | MS.gene035660:CDS |
| GAAACATCGTCAATGTTCCA+CGG | 0.640645 | 8.1:-3588937 | None:intergenic |
| CCTTGGAGTGGAAAATGATG+AGG | 0.642829 | 8.1:+3588840 | MS.gene035660:CDS |
| CATGTTATCAGACTGCTGGA+AGG | 0.643775 | 8.1:+3590401 | MS.gene035660:CDS |
| GAGGGGAATGAGAAATTAAG+GGG | 0.646856 | 8.1:+3588526 | MS.gene035660:CDS |
| TTTGGTATCTCTGTAAGCAG+GGG | 0.647241 | 8.1:-3589196 | None:intergenic |
| AGGATTCCGAAAAGCAATTG+CGG | 0.647354 | 8.1:+3588989 | MS.gene035660:CDS |
| CCATCAAGATTCTTCCTGTG+GGG | 0.659257 | 8.1:+3588338 | MS.gene035660:CDS |
| GCAAACACTTGTGATGTGGT+TGG | 0.661634 | 8.1:-3590323 | None:intergenic |
| GATCCTGTAGTAGTTAAAAG+GGG | 0.670223 | 8.1:+3589791 | MS.gene035660:CDS |
| TGACAAATTGGGTCTCTCTG+CGG | 0.676406 | 8.1:+3589395 | MS.gene035660:CDS |
| GAAATGCAGGGTGTGAGCAA+AGG | 0.693831 | 8.1:+3590176 | MS.gene035660:intron |
| GCATGCAAACACTTGTGATG+TGG | 0.707983 | 8.1:-3590327 | None:intergenic |
| TTGGTGATGAAGGAAGTGAA+AGG | 0.728881 | 8.1:-3587595 | None:intergenic |
| GTTGCATTGTGAATGCTGTG+AGG | 0.729569 | 8.1:+3588749 | MS.gene035660:CDS |
| AAGAGCTTATATCAACCATG+AGG | 0.738943 | 8.1:+3590210 | MS.gene035660:CDS |
| GCTTTGTTAATTGATCCCTG+AGG | 0.743258 | 8.1:-3589258 | None:intergenic |
| CCGATTCGAGAAGACCCATG+TGG | 0.743893 | 8.1:-3588363 | None:intergenic |
| TTGTTCGCCTTCACTCAGCG+GGG | 0.757164 | 8.1:+3588900 | MS.gene035660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTTTAATTTTCATACA+CGG | - | chr8.1:3590127-3590146 | None:intergenic | 15.0% |
| !!! | TTAAACTTTTTCTTTTGTAA+TGG | + | chr8.1:3590137-3590156 | MS.gene035660:intron | 15.0% |
| !! | AAAGAAGTTAATGACAAATA+TGG | + | chr8.1:3588637-3588656 | MS.gene035660:CDS | 20.0% |
| !! | ATATTTGTCATTAACTTCTT+TGG | - | chr8.1:3588638-3588657 | None:intergenic | 20.0% |
| !! | CGAATAATTAATCTTTCATT+TGG | - | chr8.1:3589908-3589927 | None:intergenic | 20.0% |
| !! | TTGGAAAATTAATGTAGAAA+AGG | + | chr8.1:3589619-3589638 | MS.gene035660:CDS | 20.0% |
| !!! | AAACTTTTCTAACAAAACTT+TGG | - | chr8.1:3587816-3587835 | None:intergenic | 20.0% |
| !!! | TAATTTTAGAATCATTGCTT+TGG | + | chr8.1:3589137-3589156 | MS.gene035660:CDS | 20.0% |
| !!! | TATTCGTTTTATGATTTCAT+TGG | + | chr8.1:3589922-3589941 | MS.gene035660:intron | 20.0% |
| !!! | TTACTTGTTGATTCATTTTA+TGG | + | chr8.1:3589523-3589542 | MS.gene035660:intron | 20.0% |
| ! | AAAAAACCCAATTTCACTTT+AGG | - | chr8.1:3588109-3588128 | None:intergenic | 25.0% |
| ! | AAATACTATTTGGATGATAC+TGG | + | chr8.1:3590377-3590396 | MS.gene035660:CDS | 25.0% |
| ! | AATTAATGTAGAAAAGGTGA+TGG | + | chr8.1:3589625-3589644 | MS.gene035660:CDS | 25.0% |
| ! | AGTTGAAGAAAGAATTTGAA+GGG | + | chr8.1:3588422-3588441 | MS.gene035660:CDS | 25.0% |
| ! | CATTATCTCAAGATATATGT+GGG | + | chr8.1:3589102-3589121 | MS.gene035660:CDS | 25.0% |
| ! | GTCAATTAGAATTAGAATGA+AGG | + | chr8.1:3589944-3589963 | MS.gene035660:intron | 25.0% |
| ! | TTGTTTATTTATGATACCTG+AGG | - | chr8.1:3589839-3589858 | None:intergenic | 25.0% |
| !! | AACAATGAACACTGTATTTT+TGG | - | chr8.1:3589331-3589350 | None:intergenic | 25.0% |
| !! | ACAATGAACACTGTATTTTT+GGG | - | chr8.1:3589330-3589349 | None:intergenic | 25.0% |
| !! | ACTATCTTTTTCTTCAATGA+AGG | - | chr8.1:3589678-3589697 | None:intergenic | 25.0% |
| !! | ATATATTTTCAGCTCAAAGA+CGG | + | chr8.1:3587707-3587726 | MS.gene035660:CDS | 25.0% |
| !! | TATTGGTTATAAACCAAGTA+GGG | + | chr8.1:3590352-3590371 | MS.gene035660:CDS | 25.0% |
| !! | TTTTCTTCATGTGACAAATT+GGG | + | chr8.1:3589384-3589403 | MS.gene035660:CDS | 25.0% |
| !!! | TTGTATTTTTGTGAAATGCA+GGG | + | chr8.1:3590164-3590183 | MS.gene035660:intron | 25.0% |
| AAAAAGATAGTGCAATGGTT+TGG | + | chr8.1:3589687-3589706 | MS.gene035660:CDS | 30.0% | |
| AAATAGTATTTAGCCCTACT+TGG | - | chr8.1:3590368-3590387 | None:intergenic | 30.0% | |
| AAATCATTGTGAGTTTCAGA+AGG | - | chr8.1:3587860-3587879 | None:intergenic | 30.0% | |
| AAGTAGGGCTAAATACTATT+TGG | + | chr8.1:3590367-3590386 | MS.gene035660:CDS | 30.0% | |
| AATACAGTGTTCATTGTTAG+TGG | + | chr8.1:3589333-3589352 | MS.gene035660:CDS | 30.0% | |
| AATATTGTCGTTGAAACTTC+TGG | - | chr8.1:3587571-3587590 | None:intergenic | 30.0% | |
| AATTAACAAAGCTCCTAGTT+TGG | + | chr8.1:3589269-3589288 | MS.gene035660:CDS | 30.0% | |
| AATTGTTTGTATAAACGGTC+CGG | + | chr8.1:3588684-3588703 | MS.gene035660:CDS | 30.0% | |
| ACTCACAATGATTTCTATCA+TGG | + | chr8.1:3587866-3587885 | MS.gene035660:CDS | 30.0% | |
| AGACAAAGCTTCTTAAAACT+AGG | - | chr8.1:3589165-3589184 | None:intergenic | 30.0% | |
| AGGCCAATTGTTTGTATAAA+CGG | + | chr8.1:3588679-3588698 | MS.gene035660:CDS | 30.0% | |
| ATCCTGATGAAGATTATGTT+TGG | + | chr8.1:3588032-3588051 | MS.gene035660:CDS | 30.0% | |
| ATGATCCTGTAGTAGTTAAA+AGG | + | chr8.1:3589789-3589808 | MS.gene035660:CDS | 30.0% | |
| ATTCTTCGTTTACGAGAAAT+TGG | - | chr8.1:3587617-3587636 | None:intergenic | 30.0% | |
| GAGTTGAAGAAAGAATTTGA+AGG | + | chr8.1:3588421-3588440 | MS.gene035660:CDS | 30.0% | |
| GCATTATCTCAAGATATATG+TGG | + | chr8.1:3589101-3589120 | MS.gene035660:CDS | 30.0% | |
| GGTTCATGATTATCATCTAA+TGG | + | chr8.1:3588054-3588073 | MS.gene035660:CDS | 30.0% | |
| GTTTCAGAAGGTAAAAAAGT+TGG | - | chr8.1:3587848-3587867 | None:intergenic | 30.0% | |
| GTTTCTGTAAGCATTATCTT+TGG | + | chr8.1:3587888-3587907 | MS.gene035660:CDS | 30.0% | |
| TATTGTTGAAGTAAAACCTC+AGG | + | chr8.1:3589820-3589839 | MS.gene035660:CDS | 30.0% | |
| TCCTGATGAAGATTATGTTT+GGG | + | chr8.1:3588033-3588052 | MS.gene035660:CDS | 30.0% | |
| TCCTTGAAAAAACTCAAGAA+AGG | - | chr8.1:3590003-3590022 | None:intergenic | 30.0% | |
| TGAAGAAAAAGATAGTGCAA+TGG | + | chr8.1:3589682-3589701 | MS.gene035660:CDS | 30.0% | |
| TGATCCTGTAGTAGTTAAAA+GGG | + | chr8.1:3589790-3589809 | MS.gene035660:CDS | 30.0% | |
| TGTTCGTGAAGAAATACTTA+GGG | + | chr8.1:3588174-3588193 | MS.gene035660:CDS | 30.0% | |
| TTGGATTATGAGTCTAAAAG+AGG | + | chr8.1:3588280-3588299 | MS.gene035660:CDS | 30.0% | |
| TTGTGACTTGAAATTCGAAT+GGG | + | chr8.1:3587673-3587692 | MS.gene035660:CDS | 30.0% | |
| TTGTTGAACTGTGATTTGAT+TGG | + | chr8.1:3588199-3588218 | MS.gene035660:CDS | 30.0% | |
| TTTAACTACTACAGGATCAT+TGG | - | chr8.1:3589789-3589808 | None:intergenic | 30.0% | |
| ! | AAATATGGTGATGAACAATC+TGG | + | chr8.1:3588652-3588671 | MS.gene035660:CDS | 30.0% |
| ! | AATATGGTGATGAACAATCT+GGG | + | chr8.1:3588653-3588672 | MS.gene035660:CDS | 30.0% |
| ! | ACGTTTTCCTAAAGTGAAAT+TGG | + | chr8.1:3588099-3588118 | MS.gene035660:CDS | 30.0% |
| ! | CGTTTTCCTAAAGTGAAATT+GGG | + | chr8.1:3588100-3588119 | MS.gene035660:CDS | 30.0% |
| ! | CTATTGGTTATAAACCAAGT+AGG | + | chr8.1:3590351-3590370 | MS.gene035660:CDS | 30.0% |
| ! | GTTTTCTTCATGTGACAAAT+TGG | + | chr8.1:3589383-3589402 | MS.gene035660:CDS | 30.0% |
| ! | TTGGATTTGTTCAAAGGTAT+TGG | + | chr8.1:3588472-3588491 | MS.gene035660:CDS | 30.0% |
| !! | ATCATTGTTTCTGAGTTCAT+TGG | + | chr8.1:3588877-3588896 | MS.gene035660:CDS | 30.0% |
| !! | CTTGTATTTTTGTGAAATGC+AGG | + | chr8.1:3590163-3590182 | MS.gene035660:intron | 30.0% |
| !! | TACATTGGTGTTGATTACTT+TGG | + | chr8.1:3588304-3588323 | MS.gene035660:CDS | 30.0% |
| !! | TGGATTTGTTCAAAGGTATT+GGG | + | chr8.1:3588473-3588492 | MS.gene035660:CDS | 30.0% |
| !!! | ATTTTTTGTCTTGTTGTAGC+AGG | + | chr8.1:3588248-3588267 | MS.gene035660:CDS | 30.0% |
| !!! | GATTCTGAAATCTTTTACGT+TGG | + | chr8.1:3587740-3587759 | MS.gene035660:CDS | 30.0% |
| !!! | TCCTTTCTTGAGTTTTTTCA+AGG | + | chr8.1:3589999-3590018 | MS.gene035660:intron | 30.0% |
| AAACGTTTCCTCAAGTAAGT+TGG | - | chr8.1:3588085-3588104 | None:intergenic | 35.0% | |
| AAGAGCTTATATCAACCATG+AGG | + | chr8.1:3590210-3590229 | MS.gene035660:CDS | 35.0% | |
| ACCCAAACATAATCTTCATC+AGG | - | chr8.1:3588037-3588056 | None:intergenic | 35.0% | |
| AGAGAGATAACATCCAAACT+AGG | - | chr8.1:3589285-3589304 | None:intergenic | 35.0% | |
| CCTAGACATAGAAGAAAATC+TGG | - | chr8.1:3590251-3590270 | None:intergenic | 35.0% | |
| CTAAGTATTTCTTCACGAAC+AGG | - | chr8.1:3588175-3588194 | None:intergenic | 35.0% | |
| CTACAAACAGTATACTCGTA+AGG | - | chr8.1:3588793-3588812 | None:intergenic | 35.0% | |
| CTCAAGATATATGTGGGATT+AGG | + | chr8.1:3589108-3589127 | MS.gene035660:CDS | 35.0% | |
| CTGTTCGTGAAGAAATACTT+AGG | + | chr8.1:3588173-3588192 | MS.gene035660:CDS | 35.0% | |
| CTTACAGAGATACCAAAAAC+AGG | + | chr8.1:3589202-3589221 | MS.gene035660:CDS | 35.0% | |
| CTTGTGACTTGAAATTCGAA+TGG | + | chr8.1:3587672-3587691 | MS.gene035660:CDS | 35.0% | |
| GAACTCTGCAATCAAAATGA+AGG | + | chr8.1:3588969-3588988 | MS.gene035660:CDS | 35.0% | |
| GAAGAAAGAATTTGAAGGGA+AGG | + | chr8.1:3588426-3588445 | MS.gene035660:CDS | 35.0% | |
| GAGTATACTGTTTGTAGACA+AGG | + | chr8.1:3588796-3588815 | MS.gene035660:CDS | 35.0% | |
| GAGTCTAAAAGAGGTTACAT+TGG | + | chr8.1:3588289-3588308 | MS.gene035660:CDS | 35.0% | |
| GATCCTGTAGTAGTTAAAAG+GGG | + | chr8.1:3589791-3589810 | MS.gene035660:CDS | 35.0% | |
| GGACCGTTTATACAAACAAT+TGG | - | chr8.1:3588685-3588704 | None:intergenic | 35.0% | |
| GTTCGTGAAGAAATACTTAG+GGG | + | chr8.1:3588175-3588194 | MS.gene035660:CDS | 35.0% | |
| TATATCAACCATGAGGAATG+AGG | + | chr8.1:3590217-3590236 | MS.gene035660:CDS | 35.0% | |
| TGCGTTTCAATTCTTCTCAT+TGG | + | chr8.1:3587954-3587973 | MS.gene035660:CDS | 35.0% | |
| TTCAGATTCTGAATCAAGCA+AGG | + | chr8.1:3588563-3588582 | MS.gene035660:CDS | 35.0% | |
| TTGTCAATGTTGCATGATCT+TGG | + | chr8.1:3589492-3589511 | MS.gene035660:intron | 35.0% | |
| ! | CAAAAGGATCAACCTGTTTT+TGG | - | chr8.1:3589217-3589236 | None:intergenic | 35.0% |
| ! | CCAGATTTTCTTCTATGTCT+AGG | + | chr8.1:3590248-3590267 | MS.gene035660:CDS | 35.0% |
| ! | GATGACTTGGATTTGTTCAA+AGG | + | chr8.1:3588466-3588485 | MS.gene035660:CDS | 35.0% |
| ! | TTGATCCTTTTGGACTATGA+TGG | + | chr8.1:3589225-3589244 | MS.gene035660:CDS | 35.0% |
| ! | TTTTGGTATCTCTGTAAGCA+GGG | - | chr8.1:3589200-3589219 | None:intergenic | 35.0% |
| !! | ATGGATTCCTTTTTGACTGA+TGG | + | chr8.1:3589542-3589561 | MS.gene035660:intron | 35.0% |
| !! | GATTGGCATCAGATTTTGAT+TGG | + | chr8.1:3589600-3589619 | MS.gene035660:CDS | 35.0% |
| !! | GTTCTGTAGATTTCTGAAGT+AGG | - | chr8.1:3588148-3588167 | None:intergenic | 35.0% |
| !! | TAGACAAGGAAGTGTTGAAT+TGG | + | chr8.1:3588810-3588829 | MS.gene035660:CDS | 35.0% |
| !! | TGGTTTTACCAACTTACTTG+AGG | + | chr8.1:3588074-3588093 | MS.gene035660:CDS | 35.0% |
| !! | TTACGAGAAATTGGTGATGA+AGG | - | chr8.1:3587608-3587627 | None:intergenic | 35.0% |
| !! | TTTGGCATTGAGGAATCTTT+TGG | + | chr8.1:3588504-3588523 | MS.gene035660:CDS | 35.0% |
| !! | TTTTTGGTATCTCTGTAAGC+AGG | - | chr8.1:3589201-3589220 | None:intergenic | 35.0% |
| !!! | AGGTATTGGGTTGAAGTTTT+TGG | + | chr8.1:3588486-3588505 | MS.gene035660:CDS | 35.0% |
| !!! | ATTTTTGGGATCACTGCATA+AGG | - | chr8.1:3589316-3589335 | None:intergenic | 35.0% |
| !!! | CAAAAACAGGTTGATCCTTT+TGG | + | chr8.1:3589215-3589234 | MS.gene035660:CDS | 35.0% |
| ACCATCAAGATTCTTCCTGT+GGG | + | chr8.1:3588337-3588356 | MS.gene035660:CDS | 40.0% | |
| AGGATTCCGAAAAGCAATTG+CGG | + | chr8.1:3588989-3589008 | MS.gene035660:CDS | 40.0% | |
| AGGATTTAGAGAGAGCTTGT+AGG | + | chr8.1:3589076-3589095 | MS.gene035660:CDS | 40.0% | |
| AGTGTTCATTGTTAGTGGCA+GGG | + | chr8.1:3589338-3589357 | MS.gene035660:CDS | 40.0% | |
| ATGAAGAAAACCAGTCGCTA+AGG | - | chr8.1:3589374-3589393 | None:intergenic | 40.0% | |
| ATTAAGGGGTGAAGTTGTGT+TGG | + | chr8.1:3588540-3588559 | MS.gene035660:CDS | 40.0% | |
| CAAGTGTTTGCATGCACTAT+TGG | + | chr8.1:3590335-3590354 | MS.gene035660:CDS | 40.0% | |
| CAATAGAATCTTTGCCGACA+AGG | + | chr8.1:3587994-3588013 | MS.gene035660:CDS | 40.0% | |
| CAATCTCAAACTTCACATCC+TGG | - | chr8.1:3588606-3588625 | None:intergenic | 40.0% | |
| CTTGTCGGCAAAGATTCTAT+TGG | - | chr8.1:3587996-3588015 | None:intergenic | 40.0% | |
| CTTTACACAGAAGCAACTGA+TGG | + | chr8.1:3589650-3589669 | MS.gene035660:CDS | 40.0% | |
| GAAACATCGTCAATGTTCCA+CGG | - | chr8.1:3588940-3588959 | None:intergenic | 40.0% | |
| GAGGGGAATGAGAAATTAAG+GGG | + | chr8.1:3588526-3588545 | MS.gene035660:CDS | 40.0% | |
| GGAGGGGAATGAGAAATTAA+GGG | + | chr8.1:3588525-3588544 | MS.gene035660:CDS | 40.0% | |
| GGATTTAGAGAGAGCTTGTA+GGG | + | chr8.1:3589077-3589096 | MS.gene035660:CDS | 40.0% | |
| GGTAGCATGTAGTGAAACAA+AGG | - | chr8.1:3587914-3587933 | None:intergenic | 40.0% | |
| GTGATGAACAATCTGGGTAT+AGG | + | chr8.1:3588659-3588678 | MS.gene035660:CDS | 40.0% | |
| TACCATCAAGATTCTTCCTG+TGG | + | chr8.1:3588336-3588355 | MS.gene035660:CDS | 40.0% | |
| TGATGAAGGAAGTGAAAGGT+TGG | - | chr8.1:3587594-3587613 | None:intergenic | 40.0% | |
| TGGAGGGGAATGAGAAATTA+AGG | + | chr8.1:3588524-3588543 | MS.gene035660:CDS | 40.0% | |
| TTGCATTGTGAATGCTGTGA+GGG | + | chr8.1:3588750-3588769 | MS.gene035660:CDS | 40.0% | |
| TTTGGTATCTCTGTAAGCAG+GGG | - | chr8.1:3589199-3589218 | None:intergenic | 40.0% | |
| ! | CAAGAAGCAGATCCTGATTT+TGG | + | chr8.1:3589716-3589735 | MS.gene035660:CDS | 40.0% |
| ! | CTCATCATTTTCCACTCCAA+GGG | - | chr8.1:3588842-3588861 | None:intergenic | 40.0% |
| ! | GCAACTTCTTCTTGTTGTGA+TGG | - | chr8.1:3587794-3587813 | None:intergenic | 40.0% |
| ! | GCATTGAGGAATCTTTTGGA+GGG | + | chr8.1:3588508-3588527 | MS.gene035660:CDS | 40.0% |
| ! | GCTTTGTTAATTGATCCCTG+AGG | - | chr8.1:3589261-3589280 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAGCAGGATGTT+GGG | + | chr8.1:3588256-3588275 | MS.gene035660:CDS | 40.0% |
| ! | TGTCGTTGAAACTTCTGGAA+CGG | - | chr8.1:3587566-3587585 | None:intergenic | 40.0% |
| !! | AAGGGAAGGTTCTGATTTTG+GGG | + | chr8.1:3588440-3588459 | MS.gene035660:CDS | 40.0% |
| !! | ATTCCTTTTTGACTGATGGC+AGG | + | chr8.1:3589546-3589565 | MS.gene035660:intron | 40.0% |
| !! | CATTGAGGAATCTTTTGGAG+GGG | + | chr8.1:3588509-3588528 | MS.gene035660:CDS | 40.0% |
| !! | CGTTGGTTCGTTAAAATCAC+AGG | + | chr8.1:3587757-3587776 | MS.gene035660:CDS | 40.0% |
| !! | GAAGGGAAGGTTCTGATTTT+GGG | + | chr8.1:3588439-3588458 | MS.gene035660:CDS | 40.0% |
| !! | TCATTGGCTTGCATACAAGA+AGG | + | chr8.1:3587970-3587989 | MS.gene035660:CDS | 40.0% |
| !! | TGAAGGGAAGGTTCTGATTT+TGG | + | chr8.1:3588438-3588457 | MS.gene035660:CDS | 40.0% |
| !! | TGTCCCCTTTTAACTACTAC+AGG | - | chr8.1:3589797-3589816 | None:intergenic | 40.0% |
| !! | TTGGGCTAAGAGTTTTGATC+AGG | + | chr8.1:3589056-3589075 | MS.gene035660:CDS | 40.0% |
| !! | TTGGTGATGAAGGAAGTGAA+AGG | - | chr8.1:3587598-3587617 | None:intergenic | 40.0% |
| !!! | GGTTGAAGTTTTTGGCATTG+AGG | + | chr8.1:3588494-3588513 | MS.gene035660:CDS | 40.0% |
| ACACCTTGACTCTTTGACAG+AGG | - | chr8.1:3587935-3587954 | None:intergenic | 45.0% | |
| ATTGTGAATGCTGTGAGGGA+TGG | + | chr8.1:3588754-3588773 | MS.gene035660:CDS | 45.0% | |
| CAGTGTTCATTGTTAGTGGC+AGG | + | chr8.1:3589337-3589356 | MS.gene035660:CDS | 45.0% | |
| CATGTTATCAGACTGCTGGA+AGG | + | chr8.1:3590401-3590420 | MS.gene035660:CDS | 45.0% | |
| CCATCAAGATTCTTCCTGTG+GGG | + | chr8.1:3588338-3588357 | MS.gene035660:CDS | 45.0% | |
| CCTTGGAGTGGAAAATGATG+AGG | + | chr8.1:3588840-3588859 | MS.gene035660:CDS | 45.0% | |
| CGGAACATGGTTACTTCACA+AGG | + | chr8.1:3589415-3589434 | MS.gene035660:CDS | 45.0% | |
| CTACCTCTGTCAAAGAGTCA+AGG | + | chr8.1:3587929-3587948 | MS.gene035660:CDS | 45.0% | |
| CTCTCATGACGTAGCGTATT+GGG | + | chr8.1:3589038-3589057 | MS.gene035660:CDS | 45.0% | |
| CTGAATCAAGCAAGGAGTAG+CGG | + | chr8.1:3588571-3588590 | MS.gene035660:CDS | 45.0% | |
| GCAAACACTTGTGATGTGGT+TGG | - | chr8.1:3590326-3590345 | None:intergenic | 45.0% | |
| GCATGCAAACACTTGTGATG+TGG | - | chr8.1:3590330-3590349 | None:intergenic | 45.0% | |
| GTGTTCATTGTTAGTGGCAG+GGG | + | chr8.1:3589339-3589358 | MS.gene035660:CDS | 45.0% | |
| GTTGAATTGGACAAAGCCCT+TGG | + | chr8.1:3588823-3588842 | MS.gene035660:CDS | 45.0% | |
| GTTGCATTGTGAATGCTGTG+AGG | + | chr8.1:3588749-3588768 | MS.gene035660:CDS | 45.0% | |
| TGACAAATTGGGTCTCTCTG+CGG | + | chr8.1:3589395-3589414 | MS.gene035660:CDS | 45.0% | |
| TGACTTCTCCTCATTCCTCA+TGG | - | chr8.1:3590228-3590247 | None:intergenic | 45.0% | |
| TGGTCATGTTATCAGACTGC+TGG | + | chr8.1:3590397-3590416 | MS.gene035660:CDS | 45.0% | |
| TGTGAGCAAAGGTAAAGTGG+TGG | + | chr8.1:3590187-3590206 | MS.gene035660:CDS | 45.0% | |
| TTGTAGCAGGATGTTGGGTT+TGG | + | chr8.1:3588261-3588280 | MS.gene035660:CDS | 45.0% | |
| TTGTGAATGCTGTGAGGGAT+GGG | + | chr8.1:3588755-3588774 | MS.gene035660:CDS | 45.0% | |
| ! | AAGTCACAAGAAGCGCGTAT+TGG | - | chr8.1:3587662-3587681 | None:intergenic | 45.0% |
| ! | AATTGATCCCTGAGGCATCA+TGG | - | chr8.1:3589253-3589272 | None:intergenic | 45.0% |
| ! | CACTTGTGATGTGGTTGGTA+AGG | - | chr8.1:3590321-3590340 | None:intergenic | 45.0% |
| ! | CAGATCCTGATTTTGGACTG+TGG | + | chr8.1:3589723-3589742 | MS.gene035660:CDS | 45.0% |
| ! | CCTCATCATTTTCCACTCCA+AGG | - | chr8.1:3588843-3588862 | None:intergenic | 45.0% |
| ! | GAGTAGCGGAAAAGATATCC+AGG | + | chr8.1:3588585-3588604 | MS.gene035660:CDS | 45.0% |
| ! | GTCTTGTTGTAGCAGGATGT+TGG | + | chr8.1:3588255-3588274 | MS.gene035660:CDS | 45.0% |
| ! | TGTTCACCTTGAGAGTATGC+TGG | + | chr8.1:3589763-3589782 | MS.gene035660:CDS | 45.0% |
| !! | AGGGAAGGTTCTGATTTTGG+GGG | + | chr8.1:3588441-3588460 | MS.gene035660:CDS | 45.0% |
| !! | CTTGTGCCGCAATTGCTTTT+CGG | - | chr8.1:3588998-3589017 | None:intergenic | 45.0% |
| !! | GGCATTGAGGAATCTTTTGG+AGG | + | chr8.1:3588507-3588526 | MS.gene035660:CDS | 45.0% |
| !! | GTCCTCTGAAACAGCTAAGA+GGG | + | chr8.1:3588393-3588412 | MS.gene035660:CDS | 45.0% |
| !! | TGGTGCCATCATAGTCCAAA+AGG | - | chr8.1:3589233-3589252 | None:intergenic | 45.0% |
| !!! | GATTTTGGGGGTTGATGACT+TGG | + | chr8.1:3588453-3588472 | MS.gene035660:CDS | 45.0% |
| ATTGGACAAAGCCCTTGGAG+TGG | + | chr8.1:3588828-3588847 | MS.gene035660:CDS | 50.0% | |
| CAAAACCTCGCGAACCTTGT+CGG | - | chr8.1:3588011-3588030 | None:intergenic | 50.0% | |
| CATTGGCCAGCATACTCTCA+AGG | - | chr8.1:3589772-3589791 | None:intergenic | 50.0% | |
| CCACATGGGTCTTCTCGAAT+CGG | + | chr8.1:3588363-3588382 | MS.gene035660:CDS | 50.0% | |
| CCACCTGCCATCAGTCAAAA+AGG | - | chr8.1:3589552-3589571 | None:intergenic | 50.0% | |
| CCCCACAGGAAGAATCTTGA+TGG | - | chr8.1:3588341-3588360 | None:intergenic | 50.0% | |
| GAAATGCAGGGTGTGAGCAA+AGG | + | chr8.1:3590176-3590195 | MS.gene035660:intron | 50.0% | |
| GCTCTCATGACGTAGCGTAT+TGG | + | chr8.1:3589037-3589056 | MS.gene035660:CDS | 50.0% | |
| GCTTGCCACAGTCCAAAATC+AGG | - | chr8.1:3589731-3589750 | None:intergenic | 50.0% | |
| GGGTGTGAGCAAAGGTAAAG+TGG | + | chr8.1:3590184-3590203 | MS.gene035660:intron | 50.0% | |
| GTAGAGTTTGCCTTAGCGAC+TGG | + | chr8.1:3589361-3589380 | MS.gene035660:CDS | 50.0% | |
| ! | CACCCTCTTAGCTGTTTCAG+AGG | - | chr8.1:3588398-3588417 | None:intergenic | 50.0% |
| !! | CCTTTTTGACTGATGGCAGG+TGG | + | chr8.1:3589549-3589568 | MS.gene035660:intron | 50.0% |
| !! | CGTCCTCTGAAACAGCTAAG+AGG | + | chr8.1:3588392-3588411 | MS.gene035660:CDS | 50.0% |
| AAACGGTCCGGTTTCGACTC+AGG | + | chr8.1:3588696-3588715 | MS.gene035660:CDS | 55.0% | |
| CTTCCTGTGGGGATCCACAT+GGG | + | chr8.1:3588349-3588368 | MS.gene035660:CDS | 55.0% | |
| GACTGATGGCAGGTGGAGTA+AGG | + | chr8.1:3589556-3589575 | MS.gene035660:intron | 55.0% | |
| GATGGCACCATGATGCCTCA+GGG | + | chr8.1:3589243-3589262 | MS.gene035660:CDS | 55.0% | |
| GATTCTCCCTGGACGACTCT+CGG | + | chr8.1:3589578-3589597 | MS.gene035660:CDS | 55.0% | |
| GCCTTCTCCTGAGTCGAAAC+CGG | - | chr8.1:3588706-3588725 | None:intergenic | 55.0% | |
| GGTGGAGTAAGGATTCTCCC+TGG | + | chr8.1:3589567-3589586 | MS.gene035660:intron | 55.0% | |
| GGTTGTTCGCCTTCACTCAG+CGG | + | chr8.1:3588898-3588917 | MS.gene035660:CDS | 55.0% | |
| GTTGTTCGCCTTCACTCAGC+GGG | + | chr8.1:3588899-3588918 | MS.gene035660:CDS | 55.0% | |
| TCCGGTTTCGACTCAGGAGA+AGG | + | chr8.1:3588702-3588721 | MS.gene035660:CDS | 55.0% | |
| TCTTCCTGTGGGGATCCACA+TGG | + | chr8.1:3588348-3588367 | MS.gene035660:CDS | 55.0% | |
| TGATGGCACCATGATGCCTC+AGG | + | chr8.1:3589242-3589261 | MS.gene035660:CDS | 55.0% | |
| TTGGGTCTCTCTGCGGAACA+TGG | + | chr8.1:3589402-3589421 | MS.gene035660:CDS | 55.0% | |
| TTGTTCGCCTTCACTCAGCG+GGG | + | chr8.1:3588900-3588919 | MS.gene035660:CDS | 55.0% | |
| ! | CCGATTCGAGAAGACCCATG+TGG | - | chr8.1:3588366-3588385 | None:intergenic | 55.0% |
| AGACCCATGTGGATCCCCAC+AGG | - | chr8.1:3588355-3588374 | None:intergenic | 60.0% | |
| CTTTGCCGACAAGGTTCGCG+AGG | + | chr8.1:3588003-3588022 | MS.gene035660:CDS | 60.0% | |
| GCCAATCCGAGAGTCGTCCA+GGG | - | chr8.1:3589587-3589606 | None:intergenic | 60.0% | |
| TCCCTGGACGACTCTCGGAT+TGG | + | chr8.1:3589583-3589602 | MS.gene035660:CDS | 60.0% | |
| TGCCAATCCGAGAGTCGTCC+AGG | - | chr8.1:3589588-3589607 | None:intergenic | 60.0% | |
| CTTCACTCAGCGGGGCGGTT+CGG | + | chr8.1:3588908-3588927 | MS.gene035660:CDS | 65.0% | |
| TTCACTCAGCGGGGCGGTTC+GGG | + | chr8.1:3588909-3588928 | MS.gene035660:CDS | 65.0% | |
| TTCGCCTTCACTCAGCGGGG+CGG | + | chr8.1:3588903-3588922 | MS.gene035660:CDS | 65.0% | |
| CGAACCGCCCCGCTGAGTGA+AGG | - | chr8.1:3588910-3588929 | None:intergenic | 70.0% | |
| ! | GGGCGGTTCGGGTGAATCCG+TGG | + | chr8.1:3588920-3588939 | MS.gene035660:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 3587557 | 3590463 | 3587557 | ID=MS.gene035660 |
| chr8.1 | mRNA | 3587557 | 3590463 | 3587557 | ID=MS.gene035660.t1;Parent=MS.gene035660 |
| chr8.1 | exon | 3587557 | 3589436 | 3587557 | ID=MS.gene035660.t1.exon1;Parent=MS.gene035660.t1 |
| chr8.1 | CDS | 3587557 | 3589436 | 3587557 | ID=cds.MS.gene035660.t1;Parent=MS.gene035660.t1 |
| chr8.1 | exon | 3589568 | 3589841 | 3589568 | ID=MS.gene035660.t1.exon2;Parent=MS.gene035660.t1 |
| chr8.1 | CDS | 3589568 | 3589841 | 3589568 | ID=cds.MS.gene035660.t1;Parent=MS.gene035660.t1 |
| chr8.1 | exon | 3590185 | 3590463 | 3590185 | ID=MS.gene035660.t1.exon3;Parent=MS.gene035660.t1 |
| chr8.1 | CDS | 3590185 | 3590463 | 3590185 | ID=cds.MS.gene035660.t1;Parent=MS.gene035660.t1 |
| Gene Sequence |
| Protein sequence |
