Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031751.t1 | XP_013456629.1 | 98.5 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 1.40E-170 | 609 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031751.t1 | Q9FNY2 | 67.1 | 289 | 61 | 5 | 87 | 342 | 98 | 385 | 1.8e-94 | 347.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031751.t1 | A0A072UXQ9 | 98.5 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 9.8e-171 | 609.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene031751.t1 | TF | E2F-DP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041917 | MS.gene031751 | PPI |
| MS.gene09552 | MS.gene031751 | PPI |
| MS.gene031751 | MS.gene44510 | PPI |
| MS.gene011754 | MS.gene031751 | PPI |
| MS.gene031751 | MS.gene015212 | PPI |
| MS.gene031751 | MS.gene015213 | PPI |
| MS.gene031751 | MS.gene81646 | PPI |
| MS.gene09551 | MS.gene031751 | PPI |
| MS.gene031751 | MS.gene91416 | PPI |
| MS.gene92318 | MS.gene031751 | PPI |
| MS.gene014301 | MS.gene031751 | PPI |
| MS.gene000128 | MS.gene031751 | PPI |
| MS.gene99648 | MS.gene031751 | PPI |
| MS.gene94307 | MS.gene031751 | PPI |
| MS.gene070538 | MS.gene031751 | PPI |
| MS.gene98552 | MS.gene031751 | PPI |
| MS.gene031751 | MS.gene94315 | PPI |
| MS.gene031751 | MS.gene20252 | PPI |
| MS.gene031751 | MS.gene069975 | PPI |
| MS.gene016712 | MS.gene031751 | PPI |
| MS.gene031751 | MS.gene024895 | PPI |
| MS.gene20253 | MS.gene031751 | PPI |
| MS.gene064876 | MS.gene031751 | PPI |
| MS.gene66836 | MS.gene031751 | PPI |
| MS.gene57177 | MS.gene031751 | PPI |
| MS.gene57178 | MS.gene031751 | PPI |
| MS.gene031751 | MS.gene80094 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031751.t1 | MTR_4g077797 | 98.830 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 0.0 | 698 |
| MS.gene031751.t1 | MTR_4g077803 | 84.682 | 346 | 47 | 3 | 1 | 342 | 1 | 344 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031751.t1 | AT5G03415 | 63.788 | 359 | 92 | 8 | 21 | 342 | 28 | 385 | 5.51e-147 | 420 |
| MS.gene031751.t1 | AT5G03415 | 61.838 | 359 | 93 | 9 | 21 | 342 | 28 | 379 | 6.23e-139 | 399 |
| MS.gene031751.t1 | AT5G02470 | 51.835 | 218 | 96 | 3 | 63 | 279 | 32 | 241 | 3.39e-76 | 236 |
| MS.gene031751.t1 | AT5G02470 | 51.835 | 218 | 96 | 3 | 63 | 279 | 32 | 241 | 3.39e-76 | 236 |
| MS.gene031751.t1 | AT5G02470 | 51.835 | 218 | 96 | 3 | 63 | 279 | 32 | 241 | 3.39e-76 | 236 |
Find 87 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCAAGGCAATGGATTT+TGG | 0.207282 | 4.3:-31093168 | MS.gene031751:CDS |
| TCCACTCCCTGGAATATTAA+AGG | 0.271571 | 4.3:-31093007 | MS.gene031751:CDS |
| TATTATTGCTACAAGTTTGT+AGG | 0.286595 | 4.3:-31094159 | MS.gene031751:intron |
| ATTGTTCATTTCGTTGAATA+AGG | 0.299922 | 4.3:+31094127 | None:intergenic |
| TATACCTGAACCAGAATAAA+AGG | 0.312486 | 4.3:+31094063 | None:intergenic |
| ACTCTTGCCTTTAATATTCC+AGG | 0.333887 | 4.3:+31093000 | None:intergenic |
| TGATGCTCTGAATGTTCTTA+TGG | 0.333958 | 4.3:-31094578 | MS.gene031751:CDS |
| AACCTTTCATACTAAATTGC+CGG | 0.339281 | 4.3:+31095813 | None:intergenic |
| TCCTGCTCGTTGAGCCTGAT+TGG | 0.340052 | 4.3:+31096789 | None:intergenic |
| CAGTTTCAAACATGTTAGTT+AGG | 0.354238 | 4.3:-31093044 | MS.gene031751:CDS |
| GAAGATAAGAAAACCTGATC+AGG | 0.380867 | 4.3:+31094731 | None:intergenic |
| CGAAGAGGATGAGGAATTGA+TGG | 0.384755 | 4.3:-31096834 | MS.gene031751:CDS |
| GGTTGCGGAACTACGATTTC+CGG | 0.384781 | 4.3:-31096812 | MS.gene031751:CDS |
| AGACACAGCGTCTCGGGCTT+AGG | 0.417313 | 4.3:-31094371 | MS.gene031751:CDS |
| ACTACGATTTCCGGCCAATC+AGG | 0.431678 | 4.3:-31096803 | MS.gene031751:CDS |
| GGCTCAACGAGCAGGAGTGC+CGG | 0.432075 | 4.3:-31096782 | MS.gene031751:CDS |
| GCCTTTAATATTCCAGGGAG+TGG | 0.432840 | 4.3:+31093006 | None:intergenic |
| GTCTGCTCACTCCGGCTAGA+TGG | 0.433095 | 4.3:+31096755 | None:intergenic |
| TCCTCATGCAACTGTGGAAG+TGG | 0.457569 | 4.3:-31093537 | MS.gene031751:CDS |
| GCCAATCAGGCTCAACGAGC+AGG | 0.466675 | 4.3:-31096790 | MS.gene031751:CDS |
| GGGGAAGGTTCTAGCATGTC+AGG | 0.468504 | 4.3:-31093093 | MS.gene031751:CDS |
| AGACTCACGCAACTACTGCC+TGG | 0.468595 | 4.3:+31096657 | None:intergenic |
| TTAAATAGACACAGCGTCTC+GGG | 0.473048 | 4.3:-31094377 | MS.gene031751:intron |
| GGCTATGAATATTATTTCCA+AGG | 0.477616 | 4.3:-31094557 | MS.gene031751:CDS |
| AGGTAAAGATACACCTCCAC+TGG | 0.479385 | 4.3:+31094083 | None:intergenic |
| CTGCTCAAGCTCCTGCAGAT+AGG | 0.480130 | 4.3:+31094326 | None:intergenic |
| GAGTGATATTGAAGAACTAA+AGG | 0.483152 | 4.3:-31094491 | MS.gene031751:intron |
| TTCCTCATCCTCTTCGTCCA+CGG | 0.484217 | 4.3:+31096841 | None:intergenic |
| GTCCGTGGACGAAGAGGATG+AGG | 0.484659 | 4.3:-31096843 | MS.gene031751:CDS |
| GCTCAACGAGCAGGAGTGCC+GGG | 0.485828 | 4.3:-31096781 | MS.gene031751:CDS |
| CTCCGGCAATTTAGTATGAA+AGG | 0.485877 | 4.3:-31095815 | MS.gene031751:intron |
| GCTCGTTGAGCCTGATTGGC+CGG | 0.490544 | 4.3:+31096793 | None:intergenic |
| AATGAACAATTATATAGCTC+AGG | 0.501710 | 4.3:-31094114 | MS.gene031751:CDS |
| AGCCGGAGTGAGCAGACCAC+GGG | 0.509849 | 4.3:-31096749 | MS.gene031751:CDS |
| GACTCACGCAACTACTGCCT+GGG | 0.512394 | 4.3:+31096658 | None:intergenic |
| ATAAGAATGGAAGAGGGCTC+CGG | 0.512718 | 4.3:-31095832 | MS.gene031751:CDS |
| CTCTTGCCTTTAATATTCCA+GGG | 0.515553 | 4.3:+31093001 | None:intergenic |
| TGTGAGAAGGTAGAAAGTAA+AGG | 0.516897 | 4.3:-31095302 | MS.gene031751:CDS |
| TGATGACGATGCTGCTTCCC+AGG | 0.519370 | 4.3:-31096675 | MS.gene031751:CDS |
| ATTAAATAGACACAGCGTCT+CGG | 0.524578 | 4.3:-31094378 | MS.gene031751:intron |
| CAATTATGTTCTCAAGGCAA+TGG | 0.525211 | 4.3:-31093175 | MS.gene031751:CDS |
| GATGAGGAATTGATGGGTTG+CGG | 0.526792 | 4.3:-31096827 | MS.gene031751:CDS |
| CCGACATCACCTCCACTCCC+TGG | 0.527073 | 4.3:-31093018 | MS.gene031751:CDS |
| GTCAGGCATGTATCAATCAC+AGG | 0.555543 | 4.3:-31093076 | MS.gene031751:CDS |
| TTGTCGTCATGCAGCTCGAA+AGG | 0.559999 | 4.3:+31093195 | None:intergenic |
| CACACAATATTGCGGATGGA+GGG | 0.564114 | 4.3:-31093113 | MS.gene031751:CDS |
| TTTAATATTCCAGGGAGTGG+AGG | 0.566833 | 4.3:+31093009 | None:intergenic |
| TTTGAGAGCAGCGTTATCAC+CGG | 0.570401 | 4.3:+31096718 | None:intergenic |
| CAGACCACGGGGACAGCCGC+CGG | 0.573222 | 4.3:-31096737 | MS.gene031751:CDS |
| AAGATAAGAAAACCTGATCA+GGG | 0.573520 | 4.3:+31094732 | None:intergenic |
| AAGGAAAGCAGCCTATCTGC+AGG | 0.574961 | 4.3:-31094337 | MS.gene031751:CDS |
| AATATTGCGGATGGAGGGGA+AGG | 0.575401 | 4.3:-31093108 | MS.gene031751:CDS |
| TTCTTCAATATCACTCAGAC+TGG | 0.575701 | 4.3:+31094498 | None:intergenic |
| CCAGGGAGTGGAGGTGATGT+CGG | 0.580031 | 4.3:+31093018 | None:intergenic |
| ACACAATATTGCGGATGGAG+GGG | 0.585147 | 4.3:-31093112 | MS.gene031751:CDS |
| GTGCCGGGTTACCATCTAGC+CGG | 0.591553 | 4.3:-31096766 | MS.gene031751:CDS |
| GGCTTAGGAGTAGAATTGAA+AGG | 0.596362 | 4.3:-31094356 | MS.gene031751:CDS |
| TCCCCGTGGTCTGCTCACTC+CGG | 0.599110 | 4.3:+31096747 | None:intergenic |
| ACACACAATATTGCGGATGG+AGG | 0.602906 | 4.3:-31093114 | MS.gene031751:CDS |
| GAAGAGGATGAGGAATTGAT+GGG | 0.607086 | 4.3:-31096833 | MS.gene031751:CDS |
| TGACGACAATTATGTTCTCA+AGG | 0.607641 | 4.3:-31093181 | MS.gene031751:CDS |
| TCCACTTCCACAGTTGCATG+AGG | 0.608745 | 4.3:+31093536 | None:intergenic |
| GTTACACACAATATTGCGGA+TGG | 0.615879 | 4.3:-31093117 | MS.gene031751:CDS |
| TAGCCGGAGTGAGCAGACCA+CGG | 0.622633 | 4.3:-31096750 | MS.gene031751:CDS |
| TCAATCGTCCGTGGACGAAG+AGG | 0.627914 | 4.3:-31096849 | MS.gene031751:CDS |
| GGGAGTGGAGGTGATGTCGG+AGG | 0.628434 | 4.3:+31093021 | None:intergenic |
| CAATGTTACACACAATATTG+CGG | 0.641067 | 4.3:-31093121 | MS.gene031751:CDS |
| GATAAGAAAACCTGATCAGG+GGG | 0.641366 | 4.3:+31094734 | None:intergenic |
| TCAGGAAATCCTCCCAGTGG+AGG | 0.644133 | 4.3:-31094096 | MS.gene031751:CDS |
| GACACGTCCTCATGCAACTG+TGG | 0.649899 | 4.3:-31093543 | MS.gene031751:CDS |
| TGTGTAACATTGTCACTCTG+TGG | 0.651492 | 4.3:+31093132 | None:intergenic |
| ATCACCGGCGGCTGTCCCCG+TGG | 0.656058 | 4.3:+31096733 | None:intergenic |
| AGGAAGAACAACTTACAATG+AGG | 0.663086 | 4.3:-31095282 | MS.gene031751:intron |
| GAGCATCATAGACCCTTCGA+CGG | 0.678223 | 4.3:+31094593 | None:intergenic |
| GGTAAAGATACACCTCCACT+GGG | 0.679973 | 4.3:+31094084 | None:intergenic |
| AGCTCAGGAAATCCTCCCAG+TGG | 0.682103 | 4.3:-31094099 | MS.gene031751:CDS |
| AGATAAGAAAACCTGATCAG+GGG | 0.682385 | 4.3:+31094733 | None:intergenic |
| GCAGCCGCATCAATCGTCCG+TGG | 0.683605 | 4.3:-31096858 | MS.gene031751:CDS |
| ATAGGTGGCAGATGAACTTG+TGG | 0.689893 | 4.3:-31094789 | MS.gene031751:intron |
| AACATGTTTGAAACTGACTG+AGG | 0.695881 | 4.3:+31093051 | None:intergenic |
| TCGTCCACGGACGATTGATG+CGG | 0.696336 | 4.3:+31096854 | None:intergenic |
| GAGAGCAGCGTTATCACCGG+CGG | 0.697043 | 4.3:+31096721 | None:intergenic |
| ACTCCGGCTAGATGGTAACC+CGG | 0.712354 | 4.3:+31096763 | None:intergenic |
| GGGGTGATAAGAATGGAAGA+GGG | 0.716134 | 4.3:-31095838 | MS.gene031751:CDS |
| AAAGATACACCTCCACTGGG+AGG | 0.724160 | 4.3:+31094087 | None:intergenic |
| ATATCACTCAGACTGGTACG+AGG | 0.734989 | 4.3:+31094505 | None:intergenic |
| GCCGGAGTGAGCAGACCACG+GGG | 0.739516 | 4.3:-31096748 | MS.gene031751:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTAAATAT+AGG | - | chr4.3:31095043-31095062 | MS.gene031751:intron | 0.0% |
| !! | AAGTATAGATATAAATAAAA+AGG | + | chr4.3:31093871-31093890 | None:intergenic | 10.0% |
| !! | GAAAAAAAATATAAGTAATA+CGG | + | chr4.3:31094971-31094990 | None:intergenic | 10.0% |
| !!! | AAAAGAAAGAAATTTTTTTT+AGG | + | chr4.3:31095016-31095035 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATATAGG+TGG | - | chr4.3:31095046-31095065 | MS.gene031751:intron | 10.0% |
| !! | AAATTAATTAGTGGTTAATT+TGG | - | chr4.3:31093728-31093747 | MS.gene031751:intron | 15.0% |
| !! | CTATTTAAAAAACTAATTGA+AGG | + | chr4.3:31094819-31094838 | None:intergenic | 15.0% |
| !! | TTATTTATATCTATACTTTG+TGG | - | chr4.3:31093873-31093892 | MS.gene031751:intron | 15.0% |
| !! | TTCTATAAATATATACATGT+TGG | - | chr4.3:31094741-31094760 | MS.gene031751:intron | 15.0% |
| !!! | AAATAATTTTCCCTTTTTTT+GGG | - | chr4.3:31096026-31096045 | MS.gene031751:intron | 15.0% |
| !!! | ATCTTATGAACTTATTTTTT+TGG | - | chr4.3:31095192-31095211 | MS.gene031751:intron | 15.0% |
| !!! | CTTCAATTAGTTTTTTAAAT+AGG | - | chr4.3:31094817-31094836 | MS.gene031751:intron | 15.0% |
| !!! | GAAATTTTTTTTAGGAAATA+AGG | + | chr4.3:31095008-31095027 | None:intergenic | 15.0% |
| !!! | TCTTATGAACTTATTTTTTT+GGG | - | chr4.3:31095193-31095212 | MS.gene031751:intron | 15.0% |
| !! | AAAAAAGAAATACAATGGAA+GGG | - | chr4.3:31095318-31095337 | MS.gene031751:intron | 20.0% |
| !! | AATTAACCACTAATTAATTC+AGG | + | chr4.3:31093627-31093646 | None:intergenic | 20.0% |
| !! | AATTTAAAAAATAGCAATCC+AGG | + | chr4.3:31095596-31095615 | None:intergenic | 20.0% |
| !! | AGGATAAAAAAGAAATACAA+TGG | - | chr4.3:31095313-31095332 | MS.gene031751:intron | 20.0% |
| !! | ATGTAATATATTATCATCCA+AGG | + | chr4.3:31095876-31095895 | None:intergenic | 20.0% |
| !! | GAATTAATTAGTGGTTAATT+TGG | - | chr4.3:31093627-31093646 | MS.gene031751:intron | 20.0% |
| !! | TAAAAAAGAAATACAATGGA+AGG | - | chr4.3:31095317-31095336 | MS.gene031751:intron | 20.0% |
| !! | TAAAAAGTTAAAGATCAAAG+TGG | + | chr4.3:31094082-31094101 | None:intergenic | 20.0% |
| !! | TAAGAATCAATCGAAAATAA+TGG | + | chr4.3:31093943-31093962 | None:intergenic | 20.0% |
| !! | TTAAAACCTGAATTAATTAG+TGG | - | chr4.3:31093618-31093637 | MS.gene031751:intron | 20.0% |
| !! | TTCATTGCAAAATTAATTAG+TGG | - | chr4.3:31093719-31093738 | MS.gene031751:intron | 20.0% |
| !! | TTTATTCAAGGTCTAAAAAA+TGG | - | chr4.3:31093463-31093482 | MS.gene031751:intron | 20.0% |
| !!! | AAAAAACTGGTTTAAAGTAA+AGG | + | chr4.3:31094599-31094618 | None:intergenic | 20.0% |
| !!! | AAGATTTTCAATTAGTGAAA+AGG | - | chr4.3:31093388-31093407 | MS.gene031751:intron | 20.0% |
| !!! | CTTATGAACTTATTTTTTTG+GGG | - | chr4.3:31095194-31095213 | MS.gene031751:intron | 20.0% |
| !!! | GAAATAATTTTCCCTTTTTT+TGG | - | chr4.3:31096025-31096044 | MS.gene031751:intron | 20.0% |
| !!! | TATTTGCTATTTACACATTA+AGG | - | chr4.3:31095159-31095178 | MS.gene031751:intron | 20.0% |
| !!! | TTGTATTTCTTTTTTATCCT+TGG | + | chr4.3:31095313-31095332 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | - | chr4.3:31096357-31096376 | MS.gene031751:intron | 20.0% |
| ! | AAATCAACAGTAAATTAGAG+AGG | + | chr4.3:31094519-31094538 | None:intergenic | 25.0% |
| ! | AATAAAAACAGAGAATTGAC+AGG | + | chr4.3:31093909-31093928 | None:intergenic | 25.0% |
| ! | AATCAAATATCAGAACCAAT+AGG | + | chr4.3:31096263-31096282 | None:intergenic | 25.0% |
| ! | AATCAACAGTAAATTAGAGA+GGG | + | chr4.3:31094518-31094537 | None:intergenic | 25.0% |
| ! | AATGAACAATTATATAGCTC+AGG | - | chr4.3:31095736-31095755 | MS.gene031751:intron | 25.0% |
| ! | AATTGAACAACAATTTCTAC+TGG | + | chr4.3:31095850-31095869 | None:intergenic | 25.0% |
| ! | AGAGAGTAAACATAAATAAG+TGG | + | chr4.3:31096625-31096644 | None:intergenic | 25.0% |
| ! | ATAACATAGACCCATAAAAT+AGG | + | chr4.3:31096143-31096162 | None:intergenic | 25.0% |
| ! | ATATTGAAGAACTAAAGGTT+TGG | - | chr4.3:31095364-31095383 | MS.gene031751:intron | 25.0% |
| ! | ATTACATGAACATAAGTAGT+TGG | - | chr4.3:31095920-31095939 | MS.gene031751:intron | 25.0% |
| ! | ATTGTTCATTTCGTTGAATA+AGG | + | chr4.3:31095726-31095745 | None:intergenic | 25.0% |
| ! | CTTTATGATACCACAAAATT+AGG | + | chr4.3:31096468-31096487 | None:intergenic | 25.0% |
| ! | GATAAATCACAACATGAAAT+GGG | + | chr4.3:31094942-31094961 | None:intergenic | 25.0% |
| ! | GGTATTAAATCAATTAGAGT+GGG | + | chr4.3:31095563-31095582 | None:intergenic | 25.0% |
| ! | GTAGAGAAAATTGTCAAAAA+TGG | + | chr4.3:31094479-31094498 | None:intergenic | 25.0% |
| ! | TAAACATTTGTGTTAAGGTT+TGG | - | chr4.3:31094173-31094192 | MS.gene031751:intron | 25.0% |
| ! | TAGTATATAGCAGTAACTTT+CGG | + | chr4.3:31096073-31096092 | None:intergenic | 25.0% |
| ! | TATAAATCCGATTTCATGTT+TGG | - | chr4.3:31093281-31093300 | MS.gene031751:intron | 25.0% |
| ! | TATTATTGCTACAAGTTTGT+AGG | - | chr4.3:31095691-31095710 | MS.gene031751:intron | 25.0% |
| ! | TGAAAAGGAAAATGATATAC+TGG | - | chr4.3:31093403-31093422 | MS.gene031751:intron | 25.0% |
| ! | TGACATAAACATTTGTGTTA+AGG | - | chr4.3:31094168-31094187 | MS.gene031751:intron | 25.0% |
| ! | TGATAAATCACAACATGAAA+TGG | + | chr4.3:31094943-31094962 | None:intergenic | 25.0% |
| !! | ATTTTATGGGTCTATGTTAT+GGG | - | chr4.3:31096143-31096162 | MS.gene031751:intron | 25.0% |
| !! | CAAATAAGTTGTTTCAAACA+AGG | + | chr4.3:31094142-31094161 | None:intergenic | 25.0% |
| !! | CACTCTAATTGATTTAATAC+CGG | - | chr4.3:31095562-31095581 | MS.gene031751:intron | 25.0% |
| !! | TATTTTATGGGTCTATGTTA+TGG | - | chr4.3:31096142-31096161 | MS.gene031751:intron | 25.0% |
| !! | TGTATCTTTACCTTTTATTC+TGG | - | chr4.3:31095777-31095796 | MS.gene031751:intron | 25.0% |
| !!! | AATAAAAAGGTTTTGAATCG+TGG | + | chr4.3:31093858-31093877 | None:intergenic | 25.0% |
| !!! | AGACTTTATATTTTAGAACG+TGG | + | chr4.3:31094699-31094718 | None:intergenic | 25.0% |
| !!! | ATGCGTTCAATTTTGATTTA+GGG | - | chr4.3:31093353-31093372 | MS.gene031751:intron | 25.0% |
| !!! | GACAGAGATTTATTTTATTC+AGG | - | chr4.3:31094453-31094472 | MS.gene031751:intron | 25.0% |
| !!! | TGACAATTTTCTCTACTTTT+TGG | - | chr4.3:31094483-31094502 | MS.gene031751:intron | 25.0% |
| AACATAGTGAACAAACGTTA+TGG | - | chr4.3:31093516-31093535 | MS.gene031751:CDS | 30.0% | |
| AACCTTTCATACTAAATTGC+CGG | + | chr4.3:31094040-31094059 | None:intergenic | 30.0% | |
| AAGATAAGAAAACCTGATCA+GGG | + | chr4.3:31095121-31095140 | None:intergenic | 30.0% | |
| AGCTAAACCAAACATGAAAT+CGG | + | chr4.3:31093291-31093310 | None:intergenic | 30.0% | |
| AGGAAGTCTAAACATTAAGA+CGG | + | chr4.3:31096448-31096467 | None:intergenic | 30.0% | |
| AGTTACTGCTATATACTAGA+TGG | - | chr4.3:31096075-31096094 | MS.gene031751:intron | 30.0% | |
| ATCAACAGTAAATTAGAGAG+GGG | + | chr4.3:31094517-31094536 | None:intergenic | 30.0% | |
| CAAACAAATGCCCAAAAAAA+GGG | + | chr4.3:31096039-31096058 | None:intergenic | 30.0% | |
| CAATGTTACACACAATATTG+CGG | - | chr4.3:31096729-31096748 | MS.gene031751:CDS | 30.0% | |
| CAGTTTCAAACATGTTAGTT+AGG | - | chr4.3:31096806-31096825 | MS.gene031751:CDS | 30.0% | |
| CGGTATTAAATCAATTAGAG+TGG | + | chr4.3:31095564-31095583 | None:intergenic | 30.0% | |
| GAGTGATATTGAAGAACTAA+AGG | - | chr4.3:31095359-31095378 | MS.gene031751:intron | 30.0% | |
| GGCTATGAATATTATTTCCA+AGG | - | chr4.3:31095293-31095312 | MS.gene031751:CDS | 30.0% | |
| GTCTATGTTATGGGTTTATA+CGG | - | chr4.3:31096152-31096171 | MS.gene031751:intron | 30.0% | |
| TATACCTGAACCAGAATAAA+AGG | + | chr4.3:31095790-31095809 | None:intergenic | 30.0% | |
| TCTAAAAAATGGTCCGTTAT+AGG | - | chr4.3:31093474-31093493 | MS.gene031751:intron | 30.0% | |
| TTGTTCTATACCAATTACCA+TGG | + | chr4.3:31093548-31093567 | None:intergenic | 30.0% | |
| TTTCATGAATTTGGCTGTTA+CGG | + | chr4.3:31093823-31093842 | None:intergenic | 30.0% | |
| ! | ATTGTTGTTCAATTATGCCT+TGG | - | chr4.3:31095856-31095875 | MS.gene031751:CDS | 30.0% |
| ! | ATTTCATGTTTGGTTTAGCT+TGG | - | chr4.3:31093291-31093310 | MS.gene031751:intron | 30.0% |
| ! | CAGATAAATTTTCCAACACA+GGG | + | chr4.3:31096602-31096621 | None:intergenic | 30.0% |
| ! | CTTTTAACGTGGTAAAAAAC+TGG | + | chr4.3:31094612-31094631 | None:intergenic | 30.0% |
| ! | GCAATGAATTTTTCATAGAC+TGG | + | chr4.3:31093707-31093726 | None:intergenic | 30.0% |
| ! | GTTTAGACTTCCTAATTTTG+TGG | - | chr4.3:31096455-31096474 | MS.gene031751:intron | 30.0% |
| ! | GTTTTGTCAATGATTAAGCA+CGG | - | chr4.3:31094839-31094858 | MS.gene031751:intron | 30.0% |
| ! | TAATTATTAGCCTCAGAAAC+TGG | - | chr4.3:31094890-31094909 | MS.gene031751:intron | 30.0% |
| ! | TTTCATGTTTGGTTTAGCTT+GGG | - | chr4.3:31093292-31093311 | MS.gene031751:intron | 30.0% |
| !! | GTTATGATGTGATTAGCTTT+AGG | - | chr4.3:31096414-31096433 | MS.gene031751:intron | 30.0% |
| !!! | ATTTTCAAGTAGACAAGTCT+TGG | - | chr4.3:31096546-31096565 | MS.gene031751:intron | 30.0% |
| !!! | CAATTTTCTCTACTTTTTGG+TGG | - | chr4.3:31094486-31094505 | MS.gene031751:intron | 30.0% |
| !!! | CATGCGTTCAATTTTGATTT+AGG | - | chr4.3:31093352-31093371 | MS.gene031751:intron | 30.0% |
| !!! | TTTACCTTTTATTCTGGTTC+AGG | - | chr4.3:31095783-31095802 | MS.gene031751:intron | 30.0% |
| !!! | TTTTCAAGTAGACAAGTCTT+GGG | - | chr4.3:31096547-31096566 | MS.gene031751:intron | 30.0% |
| AACTCAGATAATGACAAGCA+AGG | + | chr4.3:31096397-31096416 | None:intergenic | 35.0% | |
| AATCACAACATGAAATGGGT+AGG | + | chr4.3:31094938-31094957 | None:intergenic | 35.0% | |
| ACTCTTGCCTTTAATATTCC+AGG | + | chr4.3:31096853-31096872 | None:intergenic | 35.0% | |
| AGAGTTTATGCATAAGCTCT+TGG | - | chr4.3:31094304-31094323 | MS.gene031751:intron | 35.0% | |
| AGATAAGAAAACCTGATCAG+GGG | + | chr4.3:31095120-31095139 | None:intergenic | 35.0% | |
| AGGAAGAACAACTTACAATG+AGG | - | chr4.3:31094568-31094587 | MS.gene031751:CDS | 35.0% | |
| ATGAACATAAGTAGTTGGCT+TGG | - | chr4.3:31095925-31095944 | MS.gene031751:intron | 35.0% | |
| ATTAAATAGACACAGCGTCT+CGG | - | chr4.3:31095472-31095491 | MS.gene031751:intron | 35.0% | |
| ATTGGAAGTAATGTATAGCC+AGG | + | chr4.3:31093436-31093455 | None:intergenic | 35.0% | |
| CAATTATGTTCTCAAGGCAA+TGG | - | chr4.3:31096675-31096694 | MS.gene031751:CDS | 35.0% | |
| CCAAACAAATGCCCAAAAAA+AGG | + | chr4.3:31096040-31096059 | None:intergenic | 35.0% | |
| CCTTGAATAAAATGCACCAT+TGG | + | chr4.3:31093454-31093473 | None:intergenic | 35.0% | |
| CGCTAAGGATTTCATGAATT+TGG | + | chr4.3:31093832-31093851 | None:intergenic | 35.0% | |
| CGCTATAGCATTTATTGAGT+TGG | + | chr4.3:31094670-31094689 | None:intergenic | 35.0% | |
| CTCTTGCCTTTAATATTCCA+GGG | + | chr4.3:31096852-31096871 | None:intergenic | 35.0% | |
| CTGGACAAAATGACCAAAAA+AGG | + | chr4.3:31095831-31095850 | None:intergenic | 35.0% | |
| GAAAATAGATCTTATCCAGC+TGG | - | chr4.3:31095987-31096006 | MS.gene031751:intron | 35.0% | |
| GAAACTAGTGTATCCTATTG+TGG | - | chr4.3:31096499-31096518 | MS.gene031751:intron | 35.0% | |
| GAACAACTTACAATGAGGTT+AGG | - | chr4.3:31094573-31094592 | MS.gene031751:CDS | 35.0% | |
| GAAGATAAGAAAACCTGATC+AGG | + | chr4.3:31095122-31095141 | None:intergenic | 35.0% | |
| GAATAATATGCTCATCCTGT+TGG | - | chr4.3:31096221-31096240 | MS.gene031751:intron | 35.0% | |
| GTATCAGACACTACCTATAA+CGG | + | chr4.3:31093490-31093509 | None:intergenic | 35.0% | |
| GTTATAGGTAGTGTCTGATA+CGG | - | chr4.3:31093489-31093508 | MS.gene031751:intron | 35.0% | |
| TAGTTAATTCACTAACCAGC+TGG | + | chr4.3:31096005-31096024 | None:intergenic | 35.0% | |
| TGACGACAATTATGTTCTCA+AGG | - | chr4.3:31096669-31096688 | MS.gene031751:CDS | 35.0% | |
| TGCTTCGATAAGTTATTGTG+AGG | + | chr4.3:31094236-31094255 | None:intergenic | 35.0% | |
| TGGCTATACATTACTTCCAA+TGG | - | chr4.3:31093435-31093454 | MS.gene031751:intron | 35.0% | |
| TGTGAGAAGGTAGAAAGTAA+AGG | - | chr4.3:31094548-31094567 | MS.gene031751:CDS | 35.0% | |
| TTAAATCAATTAGAGTGGGC+TGG | + | chr4.3:31095559-31095578 | None:intergenic | 35.0% | |
| TTAGATCAGAACATCACTGA+AGG | + | chr4.3:31095434-31095453 | None:intergenic | 35.0% | |
| TTCTTCAATATCACTCAGAC+TGG | + | chr4.3:31095355-31095374 | None:intergenic | 35.0% | |
| ! | AAAAGCACAGTTCTCAATCA+TGG | - | chr4.3:31094627-31094646 | MS.gene031751:intron | 35.0% |
| ! | AACATGTTTGAAACTGACTG+AGG | + | chr4.3:31096802-31096821 | None:intergenic | 35.0% |
| ! | AATCTAGAAAGTGCAGAGAT+TGG | + | chr4.3:31093222-31093241 | None:intergenic | 35.0% |
| ! | ACTCTGGTTGCCTATTTTAT+GGG | - | chr4.3:31096130-31096149 | MS.gene031751:intron | 35.0% |
| ! | ATACACTAGTTTCCACTTTC+CGG | + | chr4.3:31096492-31096511 | None:intergenic | 35.0% |
| ! | CCAATGGTGCATTTTATTCA+AGG | - | chr4.3:31093451-31093470 | MS.gene031751:intron | 35.0% |
| ! | GAATTTTCTGATCCAAGCAA+TGG | - | chr4.3:31095086-31095105 | MS.gene031751:intron | 35.0% |
| ! | GCAGATAAATTTTCCAACAC+AGG | + | chr4.3:31096603-31096622 | None:intergenic | 35.0% |
| ! | TACTCTGGTTGCCTATTTTA+TGG | - | chr4.3:31096129-31096148 | MS.gene031751:intron | 35.0% |
| ! | TCTGAGGCTAATAATTACCA+CGG | + | chr4.3:31094887-31094906 | None:intergenic | 35.0% |
| ! | TGATGCTCTGAATGTTCTTA+TGG | - | chr4.3:31095272-31095291 | MS.gene031751:intron | 35.0% |
| ! | TTGTTTAGTTCAGCTTACTC+TGG | - | chr4.3:31096114-31096133 | MS.gene031751:intron | 35.0% |
| ! | TTTTGTGGTATCATAAAGCC+CGG | - | chr4.3:31096470-31096489 | MS.gene031751:intron | 35.0% |
| !!! | ATCTCAGTATCTGCCTTTTT+TGG | - | chr4.3:31095815-31095834 | MS.gene031751:intron | 35.0% |
| !!! | ATTAAGCACGGTGGTTTTTT+GGG | - | chr4.3:31094851-31094870 | MS.gene031751:intron | 35.0% |
| !!! | CCTTTTTTTGGGCATTTGTT+TGG | - | chr4.3:31096037-31096056 | MS.gene031751:intron | 35.0% |
| AATTGTGAAACTTGCAGCAG+TGG | - | chr4.3:31094415-31094434 | MS.gene031751:intron | 40.0% | |
| ACTCAGCATTCAGCATACTA+AGG | + | chr4.3:31094384-31094403 | None:intergenic | 40.0% | |
| AGGATAAGTGCAACTTTGCA+AGG | + | chr4.3:31094122-31094141 | None:intergenic | 40.0% | |
| ATGAGAAAAACATCCGTCGA+AGG | - | chr4.3:31095244-31095263 | MS.gene031751:intron | 40.0% | |
| CTCAATCATGGATAGCAAAG+CGG | - | chr4.3:31094639-31094658 | MS.gene031751:intron | 40.0% | |
| CTCAGCATTCAGCATACTAA+GGG | + | chr4.3:31094383-31094402 | None:intergenic | 40.0% | |
| CTCCGGCAATTTAGTATGAA+AGG | - | chr4.3:31094035-31094054 | MS.gene031751:intron | 40.0% | |
| GAAGAGGATGAGGAATTGAT+GGG | - | chr4.3:31093017-31093036 | MS.gene031751:CDS | 40.0% | |
| GATAAGAAAACCTGATCAGG+GGG | + | chr4.3:31095119-31095138 | None:intergenic | 40.0% | |
| GGCTTAGGAGTAGAATTGAA+AGG | - | chr4.3:31095494-31095513 | MS.gene031751:intron | 40.0% | |
| GTACCAAGAAGAAAAAGCGA+CGG | - | chr4.3:31093982-31094001 | MS.gene031751:intron | 40.0% | |
| GTACTGCGTAAACATTGAGT+GGG | + | chr4.3:31093966-31093985 | None:intergenic | 40.0% | |
| GTGAACAAACGTTATGGAAG+CGG | - | chr4.3:31093522-31093541 | MS.gene031751:CDS | 40.0% | |
| GTTACACACAATATTGCGGA+TGG | - | chr4.3:31096733-31096752 | MS.gene031751:CDS | 40.0% | |
| TACCAAGAAGAAAAAGCGAC+GGG | - | chr4.3:31093983-31094002 | MS.gene031751:intron | 40.0% | |
| TCAGCATTCAGCATACTAAG+GGG | + | chr4.3:31094382-31094401 | None:intergenic | 40.0% | |
| TCCACTCCCTGGAATATTAA+AGG | - | chr4.3:31096843-31096862 | MS.gene031751:CDS | 40.0% | |
| TCCTATTGTGGTCAAACACT+CGG | - | chr4.3:31096511-31096530 | MS.gene031751:intron | 40.0% | |
| TGAGAAAAACATCCGTCGAA+GGG | - | chr4.3:31095245-31095264 | MS.gene031751:intron | 40.0% | |
| TGATATACTGGACTTGAACC+TGG | - | chr4.3:31093415-31093434 | MS.gene031751:intron | 40.0% | |
| TGTGTAACATTGTCACTCTG+TGG | + | chr4.3:31096721-31096740 | None:intergenic | 40.0% | |
| TTAAATAGACACAGCGTCTC+GGG | - | chr4.3:31095473-31095492 | MS.gene031751:intron | 40.0% | |
| TTAATACCGGAATGCTAACC+TGG | - | chr4.3:31095575-31095594 | MS.gene031751:intron | 40.0% | |
| TTGTCAATGATTAAGCACGG+TGG | - | chr4.3:31094842-31094861 | MS.gene031751:intron | 40.0% | |
| TTTAATATTCCAGGGAGTGG+AGG | + | chr4.3:31096844-31096863 | None:intergenic | 40.0% | |
| ! | ATTTTCTGCAGTGTGTGAGA+AGG | - | chr4.3:31094535-31094554 | MS.gene031751:CDS | 40.0% |
| ! | CTGTATCTTTTCTCTCTGTG+TGG | - | chr4.3:31095397-31095416 | MS.gene031751:intron | 40.0% |
| ! | TACACTAGTTTCCACTTTCC+GGG | + | chr4.3:31096491-31096510 | None:intergenic | 40.0% |
| ! | TGAGAACTGTGCTTTTAACG+TGG | + | chr4.3:31094623-31094642 | None:intergenic | 40.0% |
| ! | TTTTCTGATCCAAGCAATGG+TGG | - | chr4.3:31095089-31095108 | MS.gene031751:intron | 40.0% |
| !! | ACTTTCTAAGATCCATGACC+AGG | + | chr4.3:31096184-31096203 | None:intergenic | 40.0% |
| !! | GTTCTCAAGGCAATGGATTT+TGG | - | chr4.3:31096682-31096701 | MS.gene031751:CDS | 40.0% |
| !! | TCAAGGCAATGGATTTTGGT+GGG | - | chr4.3:31096686-31096705 | MS.gene031751:CDS | 40.0% |
| !! | TTTAGCTTGGGATGAGATTC+TGG | - | chr4.3:31093304-31093323 | MS.gene031751:intron | 40.0% |
| !!! | GATTAAGCACGGTGGTTTTT+TGG | - | chr4.3:31094850-31094869 | MS.gene031751:intron | 40.0% |
| ACAACATGAAATGGGTAGGC+AGG | + | chr4.3:31094934-31094953 | None:intergenic | 45.0% | |
| ACAAGTCTTGGGAGCTAGTT+AGG | - | chr4.3:31096558-31096577 | MS.gene031751:intron | 45.0% | |
| ACACAATATTGCGGATGGAG+GGG | - | chr4.3:31096738-31096757 | MS.gene031751:CDS | 45.0% | |
| ACACACAATATTGCGGATGG+AGG | - | chr4.3:31096736-31096755 | MS.gene031751:CDS | 45.0% | |
| AGCAATCCAGGTTAGCATTC+CGG | + | chr4.3:31095584-31095603 | None:intergenic | 45.0% | |
| AGGTAAAGATACACCTCCAC+TGG | + | chr4.3:31095770-31095789 | None:intergenic | 45.0% | |
| ATAAGAATGGAAGAGGGCTC+CGG | - | chr4.3:31094018-31094037 | MS.gene031751:intron | 45.0% | |
| ATACGGAGAATTCCTGGTCA+TGG | - | chr4.3:31096169-31096188 | MS.gene031751:intron | 45.0% | |
| ATAGGTGGCAGATGAACTTG+TGG | - | chr4.3:31095061-31095080 | MS.gene031751:intron | 45.0% | |
| ATATCACTCAGACTGGTACG+AGG | + | chr4.3:31095348-31095367 | None:intergenic | 45.0% | |
| CAAGTCTTGGGAGCTAGTTA+GGG | - | chr4.3:31096559-31096578 | MS.gene031751:intron | 45.0% | |
| CACACAATATTGCGGATGGA+GGG | - | chr4.3:31096737-31096756 | MS.gene031751:CDS | 45.0% | |
| CGAAGAGGATGAGGAATTGA+TGG | - | chr4.3:31093016-31093035 | MS.gene031751:CDS | 45.0% | |
| CTGTTACGGATGTTGCGTTA+TGG | + | chr4.3:31093809-31093828 | None:intergenic | 45.0% | |
| GCCTTTAATATTCCAGGGAG+TGG | + | chr4.3:31096847-31096866 | None:intergenic | 45.0% | |
| GGGGTGATAAGAATGGAAGA+GGG | - | chr4.3:31094012-31094031 | MS.gene031751:intron | 45.0% | |
| GGGTTTATACGGAGAATTCC+TGG | - | chr4.3:31096163-31096182 | MS.gene031751:intron | 45.0% | |
| GGTAAAGATACACCTCCACT+GGG | + | chr4.3:31095769-31095788 | None:intergenic | 45.0% | |
| GGTACTGCGTAAACATTGAG+TGG | + | chr4.3:31093967-31093986 | None:intergenic | 45.0% | |
| GTATCATAAAGCCCGGAAAG+TGG | - | chr4.3:31096477-31096496 | MS.gene031751:intron | 45.0% | |
| GTCAGGCATGTATCAATCAC+AGG | - | chr4.3:31096774-31096793 | MS.gene031751:CDS | 45.0% | |
| TCCGAGTGTTTGACCACAAT+AGG | + | chr4.3:31096515-31096534 | None:intergenic | 45.0% | |
| TTTGAGAGCAGCGTTATCAC+CGG | + | chr4.3:31093135-31093154 | None:intergenic | 45.0% | |
| ! | GGATGTTGCGTTATGGATTG+TGG | + | chr4.3:31093802-31093821 | None:intergenic | 45.0% |
| ! | GTTATGGATTGTGGTCGTTG+CGG | + | chr4.3:31093793-31093812 | None:intergenic | 45.0% |
| !! | AAGGCAATGGATTTTGGTGG+GGG | - | chr4.3:31096688-31096707 | MS.gene031751:CDS | 45.0% |
| !! | CAAGGCAATGGATTTTGGTG+GGG | - | chr4.3:31096687-31096706 | MS.gene031751:CDS | 45.0% |
| !! | CTCAAGGCAATGGATTTTGG+TGG | - | chr4.3:31096685-31096704 | MS.gene031751:CDS | 45.0% |
| !! | GATGAGGAATTGATGGGTTG+CGG | - | chr4.3:31093023-31093042 | MS.gene031751:CDS | 45.0% |
| !!! | TTTTGGGATCAAGTTGTCCG+TGG | - | chr4.3:31094867-31094886 | MS.gene031751:intron | 45.0% |
| !!! | TTTAATCAAATTTATATTTT+TGG | + | chr4.3:31095458-31095477 | None:intergenic | 5.0% |
| AAACGTTATGGAAGCGGCCA+TGG | - | chr4.3:31093528-31093547 | MS.gene031751:CDS | 50.0% | |
| AAAGATACACCTCCACTGGG+AGG | + | chr4.3:31095766-31095785 | None:intergenic | 50.0% | |
| AAGGAAAGCAGCCTATCTGC+AGG | - | chr4.3:31095513-31095532 | MS.gene031751:intron | 50.0% | |
| AATATTGCGGATGGAGGGGA+AGG | - | chr4.3:31096742-31096761 | MS.gene031751:CDS | 50.0% | |
| ACTACGATTTCCGGCCAATC+AGG | - | chr4.3:31093047-31093066 | MS.gene031751:CDS | 50.0% | |
| ATGGAAGCGGCCATGGTAAT+TGG | - | chr4.3:31093535-31093554 | MS.gene031751:CDS | 50.0% | |
| GAGCATCATAGACCCTTCGA+CGG | + | chr4.3:31095260-31095279 | None:intergenic | 50.0% | |
| GCTGTTGGGGGTGATAAGAA+TGG | - | chr4.3:31094005-31094024 | MS.gene031751:intron | 50.0% | |
| GGGGGTGATAAGAATGGAAG+AGG | - | chr4.3:31094011-31094030 | MS.gene031751:intron | 50.0% | |
| GGTTGCGGAACTACGATTTC+CGG | - | chr4.3:31093038-31093057 | MS.gene031751:CDS | 50.0% | |
| TAGCCTCAGAAACTGGCAGT+GGG | - | chr4.3:31094897-31094916 | MS.gene031751:intron | 50.0% | |
| TCCACTTCCACAGTTGCATG+AGG | + | chr4.3:31096317-31096336 | None:intergenic | 50.0% | |
| TCCTCATGCAACTGTGGAAG+TGG | - | chr4.3:31096313-31096332 | MS.gene031751:intron | 50.0% | |
| TGCTGTGATGTGGCTCCTAT+TGG | - | chr4.3:31096245-31096264 | MS.gene031751:intron | 50.0% | |
| TTAGCCTCAGAAACTGGCAG+TGG | - | chr4.3:31094896-31094915 | MS.gene031751:intron | 50.0% | |
| TTCCTCATCCTCTTCGTCCA+CGG | + | chr4.3:31093012-31093031 | None:intergenic | 50.0% | |
| TTGTCGTCATGCAGCTCGAA+AGG | + | chr4.3:31096658-31096677 | None:intergenic | 50.0% | |
| TTTGAATCGTGGTCGCGCTA+AGG | + | chr4.3:31093847-31093866 | None:intergenic | 50.0% | |
| ! | TGGTGCTTTTGTCCCTGTGT+TGG | - | chr4.3:31096587-31096606 | MS.gene031751:intron | 50.0% |
| !! | AAGAAAAAGCGACGGGCTGT+TGG | - | chr4.3:31093990-31094009 | MS.gene031751:intron | 50.0% |
| !! | AGAAAAAGCGACGGGCTGTT+GGG | - | chr4.3:31093991-31094010 | MS.gene031751:intron | 50.0% |
| !!! | AGCCCGTCGCTTTTTCTTCT+TGG | + | chr4.3:31093988-31094007 | None:intergenic | 50.0% |
| AAGCCCACTGCCAGTTTCTG+AGG | + | chr4.3:31094903-31094922 | None:intergenic | 55.0% | |
| ACTCCGGCTAGATGGTAACC+CGG | + | chr4.3:31093090-31093109 | None:intergenic | 55.0% | |
| AGACTCACGCAACTACTGCC+TGG | + | chr4.3:31093196-31093215 | None:intergenic | 55.0% | |
| AGCTCAGGAAATCCTCCCAG+TGG | - | chr4.3:31095751-31095770 | MS.gene031751:intron | 55.0% | |
| CATGAAATGGGTAGGCAGGC+AGG | + | chr4.3:31094930-31094949 | None:intergenic | 55.0% | |
| CTGCTCAAGCTCCTGCAGAT+AGG | + | chr4.3:31095527-31095546 | None:intergenic | 55.0% | |
| GACACGTCCTCATGCAACTG+TGG | - | chr4.3:31096307-31096326 | MS.gene031751:intron | 55.0% | |
| GACTCACGCAACTACTGCCT+GGG | + | chr4.3:31093195-31093214 | None:intergenic | 55.0% | |
| GTCTTGGGAGCTAGTTAGGG+TGG | - | chr4.3:31096562-31096581 | MS.gene031751:intron | 55.0% | |
| TCAATCGTCCGTGGACGAAG+AGG | - | chr4.3:31093001-31093020 | MS.gene031751:CDS | 55.0% | |
| TCAGGAAATCCTCCCAGTGG+AGG | - | chr4.3:31095754-31095773 | MS.gene031751:intron | 55.0% | |
| TCCTGCTCGTTGAGCCTGAT+TGG | + | chr4.3:31093064-31093083 | None:intergenic | 55.0% | |
| TCGTCCACGGACGATTGATG+CGG | + | chr4.3:31092999-31093018 | None:intergenic | 55.0% | |
| ! | GGGGAAGGTTCTAGCATGTC+AGG | - | chr4.3:31096757-31096776 | MS.gene031751:CDS | 55.0% |
| ! | TCCTGTTGGCTGCTGTGATG+TGG | - | chr4.3:31096235-31096254 | MS.gene031751:intron | 55.0% |
| ! | TGATGACGATGCTGCTTCCC+AGG | - | chr4.3:31093175-31093194 | MS.gene031751:CDS | 55.0% |
| !! | AAAAAGCGACGGGCTGTTGG+GGG | - | chr4.3:31093993-31094012 | MS.gene031751:intron | 55.0% |
| !! | GAAAAAGCGACGGGCTGTTG+GGG | - | chr4.3:31093992-31094011 | MS.gene031751:intron | 55.0% |
| AGACACAGCGTCTCGGGCTT+AGG | - | chr4.3:31095479-31095498 | MS.gene031751:intron | 60.0% | |
| CCAGGGAGTGGAGGTGATGT+CGG | + | chr4.3:31096835-31096854 | None:intergenic | 60.0% | |
| GAGAGCAGCGTTATCACCGG+CGG | + | chr4.3:31093132-31093151 | None:intergenic | 60.0% | |
| GCCAATCAGGCTCAACGAGC+AGG | - | chr4.3:31093060-31093079 | MS.gene031751:CDS | 60.0% | |
| GCCACATCACAGCAGCCAAC+AGG | + | chr4.3:31096239-31096258 | None:intergenic | 60.0% | |
| GCTCGTTGAGCCTGATTGGC+CGG | + | chr4.3:31093060-31093079 | None:intergenic | 60.0% | |
| GGGAGCTAGTTAGGGTGGTG+TGG | - | chr4.3:31096567-31096586 | MS.gene031751:intron | 60.0% | |
| GGGGGCAAACCACCATTGCT+TGG | + | chr4.3:31095101-31095120 | None:intergenic | 60.0% | |
| GTCCGTGGACGAAGAGGATG+AGG | - | chr4.3:31093007-31093026 | MS.gene031751:CDS | 60.0% | |
| GTCTGCTCACTCCGGCTAGA+TGG | + | chr4.3:31093098-31093117 | None:intergenic | 60.0% | |
| GTGCCGGGTTACCATCTAGC+CGG | - | chr4.3:31093084-31093103 | MS.gene031751:CDS | 60.0% | |
| TAGCCGGAGTGAGCAGACCA+CGG | - | chr4.3:31093100-31093119 | MS.gene031751:CDS | 60.0% | |
| ! | TGGTGGTTTGCCCCCTGATC+AGG | - | chr4.3:31095106-31095125 | MS.gene031751:intron | 60.0% |
| AGCCGGAGTGAGCAGACCAC+GGG | - | chr4.3:31093101-31093120 | MS.gene031751:CDS | 65.0% | |
| CCGACATCACCTCCACTCCC+TGG | - | chr4.3:31096832-31096851 | MS.gene031751:CDS | 65.0% | |
| GCAGCCGCATCAATCGTCCG+TGG | - | chr4.3:31092992-31093011 | MS.gene031751:CDS | 65.0% | |
| GGGAGTGGAGGTGATGTCGG+AGG | + | chr4.3:31096832-31096851 | None:intergenic | 65.0% | |
| TCCCCGTGGTCTGCTCACTC+CGG | + | chr4.3:31093106-31093125 | None:intergenic | 65.0% | |
| ! | GGCTCAACGAGCAGGAGTGC+CGG | - | chr4.3:31093068-31093087 | MS.gene031751:CDS | 65.0% |
| !! | GCTCAACGAGCAGGAGTGCC+GGG | - | chr4.3:31093069-31093088 | MS.gene031751:CDS | 65.0% |
| GCCGGAGTGAGCAGACCACG+GGG | - | chr4.3:31093102-31093121 | MS.gene031751:CDS | 70.0% | |
| ATCACCGGCGGCTGTCCCCG+TGG | + | chr4.3:31093120-31093139 | None:intergenic | 75.0% | |
| CAGACCACGGGGACAGCCGC+CGG | - | chr4.3:31093113-31093132 | MS.gene031751:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 31092984 | 31096888 | 31092984 | ID=MS.gene031751 |
| chr4.3 | mRNA | 31092984 | 31096888 | 31092984 | ID=MS.gene031751.t1;Parent=MS.gene031751 |
| chr4.3 | exon | 31096665 | 31096888 | 31096665 | ID=MS.gene031751.t1.exon1;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31096665 | 31096888 | 31096665 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31095816 | 31095889 | 31095816 | ID=MS.gene031751.t1.exon2;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31095816 | 31095889 | 31095816 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31095283 | 31095326 | 31095283 | ID=MS.gene031751.t1.exon3;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31095283 | 31095326 | 31095283 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31094745 | 31094807 | 31094745 | ID=MS.gene031751.t1.exon4;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31094745 | 31094807 | 31094745 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31094492 | 31094638 | 31094492 | ID=MS.gene031751.t1.exon5;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31094492 | 31094638 | 31094492 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31094323 | 31094391 | 31094323 | ID=MS.gene031751.t1.exon6;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31094323 | 31094391 | 31094323 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31094068 | 31094166 | 31094068 | ID=MS.gene031751.t1.exon7;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31094068 | 31094166 | 31094068 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31093494 | 31093564 | 31093494 | ID=MS.gene031751.t1.exon8;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31093494 | 31093564 | 31093494 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| chr4.3 | exon | 31092984 | 31093221 | 31092984 | ID=MS.gene031751.t1.exon9;Parent=MS.gene031751.t1 |
| chr4.3 | CDS | 31092984 | 31093221 | 31092984 | ID=cds.MS.gene031751.t1;Parent=MS.gene031751.t1 |
| Gene Sequence |
| Protein sequence |
