Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031018.t1 | XP_013450962.1 | 96.3 | 458 | 17 | 0 | 1 | 458 | 1 | 458 | 8.60E-213 | 749.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031018.t1 | Q9LU10 | 67.8 | 410 | 130 | 2 | 50 | 458 | 40 | 448 | 1.7e-137 | 490.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031018.t1 | A0A072U5Q9 | 96.3 | 458 | 17 | 0 | 1 | 458 | 1 | 458 | 6.2e-213 | 749.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene24365 | MS.gene031018 | PPI |
| MS.gene031018 | MS.gene67091 | PPI |
| MS.gene013003 | MS.gene031018 | PPI |
| MS.gene031018 | MS.gene013259 | PPI |
| MS.gene031018 | MS.gene06344 | PPI |
| MS.gene031018 | MS.gene044005 | PPI |
| MS.gene049230 | MS.gene031018 | PPI |
| MS.gene031018 | MS.gene67151 | PPI |
| MS.gene031018 | MS.gene78401 | PPI |
| MS.gene31111 | MS.gene031018 | PPI |
| MS.gene031018 | MS.gene73119 | PPI |
| MS.gene031018 | MS.gene062762 | PPI |
| MS.gene064542 | MS.gene031018 | PPI |
| MS.gene031018 | MS.gene48483 | PPI |
| MS.gene031018 | MS.gene054624 | PPI |
| MS.gene031018 | MS.gene044004 | PPI |
| MS.gene031018 | MS.gene40946 | PPI |
| MS.gene035805 | MS.gene031018 | PPI |
| MS.gene052072 | MS.gene031018 | PPI |
| MS.gene45537 | MS.gene031018 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031018.t1 | MTR_6g011810 | 96.288 | 458 | 17 | 0 | 1 | 458 | 1 | 458 | 0.0 | 892 |
| MS.gene031018.t1 | MTR_6g007030 | 50.760 | 329 | 147 | 5 | 130 | 457 | 115 | 429 | 3.56e-96 | 296 |
| MS.gene031018.t1 | MTR_2g019140 | 48.069 | 233 | 109 | 4 | 128 | 350 | 88 | 318 | 6.04e-58 | 194 |
| MS.gene031018.t1 | MTR_7g113170 | 28.247 | 308 | 183 | 10 | 165 | 458 | 147 | 430 | 8.22e-30 | 120 |
| MS.gene031018.t1 | MTR_2g019140 | 43.506 | 154 | 77 | 3 | 128 | 273 | 88 | 239 | 7.98e-29 | 114 |
| MS.gene031018.t1 | MTR_7g113170 | 29.224 | 219 | 137 | 7 | 165 | 377 | 147 | 353 | 6.29e-22 | 97.4 |
| MS.gene031018.t1 | MTR_1g088980 | 34.091 | 132 | 78 | 6 | 224 | 351 | 177 | 303 | 4.35e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031018.t1 | AT5G39830 | 75.366 | 410 | 99 | 2 | 50 | 458 | 40 | 448 | 0.0 | 617 |
| MS.gene031018.t1 | AT5G39830 | 71.951 | 410 | 99 | 3 | 50 | 458 | 40 | 434 | 0.0 | 580 |
| MS.gene031018.t1 | AT3G27925 | 47.978 | 371 | 176 | 7 | 88 | 456 | 80 | 435 | 1.69e-95 | 295 |
| MS.gene031018.t1 | AT3G27925 | 47.978 | 371 | 176 | 7 | 88 | 456 | 80 | 435 | 1.69e-95 | 295 |
| MS.gene031018.t1 | AT4G18370 | 46.154 | 234 | 116 | 4 | 128 | 354 | 90 | 320 | 1.61e-54 | 185 |
| MS.gene031018.t1 | AT4G18370 | 42.697 | 178 | 94 | 3 | 128 | 300 | 90 | 264 | 3.22e-34 | 129 |
| MS.gene031018.t1 | AT5G27660 | 31.270 | 307 | 170 | 12 | 165 | 455 | 149 | 430 | 4.09e-34 | 133 |
| MS.gene031018.t1 | AT5G27660 | 30.945 | 307 | 165 | 13 | 165 | 455 | 144 | 419 | 2.44e-31 | 125 |
| MS.gene031018.t1 | AT4G18370 | 40.268 | 149 | 81 | 3 | 128 | 271 | 90 | 235 | 6.03e-25 | 103 |
Find 117 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCGAAAGGAAGCTTAAT+TGG | 0.172968 | 6.2:-6134121 | MS.gene031018:CDS |
| CATTGGAGCTGATCGTTTAA+AGG | 0.210417 | 6.2:-6135245 | MS.gene031018:CDS |
| ATTGGCTTTAAAATATCTTT+AGG | 0.215785 | 6.2:+6134779 | None:intergenic |
| TAACCTGTTTCCGGGATTTA+TGG | 0.234561 | 6.2:+6134589 | None:intergenic |
| TCCAACAAGACGCGTGTTAA+TGG | 0.241746 | 6.2:-6137226 | MS.gene031018:CDS |
| ATCTTAGTGTAACCTGTTTC+CGG | 0.248549 | 6.2:+6134580 | None:intergenic |
| ATTCCTGTTTCTGTTCTTCA+AGG | 0.323430 | 6.2:-6137188 | MS.gene031018:CDS |
| CGAGATATCTTTAGTAAAAC+TGG | 0.325407 | 6.2:-6134647 | MS.gene031018:CDS |
| TTGGCTTTAAAATATCTTTA+GGG | 0.326517 | 6.2:+6134780 | None:intergenic |
| GCCATTAACACGCGTCTTGT+TGG | 0.328725 | 6.2:+6137225 | None:intergenic |
| CCCACTGCAAGAGGCTTTGC+TGG | 0.333571 | 6.2:-6133398 | MS.gene031018:CDS |
| AGGAGAGTTGTTGAAGGTAT+TGG | 0.338372 | 6.2:-6132884 | MS.gene031018:CDS |
| TACCTTGTTGAAATGGAAAT+AGG | 0.351548 | 6.2:+6138694 | None:intergenic |
| GTTCCTCAGTTGATTCAGTT+TGG | 0.355755 | 6.2:-6133800 | MS.gene031018:CDS |
| ACTCCAGAGCCATTTCCTTC+AGG | 0.357026 | 6.2:+6135668 | None:intergenic |
| CAAGATGAAACTCAGGATTC+TGG | 0.366678 | 6.2:-6137276 | MS.gene031018:CDS |
| CTCACAGTTGGCGTTATTAG+TGG | 0.371808 | 6.2:-6134677 | MS.gene031018:CDS |
| AGTTGATTTGCAATCAAGTC+TGG | 0.378170 | 6.2:+6133590 | None:intergenic |
| TCTTAGTGTAACCTGTTTCC+GGG | 0.378528 | 6.2:+6134581 | None:intergenic |
| GAAAGTCGGGCAGCAATGTT+TGG | 0.395952 | 6.2:-6134732 | MS.gene031018:CDS |
| AAATGGCTCTGGAGTAGTTT+GGG | 0.399205 | 6.2:-6135660 | MS.gene031018:CDS |
| AGAAGAGTACCTTGTTGAAA+TGG | 0.401114 | 6.2:+6138687 | None:intergenic |
| AGTAAAACTGGTGTAACAAT+TGG | 0.401310 | 6.2:-6134635 | MS.gene031018:CDS |
| GAAATGGCTCTGGAGTAGTT+TGG | 0.404625 | 6.2:-6135661 | MS.gene031018:CDS |
| AGTAACATTGTTGATTCAAA+GGG | 0.406116 | 6.2:-6132839 | MS.gene031018:CDS |
| TTTCAAACAGTTGGACAATT+CGG | 0.406451 | 6.2:+6135902 | None:intergenic |
| AAATGGAGCTCTTATTCTTA+CGG | 0.419734 | 6.2:-6133558 | MS.gene031018:intron |
| TGTTCTTCAAGGTACTTGTC+AGG | 0.419796 | 6.2:-6137177 | MS.gene031018:intron |
| CAATTTAAGGTTGTTAGAGC+TGG | 0.421502 | 6.2:-6133632 | MS.gene031018:intron |
| CGGCAGATTCCTGAAGGAAA+TGG | 0.428251 | 6.2:-6135677 | MS.gene031018:intron |
| TTGGCCATTGGAAATCCATT+TGG | 0.428255 | 6.2:-6134713 | MS.gene031018:CDS |
| CACACCAGTCACATTAAGTT+GGG | 0.434340 | 6.2:+6135834 | None:intergenic |
| AATCAACTTAACGTTCGAAA+TGG | 0.442751 | 6.2:-6133575 | MS.gene031018:CDS |
| ATTCGAAAGGAAGCTTAATT+GGG | 0.445307 | 6.2:-6134120 | MS.gene031018:CDS |
| CAGCCATAAATCCCGGAAAC+AGG | 0.448059 | 6.2:-6134592 | MS.gene031018:intron |
| CAACAACCTGACCGGAGCTT+GGG | 0.451758 | 6.2:+6135397 | None:intergenic |
| GCAACAACCTGACCGGAGCT+TGG | 0.459811 | 6.2:+6135396 | None:intergenic |
| GTACCTTGAAGAACAGAAAC+AGG | 0.463625 | 6.2:+6137185 | None:intergenic |
| GAGAAACCCAAGCTCCGGTC+AGG | 0.473866 | 6.2:-6135403 | MS.gene031018:CDS |
| AGGATTCTGGTAACATGATA+AGG | 0.478607 | 6.2:-6137263 | MS.gene031018:CDS |
| AAAGGATCTAGCTGTCTTGA+AGG | 0.481432 | 6.2:-6135227 | MS.gene031018:intron |
| ATTCCTGAAGGAAATGGCTC+TGG | 0.481629 | 6.2:-6135671 | MS.gene031018:CDS |
| CCACACCAGTCACATTAAGT+TGG | 0.482101 | 6.2:+6135833 | None:intergenic |
| GGTATTGCAGGAACTTCAGC+TGG | 0.482116 | 6.2:-6133863 | MS.gene031018:intron |
| AAGTAACATTGTTGATTCAA+AGG | 0.485175 | 6.2:-6132840 | MS.gene031018:CDS |
| GGGCAGCAATGTTTGGCCAT+TGG | 0.491030 | 6.2:-6134725 | MS.gene031018:CDS |
| AATAGGAAGTTGAGGAGGAA+GGG | 0.492835 | 6.2:+6138711 | None:intergenic |
| AGTTGAAAGCTTACCTCTGC+AGG | 0.496889 | 6.2:+6136311 | None:intergenic |
| ATGTGTTACTTTCAAACAGT+TGG | 0.501790 | 6.2:+6135893 | None:intergenic |
| CTGAGGAACGATTCGACGTA+CGG | 0.506262 | 6.2:+6133814 | None:intergenic |
| AGTCGTCGTCTCTGAAAGTC+GGG | 0.506598 | 6.2:-6134745 | MS.gene031018:CDS |
| AAATAGGAAGTTGAGGAGGA+AGG | 0.508302 | 6.2:+6138710 | None:intergenic |
| GCCGCAATATTTACTCAGAC+AGG | 0.513837 | 6.2:-6134091 | MS.gene031018:intron |
| TAAATGTACAGCACTAGCAT+TGG | 0.516141 | 6.2:-6136396 | MS.gene031018:intron |
| AAATGTACAGCACTAGCATT+GGG | 0.518650 | 6.2:-6136395 | MS.gene031018:intron |
| ACGAATTAATATTCTAGCAT+CGG | 0.519324 | 6.2:-6135373 | MS.gene031018:CDS |
| GAGTCGTCGTCTCTGAAAGT+CGG | 0.521398 | 6.2:-6134746 | MS.gene031018:CDS |
| CTCTGTTCCTCAAGTACCAC+AGG | 0.533162 | 6.2:+6132796 | None:intergenic |
| ATTCGACGTACGGTTGAAGA+TGG | 0.535780 | 6.2:+6133824 | None:intergenic |
| TTTGCTGGTAATATAGTCCT+TGG | 0.536354 | 6.2:-6133383 | MS.gene031018:CDS |
| ATTAATATTCTAGCATCGGA+AGG | 0.539822 | 6.2:-6135369 | MS.gene031018:CDS |
| GCAGGAACTTCAGCTGGTGT+AGG | 0.547550 | 6.2:-6133857 | MS.gene031018:intron |
| TAATGTGACTGGTGTGGTTG+AGG | 0.550492 | 6.2:-6135827 | MS.gene031018:intron |
| CACATTGTGACAAATTATCA+TGG | 0.551365 | 6.2:-6135626 | MS.gene031018:intron |
| CTTACCTCTGCAGGAAAGAG+TGG | 0.551630 | 6.2:+6136320 | None:intergenic |
| CTTCCTTTCGAATTCAGAAG+TGG | 0.558016 | 6.2:+6134130 | None:intergenic |
| CGTCCCCAACTTAATGTGAC+TGG | 0.562700 | 6.2:-6135838 | MS.gene031018:CDS |
| TTTGATCACACCCTCACAGT+TGG | 0.563545 | 6.2:-6134689 | MS.gene031018:CDS |
| CGAGCCACTCTTTCCTGCAG+AGG | 0.564768 | 6.2:-6136324 | MS.gene031018:intron |
| CTTTCGAGAAACCCAAGCTC+CGG | 0.565056 | 6.2:-6135408 | MS.gene031018:CDS |
| GGCATCATGGTTACAAAGAG+AGG | 0.568733 | 6.2:+6138732 | None:intergenic |
| GTATTGGATGAGTATAATGT+AGG | 0.571729 | 6.2:-6132868 | MS.gene031018:CDS |
| TGGAGTAGTTTGGGATGAAG+AGG | 0.573454 | 6.2:-6135651 | MS.gene031018:CDS |
| GACTGTTCAAGATGAAACTC+AGG | 0.574029 | 6.2:-6137283 | MS.gene031018:CDS |
| GAGCAGAGGAGAGTTGTTGA+AGG | 0.574556 | 6.2:-6132890 | MS.gene031018:CDS |
| ACTAATAACGCCAACTGTGA+GGG | 0.574837 | 6.2:+6134679 | None:intergenic |
| ACCAGCAAAGCCTCTTGCAG+TGG | 0.576026 | 6.2:+6133397 | None:intergenic |
| ACTGATGCAGCCATAAATCC+CGG | 0.576480 | 6.2:-6134599 | MS.gene031018:CDS |
| CCAGCAAAGCCTCTTGCAGT+GGG | 0.577651 | 6.2:+6133398 | None:intergenic |
| AATTCGTGCAACAACCTGAC+CGG | 0.578178 | 6.2:+6135389 | None:intergenic |
| AGGGTGTGATCAAAGCCAAA+TGG | 0.578277 | 6.2:+6134698 | None:intergenic |
| GTTGAGGAGGAAGGGCATCA+TGG | 0.579284 | 6.2:+6138719 | None:intergenic |
| TATCAGCATGCAACAATATG+TGG | 0.580336 | 6.2:-6138831 | MS.gene031018:CDS |
| TGTTAGAGCTGGATTGAATG+TGG | 0.584555 | 6.2:-6133621 | MS.gene031018:CDS |
| CACTAATAACGCCAACTGTG+AGG | 0.588910 | 6.2:+6134678 | None:intergenic |
| CTCTGCAGGAAAGAGTGGCT+CGG | 0.589571 | 6.2:+6136325 | None:intergenic |
| TGGCTTTAAAATATCTTTAG+GGG | 0.590720 | 6.2:+6134781 | None:intergenic |
| AAAACTGGTGTAACAATTGG+TGG | 0.591377 | 6.2:-6134632 | MS.gene031018:CDS |
| GGACTAAATCCCACTGCAAG+AGG | 0.593841 | 6.2:-6133407 | MS.gene031018:CDS |
| GAAATGGAAATAGGAAGTTG+AGG | 0.595967 | 6.2:+6138703 | None:intergenic |
| GGAGTAGTTTGGGATGAAGA+GGG | 0.618790 | 6.2:-6135650 | MS.gene031018:CDS |
| CTGCAATGATGATATCTCCA+AGG | 0.619534 | 6.2:+6133366 | None:intergenic |
| AAAGCCAAATGGATTTCCAA+TGG | 0.620070 | 6.2:+6134709 | None:intergenic |
| TCTTGGTAGGTCAAGAGCAG+AGG | 0.621541 | 6.2:-6132904 | MS.gene031018:intron |
| TTTAAAGCCAATCAATGTGG+GGG | 0.621642 | 6.2:-6134768 | MS.gene031018:CDS |
| ATGGAAATAGGAAGTTGAGG+AGG | 0.624451 | 6.2:+6138706 | None:intergenic |
| ACGTACGGTTGAAGATGGAA+TGG | 0.624478 | 6.2:+6133829 | None:intergenic |
| TCATACCGGCAGATTCCTGA+AGG | 0.625189 | 6.2:-6135683 | MS.gene031018:intron |
| GGTCCACTTCTGAATTCGAA+AGG | 0.625577 | 6.2:-6134133 | MS.gene031018:CDS |
| GAAGCTGCCTGTGGTACTTG+AGG | 0.629383 | 6.2:-6132803 | MS.gene031018:CDS |
| TTCTGGTAACATGATAAGGA+AGG | 0.629485 | 6.2:-6137259 | MS.gene031018:CDS |
| GCTCGGAAGAAAACACAGGA+GGG | 0.633419 | 6.2:+6136342 | None:intergenic |
| CTCGGAAGAAAACACAGGAG+GGG | 0.639626 | 6.2:+6136343 | None:intergenic |
| GGCTCGGAAGAAAACACAGG+AGG | 0.639827 | 6.2:+6136341 | None:intergenic |
| GCCTGTCTGAGTAAATATTG+CGG | 0.643094 | 6.2:+6134090 | None:intergenic |
| AGGAAGATATGCAAATCTCA+CGG | 0.655143 | 6.2:+6138752 | None:intergenic |
| TTAATATTCTAGCATCGGAA+GGG | 0.655686 | 6.2:-6135368 | MS.gene031018:intron |
| TTTCCAAACTGAATCAACTG+AGG | 0.656560 | 6.2:+6133797 | None:intergenic |
| CATGATAATTTGTCACAATG+TGG | 0.665554 | 6.2:+6135627 | None:intergenic |
| TTCCTATTTCCATTTCAACA+AGG | 0.669296 | 6.2:-6138696 | MS.gene031018:intron |
| ACACCAGTCACATTAAGTTG+GGG | 0.671487 | 6.2:+6135835 | None:intergenic |
| GTAACATTGTTGATTCAAAG+GGG | 0.673201 | 6.2:-6132838 | MS.gene031018:CDS |
| AGTGGCTCGGAAGAAAACAC+AGG | 0.682006 | 6.2:+6136338 | None:intergenic |
| ACTGGTGTAACAATTGGTGG+TGG | 0.687681 | 6.2:-6134629 | MS.gene031018:CDS |
| CCAACTTAATGTGACTGGTG+TGG | 0.695248 | 6.2:-6135833 | MS.gene031018:CDS |
| TGAAAAGTTGAAGCTGCCTG+TGG | 0.724537 | 6.2:-6132812 | MS.gene031018:CDS |
| AAGATATGCAAATCTCACGG+CGG | 0.795918 | 6.2:+6138755 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAGTAAATATGAAAT+TGG | - | chr6.2:6135080-6135099 | MS.gene031018:intron | 10.0% |
| !!! | TTATTTTATTTTGTAACAAA+CGG | - | chr6.2:6138557-6138576 | MS.gene031018:intron | 10.0% |
| !!! | TTCATTAATTTGAAAAATTT+TGG | - | chr6.2:6138698-6138717 | MS.gene031018:CDS | 10.0% |
| !! | AATATAAACATACATAATCA+AGG | + | chr6.2:6136569-6136588 | None:intergenic | 15.0% |
| !! | ATTGAAAATTGAAATCTTAA+GGG | + | chr6.2:6134187-6134206 | None:intergenic | 15.0% |
| !! | TATTGAAAATTGAAATCTTA+AGG | + | chr6.2:6134188-6134207 | None:intergenic | 15.0% |
| !! | TATTTACAAAAATTGAGAAT+TGG | - | chr6.2:6138344-6138363 | MS.gene031018:intron | 15.0% |
| !! | TTTGATTGTTATACATATAA+TGG | - | chr6.2:6134226-6134245 | MS.gene031018:intron | 15.0% |
| !!! | AAAGAAAAAACTATAACTTT+TGG | + | chr6.2:6137707-6137726 | None:intergenic | 15.0% |
| !!! | AATTAAAAGTATAGAAATCA+TGG | + | chr6.2:6135701-6135720 | None:intergenic | 15.0% |
| !!! | CAATATGAAATGAATAATTT+TGG | + | chr6.2:6138601-6138620 | None:intergenic | 15.0% |
| !!! | TATTTTATTTTGTAACAAAC+GGG | - | chr6.2:6138558-6138577 | MS.gene031018:intron | 15.0% |
| !!! | TTTATTTTTGTTTACTGTTT+GGG | - | chr6.2:6134285-6134304 | MS.gene031018:intron | 15.0% |
| !!! | TTTTATTTTTGTTTACTGTT+TGG | - | chr6.2:6134284-6134303 | MS.gene031018:intron | 15.0% |
| !!! | TTTTTACTTACAAATATCAT+TGG | - | chr6.2:6135599-6135618 | MS.gene031018:intron | 15.0% |
| !! | AAAACCTAAAATTCTCATAA+GGG | + | chr6.2:6133084-6133103 | None:intergenic | 20.0% |
| !! | AAACTTTGCTAGTAAATAAT+AGG | + | chr6.2:6135195-6135214 | None:intergenic | 20.0% |
| !! | AATAAGATGAAAACAACTTA+TGG | - | chr6.2:6137285-6137304 | MS.gene031018:CDS | 20.0% |
| !! | AGTTACTAACCTAATTATAA+TGG | + | chr6.2:6133508-6133527 | None:intergenic | 20.0% |
| !! | ATAAATACAAAGTTTGATTG+TGG | + | chr6.2:6138124-6138143 | None:intergenic | 20.0% |
| !! | ATATACAAACAATTTAGTGT+CGG | - | chr6.2:6137880-6137899 | MS.gene031018:intron | 20.0% |
| !! | GAAAAACAACAATAAAAGTA+AGG | + | chr6.2:6137745-6137764 | None:intergenic | 20.0% |
| !!! | AATCATTGACTCAAATATAA+GGG | + | chr6.2:6137975-6137994 | None:intergenic | 20.0% |
| !!! | ACTTTTATTGTTGTTTTTCT+TGG | - | chr6.2:6137746-6137765 | MS.gene031018:intron | 20.0% |
| !!! | ATGAAAAAAGGTTCAAATTT+TGG | + | chr6.2:6134252-6134271 | None:intergenic | 20.0% |
| !!! | ATGTTTTCTTTTCTACTTTT+TGG | - | chr6.2:6136427-6136446 | MS.gene031018:intron | 20.0% |
| !!! | ATTGGCTTTAAAATATCTTT+AGG | + | chr6.2:6136854-6136873 | None:intergenic | 20.0% |
| !!! | CAAATATAAGGGTATATATA+TGG | + | chr6.2:6137964-6137983 | None:intergenic | 20.0% |
| !!! | GAAGATTTTAAGATAATGTA+AGG | - | chr6.2:6136153-6136172 | MS.gene031018:intron | 20.0% |
| !!! | TAAAAGCATATATATGTCTA+CGG | + | chr6.2:6136095-6136114 | None:intergenic | 20.0% |
| !!! | TAGAGTTTTACATAAAACAA+TGG | + | chr6.2:6138655-6138674 | None:intergenic | 20.0% |
| !!! | TTGGCTTTAAAATATCTTTA+GGG | + | chr6.2:6136853-6136872 | None:intergenic | 20.0% |
| !!! | TTTCTATACTTTTAATTTGC+AGG | - | chr6.2:6135704-6135723 | MS.gene031018:intron | 20.0% |
| ! | AAAATAAACCTAATCCAAAC+GGG | + | chr6.2:6133285-6133304 | None:intergenic | 25.0% |
| ! | AATCACTTGTCTACTTATAA+AGG | + | chr6.2:6138678-6138697 | None:intergenic | 25.0% |
| ! | AATGAACTTTCCAATATACT+TGG | + | chr6.2:6134769-6134788 | None:intergenic | 25.0% |
| ! | ACGAATTAATATTCTAGCAT+CGG | - | chr6.2:6136257-6136276 | MS.gene031018:intron | 25.0% |
| ! | AGTAGATGACCATTATAATT+AGG | - | chr6.2:6133496-6133515 | MS.gene031018:intron | 25.0% |
| ! | CAAAACCTAAAATTCTCATA+AGG | + | chr6.2:6133085-6133104 | None:intergenic | 25.0% |
| ! | CAAAATAAACCTAATCCAAA+CGG | + | chr6.2:6133286-6133305 | None:intergenic | 25.0% |
| ! | CAGAAACAAGAAATCAAATT+TGG | + | chr6.2:6136813-6136832 | None:intergenic | 25.0% |
| ! | GAAAAATGTGATTGTCATTA+GGG | - | chr6.2:6138444-6138463 | MS.gene031018:intron | 25.0% |
| ! | GCTTATTTGAACTTATTTAC+TGG | + | chr6.2:6134080-6134099 | None:intergenic | 25.0% |
| ! | GTATACCAATAAGCTATTAT+AGG | + | chr6.2:6134673-6134692 | None:intergenic | 25.0% |
| ! | TAGCAATTAATAAAGAGCTT+CGG | + | chr6.2:6138319-6138338 | None:intergenic | 25.0% |
| ! | TCTGTATCATCTTATTATGA+TGG | + | chr6.2:6137586-6137605 | None:intergenic | 25.0% |
| ! | TGGTATACTATAACAGATAA+TGG | - | chr6.2:6134685-6134704 | MS.gene031018:CDS | 25.0% |
| ! | TTCAAATAAGCCAATTCAAA+GGG | - | chr6.2:6134089-6134108 | MS.gene031018:intron | 25.0% |
| ! | TTCTTGTATTACTCAGTAAT+TGG | - | chr6.2:6136192-6136211 | MS.gene031018:intron | 25.0% |
| ! | TTGATCCTATAATAGCTTAT+TGG | - | chr6.2:6134665-6134684 | MS.gene031018:CDS | 25.0% |
| ! | TTTACAACTTATGTTTCCTT+AGG | - | chr6.2:6138171-6138190 | MS.gene031018:intron | 25.0% |
| ! | TTTGGATATATAACTGGATT+AGG | - | chr6.2:6133105-6133124 | MS.gene031018:intron | 25.0% |
| !! | AAGATATTGATAACCATGAT+AGG | + | chr6.2:6135419-6135438 | None:intergenic | 25.0% |
| !! | AAGGGTTAAATATTTTGTAC+CGG | + | chr6.2:6134169-6134188 | None:intergenic | 25.0% |
| !! | CAGTTTTACTAAAGATATCT+CGG | + | chr6.2:6136985-6137004 | None:intergenic | 25.0% |
| !! | TATAACACTTTTGAATCCTT+CGG | - | chr6.2:6135372-6135391 | MS.gene031018:CDS | 25.0% |
| !! | TATATTTCTGTAAACGTTGA+TGG | - | chr6.2:6134818-6134837 | MS.gene031018:intron | 25.0% |
| !! | TTTTTGCTTATAATTGAGTC+TGG | + | chr6.2:6133169-6133188 | None:intergenic | 25.0% |
| !!! | AAGTAACATTGTTGATTCAA+AGG | - | chr6.2:6138790-6138809 | MS.gene031018:CDS | 25.0% |
| !!! | AATTTTGAAGGTATACTCAT+TGG | - | chr6.2:6136368-6136387 | MS.gene031018:CDS | 25.0% |
| !!! | ACAAGCAACATTTTAAAATC+AGG | + | chr6.2:6135580-6135599 | None:intergenic | 25.0% |
| !!! | AGTAACATTGTTGATTCAAA+GGG | - | chr6.2:6138791-6138810 | MS.gene031018:CDS | 25.0% |
| !!! | ATTTTAAAGCCAATCAATGT+GGG | - | chr6.2:6136860-6136879 | MS.gene031018:intron | 25.0% |
| !!! | GAAAAATTTTGGTACATTCT+TGG | - | chr6.2:6138709-6138728 | MS.gene031018:CDS | 25.0% |
| !!! | GAATCATTGACTCAAATATA+AGG | + | chr6.2:6137976-6137995 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTGGATATATAAC+TGG | - | chr6.2:6133099-6133118 | MS.gene031018:intron | 25.0% |
| !!! | TATTTTAAAGCCAATCAATG+TGG | - | chr6.2:6136859-6136878 | MS.gene031018:intron | 25.0% |
| !!! | TGAGAATTTTAGGTTTTGTT+TGG | - | chr6.2:6133087-6133106 | MS.gene031018:intron | 25.0% |
| !!! | TGGAATAGTTTTAGTATAAG+AGG | - | chr6.2:6134595-6134614 | MS.gene031018:CDS | 25.0% |
| !!! | TGGCTTTAAAATATCTTTAG+GGG | + | chr6.2:6136852-6136871 | None:intergenic | 25.0% |
| !!! | TTTAAGGTCTTTTTGAACTT+GGG | + | chr6.2:6134116-6134135 | None:intergenic | 25.0% |
| AAAATAGATCTTCGGATTCA+TGG | - | chr6.2:6135655-6135674 | MS.gene031018:CDS | 30.0% | |
| AAATGGAGCTCTTATTCTTA+CGG | - | chr6.2:6138072-6138091 | MS.gene031018:intron | 30.0% | |
| AACTTGGGGAAAAAAGATAA+AGG | + | chr6.2:6134647-6134666 | None:intergenic | 30.0% | |
| AAGCTATTATAGGATCAACT+TGG | + | chr6.2:6134663-6134682 | None:intergenic | 30.0% | |
| AAGTGTTATACAAACCACAA+TGG | + | chr6.2:6135362-6135381 | None:intergenic | 30.0% | |
| AATCAACTTAACGTTCGAAA+TGG | - | chr6.2:6138055-6138074 | MS.gene031018:intron | 30.0% | |
| AATCGAACAATATGTCTATC+AGG | + | chr6.2:6135157-6135176 | None:intergenic | 30.0% | |
| AATTCGAAAGGAAGCTTAAT+TGG | - | chr6.2:6137509-6137528 | MS.gene031018:intron | 30.0% | |
| ACTATTCCAAACAATTACAC+TGG | + | chr6.2:6134584-6134603 | None:intergenic | 30.0% | |
| ACTATTTGAGAAAGAGCTTA+TGG | + | chr6.2:6134041-6134060 | None:intergenic | 30.0% | |
| ACTTATTTCCATAAACTCTC+TGG | + | chr6.2:6133762-6133781 | None:intergenic | 30.0% | |
| AGCTATTATAGGATCAACTT+GGG | + | chr6.2:6134662-6134681 | None:intergenic | 30.0% | |
| AGCTTATGTATAAGCTTAGT+AGG | + | chr6.2:6133726-6133745 | None:intergenic | 30.0% | |
| AGTAAAACTGGTGTAACAAT+TGG | - | chr6.2:6136995-6137014 | MS.gene031018:intron | 30.0% | |
| ATATTCAAAAGCAGGATTCA+AGG | + | chr6.2:6135541-6135560 | None:intergenic | 30.0% | |
| ATCCATAATAAGCACTCATA+TGG | + | chr6.2:6133930-6133949 | None:intergenic | 30.0% | |
| ATTCAAAATCGATAGACACT+AGG | + | chr6.2:6135508-6135527 | None:intergenic | 30.0% | |
| ATTCGAAAGGAAGCTTAATT+GGG | - | chr6.2:6137510-6137529 | MS.gene031018:intron | 30.0% | |
| ATTTCGAACTGGAATTTGAA+GGG | - | chr6.2:6134786-6134805 | MS.gene031018:CDS | 30.0% | |
| ATTTGACAACACTGCATAAT+AGG | + | chr6.2:6134864-6134883 | None:intergenic | 30.0% | |
| CAAAATAAGCCTAATCCAAA+TGG | - | chr6.2:6133465-6133484 | MS.gene031018:intron | 30.0% | |
| CACATAGTTCACTAAAATCT+TGG | + | chr6.2:6136134-6136153 | None:intergenic | 30.0% | |
| CACATTGTGACAAATTATCA+TGG | - | chr6.2:6136004-6136023 | MS.gene031018:intron | 30.0% | |
| CGAAAAATGTGATTGTCATT+AGG | - | chr6.2:6138443-6138462 | MS.gene031018:intron | 30.0% | |
| CGAGATATCTTTAGTAAAAC+TGG | - | chr6.2:6136983-6137002 | MS.gene031018:intron | 30.0% | |
| CTTGTGCAAAATTATGAATG+TGG | - | chr6.2:6136508-6136527 | MS.gene031018:intron | 30.0% | |
| GCATTTCATATATATGCCTA+TGG | + | chr6.2:6136645-6136664 | None:intergenic | 30.0% | |
| GGAAAAGTAAGTAGTTAACT+GGG | - | chr6.2:6137851-6137870 | MS.gene031018:intron | 30.0% | |
| GGATTCAGAAAATAGATCTT+CGG | - | chr6.2:6135647-6135666 | MS.gene031018:CDS | 30.0% | |
| GTACAAGAATGATATATGGT+AGG | - | chr6.2:6135896-6135915 | MS.gene031018:CDS | 30.0% | |
| GTATCTTACAAACTCATGAT+TGG | - | chr6.2:6135626-6135645 | MS.gene031018:intron | 30.0% | |
| GTATTGGATGAGTATAATGT+AGG | - | chr6.2:6138762-6138781 | MS.gene031018:CDS | 30.0% | |
| GTCAATGATTCGTCAATTTA+AGG | - | chr6.2:6137985-6138004 | MS.gene031018:intron | 30.0% | |
| GTTCAAATAAGCCAATTCAA+AGG | - | chr6.2:6134088-6134107 | MS.gene031018:intron | 30.0% | |
| TAAAACAATGGCATAAGCAT+AGG | + | chr6.2:6138643-6138662 | None:intergenic | 30.0% | |
| TAAGGTTGCTAGTGAAATTA+CGG | - | chr6.2:6136467-6136486 | MS.gene031018:intron | 30.0% | |
| TACCATATGAGTGCTTATTA+TGG | - | chr6.2:6133925-6133944 | MS.gene031018:intron | 30.0% | |
| TACCTTGTTGAAATGGAAAT+AGG | + | chr6.2:6132939-6132958 | None:intergenic | 30.0% | |
| TAGCGTACAAGAATGATATA+TGG | - | chr6.2:6135892-6135911 | MS.gene031018:CDS | 30.0% | |
| TCAAATAAGCCAATTCAAAG+GGG | - | chr6.2:6134090-6134109 | MS.gene031018:intron | 30.0% | |
| TCAAATAAGCTAATCCAAAC+AGG | - | chr6.2:6137382-6137401 | MS.gene031018:intron | 30.0% | |
| TCACTAAGGATTACTCTTTA+AGG | + | chr6.2:6134132-6134151 | None:intergenic | 30.0% | |
| TCCAAGATAGTTCATGAAAA+CGG | + | chr6.2:6137254-6137273 | None:intergenic | 30.0% | |
| TCTACTATTCTTGACTTTAC+TGG | + | chr6.2:6133644-6133663 | None:intergenic | 30.0% | |
| TGGAAAAGTAAGTAGTTAAC+TGG | - | chr6.2:6137850-6137869 | MS.gene031018:intron | 30.0% | |
| TGTATAAGCACTTACTACTT+CGG | + | chr6.2:6133688-6133707 | None:intergenic | 30.0% | |
| TGTATAAGCTTAGTAGGAAA+AGG | + | chr6.2:6133720-6133739 | None:intergenic | 30.0% | |
| TTCCTATTTCCATTTCAACA+AGG | - | chr6.2:6132934-6132953 | MS.gene031018:intron | 30.0% | |
| TTTCAAACAGTTGGACAATT+CGG | + | chr6.2:6135731-6135750 | None:intergenic | 30.0% | |
| TTTCTAGGTTATTCCTATCA+TGG | - | chr6.2:6135403-6135422 | MS.gene031018:CDS | 30.0% | |
| ! | AATAGTCTTGCTGCAAAAAT+AGG | - | chr6.2:6138202-6138221 | MS.gene031018:intron | 30.0% |
| ! | AGGGTAATCAAGAATTTTGA+AGG | - | chr6.2:6136356-6136375 | MS.gene031018:CDS | 30.0% |
| ! | ATTAATATTCTAGCATCGGA+AGG | - | chr6.2:6136261-6136280 | MS.gene031018:intron | 30.0% |
| ! | CATGATAATTTGTCACAATG+TGG | + | chr6.2:6136006-6136025 | None:intergenic | 30.0% |
| ! | CTGACACGTTACTTTATAAA+GGG | - | chr6.2:6136337-6136356 | MS.gene031018:CDS | 30.0% |
| ! | GTCACATTTTGTATTCATAC+CGG | - | chr6.2:6135933-6135952 | MS.gene031018:intron | 30.0% |
| ! | TATAGCCGAGGAAATATTTT+TGG | - | chr6.2:6137630-6137649 | MS.gene031018:intron | 30.0% |
| ! | TCTGACACGTTACTTTATAA+AGG | - | chr6.2:6136336-6136355 | MS.gene031018:CDS | 30.0% |
| ! | TTAATATTCTAGCATCGGAA+GGG | - | chr6.2:6136262-6136281 | MS.gene031018:intron | 30.0% |
| ! | TTTTAGTGTGACTCTAATAG+CGG | - | chr6.2:6137473-6137492 | MS.gene031018:intron | 30.0% |
| !! | AATTTTGGTACATTCTTGGT+AGG | - | chr6.2:6138713-6138732 | MS.gene031018:CDS | 30.0% |
| !! | ATGTGTTACTTTCAAACAGT+TGG | + | chr6.2:6135740-6135759 | None:intergenic | 30.0% |
| !! | ATTTTTGTTTACTGTTTGGG+AGG | - | chr6.2:6134288-6134307 | MS.gene031018:intron | 30.0% |
| !! | GAACCTGAAGCTTTAAATTA+AGG | + | chr6.2:6134622-6134641 | None:intergenic | 30.0% |
| !! | GTAACATTGTTGATTCAAAG+GGG | - | chr6.2:6138792-6138811 | MS.gene031018:CDS | 30.0% |
| !! | TAATTGCTTTTCTTTGCATG+TGG | - | chr6.2:6137666-6137685 | MS.gene031018:intron | 30.0% |
| !! | TTCATGATTGGTGTTAACTA+GGG | - | chr6.2:6137422-6137441 | MS.gene031018:intron | 30.0% |
| !! | TTGAATCCTGCTTTTGAATA+TGG | - | chr6.2:6135540-6135559 | MS.gene031018:intron | 30.0% |
| !! | TTTCATGATTGGTGTTAACT+AGG | - | chr6.2:6137421-6137440 | MS.gene031018:intron | 30.0% |
| !! | TTTTTGTTTACTGTTTGGGA+GGG | - | chr6.2:6134289-6134308 | MS.gene031018:intron | 30.0% |
| !!! | AGACTATTTTTTGGAACCTA+AGG | + | chr6.2:6138190-6138209 | None:intergenic | 30.0% |
| !!! | CTTTAAGGTCTTTTTGAACT+TGG | + | chr6.2:6134117-6134136 | None:intergenic | 30.0% |
| !!! | TTTGCAGCAAGACTATTTTT+TGG | + | chr6.2:6138199-6138218 | None:intergenic | 30.0% |
| !!! | TTTTAAAGCCAATCAATGTG+GGG | - | chr6.2:6136861-6136880 | MS.gene031018:intron | 30.0% |
| AAAACTGGTGTAACAATTGG+TGG | - | chr6.2:6136998-6137017 | MS.gene031018:intron | 35.0% | |
| AAAAGCAATTAGACCAACAG+TGG | + | chr6.2:6137657-6137676 | None:intergenic | 35.0% | |
| AAAGCAATTAGACCAACAGT+GGG | + | chr6.2:6137656-6137675 | None:intergenic | 35.0% | |
| AAATGTACAGCACTAGCATT+GGG | - | chr6.2:6135235-6135254 | MS.gene031018:CDS | 35.0% | |
| AACAAGTGCTCTTTCATGAT+TGG | - | chr6.2:6137410-6137429 | MS.gene031018:intron | 35.0% | |
| AACATGAAAACAGAACTGTG+CGG | + | chr6.2:6134480-6134499 | None:intergenic | 35.0% | |
| AAGAGTAATCCTTAGTGAGT+AGG | - | chr6.2:6134134-6134153 | MS.gene031018:CDS | 35.0% | |
| AAGGTTGCTAGTGAAATTAC+GGG | - | chr6.2:6136468-6136487 | MS.gene031018:intron | 35.0% | |
| AGGAAGATATGCAAATCTCA+CGG | + | chr6.2:6132881-6132900 | None:intergenic | 35.0% | |
| AGGATTCTGGTAACATGATA+AGG | - | chr6.2:6134367-6134386 | MS.gene031018:intron | 35.0% | |
| AGTGCTTATGTCAGTAGATT+AGG | - | chr6.2:6133846-6133865 | MS.gene031018:CDS | 35.0% | |
| ATCTACTCACAATAGCCATT+TGG | + | chr6.2:6133483-6133502 | None:intergenic | 35.0% | |
| ATCTTAGTGTAACCTGTTTC+CGG | + | chr6.2:6137053-6137072 | None:intergenic | 35.0% | |
| ATGGTAGGAATGAAACAACA+TGG | - | chr6.2:6135911-6135930 | MS.gene031018:intron | 35.0% | |
| ATTCTTGACTTTACTGGTAC+TGG | + | chr6.2:6133638-6133657 | None:intergenic | 35.0% | |
| ATTTCACTAGCAACCTTACT+TGG | + | chr6.2:6136465-6136484 | None:intergenic | 35.0% | |
| CATTTCGAACTGGAATTTGA+AGG | - | chr6.2:6134785-6134804 | MS.gene031018:CDS | 35.0% | |
| CTTGATTAGTAGCTAAAGAG+TGG | - | chr6.2:6133057-6133076 | MS.gene031018:intron | 35.0% | |
| GAAATGGAAATAGGAAGTTG+AGG | + | chr6.2:6132930-6132949 | None:intergenic | 35.0% | |
| GACATGTTTATAAGCTCTTC+TGG | + | chr6.2:6134007-6134026 | None:intergenic | 35.0% | |
| GAGTTATACCAGAGAGTTTA+TGG | - | chr6.2:6133751-6133770 | MS.gene031018:intron | 35.0% | |
| GCTATTATAGGATCAACTTG+GGG | + | chr6.2:6134661-6134680 | None:intergenic | 35.0% | |
| GGTACAAGAAACAAATGTCA+TGG | + | chr6.2:6138103-6138122 | None:intergenic | 35.0% | |
| GTGCTTATGTCAGTAGATTA+GGG | - | chr6.2:6133847-6133866 | MS.gene031018:CDS | 35.0% | |
| TAAAGAGCTTCGGTAAAAGA+AGG | + | chr6.2:6138309-6138328 | None:intergenic | 35.0% | |
| TAAATGTACAGCACTAGCAT+TGG | - | chr6.2:6135234-6135253 | MS.gene031018:CDS | 35.0% | |
| TATCAGCATGCAACAATATG+TGG | - | chr6.2:6132799-6132818 | MS.gene031018:CDS | 35.0% | |
| TCACAATAGCCATTTGGATT+AGG | + | chr6.2:6133477-6133496 | None:intergenic | 35.0% | |
| TGATAGCCATATTCAAAAGC+AGG | + | chr6.2:6135549-6135568 | None:intergenic | 35.0% | |
| TGCACTCTTGTGATGAAAAA+AGG | + | chr6.2:6134264-6134283 | None:intergenic | 35.0% | |
| TGTTGTTGATGTGTGCTTAT+AGG | - | chr6.2:6134325-6134344 | MS.gene031018:intron | 35.0% | |
| TTCTGGTAACATGATAAGGA+AGG | - | chr6.2:6134371-6134390 | MS.gene031018:intron | 35.0% | |
| TTGAACCAAATAGCGTATCA+AGG | + | chr6.2:6134945-6134964 | None:intergenic | 35.0% | |
| TTGCTTATAATTGAGTCTGG+AGG | + | chr6.2:6133166-6133185 | None:intergenic | 35.0% | |
| TTGGAAAGTTCATTTCGAAC+TGG | - | chr6.2:6134775-6134794 | MS.gene031018:CDS | 35.0% | |
| TTGTCAAATAGCTGATGTAG+TGG | - | chr6.2:6134875-6134894 | MS.gene031018:intron | 35.0% | |
| TTGTTCCTTGATACGCTATT+TGG | - | chr6.2:6134937-6134956 | MS.gene031018:intron | 35.0% | |
| TTTCCAAACTGAATCAACTG+AGG | + | chr6.2:6137836-6137855 | None:intergenic | 35.0% | |
| TTTGCTGGTAATATAGTCCT+TGG | - | chr6.2:6138247-6138266 | MS.gene031018:intron | 35.0% | |
| ! | AAAGCCAAATGGATTTCCAA+TGG | + | chr6.2:6136924-6136943 | None:intergenic | 35.0% |
| ! | ACCGTTTTCATGAACTATCT+TGG | - | chr6.2:6137250-6137269 | MS.gene031018:CDS | 35.0% |
| ! | CAATTTAAGGTTGTTAGAGC+TGG | - | chr6.2:6137998-6138017 | MS.gene031018:intron | 35.0% |
| ! | GGTCCTTAATTTAAAGCTTC+AGG | - | chr6.2:6134616-6134635 | MS.gene031018:CDS | 35.0% |
| ! | TGGTCCCTTATGAGAATTTT+AGG | - | chr6.2:6133077-6133096 | MS.gene031018:intron | 35.0% |
| ! | TTTAAAGCCAATCAATGTGG+GGG | - | chr6.2:6136862-6136881 | MS.gene031018:intron | 35.0% |
| !! | AGAAGAGTACCTTGTTGAAA+TGG | + | chr6.2:6132946-6132965 | None:intergenic | 35.0% |
| !! | AGTTGATTTGCAATCAAGTC+TGG | + | chr6.2:6138043-6138062 | None:intergenic | 35.0% |
| !! | ATTCCTGTTTCTGTTCTTCA+AGG | - | chr6.2:6134442-6134461 | MS.gene031018:intron | 35.0% |
| !! | CTACTTACTTGAGTCTTGTT+TGG | - | chr6.2:6137110-6137129 | MS.gene031018:intron | 35.0% |
| !! | TTTCTTGTTTCTGCTGTAAC+AGG | - | chr6.2:6136820-6136839 | MS.gene031018:intron | 35.0% |
| !! | TTTTTCAGTCCTACTCACTA+AGG | + | chr6.2:6134146-6134165 | None:intergenic | 35.0% |
| !!! | AAATATTTTTGGCCCACTGT+TGG | - | chr6.2:6137641-6137660 | MS.gene031018:intron | 35.0% |
| !!! | ACACTACTGATGCTTTTTTG+AGG | + | chr6.2:6132849-6132868 | None:intergenic | 35.0% |
| !!! | ATGCTTTTTTGAGGAGTTGT+TGG | + | chr6.2:6132840-6132859 | None:intergenic | 35.0% |
| !!! | GTTGTTTTTCTTGGTATTGC+AGG | - | chr6.2:6137755-6137774 | MS.gene031018:intron | 35.0% |
| AAACCGACAAATAACGTCCT+GGG | - | chr6.2:6136773-6136792 | MS.gene031018:intron | 40.0% | |
| AAAGGATCTAGCTGTCTTGA+AGG | - | chr6.2:6136403-6136422 | MS.gene031018:intron | 40.0% | |
| AAATAGGAAGTTGAGGAGGA+AGG | + | chr6.2:6132923-6132942 | None:intergenic | 40.0% | |
| AACGTCTGTGTTGTCAACTA+CGG | + | chr6.2:6135052-6135071 | None:intergenic | 40.0% | |
| AAGATATGCAAATCTCACGG+CGG | + | chr6.2:6132878-6132897 | None:intergenic | 40.0% | |
| AAGCTTAGTAGGAAAAGGCT+TGG | + | chr6.2:6133715-6133734 | None:intergenic | 40.0% | |
| AATAGGAAGTTGAGGAGGAA+GGG | + | chr6.2:6132922-6132941 | None:intergenic | 40.0% | |
| AATTAGTGCCCGTTTGGATT+AGG | - | chr6.2:6133274-6133293 | MS.gene031018:intron | 40.0% | |
| ACTAATAACGCCAACTGTGA+GGG | + | chr6.2:6136954-6136973 | None:intergenic | 40.0% | |
| ACTGCATAATAGGAGTGAGA+AGG | + | chr6.2:6134854-6134873 | None:intergenic | 40.0% | |
| AGCGTATCAAGGAACAATAG+TGG | + | chr6.2:6134934-6134953 | None:intergenic | 40.0% | |
| AGTGAGTAGGACTGAAAAAC+CGG | - | chr6.2:6134147-6134166 | MS.gene031018:intron | 40.0% | |
| ATAGCACGCACCAAGTATAT+TGG | - | chr6.2:6134756-6134775 | MS.gene031018:CDS | 40.0% | |
| ATGGAAATAGGAAGTTGAGG+AGG | + | chr6.2:6132927-6132946 | None:intergenic | 40.0% | |
| CAAACCACAATGGACAAAAG+AGG | + | chr6.2:6135352-6135371 | None:intergenic | 40.0% | |
| CAAGATGAAACTCAGGATTC+TGG | - | chr6.2:6134354-6134373 | MS.gene031018:intron | 40.0% | |
| CAATGGCATAAGCATAGGAA+AGG | + | chr6.2:6138638-6138657 | None:intergenic | 40.0% | |
| CACACCAGTCACATTAAGTT+GGG | + | chr6.2:6135799-6135818 | None:intergenic | 40.0% | |
| CACTTAAATTAGTGCCCGTT+TGG | - | chr6.2:6133268-6133287 | MS.gene031018:intron | 40.0% | |
| CATTGGAGCTGATCGTTTAA+AGG | - | chr6.2:6136385-6136404 | MS.gene031018:CDS | 40.0% | |
| CCTAGAAATATTGCTACCGA+AGG | + | chr6.2:6135391-6135410 | None:intergenic | 40.0% | |
| CCTATGGAAATGTGTACGAA+AGG | + | chr6.2:6136629-6136648 | None:intergenic | 40.0% | |
| CCTTCGGTAGCAATATTTCT+AGG | - | chr6.2:6135388-6135407 | MS.gene031018:CDS | 40.0% | |
| CCTTTCGTACACATTTCCAT+AGG | - | chr6.2:6136626-6136645 | MS.gene031018:intron | 40.0% | |
| CTGCAATGATGATATCTCCA+AGG | + | chr6.2:6138267-6138286 | None:intergenic | 40.0% | |
| CTTCCTTTCGAATTCAGAAG+TGG | + | chr6.2:6137503-6137522 | None:intergenic | 40.0% | |
| GACTGTTCAAGATGAAACTC+AGG | - | chr6.2:6134347-6134366 | MS.gene031018:intron | 40.0% | |
| GCCTGTCTGAGTAAATATTG+CGG | + | chr6.2:6137543-6137562 | None:intergenic | 40.0% | |
| GTACCTTGAAGAACAGAAAC+AGG | + | chr6.2:6134448-6134467 | None:intergenic | 40.0% | |
| GTGGGCCAAAAATATTTCCT+CGG | + | chr6.2:6137638-6137657 | None:intergenic | 40.0% | |
| GTGTGATTATGATATAGCCG+AGG | - | chr6.2:6137618-6137637 | MS.gene031018:intron | 40.0% | |
| TAAACCGACAAATAACGTCC+TGG | - | chr6.2:6136772-6136791 | MS.gene031018:intron | 40.0% | |
| TAACCTGTTTCCGGGATTTA+TGG | + | chr6.2:6137044-6137063 | None:intergenic | 40.0% | |
| TAAGCGCCAGTGTAATTGTT+TGG | - | chr6.2:6134575-6134594 | MS.gene031018:intron | 40.0% | |
| TATCAGCTATAGCCGCTATT+CGG | + | chr6.2:6134981-6135000 | None:intergenic | 40.0% | |
| TCTTAGTGTAACCTGTTTCC+GGG | + | chr6.2:6137052-6137071 | None:intergenic | 40.0% | |
| TGGAAGTAAAATATCCTCCC+AGG | + | chr6.2:6136793-6136812 | None:intergenic | 40.0% | |
| TGTTAGAGCTGGATTGAATG+TGG | - | chr6.2:6138009-6138028 | MS.gene031018:intron | 40.0% | |
| TTCAAAGTGTAGCCGAATAG+CGG | - | chr6.2:6134966-6134985 | MS.gene031018:intron | 40.0% | |
| TTGGCCATTGGAAATCCATT+TGG | - | chr6.2:6136917-6136936 | MS.gene031018:intron | 40.0% | |
| ! | AACAATTTAGTGTCGGACTC+CGG | - | chr6.2:6137887-6137906 | MS.gene031018:intron | 40.0% |
| ! | ACACCAGTCACATTAAGTTG+GGG | + | chr6.2:6135798-6135817 | None:intergenic | 40.0% |
| ! | AGGAGAGTTGTTGAAGGTAT+TGG | - | chr6.2:6138746-6138765 | MS.gene031018:CDS | 40.0% |
| ! | GTTCCTCAGTTGATTCAGTT+TGG | - | chr6.2:6137830-6137849 | MS.gene031018:intron | 40.0% |
| ! | TGTTCTTCAAGGTACTTGTC+AGG | - | chr6.2:6134453-6134472 | MS.gene031018:intron | 40.0% |
| !! | AAATGGCTCTGGAGTAGTTT+GGG | - | chr6.2:6135970-6135989 | MS.gene031018:intron | 40.0% |
| !! | AATATACTTGGTGCGTGCTA+TGG | + | chr6.2:6134757-6134776 | None:intergenic | 40.0% |
| !! | AGGACGTTATTTGTCGGTTT+AGG | + | chr6.2:6136773-6136792 | None:intergenic | 40.0% |
| !! | ATATACTTGGTGCGTGCTAT+GGG | + | chr6.2:6134756-6134775 | None:intergenic | 40.0% |
| !! | GCACTGATTCAATAAGCTTC+AGG | + | chr6.2:6134716-6134735 | None:intergenic | 40.0% |
| !! | TTCTTGAGTTGAGACTCGTA+CGG | - | chr6.2:6136587-6136606 | MS.gene031018:intron | 40.0% |
| AACCAAAGACCACGAGATTG+AGG | + | chr6.2:6133601-6133620 | None:intergenic | 45.0% | |
| AATTCGTGCAACAACCTGAC+CGG | + | chr6.2:6136244-6136263 | None:intergenic | 45.0% | |
| ACCAAAGACCACGAGATTGA+GGG | + | chr6.2:6133600-6133619 | None:intergenic | 45.0% | |
| ACCACAATGGACAAAAGAGG+AGG | + | chr6.2:6135349-6135368 | None:intergenic | 45.0% | |
| ACGTACGGTTGAAGATGGAA+TGG | + | chr6.2:6137804-6137823 | None:intergenic | 45.0% | |
| ACTGATGCAGCCATAAATCC+CGG | - | chr6.2:6137031-6137050 | MS.gene031018:intron | 45.0% | |
| ACTGGTGTAACAATTGGTGG+TGG | - | chr6.2:6137001-6137020 | MS.gene031018:intron | 45.0% | |
| AGGGTGTGATCAAAGCCAAA+TGG | + | chr6.2:6136935-6136954 | None:intergenic | 45.0% | |
| AGTTGAAAGCTTACCTCTGC+AGG | + | chr6.2:6135322-6135341 | None:intergenic | 45.0% | |
| ATTCCTGAAGGAAATGGCTC+TGG | - | chr6.2:6135959-6135978 | MS.gene031018:intron | 45.0% | |
| ATTCGACGTACGGTTGAAGA+TGG | + | chr6.2:6137809-6137828 | None:intergenic | 45.0% | |
| CACTAATAACGCCAACTGTG+AGG | + | chr6.2:6136955-6136974 | None:intergenic | 45.0% | |
| CATTTCCTTCAGGAATCTGC+CGG | + | chr6.2:6135955-6135974 | None:intergenic | 45.0% | |
| CCAACTTAATGTGACTGGTG+TGG | - | chr6.2:6135797-6135816 | MS.gene031018:intron | 45.0% | |
| CCACACCAGTCACATTAAGT+TGG | + | chr6.2:6135800-6135819 | None:intergenic | 45.0% | |
| CTCACAGTTGGCGTTATTAG+TGG | - | chr6.2:6136953-6136972 | MS.gene031018:intron | 45.0% | |
| GCACTTGTTCAACTCCTGTT+TGG | + | chr6.2:6137399-6137418 | None:intergenic | 45.0% | |
| GCCGCAATATTTACTCAGAC+AGG | - | chr6.2:6137539-6137558 | MS.gene031018:intron | 45.0% | |
| GGCATCATGGTTACAAAGAG+AGG | + | chr6.2:6132901-6132920 | None:intergenic | 45.0% | |
| GGTCCACTTCTGAATTCGAA+AGG | - | chr6.2:6137497-6137516 | MS.gene031018:intron | 45.0% | |
| GTTGAGACTCGTACGGATAA+TGG | - | chr6.2:6136594-6136613 | MS.gene031018:intron | 45.0% | |
| TAATGTGACTGGTGTGGTTG+AGG | - | chr6.2:6135803-6135822 | MS.gene031018:intron | 45.0% | |
| TAGTGTGACTCTAATAGCGG+AGG | - | chr6.2:6137476-6137495 | MS.gene031018:intron | 45.0% | |
| TAGTTTCTCGAGACGTCACT+TGG | - | chr6.2:6133562-6133581 | MS.gene031018:CDS | 45.0% | |
| TCACTAGCAACCTTACTTGG+TGG | + | chr6.2:6136462-6136481 | None:intergenic | 45.0% | |
| TCCAACAAGACGCGTGTTAA+TGG | - | chr6.2:6134404-6134423 | MS.gene031018:intron | 45.0% | |
| TGAAAAGTTGAAGCTGCCTG+TGG | - | chr6.2:6138818-6138837 | MS.gene031018:CDS | 45.0% | |
| TGGTAGAGCGATAAGAGTTC+TGG | - | chr6.2:6135100-6135119 | MS.gene031018:intron | 45.0% | |
| TTCGGTAAAAGAAGGCTCAC+AGG | + | chr6.2:6138301-6138320 | None:intergenic | 45.0% | |
| TTTGATCACACCCTCACAGT+TGG | - | chr6.2:6136941-6136960 | MS.gene031018:intron | 45.0% | |
| ! | AGCACCATTAAAAGCGTGTC+CGG | + | chr6.2:6137909-6137928 | None:intergenic | 45.0% |
| ! | GATTTGTTCGCCACCAAGTA+AGG | - | chr6.2:6136449-6136468 | MS.gene031018:intron | 45.0% |
| ! | GGAGTAGTTTGGGATGAAGA+GGG | - | chr6.2:6135980-6135999 | MS.gene031018:intron | 45.0% |
| ! | TGGAGTAGTTTGGGATGAAG+AGG | - | chr6.2:6135979-6135998 | MS.gene031018:intron | 45.0% |
| !! | GAAATGGCTCTGGAGTAGTT+TGG | - | chr6.2:6135969-6135988 | MS.gene031018:intron | 45.0% |
| !! | TATACTTGGTGCGTGCTATG+GGG | + | chr6.2:6134755-6134774 | None:intergenic | 45.0% |
| ACTCCAGAGCCATTTCCTTC+AGG | + | chr6.2:6135965-6135984 | None:intergenic | 50.0% | |
| CAGCCATAAATCCCGGAAAC+AGG | - | chr6.2:6137038-6137057 | MS.gene031018:intron | 50.0% | |
| CCAAAGACCACGAGATTGAG+GGG | + | chr6.2:6133599-6133618 | None:intergenic | 50.0% | |
| CCTCCCAGGACGTTATTTGT+CGG | + | chr6.2:6136779-6136798 | None:intergenic | 50.0% | |
| CGGCAGATTCCTGAAGGAAA+TGG | - | chr6.2:6135953-6135972 | MS.gene031018:intron | 50.0% | |
| CGTCCCCAACTTAATGTGAC+TGG | - | chr6.2:6135792-6135811 | MS.gene031018:intron | 50.0% | |
| CTCGGAAGAAAACACAGGAG+GGG | + | chr6.2:6135290-6135309 | None:intergenic | 50.0% | |
| CTCTGTTCCTCAAGTACCAC+AGG | + | chr6.2:6138837-6138856 | None:intergenic | 50.0% | |
| CTGAGGAACGATTCGACGTA+CGG | + | chr6.2:6137819-6137838 | None:intergenic | 50.0% | |
| CTTACCTCTGCAGGAAAGAG+TGG | + | chr6.2:6135313-6135332 | None:intergenic | 50.0% | |
| CTTTCGAGAAACCCAAGCTC+CGG | - | chr6.2:6136222-6136241 | MS.gene031018:intron | 50.0% | |
| GAAAGTCGGGCAGCAATGTT+TGG | - | chr6.2:6136898-6136917 | MS.gene031018:intron | 50.0% | |
| GAACTTGGGCCCCTTTGAAT+TGG | + | chr6.2:6134102-6134121 | None:intergenic | 50.0% | |
| GAGCAGAGGAGAGTTGTTGA+AGG | - | chr6.2:6138740-6138759 | MS.gene031018:CDS | 50.0% | |
| GCCATTAACACGCGTCTTGT+TGG | + | chr6.2:6134408-6134427 | None:intergenic | 50.0% | |
| GCTCGGAAGAAAACACAGGA+GGG | + | chr6.2:6135291-6135310 | None:intergenic | 50.0% | |
| GGACTAAATCCCACTGCAAG+AGG | - | chr6.2:6138223-6138242 | MS.gene031018:intron | 50.0% | |
| GGTATTGCAGGAACTTCAGC+TGG | - | chr6.2:6137767-6137786 | MS.gene031018:intron | 50.0% | |
| TCATACCGGCAGATTCCTGA+AGG | - | chr6.2:6135947-6135966 | MS.gene031018:intron | 50.0% | |
| TCTTGGTAGGTCAAGAGCAG+AGG | - | chr6.2:6138726-6138745 | MS.gene031018:CDS | 50.0% | |
| ! | AGTCGTCGTCTCTGAAAGTC+GGG | - | chr6.2:6136885-6136904 | MS.gene031018:intron | 50.0% |
| ! | AGTGGCTCGGAAGAAAACAC+AGG | + | chr6.2:6135295-6135314 | None:intergenic | 50.0% |
| ! | ATTCTAGCATCGGAAGGGTG+AGG | - | chr6.2:6136267-6136286 | MS.gene031018:intron | 50.0% |
| ! | GACTCCGGACACGCTTTTAA+TGG | - | chr6.2:6137902-6137921 | MS.gene031018:intron | 50.0% |
| ! | GAGTCGTCGTCTCTGAAAGT+CGG | - | chr6.2:6136884-6136903 | MS.gene031018:intron | 50.0% |
| ! | GCCTCCTCTTTTGTCCATTG+TGG | - | chr6.2:6135345-6135364 | MS.gene031018:intron | 50.0% |
| ACCAGCAAAGCCTCTTGCAG+TGG | + | chr6.2:6138236-6138255 | None:intergenic | 55.0% | |
| CAACAACCTGACCGGAGCTT+GGG | + | chr6.2:6136236-6136255 | None:intergenic | 55.0% | |
| CCAGCAAAGCCTCTTGCAGT+GGG | + | chr6.2:6138235-6138254 | None:intergenic | 55.0% | |
| CCCCTCAATCTCGTGGTCTT+TGG | - | chr6.2:6133596-6133615 | MS.gene031018:CDS | 55.0% | |
| CCGACAAATAACGTCCTGGG+AGG | - | chr6.2:6136776-6136795 | MS.gene031018:intron | 55.0% | |
| CGTATCACCCCTCAATCTCG+TGG | - | chr6.2:6133589-6133608 | MS.gene031018:CDS | 55.0% | |
| CTCTGCAGGAAAGAGTGGCT+CGG | + | chr6.2:6135308-6135327 | None:intergenic | 55.0% | |
| GAAGCTGCCTGTGGTACTTG+AGG | - | chr6.2:6138827-6138846 | MS.gene031018:CDS | 55.0% | |
| GACGACTCCCCCACATTGAT+TGG | + | chr6.2:6136872-6136891 | None:intergenic | 55.0% | |
| GCAGGAACTTCAGCTGGTGT+AGG | - | chr6.2:6137773-6137792 | MS.gene031018:intron | 55.0% | |
| GGCTCGGAAGAAAACACAGG+AGG | + | chr6.2:6135292-6135311 | None:intergenic | 55.0% | |
| GGGCAGCAATGTTTGGCCAT+TGG | - | chr6.2:6136905-6136924 | MS.gene031018:intron | 55.0% | |
| !! | GTTGAGGAGGAAGGGCATCA+TGG | + | chr6.2:6132914-6132933 | None:intergenic | 55.0% |
| CATCGGAAGGGTGAGGCTCA+AGG | - | chr6.2:6136274-6136293 | MS.gene031018:intron | 60.0% | |
| CCCACTGCAAGAGGCTTTGC+TGG | - | chr6.2:6138232-6138251 | MS.gene031018:intron | 60.0% | |
| CGAGCCACTCTTTCCTGCAG+AGG | - | chr6.2:6135306-6135325 | MS.gene031018:intron | 60.0% | |
| GAGAAACCCAAGCTCCGGTC+AGG | - | chr6.2:6136227-6136246 | MS.gene031018:intron | 60.0% | |
| GCAACAACCTGACCGGAGCT+TGG | + | chr6.2:6136237-6136256 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 6132789 | 6138863 | 6132789 | ID=MS.gene031018 |
| chr6.2 | mRNA | 6132789 | 6138863 | 6132789 | ID=MS.gene031018.t1;Parent=MS.gene031018 |
| chr6.2 | exon | 6138697 | 6138863 | 6138697 | ID=MS.gene031018.t1.exon1;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6138697 | 6138863 | 6138697 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6137178 | 6137305 | 6137178 | ID=MS.gene031018.t1.exon2;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6137178 | 6137305 | 6137178 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6136325 | 6136407 | 6136325 | ID=MS.gene031018.t1.exon3;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6136325 | 6136407 | 6136325 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6135828 | 6135926 | 6135828 | ID=MS.gene031018.t1.exon4;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6135828 | 6135926 | 6135828 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6135627 | 6135693 | 6135627 | ID=MS.gene031018.t1.exon5;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6135627 | 6135693 | 6135627 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6135369 | 6135444 | 6135369 | ID=MS.gene031018.t1.exon6;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6135369 | 6135444 | 6135369 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6135228 | 6135294 | 6135228 | ID=MS.gene031018.t1.exon7;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6135228 | 6135294 | 6135228 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6134593 | 6134810 | 6134593 | ID=MS.gene031018.t1.exon8;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6134593 | 6134810 | 6134593 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6134092 | 6134159 | 6134092 | ID=MS.gene031018.t1.exon9;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6134092 | 6134159 | 6134092 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6133796 | 6133875 | 6133796 | ID=MS.gene031018.t1.exon10;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6133796 | 6133875 | 6133796 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6133559 | 6133645 | 6133559 | ID=MS.gene031018.t1.exon11;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6133559 | 6133645 | 6133559 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6133352 | 6133459 | 6133352 | ID=MS.gene031018.t1.exon12;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6133352 | 6133459 | 6133352 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| chr6.2 | exon | 6132789 | 6132917 | 6132789 | ID=MS.gene031018.t1.exon13;Parent=MS.gene031018.t1 |
| chr6.2 | CDS | 6132789 | 6132917 | 6132789 | ID=cds.MS.gene031018.t1;Parent=MS.gene031018.t1 |
| Gene Sequence |
| Protein sequence |
