Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033041.t1 | XP_013458022.1 | 96 | 325 | 13 | 0 | 1 | 325 | 1 | 325 | 2.10E-173 | 618.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033041.t1 | P50288 | 82.7 | 324 | 48 | 2 | 2 | 320 | 3 | 323 | 3.3e-151 | 535.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033041.t1 | A0A072USJ6 | 96.0 | 325 | 13 | 0 | 1 | 325 | 1 | 325 | 1.5e-173 | 618.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene00469 | MS.gene033041 | PPI |
| MS.gene058167 | MS.gene033041 | PPI |
| MS.gene32919 | MS.gene033041 | PPI |
| MS.gene63165 | MS.gene033041 | PPI |
| MS.gene044081 | MS.gene033041 | PPI |
| MS.gene24445 | MS.gene033041 | PPI |
| MS.gene012937 | MS.gene033041 | PPI |
| MS.gene033041 | MS.gene062544 | PPI |
| MS.gene015131 | MS.gene033041 | PPI |
| MS.gene38687 | MS.gene033041 | PPI |
| MS.gene34100 | MS.gene033041 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033041.t1 | MTR_4g109920 | 96.000 | 325 | 13 | 0 | 1 | 325 | 1 | 325 | 0.0 | 643 |
| MS.gene033041.t1 | MTR_4g109900 | 93.846 | 325 | 19 | 1 | 1 | 325 | 1 | 324 | 0.0 | 628 |
| MS.gene033041.t1 | MTR_3g102370 | 60.372 | 323 | 119 | 3 | 2 | 319 | 3 | 321 | 3.20e-134 | 384 |
| MS.gene033041.t1 | MTR_1g094030 | 60.185 | 324 | 118 | 3 | 1 | 319 | 2 | 319 | 1.94e-132 | 380 |
| MS.gene033041.t1 | MTR_1g018760 | 58.824 | 323 | 127 | 2 | 2 | 319 | 3 | 324 | 6.37e-132 | 379 |
| MS.gene033041.t1 | MTR_8g031580 | 30.035 | 283 | 156 | 7 | 5 | 254 | 23 | 296 | 1.74e-26 | 107 |
| MS.gene033041.t1 | MTR_8g031580 | 30.035 | 283 | 156 | 7 | 5 | 254 | 23 | 296 | 5.09e-26 | 107 |
| MS.gene033041.t1 | MTR_3g008180 | 29.921 | 254 | 149 | 10 | 67 | 295 | 77 | 326 | 2.28e-16 | 79.3 |
| MS.gene033041.t1 | MTR_3g008180 | 29.004 | 231 | 135 | 10 | 90 | 295 | 1 | 227 | 2.10e-12 | 66.6 |
| MS.gene033041.t1 | MTR_8g031580 | 26.601 | 203 | 110 | 6 | 85 | 254 | 1 | 197 | 1.58e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033041.t1 | AT5G08100 | 76.324 | 321 | 68 | 1 | 1 | 321 | 2 | 314 | 1.16e-178 | 496 |
| MS.gene033041.t1 | AT3G16150 | 58.824 | 323 | 127 | 2 | 2 | 319 | 3 | 324 | 2.86e-134 | 385 |
| MS.gene033041.t1 | AT5G08100 | 76.446 | 242 | 49 | 1 | 80 | 321 | 1 | 234 | 3.83e-131 | 373 |
| MS.gene033041.t1 | AT4G00590 | 25.672 | 335 | 204 | 8 | 5 | 297 | 15 | 346 | 1.76e-22 | 97.4 |
| MS.gene033041.t1 | AT4G00590 | 25.538 | 325 | 202 | 9 | 5 | 297 | 15 | 331 | 2.16e-18 | 85.5 |
| MS.gene033041.t1 | AT5G61540 | 29.694 | 229 | 132 | 8 | 67 | 270 | 80 | 304 | 5.74e-17 | 81.3 |
| MS.gene033041.t1 | AT5G61540 | 28.632 | 234 | 135 | 10 | 90 | 295 | 1 | 230 | 1.18e-13 | 70.1 |
| MS.gene033041.t1 | AT5G61540 | 28.632 | 234 | 135 | 10 | 90 | 295 | 1 | 230 | 1.18e-13 | 70.1 |
Find 80 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCTTGGTAGGATCATTT+TGG | 0.204412 | 8.2:-16110281 | None:intergenic |
| AACATTCCTGTTGTATTATA+AGG | 0.204789 | 8.2:-16110666 | None:intergenic |
| AAATACGCCTCATATTTATT+TGG | 0.208099 | 8.2:+16108006 | MS.gene033041:CDS |
| CGTTCCGGTGGAAGTGAATA+TGG | 0.211132 | 8.2:-16107466 | None:intergenic |
| TTCTTTGGCTCGTTTGGTTA+TGG | 0.246722 | 8.2:+16107982 | MS.gene033041:CDS |
| TGCCGTTTCTTTGGCTCGTT+TGG | 0.294974 | 8.2:+16107976 | MS.gene033041:CDS |
| ATCAGGCAAAAGAAGCAAAT+AGG | 0.299059 | 8.2:+16110120 | MS.gene033041:CDS |
| TGAGAGCTTTGACACCAATT+TGG | 0.303094 | 8.2:-16107525 | None:intergenic |
| TGTTGTGAATGCCGTTTCTT+TGG | 0.303246 | 8.2:+16107967 | MS.gene033041:CDS |
| GCTACTCAGAGGTTGCTATT+TGG | 0.304286 | 8.2:+16110712 | MS.gene033041:CDS |
| CATTTCAACCGTGCCTTTGT+TGG | 0.327791 | 8.2:-16107885 | None:intergenic |
| CTCCGTCACTGCCTCCAAAT+TGG | 0.364282 | 8.2:+16107511 | MS.gene033041:CDS |
| CAACAAAGGCACGGTTGAAA+TGG | 0.373150 | 8.2:+16107886 | MS.gene033041:CDS |
| ATGGTTGCTGTGTCTGCTGC+TGG | 0.378968 | 8.2:+16110630 | MS.gene033041:CDS |
| AACAAGATGGTTGGTCGAAT+TGG | 0.379538 | 8.2:+16110414 | MS.gene033041:CDS |
| TGAAATGGAAGCTTCTATAA+TGG | 0.384855 | 8.2:+16107901 | MS.gene033041:CDS |
| TCGCGTGGTTGACGGCGTTC+CGG | 0.399989 | 8.2:-16107481 | None:intergenic |
| TTATGTGCAGTTTCTGCAAC+AGG | 0.401688 | 8.2:+16110477 | MS.gene033041:CDS |
| GAGCTTCTTCGCGTGGTTGA+CGG | 0.403682 | 8.2:-16107489 | None:intergenic |
| ATGAAATGTGGTGCTGTGTC+TGG | 0.412256 | 8.2:+16107935 | MS.gene033041:CDS |
| AAATATTGAAAGGCTAAATC+AGG | 0.416374 | 8.2:+16110103 | MS.gene033041:CDS |
| TCAGGCAAAAGAAGCAAATA+GGG | 0.422197 | 8.2:+16110121 | MS.gene033041:CDS |
| CTAGCTTCTGCAACATCAAC+CGG | 0.423930 | 8.2:+16110381 | MS.gene033041:CDS |
| TGGTGTTTCTGTTTCACTCT+TGG | 0.426981 | 8.2:-16110295 | None:intergenic |
| GTTTCTGTTTCACTCTTGGT+AGG | 0.442883 | 8.2:-16110291 | None:intergenic |
| AGAAACTGCACATAATTCAT+TGG | 0.443619 | 8.2:-16110469 | None:intergenic |
| ATTGGCGACACGCCACTCAT+AGG | 0.458956 | 8.2:+16110432 | MS.gene033041:CDS |
| AGAGCTTGTGCTACTGAAGA+TGG | 0.462101 | 8.2:+16110690 | MS.gene033041:CDS |
| ATAGCTCTACACGGCGGCGC+CGG | 0.464394 | 8.2:+16107436 | MS.gene033041:CDS |
| GCAATGCCTTATAATACAAC+AGG | 0.464408 | 8.2:+16110660 | MS.gene033041:CDS |
| GCAGTTTCTGCAACAGGTAA+AGG | 0.485743 | 8.2:+16110483 | MS.gene033041:CDS |
| TCAAAAGCCAAATAAATATG+AGG | 0.487507 | 8.2:-16108013 | None:intergenic |
| ATTCAAAGGTCTCTCTCTAA+AGG | 0.490069 | 8.2:+16110557 | MS.gene033041:CDS |
| ACAGAAACACCAGTTGCTAA+TGG | 0.490461 | 8.2:+16110306 | MS.gene033041:CDS |
| ACCATACCAACAGTGCCCTT+TGG | 0.495938 | 8.2:-16110612 | None:intergenic |
| CCACACTTCAATGCTGGTAG+AGG | 0.496753 | 8.2:+16107851 | MS.gene033041:CDS |
| ACCAAAGGGCACTGTTGGTA+TGG | 0.498908 | 8.2:+16110611 | MS.gene033041:CDS |
| TGACTATCACCATTAGCAAC+TGG | 0.501796 | 8.2:-16110315 | None:intergenic |
| AAGAGATGTGGCTGCAATGA+TGG | 0.524648 | 8.2:+16110533 | MS.gene033041:CDS |
| GTTCCGGTGGAAGTGAATAT+GGG | 0.527909 | 8.2:-16107465 | None:intergenic |
| CACCAATTTGGAGGCAGTGA+CGG | 0.530368 | 8.2:-16107513 | None:intergenic |
| CGCACACCAAAGGGCACTGT+TGG | 0.530836 | 8.2:+16110606 | MS.gene033041:CDS |
| TTGTTCATAGGTTCGTGAGT+TGG | 0.541945 | 8.2:+16107820 | MS.gene033041:intron |
| ATGGAAGCTTCTATAATGGA+TGG | 0.542192 | 8.2:+16107905 | MS.gene033041:CDS |
| CAAGTTCAACGACGTCTAGA+GGG | 0.545254 | 8.2:-16107561 | None:intergenic |
| GTACATGAGCGCACACCAAA+GGG | 0.545609 | 8.2:+16110597 | MS.gene033041:CDS |
| GACACGCCACTCATAGGTGC+TGG | 0.548340 | 8.2:+16110438 | MS.gene033041:CDS |
| GAGCTTTGACACCAATTTGG+AGG | 0.548680 | 8.2:-16107522 | None:intergenic |
| TGTGTAGCTGTTGATAGTAA+TGG | 0.549412 | 8.2:+16110354 | MS.gene033041:CDS |
| CGTGGTTGACGGCGTTCCGG+TGG | 0.549993 | 8.2:-16107478 | None:intergenic |
| AACCAAACGAGCCAAAGAAA+CGG | 0.550876 | 8.2:-16107978 | None:intergenic |
| AATATTCCACACTTCAATGC+TGG | 0.552223 | 8.2:+16107845 | MS.gene033041:CDS |
| CATCTTGTTCACTAATCCAC+CGG | 0.557068 | 8.2:-16110400 | None:intergenic |
| AAAAGAAGCAAATAGGGTCC+AGG | 0.568354 | 8.2:+16110127 | MS.gene033041:CDS |
| GATAGTCAACTCGGAACTGT+TGG | 0.571797 | 8.2:+16110330 | MS.gene033041:CDS |
| TTACTCCAGAAAATATTGAA+AGG | 0.577051 | 8.2:+16110093 | MS.gene033041:CDS |
| GGATTAGTGAACAAGATGGT+TGG | 0.581947 | 8.2:+16110405 | MS.gene033041:CDS |
| GACGTCTAGAGGGGCCATGT+TGG | 0.581967 | 8.2:-16107551 | None:intergenic |
| ACAAGTTCAACGACGTCTAG+AGG | 0.588579 | 8.2:-16107562 | None:intergenic |
| CATCCCATATTCACTTCCAC+CGG | 0.593610 | 8.2:+16107462 | MS.gene033041:CDS |
| TGTACATGAGCGCACACCAA+AGG | 0.600192 | 8.2:+16110596 | MS.gene033041:CDS |
| GGTTCTGTTCTTACCAACAA+AGG | 0.614531 | 8.2:+16107872 | MS.gene033041:CDS |
| TGACGGAGAGCTTCTTCGCG+TGG | 0.615307 | 8.2:-16107496 | None:intergenic |
| CAAAGCTCTCAAATCCAACA+TGG | 0.626979 | 8.2:+16107537 | MS.gene033041:CDS |
| CGGTGGATTAGTGAACAAGA+TGG | 0.646608 | 8.2:+16110401 | MS.gene033041:CDS |
| TATGTTCCAGCACCTATGAG+TGG | 0.651676 | 8.2:-16110444 | None:intergenic |
| GCTAATGGTGATAGTCAACT+CGG | 0.652387 | 8.2:+16110321 | MS.gene033041:CDS |
| AAGTGAATATGGGATGTCGC+CGG | 0.653946 | 8.2:-16107455 | None:intergenic |
| TGTTCTTACCAACAAAGGCA+CGG | 0.657835 | 8.2:+16107877 | MS.gene033041:CDS |
| CGGGACAGTAGCAAGAGATG+TGG | 0.659071 | 8.2:+16110521 | MS.gene033041:CDS |
| AAGTTCAACGACGTCTAGAG+GGG | 0.663048 | 8.2:-16107560 | None:intergenic |
| GATGGAAATACTATGAAATG+TGG | 0.663282 | 8.2:+16107923 | MS.gene033041:CDS |
| GCTTCTGCAACATCAACCGG+TGG | 0.666858 | 8.2:+16110384 | MS.gene033041:CDS |
| CCTCTACCAGCATTGAAGTG+TGG | 0.667371 | 8.2:-16107851 | None:intergenic |
| AAGGCGAAGCAATAATACGC+GGG | 0.680912 | 8.2:+16110502 | MS.gene033041:CDS |
| TACTGAAGATGGCTACTCAG+AGG | 0.693227 | 8.2:+16110701 | MS.gene033041:CDS |
| GCTGCAATGATGGAATTCAA+AGG | 0.699018 | 8.2:+16110543 | MS.gene033041:CDS |
| GGTTGGGCAATAGCTCTACA+CGG | 0.703748 | 8.2:+16107427 | MS.gene033041:CDS |
| AAAGGCGAAGCAATAATACG+CGG | 0.736661 | 8.2:+16110501 | MS.gene033041:CDS |
| TGGGCAATAGCTCTACACGG+CGG | 0.798330 | 8.2:+16107430 | MS.gene033041:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTAAAGTAAAAAGATA+AGG | + | chr8.2:16109400-16109419 | MS.gene033041:intron | 15.0% |
| !! | AGAACTTATAGAAATAATTT+AGG | + | chr8.2:16108178-16108197 | MS.gene033041:intron | 15.0% |
| !! | ATAAGTAAATTCAATATCAT+AGG | - | chr8.2:16110222-16110241 | None:intergenic | 15.0% |
| !! | TTATAATAATCATTGTTCAT+AGG | + | chr8.2:16107808-16107827 | MS.gene033041:intron | 15.0% |
| !! | TTTAATGTAATTATATGTGT+TGG | - | chr8.2:16107676-16107695 | None:intergenic | 15.0% |
| !!! | AAAGATATTTATTTTTCACA+AGG | - | chr8.2:16109912-16109931 | None:intergenic | 15.0% |
| !!! | CATTATATTAAAGTTTTGTT+TGG | - | chr8.2:16108389-16108408 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | - | chr8.2:16109401-16109420 | None:intergenic | 15.0% |
| !! | AATCAATCTATATATTTGTG+AGG | - | chr8.2:16110248-16110267 | None:intergenic | 20.0% |
| !!! | AGTTTAGAGCTTATATATTA+TGG | + | chr8.2:16108262-16108281 | MS.gene033041:intron | 20.0% |
| ! | AAACAAAGCCTATTGAATAA+TGG | - | chr8.2:16109943-16109962 | None:intergenic | 25.0% |
| ! | AAATACGCCTCATATTTATT+TGG | + | chr8.2:16108006-16108025 | MS.gene033041:CDS | 25.0% |
| ! | AAATATTGAAAGGCTAAATC+AGG | + | chr8.2:16110103-16110122 | MS.gene033041:CDS | 25.0% |
| ! | AAATTCAATATCATAGGAGA+AGG | - | chr8.2:16110216-16110235 | None:intergenic | 25.0% |
| ! | AACATTCCTGTTGTATTATA+AGG | - | chr8.2:16110669-16110688 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr8.2:16108657-16108676 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | + | chr8.2:16109407-16109426 | MS.gene033041:intron | 25.0% |
| ! | AATTCAATATCATAGGAGAA+GGG | - | chr8.2:16110215-16110234 | None:intergenic | 25.0% |
| ! | ACTGGTGAATTTGTAAATAA+TGG | + | chr8.2:16109988-16110007 | MS.gene033041:intron | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | + | chr8.2:16109408-16109427 | MS.gene033041:intron | 25.0% |
| ! | ATACATTCTTTCTGCATTTA+AGG | - | chr8.2:16109860-16109879 | None:intergenic | 25.0% |
| ! | TAAATAATGGTCATAGTTTG+TGG | + | chr8.2:16110001-16110020 | MS.gene033041:intron | 25.0% |
| ! | TACATTCTTTCTGCATTTAA+GGG | - | chr8.2:16109859-16109878 | None:intergenic | 25.0% |
| ! | TCAAAAGCCAAATAAATATG+AGG | - | chr8.2:16108016-16108035 | None:intergenic | 25.0% |
| ! | TTACTCCAGAAAATATTGAA+AGG | + | chr8.2:16110093-16110112 | MS.gene033041:CDS | 25.0% |
| ! | TTCTATGAAAGTTATATACC+TGG | - | chr8.2:16110148-16110167 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr8.2:16108674-16108693 | MS.gene033041:intron | 25.0% |
| !!! | CATATTTATTTGGCTTTTGA+TGG | + | chr8.2:16108016-16108035 | MS.gene033041:CDS | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr8.2:16108799-16108818 | None:intergenic | 25.0% |
| !!! | TATTTTCTGGAGTAATGAAA+TGG | - | chr8.2:16110088-16110107 | None:intergenic | 25.0% |
| !!! | TTTAGCCTTTCAATATTTTC+TGG | - | chr8.2:16110101-16110120 | None:intergenic | 25.0% |
| AATGTCTTCAATCACTATAC+TGG | + | chr8.2:16108422-16108441 | MS.gene033041:intron | 30.0% | |
| ACAAATTCACCAGTAATTCA+AGG | - | chr8.2:16109982-16110001 | None:intergenic | 30.0% | |
| AGAAACTGCACATAATTCAT+TGG | - | chr8.2:16110472-16110491 | None:intergenic | 30.0% | |
| AGAATGCGATTAATCAAATG+TGG | + | chr8.2:16108477-16108496 | MS.gene033041:intron | 30.0% | |
| AGAGAAGTCCATTATTCAAT+AGG | + | chr8.2:16109932-16109951 | MS.gene033041:intron | 30.0% | |
| AGTATAGTGATTGAAGACAT+TGG | - | chr8.2:16108423-16108442 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | + | chr8.2:16109138-16109157 | MS.gene033041:intron | 30.0% | |
| GAGAAGGGAAAAAATACATA+AGG | - | chr8.2:16110200-16110219 | None:intergenic | 30.0% | |
| GAGCTTATATATTATGGAGA+CGG | + | chr8.2:16108268-16108287 | MS.gene033041:intron | 30.0% | |
| GATGGAAATACTATGAAATG+TGG | + | chr8.2:16107923-16107942 | MS.gene033041:CDS | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr8.2:16108617-16108636 | MS.gene033041:intron | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | - | chr8.2:16109230-16109249 | None:intergenic | 30.0% | |
| TATTGTTATGGGAAAATCTC+CGG | + | chr8.2:16109450-16109469 | MS.gene033041:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr8.2:16108610-16108629 | None:intergenic | 30.0% | |
| TGAAATGGAAGCTTCTATAA+TGG | + | chr8.2:16107901-16107920 | MS.gene033041:CDS | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | - | chr8.2:16109210-16109229 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr8.2:16108613-16108632 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | - | chr8.2:16109135-16109154 | None:intergenic | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr8.2:16108652-16108671 | MS.gene033041:intron | 30.0% |
| ! | TCTAAAATGATTACGACAGT+AGG | - | chr8.2:16108147-16108166 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr8.2:16108803-16108822 | MS.gene033041:intron | 30.0% |
| ! | TTCTGCATTTAAGACATGTT+TGG | + | chr8.2:16108099-16108118 | MS.gene033041:intron | 30.0% |
| !! | CATGTTCATAAGTTGTTTTC+AGG | + | chr8.2:16108202-16108221 | MS.gene033041:intron | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | - | chr8.2:16109614-16109633 | None:intergenic | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | - | chr8.2:16109608-16109627 | None:intergenic | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | - | chr8.2:16109389-16109408 | None:intergenic | 30.0% |
| AAACAATCCTGAAGAGCTTA+TGG | - | chr8.2:16108234-16108253 | None:intergenic | 35.0% | |
| AACTAGTCACCTTGAATTAC+TGG | + | chr8.2:16109970-16109989 | MS.gene033041:intron | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | - | chr8.2:16109202-16109221 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr8.2:16109001-16109020 | MS.gene033041:intron | 35.0% | |
| AAGAAAAGAGACTCACGTTA+CGG | - | chr8.2:16109734-16109753 | None:intergenic | 35.0% | |
| AATATTCCACACTTCAATGC+TGG | + | chr8.2:16107845-16107864 | MS.gene033041:CDS | 35.0% | |
| ACGTAACTGCATTTCTATAG+GGG | - | chr8.2:16109814-16109833 | None:intergenic | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | - | chr8.2:16109201-16109220 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr8.2:16108862-16108881 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr8.2:16108645-16108664 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr8.2:16108810-16108829 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr8.2:16108997-16109016 | None:intergenic | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | - | chr8.2:16109774-16109793 | None:intergenic | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr8.2:16109150-16109169 | None:intergenic | 35.0% | |
| ATCAGGCAAAAGAAGCAAAT+AGG | + | chr8.2:16110120-16110139 | MS.gene033041:CDS | 35.0% | |
| ATTCAAAGGTCTCTCTCTAA+AGG | + | chr8.2:16110557-16110576 | MS.gene033041:CDS | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr8.2:16108785-16108804 | None:intergenic | 35.0% | |
| GACGTAACTGCATTTCTATA+GGG | - | chr8.2:16109815-16109834 | None:intergenic | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | - | chr8.2:16109779-16109798 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | + | chr8.2:16109137-16109156 | MS.gene033041:intron | 35.0% | |
| GCAATGCCTTATAATACAAC+AGG | + | chr8.2:16110660-16110679 | MS.gene033041:CDS | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+GGG | - | chr8.2:16108732-16108751 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | - | chr8.2:16109136-16109155 | None:intergenic | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | - | chr8.2:16109075-16109094 | None:intergenic | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | - | chr8.2:16109773-16109792 | None:intergenic | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | + | chr8.2:16109139-16109158 | MS.gene033041:intron | 35.0% | |
| TCAGGCAAAAGAAGCAAATA+GGG | + | chr8.2:16110121-16110140 | MS.gene033041:CDS | 35.0% | |
| TGACGTAACTGCATTTCTAT+AGG | - | chr8.2:16109816-16109835 | None:intergenic | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | - | chr8.2:16109780-16109799 | None:intergenic | 35.0% | |
| TGGTAAGAAGAGTAGATCAA+AGG | - | chr8.2:16108733-16108752 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr8.2:16108790-16108809 | None:intergenic | 35.0% | |
| TTAATCAAATGTGGCTCATG+TGG | + | chr8.2:16108486-16108505 | MS.gene033041:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr8.2:16108733-16108752 | MS.gene033041:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr8.2:16109010-16109029 | None:intergenic | 35.0% |
| ! | ATGGAAGCTTCTATAATGGA+TGG | + | chr8.2:16107905-16107924 | MS.gene033041:CDS | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr8.2:16108633-16108652 | None:intergenic | 35.0% |
| ! | GATTTTGCAAGACAACAAGT+TGG | + | chr8.2:16108046-16108065 | MS.gene033041:intron | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | - | chr8.2:16109451-16109470 | None:intergenic | 35.0% |
| ! | GTTATTTCCATAAGCTCTTC+AGG | + | chr8.2:16108224-16108243 | MS.gene033041:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | + | chr8.2:16109343-16109362 | MS.gene033041:intron | 35.0% |
| ! | TTGGTAGGATCATTTTGGAT+TGG | - | chr8.2:16110279-16110298 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | + | chr8.2:16109519-16109538 | MS.gene033041:intron | 35.0% |
| !! | TGTGTAGCTGTTGATAGTAA+TGG | + | chr8.2:16110354-16110373 | MS.gene033041:CDS | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr8.2:16109108-16109127 | MS.gene033041:intron | 35.0% |
| !!! | AACCAATTTGGTTTTATGCC+TGG | - | chr8.2:16109709-16109728 | None:intergenic | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | - | chr8.2:16109708-16109727 | None:intergenic | 35.0% |
| !!! | AGGATCATTTTGGATTGGTT+GGG | - | chr8.2:16110274-16110293 | None:intergenic | 35.0% |
| !!! | ATCAAGTAGCCTTATTTTGC+AGG | + | chr8.2:16110040-16110059 | MS.gene033041:intron | 35.0% |
| !!! | TAGGATCATTTTGGATTGGT+TGG | - | chr8.2:16110275-16110294 | None:intergenic | 35.0% |
| !!! | TCAAGTAGCCTTATTTTGCA+GGG | + | chr8.2:16110041-16110060 | MS.gene033041:intron | 35.0% |
| AAAAGAAGCAAATAGGGTCC+AGG | + | chr8.2:16110127-16110146 | MS.gene033041:CDS | 40.0% | |
| AAAGGCGAAGCAATAATACG+CGG | + | chr8.2:16110501-16110520 | MS.gene033041:CDS | 40.0% | |
| AACCAAACGAGCCAAAGAAA+CGG | - | chr8.2:16107981-16108000 | None:intergenic | 40.0% | |
| AAGAAGAGTAGATCAAAGGG+CGG | - | chr8.2:16108729-16108748 | None:intergenic | 40.0% | |
| ACAGAAACACCAGTTGCTAA+TGG | + | chr8.2:16110306-16110325 | MS.gene033041:CDS | 40.0% | |
| AGATCATTAGAGAGAGAGTG+GGG | - | chr8.2:16108835-16108854 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | - | chr8.2:16109512-16109531 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr8.2:16108704-16108723 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | - | chr8.2:16109439-16109458 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr8.2:16109171-16109190 | MS.gene033041:intron | 40.0% | |
| CAAAGCTCTCAAATCCAACA+TGG | + | chr8.2:16107537-16107556 | MS.gene033041:CDS | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | - | chr8.2:16109721-16109740 | None:intergenic | 40.0% | |
| CAGAAGAGAGCTATGAAACA+TGG | - | chr8.2:16107766-16107785 | None:intergenic | 40.0% | |
| CATCTTGTTCACTAATCCAC+CGG | - | chr8.2:16110403-16110422 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | - | chr8.2:16109510-16109529 | None:intergenic | 40.0% | |
| CTTTCTGCATTTAAGGGTCA+GGG | - | chr8.2:16109853-16109872 | None:intergenic | 40.0% | |
| GAGATCATTAGAGAGAGAGT+GGG | - | chr8.2:16108836-16108855 | None:intergenic | 40.0% | |
| GCTAATGGTGATAGTCAACT+CGG | + | chr8.2:16110321-16110340 | MS.gene033041:CDS | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | - | chr8.2:16109511-16109530 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | + | chr8.2:16109568-16109587 | MS.gene033041:intron | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr8.2:16109115-16109134 | None:intergenic | 40.0% | |
| GGTTCTGTTCTTACCAACAA+AGG | + | chr8.2:16107872-16107891 | MS.gene033041:CDS | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr8.2:16109076-16109095 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr8.2:16108868-16108887 | None:intergenic | 40.0% | |
| GTTTCTGTTTCACTCTTGGT+AGG | - | chr8.2:16110294-16110313 | None:intergenic | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | - | chr8.2:16109438-16109457 | None:intergenic | 40.0% | |
| TACCCTTTCCCATAACTTCA+TGG | + | chr8.2:16109768-16109787 | MS.gene033041:intron | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | - | chr8.2:16109509-16109528 | None:intergenic | 40.0% | |
| TCCCAGGCATAAAACCAAAT+TGG | + | chr8.2:16109704-16109723 | MS.gene033041:intron | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr8.2:16109178-16109197 | None:intergenic | 40.0% | |
| TCTTTCTGCATTTAAGGGTC+AGG | - | chr8.2:16109854-16109873 | None:intergenic | 40.0% | |
| TGACTATCACCATTAGCAAC+TGG | - | chr8.2:16110318-16110337 | None:intergenic | 40.0% | |
| TGAGATCATTAGAGAGAGAG+TGG | - | chr8.2:16108837-16108856 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | - | chr8.2:16109524-16109543 | None:intergenic | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | + | chr8.2:16109439-16109458 | MS.gene033041:intron | 40.0% | |
| TGTTCTTACCAACAAAGGCA+CGG | + | chr8.2:16107877-16107896 | MS.gene033041:CDS | 40.0% | |
| TTATGTGCAGTTTCTGCAAC+AGG | + | chr8.2:16110477-16110496 | MS.gene033041:CDS | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | + | chr8.2:16109438-16109457 | MS.gene033041:intron | 40.0% | |
| TTGTTCATAGGTTCGTGAGT+TGG | + | chr8.2:16107820-16107839 | MS.gene033041:intron | 40.0% | |
| ! | AACAAGATGGTTGGTCGAAT+TGG | + | chr8.2:16110414-16110433 | MS.gene033041:CDS | 40.0% |
| ! | CACTCTTGGTAGGATCATTT+TGG | - | chr8.2:16110284-16110303 | None:intergenic | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | - | chr8.2:16109576-16109595 | None:intergenic | 40.0% |
| ! | GCTGCAATGATGGAATTCAA+AGG | + | chr8.2:16110543-16110562 | MS.gene033041:CDS | 40.0% |
| ! | GGATTAGTGAACAAGATGGT+TGG | + | chr8.2:16110405-16110424 | MS.gene033041:CDS | 40.0% |
| ! | TGAGAGCTTTGACACCAATT+TGG | - | chr8.2:16107528-16107547 | None:intergenic | 40.0% |
| ! | TGGTGTTTCTGTTTCACTCT+TGG | - | chr8.2:16110298-16110317 | None:intergenic | 40.0% |
| ! | TGTTGTGAATGCCGTTTCTT+TGG | + | chr8.2:16107967-16107986 | MS.gene033041:CDS | 40.0% |
| ! | TTCTTTGGCTCGTTTGGTTA+TGG | + | chr8.2:16107982-16108001 | MS.gene033041:CDS | 40.0% |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | + | chr8.2:16109233-16109252 | MS.gene033041:intron | 40.0% |
| !! | TATATGTGTTGGTGTCGTGT+CGG | - | chr8.2:16107665-16107684 | None:intergenic | 40.0% |
| !!! | AAGTAGCCTTATTTTGCAGG+GGG | + | chr8.2:16110043-16110062 | MS.gene033041:intron | 40.0% |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | - | chr8.2:16109705-16109724 | None:intergenic | 40.0% |
| !!! | CAAGTAGCCTTATTTTGCAG+GGG | + | chr8.2:16110042-16110061 | MS.gene033041:intron | 40.0% |
| AACGCCTTATCCCACTAAGT+GGG | + | chr8.2:16108563-16108582 | MS.gene033041:intron | 45.0% | |
| AAGAGATGTGGCTGCAATGA+TGG | + | chr8.2:16110533-16110552 | MS.gene033041:CDS | 45.0% | |
| AAGGCGAAGCAATAATACGC+GGG | + | chr8.2:16110502-16110521 | MS.gene033041:CDS | 45.0% | |
| AAGTGAATATGGGATGTCGC+CGG | - | chr8.2:16107458-16107477 | None:intergenic | 45.0% | |
| AAGTTCAACGACGTCTAGAG+GGG | - | chr8.2:16107563-16107582 | None:intergenic | 45.0% | |
| ACAAGTTCAACGACGTCTAG+AGG | - | chr8.2:16107565-16107584 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr8.2:16108963-16108982 | None:intergenic | 45.0% | |
| AGTCGAGGAAGGAGTTAAAC+GGG | - | chr8.2:16109303-16109322 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr8.2:16109072-16109091 | None:intergenic | 45.0% | |
| CAAGTTCAACGACGTCTAGA+GGG | - | chr8.2:16107564-16107583 | None:intergenic | 45.0% | |
| CATCCCATATTCACTTCCAC+CGG | + | chr8.2:16107462-16107481 | MS.gene033041:CDS | 45.0% | |
| CATTTCAACCGTGCCTTTGT+TGG | - | chr8.2:16107888-16107907 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr8.2:16108915-16108934 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr8.2:16108918-16108937 | MS.gene033041:intron | 45.0% | |
| CTAGCTTCTGCAACATCAAC+CGG | + | chr8.2:16110381-16110400 | MS.gene033041:CDS | 45.0% | |
| CTGCGATGTGATCGCAATTA+AGG | - | chr8.2:16108512-16108531 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr8.2:16109030-16109049 | MS.gene033041:intron | 45.0% | |
| GAGTCGAGGAAGGAGTTAAA+CGG | - | chr8.2:16109304-16109323 | None:intergenic | 45.0% | |
| GATAGTCAACTCGGAACTGT+TGG | + | chr8.2:16110330-16110349 | MS.gene033041:CDS | 45.0% | |
| GATCATTAGAGAGAGAGTGG+GGG | - | chr8.2:16108834-16108853 | None:intergenic | 45.0% | |
| GCACAAACACTCCACAGTTT+AGG | + | chr8.2:16107624-16107643 | MS.gene033041:intron | 45.0% | |
| GCAGTTTCTGCAACAGGTAA+AGG | + | chr8.2:16110483-16110502 | MS.gene033041:CDS | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | - | chr8.2:16108769-16108788 | None:intergenic | 45.0% | |
| GTTCCGGTGGAAGTGAATAT+GGG | - | chr8.2:16107468-16107487 | None:intergenic | 45.0% | |
| TACTGAAGATGGCTACTCAG+AGG | + | chr8.2:16110701-16110720 | MS.gene033041:CDS | 45.0% | |
| TATGTTCCAGCACCTATGAG+TGG | - | chr8.2:16110447-16110466 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr8.2:16108959-16108978 | MS.gene033041:intron | 45.0% | |
| TCTCAACCCCCTGCAAAATA+AGG | - | chr8.2:16110052-16110071 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr8.2:16108955-16108974 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr8.2:16109063-16109082 | None:intergenic | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr8.2:16109049-16109068 | None:intergenic | 45.0% | |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | - | chr8.2:16109566-16109585 | None:intergenic | 45.0% |
| ! | AGAGCTTGTGCTACTGAAGA+TGG | + | chr8.2:16110690-16110709 | MS.gene033041:CDS | 45.0% |
| ! | CAACAAAGGCACGGTTGAAA+TGG | + | chr8.2:16107886-16107905 | MS.gene033041:CDS | 45.0% |
| ! | GAGCTTTGACACCAATTTGG+AGG | - | chr8.2:16107525-16107544 | None:intergenic | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | - | chr8.2:16109328-16109347 | None:intergenic | 45.0% |
| ! | GCTACTCAGAGGTTGCTATT+TGG | + | chr8.2:16110712-16110731 | MS.gene033041:CDS | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr8.2:16108954-16108973 | None:intergenic | 45.0% |
| !! | ATGAAATGTGGTGCTGTGTC+TGG | + | chr8.2:16107935-16107954 | MS.gene033041:CDS | 45.0% |
| !! | CGGTGGATTAGTGAACAAGA+TGG | + | chr8.2:16110401-16110420 | MS.gene033041:CDS | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | + | chr8.2:16109356-16109375 | MS.gene033041:intron | 45.0% |
| !!! | TTTGGCTTTTGATGGTGCTG+AGG | + | chr8.2:16108024-16108043 | MS.gene033041:CDS | 45.0% |
| AAGCCCCCTCATACATATCC+TGG | + | chr8.2:16109503-16109522 | MS.gene033041:intron | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | + | chr8.2:16109419-16109438 | MS.gene033041:intron | 50.0% | |
| ACCATACCAACAGTGCCCTT+TGG | - | chr8.2:16110615-16110634 | None:intergenic | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | + | chr8.2:16108564-16108583 | MS.gene033041:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr8.2:16108887-16108906 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | + | chr8.2:16108562-16108581 | MS.gene033041:intron | 50.0% | |
| CACCAATTTGGAGGCAGTGA+CGG | - | chr8.2:16107516-16107535 | None:intergenic | 50.0% | |
| CCACACTTCAATGCTGGTAG+AGG | + | chr8.2:16107851-16107870 | MS.gene033041:CDS | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | - | chr8.2:16109239-16109258 | None:intergenic | 50.0% | |
| CGTTCCGGTGGAAGTGAATA+TGG | - | chr8.2:16107469-16107488 | None:intergenic | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | - | chr8.2:16109665-16109684 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr8.2:16108568-16108587 | MS.gene033041:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | - | chr8.2:16109554-16109573 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr8.2:16109188-16109207 | None:intergenic | 50.0% | |
| GCGGAGAGTCAGGTTAAAAG+AGG | - | chr8.2:16108710-16108729 | None:intergenic | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | - | chr8.2:16109555-16109574 | None:intergenic | 50.0% | |
| GTACATGAGCGCACACCAAA+GGG | + | chr8.2:16110597-16110616 | MS.gene033041:CDS | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr8.2:16108968-16108987 | None:intergenic | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | - | chr8.2:16109288-16109307 | None:intergenic | 50.0% | |
| TCCACAGTTTAGGCTTGTCC+CGG | + | chr8.2:16107634-16107653 | MS.gene033041:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr8.2:16108742-16108761 | MS.gene033041:intron | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | - | chr8.2:16109556-16109575 | None:intergenic | 50.0% | |
| TGTACATGAGCGCACACCAA+AGG | + | chr8.2:16110596-16110615 | MS.gene033041:CDS | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr8.2:16108907-16108926 | None:intergenic | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | - | chr8.2:16109265-16109284 | None:intergenic | 50.0% |
| ! | CCTCTACCAGCATTGAAGTG+TGG | - | chr8.2:16107854-16107873 | None:intergenic | 50.0% |
| ! | GGTTGGGCAATAGCTCTACA+CGG | + | chr8.2:16107427-16107446 | MS.gene033041:CDS | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | - | chr8.2:16109318-16109337 | None:intergenic | 50.0% |
| ! | TCGTGTCACTGTTCATGTCG+TGG | + | chr8.2:16107729-16107748 | MS.gene033041:intron | 50.0% |
| ! | TGCCGTTTCTTTGGCTCGTT+TGG | + | chr8.2:16107976-16107995 | MS.gene033041:CDS | 50.0% |
| !! | ACCAAAGGGCACTGTTGGTA+TGG | + | chr8.2:16110611-16110630 | MS.gene033041:CDS | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | + | chr8.2:16109236-16109255 | MS.gene033041:intron | 50.0% |
| ACCGGGACAAGCCTAAACTG+TGG | - | chr8.2:16107638-16107657 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8.2:16108576-16108595 | MS.gene033041:intron | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | - | chr8.2:16109481-16109500 | None:intergenic | 55.0% | |
| AGATCAAAGGGCGGAGAGTC+AGG | - | chr8.2:16108720-16108739 | None:intergenic | 55.0% | |
| ATGGTTGCTGTGTCTGCTGC+TGG | + | chr8.2:16110630-16110649 | MS.gene033041:CDS | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr8.2:16108577-16108596 | None:intergenic | 55.0% | |
| ATTGGCGACACGCCACTCAT+AGG | + | chr8.2:16110432-16110451 | MS.gene033041:CDS | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | + | chr8.2:16109546-16109565 | MS.gene033041:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr8.2:16108570-16108589 | None:intergenic | 55.0% | |
| CGAGGAAGGAGTTAAACGGG+AGG | - | chr8.2:16109300-16109319 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr8.2:16108895-16108914 | None:intergenic | 55.0% | |
| CGGGACAGTAGCAAGAGATG+TGG | + | chr8.2:16110521-16110540 | MS.gene033041:CDS | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | - | chr8.2:16109480-16109499 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr8.2:16108981-16109000 | None:intergenic | 55.0% | |
| CTCCGTCACTGCCTCCAAAT+TGG | + | chr8.2:16107511-16107530 | MS.gene033041:CDS | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr8.2:16108743-16108762 | MS.gene033041:intron | 55.0% | |
| GAGCTTCTTCGCGTGGTTGA+CGG | - | chr8.2:16107492-16107511 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | + | chr8.2:16109255-16109274 | MS.gene033041:intron | 55.0% | |
| GCTTCTGCAACATCAACCGG+TGG | + | chr8.2:16110384-16110403 | MS.gene033041:CDS | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | - | chr8.2:16109479-16109498 | None:intergenic | 55.0% | |
| TATGCCTGGGAGGTCGACTA+TGG | - | chr8.2:16109695-16109714 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | + | chr8.2:16109545-16109564 | MS.gene033041:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr8.2:16108576-16108595 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | - | chr8.2:16109485-16109504 | None:intergenic | 55.0% | |
| ! | CGTGATGGAGCGATATCGGA+CGG | - | chr8.2:16109650-16109669 | None:intergenic | 55.0% |
| ! | CTTGCTTGGTGAGTCGAGGA+AGG | - | chr8.2:16109314-16109333 | None:intergenic | 55.0% |
| ! | GACGCGTGATGGAGCGATAT+CGG | - | chr8.2:16109654-16109673 | None:intergenic | 55.0% |
| ! | TGGGCAATAGCTCTACACGG+CGG | + | chr8.2:16107430-16107449 | MS.gene033041:CDS | 55.0% |
| ACGGGAGGCTAGAGACTTGG+AGG | - | chr8.2:16109285-16109304 | None:intergenic | 60.0% | |
| AGGACGCAGGATGGGGATAC+CGG | - | chr8.2:16109472-16109491 | None:intergenic | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | - | chr8.2:16109492-16109511 | None:intergenic | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | - | chr8.2:16109549-16109568 | None:intergenic | 60.0% | |
| GACACGCCACTCATAGGTGC+TGG | + | chr8.2:16110438-16110457 | MS.gene033041:CDS | 60.0% | |
| GACGTCTAGAGGGGCCATGT+TGG | - | chr8.2:16107554-16107573 | None:intergenic | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | + | chr8.2:16109688-16109707 | MS.gene033041:intron | 60.0% | |
| TGACGGAGAGCTTCTTCGCG+TGG | - | chr8.2:16107499-16107518 | None:intergenic | 60.0% | |
| !! | CGCACACCAAAGGGCACTGT+TGG | + | chr8.2:16110606-16110625 | MS.gene033041:CDS | 60.0% |
| !! | TGGTGTCGTGTCGGTGTCAC+CGG | - | chr8.2:16107656-16107675 | None:intergenic | 60.0% |
| TCGCGTGGTTGACGGCGTTC+CGG | - | chr8.2:16107484-16107503 | None:intergenic | 65.0% | |
| ! | ATAGCTCTACACGGCGGCGC+CGG | + | chr8.2:16107436-16107455 | MS.gene033041:CDS | 65.0% |
| !! | GGTGTCGTGTCGGTGTCACC+GGG | - | chr8.2:16107655-16107674 | None:intergenic | 65.0% |
| CGTGGTTGACGGCGTTCCGG+TGG | - | chr8.2:16107481-16107500 | None:intergenic | 70.0% | |
| GAGAAGGCCCGTAGACGCCG+TGG | - | chr8.2:16108753-16108772 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 16107424 | 16110755 | 16107424 | ID=MS.gene033041 |
| chr8.2 | mRNA | 16107424 | 16110755 | 16107424 | ID=MS.gene033041.t1;Parent=MS.gene033041 |
| chr8.2 | exon | 16107424 | 16107585 | 16107424 | ID=MS.gene033041.t1.exon1;Parent=MS.gene033041.t1 |
| chr8.2 | CDS | 16107424 | 16107585 | 16107424 | ID=cds.MS.gene033041.t1;Parent=MS.gene033041.t1 |
| chr8.2 | exon | 16107830 | 16108063 | 16107830 | ID=MS.gene033041.t1.exon2;Parent=MS.gene033041.t1 |
| chr8.2 | CDS | 16107830 | 16108063 | 16107830 | ID=cds.MS.gene033041.t1;Parent=MS.gene033041.t1 |
| chr8.2 | exon | 16110062 | 16110148 | 16110062 | ID=MS.gene033041.t1.exon3;Parent=MS.gene033041.t1 |
| chr8.2 | CDS | 16110062 | 16110148 | 16110062 | ID=cds.MS.gene033041.t1;Parent=MS.gene033041.t1 |
| chr8.2 | exon | 16110261 | 16110755 | 16110261 | ID=MS.gene033041.t1.exon4;Parent=MS.gene033041.t1 |
| chr8.2 | CDS | 16110261 | 16110755 | 16110261 | ID=cds.MS.gene033041.t1;Parent=MS.gene033041.t1 |
| Gene Sequence |
| Protein sequence |
