Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57938.t1 | XP_003610217.1 | 96.7 | 814 | 23 | 1 | 1 | 810 | 32 | 845 | 0.00E+00 | 1606.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57938.t1 | Q9ZV48 | 66.1 | 790 | 255 | 6 | 24 | 803 | 49 | 835 | 0.0e+00 | 1090.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57938.t1 | G7JEA0 | 96.7 | 814 | 23 | 1 | 1 | 810 | 32 | 845 | 0.0e+00 | 1606.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051959 | MS.gene57938 | 0.805725 | 1.16E-49 | -1.69E-46 |
| MS.gene051960 | MS.gene57938 | 0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene053083 | MS.gene57938 | 0.840118 | 1.05E-57 | -1.69E-46 |
| MS.gene055765 | MS.gene57938 | 0.830024 | 3.71E-55 | -1.69E-46 |
| MS.gene059510 | MS.gene57938 | 0.807727 | 4.39E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57938 | MS.gene71003 | PPI |
| MS.gene57938 | MS.gene95324 | PPI |
| MS.gene57938 | MS.gene015639 | PPI |
| MS.gene57938 | MS.gene009143 | PPI |
| MS.gene95835 | MS.gene57938 | PPI |
| MS.gene57938 | MS.gene026499 | PPI |
| MS.gene62674 | MS.gene57938 | PPI |
| MS.gene57938 | MS.gene73417 | PPI |
| MS.gene57938 | MS.gene029463 | PPI |
| MS.gene57938 | MS.gene75183 | PPI |
| MS.gene57938 | MS.gene71778 | PPI |
| MS.gene038603 | MS.gene57938 | PPI |
| MS.gene83030 | MS.gene57938 | PPI |
| MS.gene57938 | MS.gene031592 | PPI |
| MS.gene57938 | MS.gene040931 | PPI |
| MS.gene045478 | MS.gene57938 | PPI |
| MS.gene57938 | MS.gene006702 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57938.t1 | MTR_4g129270 | 96.683 | 814 | 23 | 1 | 1 | 810 | 32 | 845 | 0.0 | 1636 |
| MS.gene57938.t1 | MTR_4g129270 | 96.676 | 722 | 20 | 1 | 1 | 718 | 32 | 753 | 0.0 | 1454 |
| MS.gene57938.t1 | MTR_8g063790 | 62.247 | 792 | 285 | 5 | 24 | 805 | 52 | 839 | 0.0 | 1038 |
| MS.gene57938.t1 | MTR_1g109620 | 60.401 | 798 | 302 | 7 | 17 | 806 | 53 | 844 | 0.0 | 1007 |
| MS.gene57938.t1 | MTR_8g105740 | 58.809 | 806 | 313 | 8 | 12 | 803 | 47 | 847 | 0.0 | 1001 |
| MS.gene57938.t1 | MTR_1g032730 | 59.273 | 798 | 306 | 8 | 24 | 807 | 61 | 853 | 0.0 | 994 |
| MS.gene57938.t1 | MTR_4g080160 | 59.010 | 788 | 307 | 6 | 26 | 803 | 67 | 848 | 0.0 | 979 |
| MS.gene57938.t1 | MTR_3g078210 | 53.581 | 754 | 338 | 6 | 46 | 793 | 5 | 752 | 0.0 | 813 |
| MS.gene57938.t1 | MTR_3g467030 | 46.269 | 603 | 284 | 7 | 27 | 623 | 1 | 569 | 3.26e-172 | 509 |
| MS.gene57938.t1 | MTR_0034s0170 | 35.458 | 753 | 427 | 20 | 24 | 756 | 83 | 796 | 6.36e-137 | 429 |
| MS.gene57938.t1 | MTR_2g073260 | 33.641 | 758 | 435 | 20 | 24 | 757 | 122 | 835 | 4.98e-134 | 422 |
| MS.gene57938.t1 | MTR_8g087910 | 40.741 | 324 | 178 | 7 | 23 | 344 | 74 | 385 | 2.74e-71 | 239 |
| MS.gene57938.t1 | MTR_8g087930 | 29.953 | 424 | 249 | 13 | 350 | 757 | 10 | 401 | 1.27e-50 | 186 |
| MS.gene57938.t1 | MTR_3g076810 | 46.154 | 156 | 74 | 4 | 6 | 154 | 17 | 169 | 4.76e-35 | 131 |
| MS.gene57938.t1 | MTR_3g467040 | 45.133 | 113 | 61 | 1 | 448 | 559 | 110 | 222 | 1.39e-26 | 109 |
| MS.gene57938.t1 | MTR_3g467040 | 38.793 | 116 | 69 | 1 | 271 | 386 | 1 | 114 | 6.07e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57938.t1 | AT2G18700 | 66.076 | 790 | 255 | 6 | 24 | 803 | 49 | 835 | 0.0 | 1101 |
| MS.gene57938.t1 | AT1G23870 | 60.782 | 793 | 297 | 5 | 24 | 806 | 58 | 846 | 0.0 | 1037 |
| MS.gene57938.t1 | AT1G70290 | 60.483 | 787 | 294 | 6 | 24 | 800 | 56 | 835 | 0.0 | 1003 |
| MS.gene57938.t1 | AT4G17770 | 59.518 | 788 | 306 | 5 | 26 | 804 | 61 | 844 | 0.0 | 995 |
| MS.gene57938.t1 | AT4G17770 | 59.518 | 788 | 306 | 5 | 26 | 804 | 61 | 844 | 0.0 | 995 |
| MS.gene57938.t1 | AT1G60140 | 58.302 | 801 | 315 | 6 | 14 | 804 | 53 | 844 | 0.0 | 992 |
| MS.gene57938.t1 | AT1G60140 | 58.302 | 801 | 315 | 6 | 14 | 804 | 53 | 844 | 0.0 | 992 |
| MS.gene57938.t1 | AT1G60140 | 58.302 | 801 | 315 | 6 | 14 | 804 | 53 | 844 | 0.0 | 992 |
| MS.gene57938.t1 | AT1G60140 | 58.302 | 801 | 315 | 6 | 14 | 804 | 53 | 844 | 0.0 | 992 |
| MS.gene57938.t1 | AT1G60140 | 58.302 | 801 | 315 | 6 | 14 | 804 | 53 | 844 | 0.0 | 992 |
| MS.gene57938.t1 | AT1G06410 | 58.040 | 796 | 313 | 8 | 26 | 810 | 60 | 845 | 0.0 | 976 |
| MS.gene57938.t1 | AT1G06410 | 58.040 | 796 | 313 | 8 | 26 | 810 | 60 | 845 | 0.0 | 976 |
| MS.gene57938.t1 | AT1G06410 | 58.040 | 796 | 313 | 8 | 26 | 810 | 60 | 845 | 0.0 | 976 |
| MS.gene57938.t1 | AT1G68020 | 57.407 | 810 | 314 | 8 | 21 | 803 | 49 | 854 | 0.0 | 971 |
| MS.gene57938.t1 | AT1G68020 | 57.407 | 810 | 314 | 8 | 21 | 803 | 49 | 854 | 0.0 | 971 |
| MS.gene57938.t1 | AT1G70290 | 55.909 | 787 | 292 | 7 | 24 | 800 | 56 | 797 | 0.0 | 904 |
| MS.gene57938.t1 | AT1G60140 | 59.494 | 711 | 273 | 5 | 14 | 718 | 53 | 754 | 0.0 | 899 |
| MS.gene57938.t1 | AT1G68020 | 57.795 | 635 | 241 | 7 | 21 | 632 | 49 | 679 | 0.0 | 771 |
| MS.gene57938.t1 | AT1G16980 | 33.087 | 813 | 473 | 22 | 24 | 808 | 11 | 780 | 1.32e-135 | 422 |
| MS.gene57938.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 2.17e-135 | 426 |
| MS.gene57938.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 2.17e-135 | 426 |
| MS.gene57938.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 2.17e-135 | 426 |
| MS.gene57938.t1 | AT1G78580 | 34.656 | 756 | 430 | 20 | 24 | 756 | 91 | 805 | 2.17e-135 | 426 |
| MS.gene57938.t1 | AT4G27550 | 31.907 | 818 | 475 | 19 | 24 | 799 | 3 | 780 | 7.54e-128 | 401 |
| MS.gene57938.t1 | AT4G27550 | 31.746 | 819 | 484 | 19 | 24 | 799 | 3 | 789 | 9.58e-127 | 399 |
| MS.gene57938.t1 | AT1G16980 | 34.169 | 638 | 363 | 17 | 22 | 645 | 9 | 603 | 7.95e-112 | 355 |
Find 164 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGGAAGGTTCTGATTT+TGG | 0.120895 | 8.4:+5456744 | MS.gene57938:CDS |
| CAAGAAGCAGATCCTGATTT+TGG | 0.199178 | 8.4:+5458028 | MS.gene57938:CDS |
| AGGCCAATTGTTTGTATAAA+TGG | 0.221539 | 8.4:+5456985 | MS.gene57938:CDS |
| ATGATCCTGTAGTAGTTAAA+AGG | 0.228717 | 8.4:+5458101 | MS.gene57938:CDS |
| ATTCTTCGTTTACGAGAAAT+TGG | 0.240051 | 8.4:-5455920 | None:intergenic |
| ATATTTGTCATTAACTTCTT+TGG | 0.249338 | 8.4:-5456941 | None:intergenic |
| AATATTGTCGTTGAAACTTC+TGG | 0.252033 | 8.4:-5455874 | None:intergenic |
| TGGAGGGGAATGAGAAATTA+AGG | 0.263134 | 8.4:+5456830 | MS.gene57938:CDS |
| CAAGTGTTTGCATGCACTAT+TGG | 0.286479 | 8.4:+5458647 | MS.gene57938:CDS |
| TTTGGCATTGAAGAATCTTT+TGG | 0.287438 | 8.4:+5456810 | MS.gene57938:CDS |
| TTCACTCAGCGGGGCGGTTC+GGG | 0.301816 | 8.4:+5457215 | MS.gene57938:CDS |
| CTTGTGCCGCAATTGCTTCT+CGG | 0.303934 | 8.4:-5457301 | None:intergenic |
| CTTCACTCAGCGGGGCGGTT+CGG | 0.306761 | 8.4:+5457214 | MS.gene57938:CDS |
| CTTCAACTCTTTCACCCTCT+TGG | 0.308151 | 8.4:-5456713 | None:intergenic |
| TGCGTTTCAATTCTTCTCAT+TGG | 0.309786 | 8.4:+5456260 | MS.gene57938:CDS |
| TTGGATTTGTTCAAAGGTAT+TGG | 0.319105 | 8.4:+5456778 | MS.gene57938:CDS |
| AAGTAGGGCTAAATACTATT+TGG | 0.326557 | 8.4:+5458679 | MS.gene57938:CDS |
| CTCTCATGATGTAGCGTATT+GGG | 0.327023 | 8.4:+5457344 | MS.gene57938:CDS |
| GTTTCTGTAAGCATTATCTT+TGG | 0.328259 | 8.4:+5456194 | MS.gene57938:CDS |
| AATTAACAAAGCTCCTAGTT+TGG | 0.333947 | 8.4:+5457575 | MS.gene57938:CDS |
| GGTTCATGATTATCATCTAA+TGG | 0.341092 | 8.4:+5456360 | MS.gene57938:CDS |
| AAAGAAGTTAATGACAAATA+TGG | 0.343946 | 8.4:+5456943 | MS.gene57938:CDS |
| TGGATTTGTTCAAAGGTATT+GGG | 0.345683 | 8.4:+5456779 | MS.gene57938:CDS |
| AATACAGTGTTCATTGTTAG+TGG | 0.360290 | 8.4:+5457639 | MS.gene57938:CDS |
| TTTAACTACTACAGGATCAT+TGG | 0.373736 | 8.4:-5458098 | None:intergenic |
| ATCATTGTTTCTGAGTTCAT+TGG | 0.382781 | 8.4:+5457183 | MS.gene57938:CDS |
| TAGACAAGGAAGTGTTGAAT+TGG | 0.390593 | 8.4:+5457116 | MS.gene57938:CDS |
| AAATACTATTTGGATGATAC+TGG | 0.392235 | 8.4:+5458689 | MS.gene57938:CDS |
| GCTTGCCACAGTCCAAAATC+AGG | 0.397022 | 8.4:-5458040 | None:intergenic |
| ATCCTGATGAAGATTATGTT+TGG | 0.404447 | 8.4:+5456338 | MS.gene57938:CDS |
| CAAAACCTCGCGAACCTTGT+CGG | 0.407094 | 8.4:-5456314 | None:intergenic |
| CCTAGACATAGAAGAAAATC+TGG | 0.408487 | 8.4:-5458560 | None:intergenic |
| GCAACTTCTTCTTGTTGTGA+TGG | 0.411196 | 8.4:-5456097 | None:intergenic |
| CTCAAGATATATGTGGGATT+AGG | 0.419772 | 8.4:+5457414 | MS.gene57938:CDS |
| CTAAGTATTTCTTCACGAAC+AGG | 0.420112 | 8.4:-5456478 | None:intergenic |
| TTGTAGCAGGATGTTGGGTT+TGG | 0.421912 | 8.4:+5456567 | MS.gene57938:CDS |
| CAGTGTTCATTGTTAGTGGC+AGG | 0.422219 | 8.4:+5457643 | MS.gene57938:CDS |
| CTTGTCGGCAAAGATTCTAT+TGG | 0.423981 | 8.4:-5456299 | None:intergenic |
| GACTGATGGCAGGTGGAGTA+AGG | 0.425232 | 8.4:+5457868 | MS.gene57938:intron |
| GGACCATTTATACAAACAAT+TGG | 0.426162 | 8.4:-5456988 | None:intergenic |
| TGCCAATCCGAGAGTCGTCC+AGG | 0.433203 | 8.4:-5457897 | None:intergenic |
| GCCTTCTCCTGAGTCGAAAC+CGG | 0.435832 | 8.4:-5457009 | None:intergenic |
| TGATGGCACCATGATGCCTC+AGG | 0.435835 | 8.4:+5457548 | MS.gene57938:CDS |
| AAATAGTATTTAGCCCTACT+TGG | 0.436019 | 8.4:-5458677 | None:intergenic |
| GTCTTGTTGTAGCAGGATGT+TGG | 0.445329 | 8.4:+5456561 | MS.gene57938:CDS |
| TTGTTGAACTGTGATTTGAT+TGG | 0.446772 | 8.4:+5456505 | MS.gene57938:CDS |
| TGATCCTGTAGTAGTTAAAA+GGG | 0.447623 | 8.4:+5458102 | MS.gene57938:CDS |
| GTTGTTCGCCTTCACTCAGC+GGG | 0.449644 | 8.4:+5457205 | MS.gene57938:CDS |
| CCACATGGGTCTTCTCGAAT+CGG | 0.450549 | 8.4:+5456669 | MS.gene57938:CDS |
| TACATTGGTGTTGATTACTT+TGG | 0.450702 | 8.4:+5456610 | MS.gene57938:CDS |
| TTGGAAAATTAATGTAGAAA+AGG | 0.451444 | 8.4:+5457931 | MS.gene57938:CDS |
| AGGATTTAGAGAGAGCTTGT+AGG | 0.454660 | 8.4:+5457382 | MS.gene57938:CDS |
| CACCCTCTTGGCTGTTTCAG+AGG | 0.454916 | 8.4:-5456701 | None:intergenic |
| TCTTGTTGTAGCAGGATGTT+GGG | 0.455109 | 8.4:+5456562 | MS.gene57938:CDS |
| CTGTTCGTGAAGAAATACTT+AGG | 0.456072 | 8.4:+5456479 | MS.gene57938:CDS |
| GTGATGAACAATCTGGGTAT+AGG | 0.457022 | 8.4:+5456965 | MS.gene57938:CDS |
| AATTGTTTGTATAAATGGTC+CGG | 0.460940 | 8.4:+5456990 | MS.gene57938:CDS |
| GATGACTTGGATTTGTTCAA+AGG | 0.461719 | 8.4:+5456772 | MS.gene57938:CDS |
| GCTCTCATGATGTAGCGTAT+TGG | 0.467021 | 8.4:+5457343 | MS.gene57938:CDS |
| GTTCTGTAGATTTCTGAAGT+AGG | 0.470644 | 8.4:-5456451 | None:intergenic |
| GGATTTAGAGAGAGCTTGTA+GGG | 0.471625 | 8.4:+5457383 | MS.gene57938:CDS |
| GAAGAAAGAATTTGAAGGGA+AGG | 0.471883 | 8.4:+5456732 | MS.gene57938:CDS |
| AAATATGGTGATGAACAATC+TGG | 0.477180 | 8.4:+5456958 | MS.gene57938:CDS |
| TTACGAGAAATTGGTGATGA+AGG | 0.479580 | 8.4:-5455911 | None:intergenic |
| TCCTGATGAAGATTATGTTT+GGG | 0.480347 | 8.4:+5456339 | MS.gene57938:CDS |
| CGTTGGTTCGTTAAAATCAC+AGG | 0.480855 | 8.4:+5456063 | MS.gene57938:CDS |
| CCCCACAGGAAGAATCTTGA+TGG | 0.481795 | 8.4:-5456644 | None:intergenic |
| TTGTGACTTGAAATTCGAAT+GGG | 0.482906 | 8.4:+5455979 | MS.gene57938:CDS |
| TTGGATTATGAGTCTAAAAG+AGG | 0.484605 | 8.4:+5456586 | MS.gene57938:CDS |
| CTTGTGACTTGAAATTCGAA+TGG | 0.485275 | 8.4:+5455978 | MS.gene57938:CDS |
| ACCCAAACATAATCTTCATC+AGG | 0.489582 | 8.4:-5456340 | None:intergenic |
| TGTTCACCTTGAGAGTATGC+TGG | 0.489913 | 8.4:+5458075 | MS.gene57938:CDS |
| AAATGGTCCGGTTTCGACTC+AGG | 0.490258 | 8.4:+5457002 | MS.gene57938:CDS |
| TGGTCATGTTATCAGACTGC+TGG | 0.493365 | 8.4:+5458709 | MS.gene57938:CDS |
| TGACTTCTCCTCATTCCTCA+TGG | 0.494550 | 8.4:-5458537 | None:intergenic |
| ATTAAGGGGTGAAGTTGTGT+TGG | 0.495890 | 8.4:+5456846 | MS.gene57938:CDS |
| AGTTGAAGAAAGAATTTGAA+GGG | 0.498193 | 8.4:+5456728 | MS.gene57938:CDS |
| TAAATCCTGATCAAAACTCT+TGG | 0.498362 | 8.4:-5457367 | None:intergenic |
| GTGTTCATTGTTAGTGGCAG+GGG | 0.498938 | 8.4:+5457645 | MS.gene57938:CDS |
| AAACGTTTCCTCAAGTAAGT+TGG | 0.499254 | 8.4:-5456388 | None:intergenic |
| GAACTCAGCAATCAAAATGA+AGG | 0.499316 | 8.4:+5457275 | MS.gene57938:CDS |
| TGGTGCCATCATAGTCCAAA+AGG | 0.499691 | 8.4:-5457536 | None:intergenic |
| TGTTCGTGAAGAAATACTTA+GGG | 0.500357 | 8.4:+5456480 | MS.gene57938:CDS |
| GTAGAGTTTGCCTTAGCGAC+TGG | 0.503290 | 8.4:+5457667 | MS.gene57938:CDS |
| GGAGGGGAATGAGAAATTAA+GGG | 0.505727 | 8.4:+5456831 | MS.gene57938:CDS |
| AAGTCACAAGAAGCGCGTAT+TGG | 0.516480 | 8.4:-5455965 | None:intergenic |
| CACTTGTGATGTGGTTGGTA+AGG | 0.520338 | 8.4:-5458630 | None:intergenic |
| TCCCTGGACGACTCTCGGAT+TGG | 0.522159 | 8.4:+5457895 | MS.gene57938:CDS |
| GGGCGGTTCGGGTGAATCCG+TGG | 0.535674 | 8.4:+5457226 | MS.gene57938:CDS |
| TCTTCCTGTGGGGATCCACA+TGG | 0.539623 | 8.4:+5456654 | MS.gene57938:CDS |
| GATTCTCCCTGGACGACTCT+CGG | 0.545192 | 8.4:+5457890 | MS.gene57938:CDS |
| TTGTGAATGCTGTGAGGGAT+GGG | 0.545495 | 8.4:+5457061 | MS.gene57938:CDS |
| ACCATCAAGATTCTTCCTGT+GGG | 0.546402 | 8.4:+5456643 | MS.gene57938:CDS |
| GAGTAGCGGAAAAGATATCC+AGG | 0.550385 | 8.4:+5456891 | MS.gene57938:CDS |
| GCATTATCTCAAGATATATG+TGG | 0.551844 | 8.4:+5457407 | MS.gene57938:CDS |
| CAATAGAATCTTTGCCGACA+AGG | 0.552855 | 8.4:+5456300 | MS.gene57938:CDS |
| ATGGAGAAAACCAGTCGCTA+AGG | 0.553868 | 8.4:-5457677 | None:intergenic |
| ATTGGACAAATCACTTGGAG+TGG | 0.554082 | 8.4:+5457134 | MS.gene57938:CDS |
| TACCATCAAGATTCTTCCTG+TGG | 0.554669 | 8.4:+5456642 | MS.gene57938:CDS |
| CTTCCTGTGGGGATCCACAT+GGG | 0.555318 | 8.4:+5456655 | MS.gene57938:CDS |
| CAATCTCAAACTTCACATCC+TGG | 0.558555 | 8.4:-5456909 | None:intergenic |
| CTATTGGTTATAAACCAAGT+AGG | 0.558755 | 8.4:+5458663 | MS.gene57938:CDS |
| CTACAAACAATATACTCGTA+AGG | 0.559815 | 8.4:-5457096 | None:intergenic |
| TATTGTTGAAGTAAAACCTC+AGG | 0.563515 | 8.4:+5458132 | MS.gene57938:CDS |
| GAGTTGAAGAAAGAATTTGA+AGG | 0.566060 | 8.4:+5456727 | MS.gene57938:CDS |
| TGATGAAGGAAGTGAAAGGT+TGG | 0.568415 | 8.4:-5455897 | None:intergenic |
| TCATTGGCTTGCATACAAGA+AGG | 0.571083 | 8.4:+5456276 | MS.gene57938:CDS |
| CAGAACATGGTTACTTCACA+AGG | 0.571206 | 8.4:+5457721 | MS.gene57938:CDS |
| GTTGAATTGGACAAATCACT+TGG | 0.573251 | 8.4:+5457129 | MS.gene57938:CDS |
| AGTGTTCATTGTTAGTGGCA+GGG | 0.574176 | 8.4:+5457644 | MS.gene57938:CDS |
| TCCGGTTTCGACTCAGGAGA+AGG | 0.576535 | 8.4:+5457008 | MS.gene57938:CDS |
| ATTGTGAATGCTGTGAGGGA+TGG | 0.578772 | 8.4:+5457060 | MS.gene57938:CDS |
| TATATCAACCATGAGGAATG+AGG | 0.581492 | 8.4:+5458529 | MS.gene57938:CDS |
| TATTGGTTATAAACCAAGTA+GGG | 0.583751 | 8.4:+5458664 | MS.gene57938:CDS |
| AGACCCATGTGGATCCCCAC+AGG | 0.588284 | 8.4:-5456658 | None:intergenic |
| AGAGAGATAACATCCAAACT+AGG | 0.589770 | 8.4:-5457588 | None:intergenic |
| AAATCATTGTGAGTTTCAGA+AGG | 0.591816 | 8.4:-5456163 | None:intergenic |
| CGAACCGCCCCGCTGAGTGA+AGG | 0.592523 | 8.4:-5457213 | None:intergenic |
| AGACAAAGCTTCTTAAAACT+AGG | 0.593436 | 8.4:-5457468 | None:intergenic |
| AATATGGTGATGAACAATCT+GGG | 0.594049 | 8.4:+5456959 | MS.gene57938:CDS |
| AATTGATCCCTGAGGCATCA+TGG | 0.598853 | 8.4:-5457556 | None:intergenic |
| CTTTGCCGACAAGGTTCGCG+AGG | 0.599029 | 8.4:+5456309 | MS.gene57938:CDS |
| AATTAATGTAGAAAAGGTGA+TGG | 0.600049 | 8.4:+5457937 | MS.gene57938:CDS |
| GTCCTCTGAAACAGCCAAGA+GGG | 0.604328 | 8.4:+5456699 | MS.gene57938:CDS |
| CATTATCTCAAGATATATGT+GGG | 0.605992 | 8.4:+5457408 | MS.gene57938:CDS |
| TTCAGATTCTGAATCAAGCA+AGG | 0.606163 | 8.4:+5456869 | MS.gene57938:CDS |
| TGTGAGCAAAGGTAAAGTGG+TGG | 0.606477 | 8.4:+5458499 | MS.gene57938:CDS |
| GAGTCTAAAAGAGGTTACAT+TGG | 0.608056 | 8.4:+5456595 | MS.gene57938:CDS |
| TTGGGTCTCTCTGCAGAACA+TGG | 0.608980 | 8.4:+5457708 | MS.gene57938:CDS |
| GGTGGAGTAAGGATTCTCCC+TGG | 0.609902 | 8.4:+5457879 | MS.gene57938:intron |
| TGTCGTTGAAACTTCTGGAA+CGG | 0.610383 | 8.4:-5455869 | None:intergenic |
| CTACCTCTGTCAAAGAGTCA+AGG | 0.612948 | 8.4:+5456235 | MS.gene57938:CDS |
| ACACCTTGACTCTTTGACAG+AGG | 0.613904 | 8.4:-5456238 | None:intergenic |
| CATTGGCCAGCATACTCTCA+AGG | 0.616590 | 8.4:-5458081 | None:intergenic |
| GAGTATATTGTTTGTAGACA+AGG | 0.617239 | 8.4:+5457102 | MS.gene57938:CDS |
| GAGAGACCCAACTTGTCACA+TGG | 0.618405 | 8.4:-5457696 | None:intergenic |
| CTTTACACAGAAGCAACTGA+TGG | 0.620660 | 8.4:+5457962 | MS.gene57938:CDS |
| GGGTGTGAGCAAAGGTAAAG+TGG | 0.624595 | 8.4:+5458496 | MS.gene57938:intron |
| CTGAATCAAGCAAGGAGTAG+CGG | 0.626177 | 8.4:+5456877 | MS.gene57938:CDS |
| ACTTGGAGTGGAAAATGATG+AGG | 0.627192 | 8.4:+5457146 | MS.gene57938:CDS |
| GTTCGTGAAGAAATACTTAG+GGG | 0.627972 | 8.4:+5456481 | MS.gene57938:CDS |
| GGTAGCATGTAGTGAAACAA+AGG | 0.628237 | 8.4:-5456217 | None:intergenic |
| TTCGCCTTCACTCAGCGGGG+CGG | 0.628380 | 8.4:+5457209 | MS.gene57938:CDS |
| AGGATTCCGAGAAGCAATTG+CGG | 0.629661 | 8.4:+5457295 | MS.gene57938:CDS |
| GATGGCACCATGATGCCTCA+GGG | 0.629851 | 8.4:+5457549 | MS.gene57938:CDS |
| GCCAATCCGAGAGTCGTCCA+GGG | 0.630314 | 8.4:-5457896 | None:intergenic |
| GGTTGTTCGCCTTCACTCAG+CGG | 0.632472 | 8.4:+5457204 | MS.gene57938:CDS |
| TTGCATTGTGAATGCTGTGA+GGG | 0.638559 | 8.4:+5457056 | MS.gene57938:CDS |
| GAAACATCGTCAATGTTCCA+CGG | 0.640645 | 8.4:-5457243 | None:intergenic |
| CATGTTATCAGACTGCTGGA+AGG | 0.643775 | 8.4:+5458713 | MS.gene57938:CDS |
| GAGGGGAATGAGAAATTAAG+GGG | 0.646856 | 8.4:+5456832 | MS.gene57938:CDS |
| TTTGGTATCTCTGTAAGCAG+GGG | 0.647241 | 8.4:-5457502 | None:intergenic |
| CCATCAAGATTCTTCCTGTG+GGG | 0.659257 | 8.4:+5456644 | MS.gene57938:CDS |
| GCAAACACTTGTGATGTGGT+TGG | 0.661634 | 8.4:-5458635 | None:intergenic |
| GATCCTGTAGTAGTTAAAAG+GGG | 0.670223 | 8.4:+5458103 | MS.gene57938:CDS |
| CGTCCTCTGAAACAGCCAAG+AGG | 0.680303 | 8.4:+5456698 | MS.gene57938:CDS |
| GAAATGCAGGGTGTGAGCAA+AGG | 0.693831 | 8.4:+5458488 | MS.gene57938:intron |
| GCATGCAAACACTTGTGATG+TGG | 0.707983 | 8.4:-5458639 | None:intergenic |
| TTGGTGATGAAGGAAGTGAA+AGG | 0.728881 | 8.4:-5455901 | None:intergenic |
| GTTGCATTGTGAATGCTGTG+AGG | 0.729569 | 8.4:+5457055 | MS.gene57938:CDS |
| AAGAGCTTATATCAACCATG+AGG | 0.738943 | 8.4:+5458522 | MS.gene57938:CDS |
| GCTTTGTTAATTGATCCCTG+AGG | 0.743258 | 8.4:-5457564 | None:intergenic |
| CCGATTCGAGAAGACCCATG+TGG | 0.743893 | 8.4:-5456669 | None:intergenic |
| TTGTTCGCCTTCACTCAGCG+GGG | 0.757164 | 8.4:+5457206 | MS.gene57938:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTTTAATTTTCATACA+CGG | - | chr8.4:5458439-5458458 | None:intergenic | 15.0% |
| !!! | TTAAACTTTTTCTTTTGTAA+TGG | + | chr8.4:5458449-5458468 | MS.gene57938:intron | 15.0% |
| !! | AAAGAAGTTAATGACAAATA+TGG | + | chr8.4:5456943-5456962 | MS.gene57938:CDS | 20.0% |
| !! | ATATTTGTCATTAACTTCTT+TGG | - | chr8.4:5456944-5456963 | None:intergenic | 20.0% |
| !! | CGAATAATTAATCTTTCATT+TGG | - | chr8.4:5458220-5458239 | None:intergenic | 20.0% |
| !! | TTGGAAAATTAATGTAGAAA+AGG | + | chr8.4:5457931-5457950 | MS.gene57938:CDS | 20.0% |
| !!! | AAACTTTTCTAACAAAACTT+TGG | - | chr8.4:5456122-5456141 | None:intergenic | 20.0% |
| !!! | TAATTTTAGAATCATTGCTT+TGG | + | chr8.4:5457443-5457462 | MS.gene57938:CDS | 20.0% |
| !!! | TTACTTGTTGATTCATTTTA+TGG | + | chr8.4:5457835-5457854 | MS.gene57938:intron | 20.0% |
| ! | AAAAAACCCAATTTCACTTT+AGG | - | chr8.4:5456415-5456434 | None:intergenic | 25.0% |
| ! | AAATACTATTTGGATGATAC+TGG | + | chr8.4:5458689-5458708 | MS.gene57938:CDS | 25.0% |
| ! | AATTAATGTAGAAAAGGTGA+TGG | + | chr8.4:5457937-5457956 | MS.gene57938:CDS | 25.0% |
| ! | AATTGTTTGTATAAATGGTC+CGG | + | chr8.4:5456990-5457009 | MS.gene57938:CDS | 25.0% |
| ! | AGTTGAAGAAAGAATTTGAA+GGG | + | chr8.4:5456728-5456747 | MS.gene57938:CDS | 25.0% |
| ! | CATTATCTCAAGATATATGT+GGG | + | chr8.4:5457408-5457427 | MS.gene57938:CDS | 25.0% |
| ! | GTCAATTAGAATTAGAATGA+AGG | + | chr8.4:5458256-5458275 | MS.gene57938:intron | 25.0% |
| ! | TATTCGCTTTATGATTTCAT+TGG | + | chr8.4:5458234-5458253 | MS.gene57938:intron | 25.0% |
| ! | TTGTTTATTTATGATACCTG+AGG | - | chr8.4:5458151-5458170 | None:intergenic | 25.0% |
| !! | AACAATGAACACTGTATTTT+TGG | - | chr8.4:5457637-5457656 | None:intergenic | 25.0% |
| !! | ACAATGAACACTGTATTTTT+GGG | - | chr8.4:5457636-5457655 | None:intergenic | 25.0% |
| !! | ACTATCTTTTTCTTCAATGA+AGG | - | chr8.4:5457990-5458009 | None:intergenic | 25.0% |
| !! | ACTCACAATGATTTTTATCA+TGG | + | chr8.4:5456172-5456191 | MS.gene57938:CDS | 25.0% |
| !! | ATATATTTTCAGCTCAAAGA+CGG | + | chr8.4:5456013-5456032 | MS.gene57938:CDS | 25.0% |
| !! | TATTGGTTATAAACCAAGTA+GGG | + | chr8.4:5458664-5458683 | MS.gene57938:CDS | 25.0% |
| !!! | TTGTATTTTTGTGAAATGCA+GGG | + | chr8.4:5458476-5458495 | MS.gene57938:intron | 25.0% |
| AAAAAGATAGTGCAATGGTT+TGG | + | chr8.4:5457999-5458018 | MS.gene57938:CDS | 30.0% | |
| AAATAGTATTTAGCCCTACT+TGG | - | chr8.4:5458680-5458699 | None:intergenic | 30.0% | |
| AAATCATTGTGAGTTTCAGA+AGG | - | chr8.4:5456166-5456185 | None:intergenic | 30.0% | |
| AAGTAGGGCTAAATACTATT+TGG | + | chr8.4:5458679-5458698 | MS.gene57938:CDS | 30.0% | |
| AATACAGTGTTCATTGTTAG+TGG | + | chr8.4:5457639-5457658 | MS.gene57938:CDS | 30.0% | |
| AATATTGTCGTTGAAACTTC+TGG | - | chr8.4:5455877-5455896 | None:intergenic | 30.0% | |
| AATTAACAAAGCTCCTAGTT+TGG | + | chr8.4:5457575-5457594 | MS.gene57938:CDS | 30.0% | |
| AGACAAAGCTTCTTAAAACT+AGG | - | chr8.4:5457471-5457490 | None:intergenic | 30.0% | |
| AGGCCAATTGTTTGTATAAA+TGG | + | chr8.4:5456985-5457004 | MS.gene57938:CDS | 30.0% | |
| ATCCTGATGAAGATTATGTT+TGG | + | chr8.4:5456338-5456357 | MS.gene57938:CDS | 30.0% | |
| ATGATCCTGTAGTAGTTAAA+AGG | + | chr8.4:5458101-5458120 | MS.gene57938:CDS | 30.0% | |
| ATTCTTCGTTTACGAGAAAT+TGG | - | chr8.4:5455923-5455942 | None:intergenic | 30.0% | |
| CTACAAACAATATACTCGTA+AGG | - | chr8.4:5457099-5457118 | None:intergenic | 30.0% | |
| GAGTATATTGTTTGTAGACA+AGG | + | chr8.4:5457102-5457121 | MS.gene57938:CDS | 30.0% | |
| GAGTTGAAGAAAGAATTTGA+AGG | + | chr8.4:5456727-5456746 | MS.gene57938:CDS | 30.0% | |
| GCATTATCTCAAGATATATG+TGG | + | chr8.4:5457407-5457426 | MS.gene57938:CDS | 30.0% | |
| GGACCATTTATACAAACAAT+TGG | - | chr8.4:5456991-5457010 | None:intergenic | 30.0% | |
| GGTTCATGATTATCATCTAA+TGG | + | chr8.4:5456360-5456379 | MS.gene57938:CDS | 30.0% | |
| GTTTCAGAAGGTAAAAAAGT+TGG | - | chr8.4:5456154-5456173 | None:intergenic | 30.0% | |
| GTTTCTGTAAGCATTATCTT+TGG | + | chr8.4:5456194-5456213 | MS.gene57938:CDS | 30.0% | |
| TAAATCCTGATCAAAACTCT+TGG | - | chr8.4:5457370-5457389 | None:intergenic | 30.0% | |
| TATTGTTGAAGTAAAACCTC+AGG | + | chr8.4:5458132-5458151 | MS.gene57938:CDS | 30.0% | |
| TCCTGATGAAGATTATGTTT+GGG | + | chr8.4:5456339-5456358 | MS.gene57938:CDS | 30.0% | |
| TCCTTGAAAAAACTCAAGAA+AGG | - | chr8.4:5458315-5458334 | None:intergenic | 30.0% | |
| TGAAGAAAAAGATAGTGCAA+TGG | + | chr8.4:5457994-5458013 | MS.gene57938:CDS | 30.0% | |
| TGATCCTGTAGTAGTTAAAA+GGG | + | chr8.4:5458102-5458121 | MS.gene57938:CDS | 30.0% | |
| TGTTCGTGAAGAAATACTTA+GGG | + | chr8.4:5456480-5456499 | MS.gene57938:CDS | 30.0% | |
| TTGGATTATGAGTCTAAAAG+AGG | + | chr8.4:5456586-5456605 | MS.gene57938:CDS | 30.0% | |
| TTGTGACTTGAAATTCGAAT+GGG | + | chr8.4:5455979-5455998 | MS.gene57938:CDS | 30.0% | |
| TTGTTGAACTGTGATTTGAT+TGG | + | chr8.4:5456505-5456524 | MS.gene57938:CDS | 30.0% | |
| TTTAACTACTACAGGATCAT+TGG | - | chr8.4:5458101-5458120 | None:intergenic | 30.0% | |
| ! | AAATATGGTGATGAACAATC+TGG | + | chr8.4:5456958-5456977 | MS.gene57938:CDS | 30.0% |
| ! | AATATGGTGATGAACAATCT+GGG | + | chr8.4:5456959-5456978 | MS.gene57938:CDS | 30.0% |
| ! | ACGTTTTCCTAAAGTGAAAT+TGG | + | chr8.4:5456405-5456424 | MS.gene57938:CDS | 30.0% |
| ! | CGTTTTCCTAAAGTGAAATT+GGG | + | chr8.4:5456406-5456425 | MS.gene57938:CDS | 30.0% |
| ! | CTATTGGTTATAAACCAAGT+AGG | + | chr8.4:5458663-5458682 | MS.gene57938:CDS | 30.0% |
| ! | TTGGATTTGTTCAAAGGTAT+TGG | + | chr8.4:5456778-5456797 | MS.gene57938:CDS | 30.0% |
| !! | ATCATTGTTTCTGAGTTCAT+TGG | + | chr8.4:5457183-5457202 | MS.gene57938:CDS | 30.0% |
| !! | CTTGTATTTTTGTGAAATGC+AGG | + | chr8.4:5458475-5458494 | MS.gene57938:intron | 30.0% |
| !! | TACATTGGTGTTGATTACTT+TGG | + | chr8.4:5456610-5456629 | MS.gene57938:CDS | 30.0% |
| !! | TGGATTTGTTCAAAGGTATT+GGG | + | chr8.4:5456779-5456798 | MS.gene57938:CDS | 30.0% |
| !! | TTTGGCATTGAAGAATCTTT+TGG | + | chr8.4:5456810-5456829 | MS.gene57938:CDS | 30.0% |
| !!! | ATTTTTTGTCTTGTTGTAGC+AGG | + | chr8.4:5456554-5456573 | MS.gene57938:CDS | 30.0% |
| !!! | GATTCTGAAATCTTTTACGT+TGG | + | chr8.4:5456046-5456065 | MS.gene57938:CDS | 30.0% |
| !!! | TCCTTTCTTGAGTTTTTTCA+AGG | + | chr8.4:5458311-5458330 | MS.gene57938:intron | 30.0% |
| AAACGTTTCCTCAAGTAAGT+TGG | - | chr8.4:5456391-5456410 | None:intergenic | 35.0% | |
| AAGAGCTTATATCAACCATG+AGG | + | chr8.4:5458522-5458541 | MS.gene57938:CDS | 35.0% | |
| ACCCAAACATAATCTTCATC+AGG | - | chr8.4:5456343-5456362 | None:intergenic | 35.0% | |
| AGAGAGATAACATCCAAACT+AGG | - | chr8.4:5457591-5457610 | None:intergenic | 35.0% | |
| CCTAGACATAGAAGAAAATC+TGG | - | chr8.4:5458563-5458582 | None:intergenic | 35.0% | |
| CTAAGTATTTCTTCACGAAC+AGG | - | chr8.4:5456481-5456500 | None:intergenic | 35.0% | |
| CTCAAGATATATGTGGGATT+AGG | + | chr8.4:5457414-5457433 | MS.gene57938:CDS | 35.0% | |
| CTGTTCGTGAAGAAATACTT+AGG | + | chr8.4:5456479-5456498 | MS.gene57938:CDS | 35.0% | |
| CTTACAGAGATACCAAAAAC+AGG | + | chr8.4:5457508-5457527 | MS.gene57938:CDS | 35.0% | |
| CTTGTGACTTGAAATTCGAA+TGG | + | chr8.4:5455978-5455997 | MS.gene57938:CDS | 35.0% | |
| GAACTCAGCAATCAAAATGA+AGG | + | chr8.4:5457275-5457294 | MS.gene57938:CDS | 35.0% | |
| GAAGAAAGAATTTGAAGGGA+AGG | + | chr8.4:5456732-5456751 | MS.gene57938:CDS | 35.0% | |
| GAGTCTAAAAGAGGTTACAT+TGG | + | chr8.4:5456595-5456614 | MS.gene57938:CDS | 35.0% | |
| GATCCTGTAGTAGTTAAAAG+GGG | + | chr8.4:5458103-5458122 | MS.gene57938:CDS | 35.0% | |
| GTTCGTGAAGAAATACTTAG+GGG | + | chr8.4:5456481-5456500 | MS.gene57938:CDS | 35.0% | |
| GTTGAATTGGACAAATCACT+TGG | + | chr8.4:5457129-5457148 | MS.gene57938:CDS | 35.0% | |
| TATATCAACCATGAGGAATG+AGG | + | chr8.4:5458529-5458548 | MS.gene57938:CDS | 35.0% | |
| TCATCAATGTTGCATGATCT+CGG | + | chr8.4:5457804-5457823 | MS.gene57938:intron | 35.0% | |
| TGCGTTTCAATTCTTCTCAT+TGG | + | chr8.4:5456260-5456279 | MS.gene57938:CDS | 35.0% | |
| TTCAGATTCTGAATCAAGCA+AGG | + | chr8.4:5456869-5456888 | MS.gene57938:CDS | 35.0% | |
| ! | CAAAAGGATCAACCTGTTTT+TGG | - | chr8.4:5457523-5457542 | None:intergenic | 35.0% |
| ! | CCAGATTTTCTTCTATGTCT+AGG | + | chr8.4:5458560-5458579 | MS.gene57938:CDS | 35.0% |
| ! | GATGACTTGGATTTGTTCAA+AGG | + | chr8.4:5456772-5456791 | MS.gene57938:CDS | 35.0% |
| ! | GCATTGAAGAATCTTTTGGA+GGG | + | chr8.4:5456814-5456833 | MS.gene57938:CDS | 35.0% |
| ! | TTGATCCTTTTGGACTATGA+TGG | + | chr8.4:5457531-5457550 | MS.gene57938:CDS | 35.0% |
| ! | TTTTCTCCATGTGACAAGTT+GGG | + | chr8.4:5457690-5457709 | MS.gene57938:CDS | 35.0% |
| ! | TTTTGGTATCTCTGTAAGCA+GGG | - | chr8.4:5457506-5457525 | None:intergenic | 35.0% |
| !! | ATGGATTCCTTTTTGACTGA+TGG | + | chr8.4:5457854-5457873 | MS.gene57938:intron | 35.0% |
| !! | CATTGAAGAATCTTTTGGAG+GGG | + | chr8.4:5456815-5456834 | MS.gene57938:CDS | 35.0% |
| !! | GATTGGCATCAGATTTTGAT+TGG | + | chr8.4:5457912-5457931 | MS.gene57938:CDS | 35.0% |
| !! | GTTCTGTAGATTTCTGAAGT+AGG | - | chr8.4:5456454-5456473 | None:intergenic | 35.0% |
| !! | TAGACAAGGAAGTGTTGAAT+TGG | + | chr8.4:5457116-5457135 | MS.gene57938:CDS | 35.0% |
| !! | TGGTTTTACCAACTTACTTG+AGG | + | chr8.4:5456380-5456399 | MS.gene57938:CDS | 35.0% |
| !! | TTACGAGAAATTGGTGATGA+AGG | - | chr8.4:5455914-5455933 | None:intergenic | 35.0% |
| !! | TTTTTGGTATCTCTGTAAGC+AGG | - | chr8.4:5457507-5457526 | None:intergenic | 35.0% |
| !!! | AGGTATTGGGTTGAAGTTTT+TGG | + | chr8.4:5456792-5456811 | MS.gene57938:CDS | 35.0% |
| !!! | ATTTTTGGGATCACTGCATA+AGG | - | chr8.4:5457622-5457641 | None:intergenic | 35.0% |
| !!! | CAAAAACAGGTTGATCCTTT+TGG | + | chr8.4:5457521-5457540 | MS.gene57938:CDS | 35.0% |
| ACCATCAAGATTCTTCCTGT+GGG | + | chr8.4:5456643-5456662 | MS.gene57938:CDS | 40.0% | |
| ACTTGGAGTGGAAAATGATG+AGG | + | chr8.4:5457146-5457165 | MS.gene57938:CDS | 40.0% | |
| AGGATTTAGAGAGAGCTTGT+AGG | + | chr8.4:5457382-5457401 | MS.gene57938:CDS | 40.0% | |
| AGTGTTCATTGTTAGTGGCA+GGG | + | chr8.4:5457644-5457663 | MS.gene57938:CDS | 40.0% | |
| ATTAAGGGGTGAAGTTGTGT+TGG | + | chr8.4:5456846-5456865 | MS.gene57938:CDS | 40.0% | |
| ATTGGACAAATCACTTGGAG+TGG | + | chr8.4:5457134-5457153 | MS.gene57938:CDS | 40.0% | |
| CAAGTGTTTGCATGCACTAT+TGG | + | chr8.4:5458647-5458666 | MS.gene57938:CDS | 40.0% | |
| CAATAGAATCTTTGCCGACA+AGG | + | chr8.4:5456300-5456319 | MS.gene57938:CDS | 40.0% | |
| CAATCTCAAACTTCACATCC+TGG | - | chr8.4:5456912-5456931 | None:intergenic | 40.0% | |
| CAGAACATGGTTACTTCACA+AGG | + | chr8.4:5457721-5457740 | MS.gene57938:CDS | 40.0% | |
| CTCTCATGATGTAGCGTATT+GGG | + | chr8.4:5457344-5457363 | MS.gene57938:CDS | 40.0% | |
| CTTGTCGGCAAAGATTCTAT+TGG | - | chr8.4:5456302-5456321 | None:intergenic | 40.0% | |
| CTTTACACAGAAGCAACTGA+TGG | + | chr8.4:5457962-5457981 | MS.gene57938:CDS | 40.0% | |
| GAAACATCGTCAATGTTCCA+CGG | - | chr8.4:5457246-5457265 | None:intergenic | 40.0% | |
| GAGGGGAATGAGAAATTAAG+GGG | + | chr8.4:5456832-5456851 | MS.gene57938:CDS | 40.0% | |
| GGAGGGGAATGAGAAATTAA+GGG | + | chr8.4:5456831-5456850 | MS.gene57938:CDS | 40.0% | |
| GGATTTAGAGAGAGCTTGTA+GGG | + | chr8.4:5457383-5457402 | MS.gene57938:CDS | 40.0% | |
| GGTAGCATGTAGTGAAACAA+AGG | - | chr8.4:5456220-5456239 | None:intergenic | 40.0% | |
| GTGATGAACAATCTGGGTAT+AGG | + | chr8.4:5456965-5456984 | MS.gene57938:CDS | 40.0% | |
| TACCATCAAGATTCTTCCTG+TGG | + | chr8.4:5456642-5456661 | MS.gene57938:CDS | 40.0% | |
| TGATGAAGGAAGTGAAAGGT+TGG | - | chr8.4:5455900-5455919 | None:intergenic | 40.0% | |
| TGGAGGGGAATGAGAAATTA+AGG | + | chr8.4:5456830-5456849 | MS.gene57938:CDS | 40.0% | |
| TTGCATTGTGAATGCTGTGA+GGG | + | chr8.4:5457056-5457075 | MS.gene57938:CDS | 40.0% | |
| TTTGGTATCTCTGTAAGCAG+GGG | - | chr8.4:5457505-5457524 | None:intergenic | 40.0% | |
| ! | CAAGAAGCAGATCCTGATTT+TGG | + | chr8.4:5458028-5458047 | MS.gene57938:CDS | 40.0% |
| ! | GCAACTTCTTCTTGTTGTGA+TGG | - | chr8.4:5456100-5456119 | None:intergenic | 40.0% |
| ! | GCTTTGTTAATTGATCCCTG+AGG | - | chr8.4:5457567-5457586 | None:intergenic | 40.0% |
| ! | GTTTTCTCCATGTGACAAGT+TGG | + | chr8.4:5457689-5457708 | MS.gene57938:CDS | 40.0% |
| ! | TCTTGTTGTAGCAGGATGTT+GGG | + | chr8.4:5456562-5456581 | MS.gene57938:CDS | 40.0% |
| ! | TGTCGTTGAAACTTCTGGAA+CGG | - | chr8.4:5455872-5455891 | None:intergenic | 40.0% |
| !! | AAGGGAAGGTTCTGATTTTG+GGG | + | chr8.4:5456746-5456765 | MS.gene57938:CDS | 40.0% |
| !! | ATTCCTTTTTGACTGATGGC+AGG | + | chr8.4:5457858-5457877 | MS.gene57938:intron | 40.0% |
| !! | CGTTGGTTCGTTAAAATCAC+AGG | + | chr8.4:5456063-5456082 | MS.gene57938:CDS | 40.0% |
| !! | GAAGGGAAGGTTCTGATTTT+GGG | + | chr8.4:5456745-5456764 | MS.gene57938:CDS | 40.0% |
| !! | GGCATTGAAGAATCTTTTGG+AGG | + | chr8.4:5456813-5456832 | MS.gene57938:CDS | 40.0% |
| !! | TCATTGGCTTGCATACAAGA+AGG | + | chr8.4:5456276-5456295 | MS.gene57938:CDS | 40.0% |
| !! | TGAAGGGAAGGTTCTGATTT+TGG | + | chr8.4:5456744-5456763 | MS.gene57938:CDS | 40.0% |
| !! | TGTCCCCTTTTAACTACTAC+AGG | - | chr8.4:5458109-5458128 | None:intergenic | 40.0% |
| !! | TTGGTGATGAAGGAAGTGAA+AGG | - | chr8.4:5455904-5455923 | None:intergenic | 40.0% |
| ACACCTTGACTCTTTGACAG+AGG | - | chr8.4:5456241-5456260 | None:intergenic | 45.0% | |
| AGGATTCCGAGAAGCAATTG+CGG | + | chr8.4:5457295-5457314 | MS.gene57938:CDS | 45.0% | |
| ATGGAGAAAACCAGTCGCTA+AGG | - | chr8.4:5457680-5457699 | None:intergenic | 45.0% | |
| ATTGTGAATGCTGTGAGGGA+TGG | + | chr8.4:5457060-5457079 | MS.gene57938:CDS | 45.0% | |
| CAGTGTTCATTGTTAGTGGC+AGG | + | chr8.4:5457643-5457662 | MS.gene57938:CDS | 45.0% | |
| CATGTTATCAGACTGCTGGA+AGG | + | chr8.4:5458713-5458732 | MS.gene57938:CDS | 45.0% | |
| CCATCAAGATTCTTCCTGTG+GGG | + | chr8.4:5456644-5456663 | MS.gene57938:CDS | 45.0% | |
| CTACCTCTGTCAAAGAGTCA+AGG | + | chr8.4:5456235-5456254 | MS.gene57938:CDS | 45.0% | |
| CTGAATCAAGCAAGGAGTAG+CGG | + | chr8.4:5456877-5456896 | MS.gene57938:CDS | 45.0% | |
| CTTCAACTCTTTCACCCTCT+TGG | - | chr8.4:5456716-5456735 | None:intergenic | 45.0% | |
| GCAAACACTTGTGATGTGGT+TGG | - | chr8.4:5458638-5458657 | None:intergenic | 45.0% | |
| GCATGCAAACACTTGTGATG+TGG | - | chr8.4:5458642-5458661 | None:intergenic | 45.0% | |
| GCTCTCATGATGTAGCGTAT+TGG | + | chr8.4:5457343-5457362 | MS.gene57938:CDS | 45.0% | |
| GTGTTCATTGTTAGTGGCAG+GGG | + | chr8.4:5457645-5457664 | MS.gene57938:CDS | 45.0% | |
| GTTGCATTGTGAATGCTGTG+AGG | + | chr8.4:5457055-5457074 | MS.gene57938:CDS | 45.0% | |
| TGACTTCTCCTCATTCCTCA+TGG | - | chr8.4:5458540-5458559 | None:intergenic | 45.0% | |
| TGGTCATGTTATCAGACTGC+TGG | + | chr8.4:5458709-5458728 | MS.gene57938:CDS | 45.0% | |
| TGTGAGCAAAGGTAAAGTGG+TGG | + | chr8.4:5458499-5458518 | MS.gene57938:CDS | 45.0% | |
| TTGTAGCAGGATGTTGGGTT+TGG | + | chr8.4:5456567-5456586 | MS.gene57938:CDS | 45.0% | |
| TTGTGAATGCTGTGAGGGAT+GGG | + | chr8.4:5457061-5457080 | MS.gene57938:CDS | 45.0% | |
| ! | AAGTCACAAGAAGCGCGTAT+TGG | - | chr8.4:5455968-5455987 | None:intergenic | 45.0% |
| ! | AATTGATCCCTGAGGCATCA+TGG | - | chr8.4:5457559-5457578 | None:intergenic | 45.0% |
| ! | CACTTGTGATGTGGTTGGTA+AGG | - | chr8.4:5458633-5458652 | None:intergenic | 45.0% |
| ! | CAGATCCTGATTTTGGACTG+TGG | + | chr8.4:5458035-5458054 | MS.gene57938:CDS | 45.0% |
| ! | GAGTAGCGGAAAAGATATCC+AGG | + | chr8.4:5456891-5456910 | MS.gene57938:CDS | 45.0% |
| ! | GTCTTGTTGTAGCAGGATGT+TGG | + | chr8.4:5456561-5456580 | MS.gene57938:CDS | 45.0% |
| ! | TGTTCACCTTGAGAGTATGC+TGG | + | chr8.4:5458075-5458094 | MS.gene57938:CDS | 45.0% |
| !! | AGGGAAGGTTCTGATTTTGG+GGG | + | chr8.4:5456747-5456766 | MS.gene57938:CDS | 45.0% |
| !! | TGGTGCCATCATAGTCCAAA+AGG | - | chr8.4:5457539-5457558 | None:intergenic | 45.0% |
| !! | TTGGGCCAAGAGTTTTGATC+AGG | + | chr8.4:5457362-5457381 | MS.gene57938:CDS | 45.0% |
| !!! | GATTTTGGGGGTTGATGACT+TGG | + | chr8.4:5456759-5456778 | MS.gene57938:CDS | 45.0% |
| AAATGGTCCGGTTTCGACTC+AGG | + | chr8.4:5457002-5457021 | MS.gene57938:CDS | 50.0% | |
| CAAAACCTCGCGAACCTTGT+CGG | - | chr8.4:5456317-5456336 | None:intergenic | 50.0% | |
| CATTGGCCAGCATACTCTCA+AGG | - | chr8.4:5458084-5458103 | None:intergenic | 50.0% | |
| CCACATGGGTCTTCTCGAAT+CGG | + | chr8.4:5456669-5456688 | MS.gene57938:CDS | 50.0% | |
| CCACCTGCCATCAGTCAAAA+AGG | - | chr8.4:5457864-5457883 | None:intergenic | 50.0% | |
| CCCCACAGGAAGAATCTTGA+TGG | - | chr8.4:5456647-5456666 | None:intergenic | 50.0% | |
| CTTGTGCCGCAATTGCTTCT+CGG | - | chr8.4:5457304-5457323 | None:intergenic | 50.0% | |
| GAAATGCAGGGTGTGAGCAA+AGG | + | chr8.4:5458488-5458507 | MS.gene57938:intron | 50.0% | |
| GAGAGACCCAACTTGTCACA+TGG | - | chr8.4:5457699-5457718 | None:intergenic | 50.0% | |
| GCTTGCCACAGTCCAAAATC+AGG | - | chr8.4:5458043-5458062 | None:intergenic | 50.0% | |
| GGGTGTGAGCAAAGGTAAAG+TGG | + | chr8.4:5458496-5458515 | MS.gene57938:intron | 50.0% | |
| GTAGAGTTTGCCTTAGCGAC+TGG | + | chr8.4:5457667-5457686 | MS.gene57938:CDS | 50.0% | |
| TTGGGTCTCTCTGCAGAACA+TGG | + | chr8.4:5457708-5457727 | MS.gene57938:CDS | 50.0% | |
| !! | CCTTTTTGACTGATGGCAGG+TGG | + | chr8.4:5457861-5457880 | MS.gene57938:intron | 50.0% |
| !! | GTCCTCTGAAACAGCCAAGA+GGG | + | chr8.4:5456699-5456718 | MS.gene57938:CDS | 50.0% |
| CTTCCTGTGGGGATCCACAT+GGG | + | chr8.4:5456655-5456674 | MS.gene57938:CDS | 55.0% | |
| GACTGATGGCAGGTGGAGTA+AGG | + | chr8.4:5457868-5457887 | MS.gene57938:intron | 55.0% | |
| GATGGCACCATGATGCCTCA+GGG | + | chr8.4:5457549-5457568 | MS.gene57938:CDS | 55.0% | |
| GATTCTCCCTGGACGACTCT+CGG | + | chr8.4:5457890-5457909 | MS.gene57938:CDS | 55.0% | |
| GCCTTCTCCTGAGTCGAAAC+CGG | - | chr8.4:5457012-5457031 | None:intergenic | 55.0% | |
| GGTGGAGTAAGGATTCTCCC+TGG | + | chr8.4:5457879-5457898 | MS.gene57938:intron | 55.0% | |
| GGTTGTTCGCCTTCACTCAG+CGG | + | chr8.4:5457204-5457223 | MS.gene57938:CDS | 55.0% | |
| GTTGTTCGCCTTCACTCAGC+GGG | + | chr8.4:5457205-5457224 | MS.gene57938:CDS | 55.0% | |
| TCCGGTTTCGACTCAGGAGA+AGG | + | chr8.4:5457008-5457027 | MS.gene57938:CDS | 55.0% | |
| TCTTCCTGTGGGGATCCACA+TGG | + | chr8.4:5456654-5456673 | MS.gene57938:CDS | 55.0% | |
| TGATGGCACCATGATGCCTC+AGG | + | chr8.4:5457548-5457567 | MS.gene57938:CDS | 55.0% | |
| TTGTTCGCCTTCACTCAGCG+GGG | + | chr8.4:5457206-5457225 | MS.gene57938:CDS | 55.0% | |
| ! | CACCCTCTTGGCTGTTTCAG+AGG | - | chr8.4:5456704-5456723 | None:intergenic | 55.0% |
| ! | CCGATTCGAGAAGACCCATG+TGG | - | chr8.4:5456672-5456691 | None:intergenic | 55.0% |
| !! | CGTCCTCTGAAACAGCCAAG+AGG | + | chr8.4:5456698-5456717 | MS.gene57938:CDS | 55.0% |
| AGACCCATGTGGATCCCCAC+AGG | - | chr8.4:5456661-5456680 | None:intergenic | 60.0% | |
| CTTTGCCGACAAGGTTCGCG+AGG | + | chr8.4:5456309-5456328 | MS.gene57938:CDS | 60.0% | |
| GCCAATCCGAGAGTCGTCCA+GGG | - | chr8.4:5457899-5457918 | None:intergenic | 60.0% | |
| TCCCTGGACGACTCTCGGAT+TGG | + | chr8.4:5457895-5457914 | MS.gene57938:CDS | 60.0% | |
| TGCCAATCCGAGAGTCGTCC+AGG | - | chr8.4:5457900-5457919 | None:intergenic | 60.0% | |
| CTTCACTCAGCGGGGCGGTT+CGG | + | chr8.4:5457214-5457233 | MS.gene57938:CDS | 65.0% | |
| TTCACTCAGCGGGGCGGTTC+GGG | + | chr8.4:5457215-5457234 | MS.gene57938:CDS | 65.0% | |
| TTCGCCTTCACTCAGCGGGG+CGG | + | chr8.4:5457209-5457228 | MS.gene57938:CDS | 65.0% | |
| CGAACCGCCCCGCTGAGTGA+AGG | - | chr8.4:5457216-5457235 | None:intergenic | 70.0% | |
| ! | GGGCGGTTCGGGTGAATCCG+TGG | + | chr8.4:5457226-5457245 | MS.gene57938:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 5455863 | 5458775 | 5455863 | ID=MS.gene57938 |
| chr8.4 | mRNA | 5455863 | 5458775 | 5455863 | ID=MS.gene57938.t1;Parent=MS.gene57938 |
| chr8.4 | exon | 5455863 | 5457742 | 5455863 | ID=MS.gene57938.t1.exon1;Parent=MS.gene57938.t1 |
| chr8.4 | CDS | 5455863 | 5457742 | 5455863 | ID=cds.MS.gene57938.t1;Parent=MS.gene57938.t1 |
| chr8.4 | exon | 5457880 | 5458153 | 5457880 | ID=MS.gene57938.t1.exon2;Parent=MS.gene57938.t1 |
| chr8.4 | CDS | 5457880 | 5458153 | 5457880 | ID=cds.MS.gene57938.t1;Parent=MS.gene57938.t1 |
| chr8.4 | exon | 5458497 | 5458775 | 5458497 | ID=MS.gene57938.t1.exon3;Parent=MS.gene57938.t1 |
| chr8.4 | CDS | 5458497 | 5458775 | 5458497 | ID=cds.MS.gene57938.t1;Parent=MS.gene57938.t1 |
| Gene Sequence |
| Protein sequence |
