Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74984.t1 | XP_003597689.1 | 90.1 | 517 | 51 | 0 | 11 | 527 | 15 | 531 | 1.70E-252 | 881.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74984.t1 | Q93Y22 | 74.4 | 519 | 125 | 5 | 11 | 527 | 15 | 527 | 9.1e-199 | 694.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74984.t1 | G7II11 | 90.1 | 517 | 51 | 0 | 11 | 527 | 15 | 531 | 1.2e-252 | 881.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053108 | MS.gene74984 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene74984 | 0.804412 | 2.19E-49 | -1.69E-46 |
| MS.gene055616 | MS.gene74984 | 0.808063 | 3.72E-50 | -1.69E-46 |
| MS.gene05652 | MS.gene74984 | 0.806601 | 7.60E-50 | -1.69E-46 |
| MS.gene056678 | MS.gene74984 | 0.828847 | 7.16E-55 | -1.69E-46 |
| MS.gene060636 | MS.gene74984 | 0.801923 | 7.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74984 | MS.gene45686 | PPI |
| MS.gene74984 | MS.gene68093 | PPI |
| MS.gene74984 | MS.gene68223 | PPI |
| MS.gene014282 | MS.gene74984 | PPI |
| MS.gene74984 | MS.gene064893 | PPI |
| MS.gene74984 | MS.gene003223 | PPI |
| MS.gene74984 | MS.gene062888 | PPI |
| MS.gene034150 | MS.gene74984 | PPI |
| MS.gene74984 | MS.gene056700 | PPI |
| MS.gene053143 | MS.gene74984 | PPI |
| MS.gene74984 | MS.gene38302 | PPI |
| MS.gene74984 | MS.gene02789 | PPI |
| MS.gene74984 | MS.gene02023 | PPI |
| MS.gene74984 | MS.gene74608 | PPI |
| MS.gene74984 | MS.gene23325 | PPI |
| MS.gene74984 | MS.gene50735 | PPI |
| MS.gene003673 | MS.gene74984 | PPI |
| MS.gene74984 | MS.gene063166 | PPI |
| MS.gene003764 | MS.gene74984 | PPI |
| MS.gene74984 | MS.gene50077 | PPI |
| MS.gene74984 | MS.gene054585 | PPI |
| MS.gene74984 | MS.gene005784 | PPI |
| MS.gene21432 | MS.gene74984 | PPI |
| MS.gene74984 | MS.gene032230 | PPI |
| MS.gene74984 | MS.gene003672 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74984.t1 | MTR_2g101180 | 94.971 | 517 | 26 | 0 | 11 | 527 | 15 | 531 | 0.0 | 1002 |
| MS.gene74984.t1 | MTR_1g111910 | 92.424 | 396 | 28 | 2 | 132 | 527 | 1 | 394 | 0.0 | 718 |
| MS.gene74984.t1 | MTR_1g111900 | 87.260 | 416 | 12 | 3 | 112 | 527 | 24 | 398 | 0.0 | 702 |
| MS.gene74984.t1 | MTR_1g111910 | 92.814 | 334 | 23 | 1 | 132 | 465 | 1 | 333 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74984.t1 | AT5G05010 | 73.796 | 519 | 128 | 5 | 11 | 527 | 15 | 527 | 0.0 | 767 |
| MS.gene74984.t1 | AT5G05010 | 73.796 | 519 | 128 | 5 | 11 | 527 | 15 | 527 | 0.0 | 767 |
Find 131 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTCTTGGTTAAGAATT+TGG | 0.109257 | 1.3:+75927209 | None:intergenic |
| CTGTGTTCTCTGAGCATATT+TGG | 0.189831 | 1.3:+75924549 | None:intergenic |
| CTTGAATATGTCCATCTTCT+TGG | 0.211819 | 1.3:+75927197 | None:intergenic |
| TCTAGCAGTGGAACTGGTTT+TGG | 0.235664 | 1.3:-75927702 | MS.gene74984:CDS |
| TTTGGAAGTGGCTCTGGTTT+TGG | 0.245009 | 1.3:-75927684 | MS.gene74984:CDS |
| AACTGTTGGCCCTCTTCTTC+TGG | 0.278840 | 1.3:-75925642 | MS.gene74984:CDS |
| AATAACTCTTTATTCATGTT+AGG | 0.288485 | 1.3:+75925886 | None:intergenic |
| TCAAGGGAATAAGAATATTC+AGG | 0.290822 | 1.3:+75928135 | None:intergenic |
| GTCCTAGACTGGCCAAGTTT+TGG | 0.298368 | 1.3:+75927346 | None:intergenic |
| TACAAACATCATACCACTTA+AGG | 0.306927 | 1.3:-75924584 | MS.gene74984:CDS |
| TTTCAGAAAGAATACAAGTT+TGG | 0.329519 | 1.3:+75928549 | None:intergenic |
| GAGCAACATACTGGAAGATT+TGG | 0.339702 | 1.3:-75928590 | MS.gene74984:CDS |
| GAAAAGAATAGAGGTGATAA+AGG | 0.356831 | 1.3:-75927792 | MS.gene74984:CDS |
| CCAGATCCCATTGACGTTAA+CGG | 0.360280 | 1.3:+75927759 | None:intergenic |
| TGCCGTAAAACGAACTGAAA+TGG | 0.366753 | 1.3:+75924936 | None:intergenic |
| AGATGGACATATTCAAGTTC+AGG | 0.371232 | 1.3:-75927191 | MS.gene74984:intron |
| ACAGCATTTCCCAAGTTGAT+AGG | 0.372980 | 1.3:-75928709 | MS.gene74984:CDS |
| TTTGATGAAGTCATCTCTCT+TGG | 0.376116 | 1.3:-75928069 | MS.gene74984:CDS |
| CTTTGGTCCGTTAACGTCAA+TGG | 0.381100 | 1.3:-75927766 | MS.gene74984:CDS |
| TGGCTTGATTATCACCAGTT+TGG | 0.383291 | 1.3:+75925926 | None:intergenic |
| TTATGTCAGCATTGAATATG+AGG | 0.408842 | 1.3:-75925610 | MS.gene74984:CDS |
| ACCTTTAGGCTTGGTAGAAA+AGG | 0.412806 | 1.3:+75927638 | None:intergenic |
| ATAACTCTTTATTCATGTTA+GGG | 0.412906 | 1.3:+75925887 | None:intergenic |
| ACCAACACCGGCGGCATCAC+TGG | 0.413982 | 1.3:+75925804 | None:intergenic |
| TGTGTTCTCTGAGCATATTT+GGG | 0.417674 | 1.3:+75924550 | None:intergenic |
| TCTGAGGAATGTTGTGGTTT+CGG | 0.419247 | 1.3:-75925571 | MS.gene74984:CDS |
| GCCAGTGATGCCGCCGGTGT+TGG | 0.419520 | 1.3:-75925805 | MS.gene74984:CDS |
| ATCTGCCACTGCTCCGCCAA+AGG | 0.420373 | 1.3:-75927461 | MS.gene74984:CDS |
| TAAGAATTTGGAGAGACAAT+TGG | 0.421054 | 1.3:+75927221 | None:intergenic |
| AGAGGTGATAAAGGAGGCTT+TGG | 0.422652 | 1.3:-75927783 | MS.gene74984:CDS |
| GTGGGGCAGCTGTCCTAGAC+TGG | 0.429267 | 1.3:+75927335 | None:intergenic |
| CCATCTGTTAGTCAGATTGA+TGG | 0.431274 | 1.3:-75925522 | MS.gene74984:CDS |
| TTTCCCAGTGCCTATCAACT+TGG | 0.434831 | 1.3:+75928699 | None:intergenic |
| GCTAGTCTCTAGACAGTTTG+TGG | 0.435076 | 1.3:-75928764 | MS.gene74984:CDS |
| AAACAAACAGAGCAACATAC+TGG | 0.436197 | 1.3:-75928599 | MS.gene74984:CDS |
| GACTAACAGATGGTGCTTCT+CGG | 0.439604 | 1.3:+75925532 | None:intergenic |
| CCAGTGGGGAAAGGCCTGTT+GGG | 0.443467 | 1.3:+75925832 | None:intergenic |
| CCGTTAACGTCAATGGGATC+TGG | 0.444335 | 1.3:-75927759 | MS.gene74984:CDS |
| ACTGCTCCGCCAAAGGGTCT+TGG | 0.445125 | 1.3:-75927454 | MS.gene74984:CDS |
| GAAGTTGTTCAGCCAAAACT+TGG | 0.446093 | 1.3:-75927358 | MS.gene74984:CDS |
| AGCATATCTAGCAGTGGAAC+TGG | 0.447231 | 1.3:-75927708 | MS.gene74984:CDS |
| CGAATATATACTAGGTCTAA+AGG | 0.450556 | 1.3:-75925857 | MS.gene74984:CDS |
| TTTCCCAAGTTGATAGGCAC+TGG | 0.451489 | 1.3:-75928703 | MS.gene74984:CDS |
| GCCGTAAAACGAACTGAAAT+GGG | 0.454944 | 1.3:+75924937 | None:intergenic |
| AGCTTCATACCAAGACCCTT+TGG | 0.456960 | 1.3:+75927445 | None:intergenic |
| TCTGCCACTGCTCCGCCAAA+GGG | 0.459753 | 1.3:-75927460 | MS.gene74984:CDS |
| TTTGGTCCGTTAACGTCAAT+GGG | 0.461560 | 1.3:-75927765 | MS.gene74984:CDS |
| GGGAAAGAATGCTGATGAAT+CGG | 0.468736 | 1.3:+75924957 | None:intergenic |
| TTGATGAAGTCATCTCTCTT+GGG | 0.471175 | 1.3:-75928068 | MS.gene74984:CDS |
| GTTCAGATTGAAAAGAATAG+AGG | 0.475721 | 1.3:-75927801 | MS.gene74984:intron |
| GATGGTGCTTCTCGGAGAGC+TGG | 0.477636 | 1.3:+75925540 | None:intergenic |
| CAAATTCTTAACCAAGAAGA+TGG | 0.481738 | 1.3:-75927208 | MS.gene74984:CDS |
| GTTTGTTTGTTACAAGAAGC+AGG | 0.489618 | 1.3:+75928614 | None:intergenic |
| TCCTCAACAGTTAAAGTGAC+CGG | 0.492542 | 1.3:+75927301 | None:intergenic |
| TAGACCTAGTATATATTCGT+TGG | 0.492607 | 1.3:+75925861 | None:intergenic |
| TGACTCTAGGAATTCCATCT+TGG | 0.501538 | 1.3:-75925153 | MS.gene74984:CDS |
| TTAGTCAGATTGATGGAGAA+TGG | 0.504506 | 1.3:-75925515 | MS.gene74984:CDS |
| CAAGGGAATAAGAATATTCA+GGG | 0.504878 | 1.3:+75928136 | None:intergenic |
| ACAAACATCATACCACTTAA+GGG | 0.509720 | 1.3:-75924583 | MS.gene74984:CDS |
| CCCAACAGGCCTTTCCCCAC+TGG | 0.515516 | 1.3:-75925832 | MS.gene74984:CDS |
| TTTCTAATGCAGTCAACTGT+TGG | 0.516277 | 1.3:-75925656 | MS.gene74984:intron |
| TGCAGATACCCTCTTCGTCA+AGG | 0.516625 | 1.3:+75928118 | None:intergenic |
| TGCCCCACCACTTACAGATC+CGG | 0.517039 | 1.3:-75927320 | MS.gene74984:CDS |
| GGCATCACTGGCTTGACCAG+TGG | 0.517182 | 1.3:+75925816 | None:intergenic |
| GCAGAGCACCGATGAGTCAA+TGG | 0.518908 | 1.3:-75925764 | MS.gene74984:CDS |
| CGAAGAAAAGCTTTACAAGC+TGG | 0.519651 | 1.3:-75927989 | MS.gene74984:CDS |
| TCCGGTCACTTTAACTGTTG+AGG | 0.521260 | 1.3:-75927302 | MS.gene74984:CDS |
| GAGCAAGGTCAATGAAACTA+AGG | 0.523675 | 1.3:-75927959 | MS.gene74984:CDS |
| TTGGAATCGTTGAAAGCAGA+AGG | 0.527051 | 1.3:-75927394 | MS.gene74984:CDS |
| TAGGTCTAAAGGATCCCAAC+AGG | 0.527324 | 1.3:-75925846 | MS.gene74984:CDS |
| ACCAGTGGGGAAAGGCCTGT+TGG | 0.527981 | 1.3:+75925831 | None:intergenic |
| AGTCATCTCTCTTGGGCACA+AGG | 0.529363 | 1.3:-75928061 | MS.gene74984:CDS |
| TTCCCAGTGCCTATCAACTT+GGG | 0.533942 | 1.3:+75928700 | None:intergenic |
| CAGCGGCACCATTGACTCAT+CGG | 0.534057 | 1.3:+75925756 | None:intergenic |
| GGCTTTGCAGGTATGACTCT+AGG | 0.534133 | 1.3:-75925166 | MS.gene74984:intron |
| TATATTTGGCAGTGGGTCGA+TGG | 0.534191 | 1.3:-75924998 | MS.gene74984:intron |
| GCATCACTGGCTTGACCAGT+GGG | 0.537469 | 1.3:+75925817 | None:intergenic |
| GGAGGATTACCACCCTTAAG+TGG | 0.539563 | 1.3:+75924571 | None:intergenic |
| GACAGTTTGTGGATATGTCT+CGG | 0.541129 | 1.3:-75928753 | MS.gene74984:CDS |
| ATGTCTCGGATAAGAATTGA+GGG | 0.545450 | 1.3:-75928739 | MS.gene74984:CDS |
| TGACAACCAACCTTTAGGCT+TGG | 0.549250 | 1.3:+75927629 | None:intergenic |
| AAGGGTCTTGGTATGAAGCT+TGG | 0.552053 | 1.3:-75927442 | MS.gene74984:CDS |
| TGATTGATAATTCAAATCGC+AGG | 0.552733 | 1.3:-75925115 | MS.gene74984:intron |
| CTGGCTTGACCAGTGGGGAA+AGG | 0.553289 | 1.3:+75925823 | None:intergenic |
| TTCATACCAAGACCCTTTGG+CGG | 0.558674 | 1.3:+75927448 | None:intergenic |
| CTTCATCAATGTTTGATCTG+AGG | 0.560280 | 1.3:-75925587 | MS.gene74984:CDS |
| GTTCTCTGAGCATATTTGGG+AGG | 0.564000 | 1.3:+75924553 | None:intergenic |
| TGACCGGATCTGTAAGTGGT+GGG | 0.568365 | 1.3:+75927317 | None:intergenic |
| GGAGCAGTGGCAGATGCAGT+TGG | 0.569546 | 1.3:+75927469 | None:intergenic |
| GCAGATACCCTCTTCGTCAA+GGG | 0.569720 | 1.3:+75928119 | None:intergenic |
| AGCAGGTACAGAGCTTCTAT+CGG | 0.569923 | 1.3:+75928631 | None:intergenic |
| TCTTATTCCCTTGACGAAGA+GGG | 0.573537 | 1.3:-75928126 | MS.gene74984:CDS |
| TTTGCCAACGAATATATACT+AGG | 0.575476 | 1.3:-75925865 | MS.gene74984:CDS |
| AGTTAAGCAATACTGTGAGA+TGG | 0.575944 | 1.3:-75928019 | MS.gene74984:CDS |
| AAGAATAGAGGTGATAAAGG+AGG | 0.578057 | 1.3:-75927789 | MS.gene74984:CDS |
| AATGCTGATGAATCGGCTTG+TGG | 0.578310 | 1.3:+75924964 | None:intergenic |
| CAGTGGCAGATGCAGTTGGA+CGG | 0.580800 | 1.3:+75927473 | None:intergenic |
| TTCTTATTCCCTTGACGAAG+AGG | 0.581992 | 1.3:-75928127 | MS.gene74984:CDS |
| AAGGACAGTCCACTCCAAGA+TGG | 0.582320 | 1.3:+75925139 | None:intergenic |
| AAGACCCTTTGGCGGAGCAG+TGG | 0.583230 | 1.3:+75927456 | None:intergenic |
| TTCCCAAGTTGATAGGCACT+GGG | 0.584126 | 1.3:-75928702 | MS.gene74984:CDS |
| TATGTCTCGGATAAGAATTG+AGG | 0.588463 | 1.3:-75928740 | MS.gene74984:CDS |
| AGCCAAAACTTGGCCAGTCT+AGG | 0.590136 | 1.3:-75927348 | MS.gene74984:CDS |
| CCATCAATCTGACTAACAGA+TGG | 0.595071 | 1.3:+75925522 | None:intergenic |
| TGATACATTTAGTGACCTGA+AGG | 0.595305 | 1.3:-75924911 | MS.gene74984:intron |
| GCTTCTCGGAGAGCTGGAAG+AGG | 0.598962 | 1.3:+75925546 | None:intergenic |
| CAAGCTGGTTCAGCAGAGCA+AGG | 0.602199 | 1.3:-75927974 | MS.gene74984:CDS |
| GACCGGATCTGTAAGTGGTG+GGG | 0.605221 | 1.3:+75927318 | None:intergenic |
| GTTTGATCTGAGGAATGTTG+TGG | 0.605658 | 1.3:-75925577 | MS.gene74984:CDS |
| CCACTTTAAAAGACCAACAC+CGG | 0.605688 | 1.3:+75925792 | None:intergenic |
| AAAGGAATCAACATCAGTTG+TGG | 0.606188 | 1.3:+75927656 | None:intergenic |
| AAAGTGACCGGATCTGTAAG+TGG | 0.607953 | 1.3:+75927313 | None:intergenic |
| GATTTGAATTATCAATCAGA+AGG | 0.611442 | 1.3:+75925120 | None:intergenic |
| GGTCAAGCCAGTGATGCCGC+CGG | 0.612112 | 1.3:-75925811 | MS.gene74984:CDS |
| AAGTGAGATTGATAAGAGCA+AGG | 0.620080 | 1.3:-75927917 | MS.gene74984:intron |
| GTCAGATTGATGGAGAATGG+AGG | 0.623551 | 1.3:-75925512 | MS.gene74984:intron |
| GTGACCGGATCTGTAAGTGG+TGG | 0.625034 | 1.3:+75927316 | None:intergenic |
| AGTCTCGTTTCCAGAAGAAG+AGG | 0.627045 | 1.3:+75925632 | None:intergenic |
| AATGTCACACTAAAACGAGA+TGG | 0.630100 | 1.3:-75927271 | MS.gene74984:CDS |
| ATCGTTGAAAGCAGAAGGTG+AGG | 0.632089 | 1.3:-75927389 | MS.gene74984:CDS |
| GTATTGCTTAACTTGTGCAA+CGG | 0.634970 | 1.3:+75928029 | None:intergenic |
| AAACTAAGGATCTTATGAAG+CGG | 0.636182 | 1.3:-75927945 | MS.gene74984:CDS |
| CTAGGAATTCCATCTTGGAG+TGG | 0.636941 | 1.3:-75925148 | MS.gene74984:CDS |
| GTCTCGTTTCCAGAAGAAGA+GGG | 0.649029 | 1.3:+75925633 | None:intergenic |
| GATATGAGCATATCTAGCAG+TGG | 0.667660 | 1.3:-75927714 | MS.gene74984:CDS |
| GTCACACTAAAACGAGATGG+CGG | 0.686876 | 1.3:-75927268 | MS.gene74984:CDS |
| AACATCATACCACTTAAGGG+TGG | 0.688096 | 1.3:-75924580 | MS.gene74984:CDS |
| CTTTAAAAGACCAACACCGG+CGG | 0.688739 | 1.3:+75925795 | None:intergenic |
| AGGGTGTGTCTTGAAAGAGA+TGG | 0.696577 | 1.3:+75925906 | None:intergenic |
| GATGTTAACTCACTTGTCAG+CGG | 0.717510 | 1.3:+75925739 | None:intergenic |
| CATCACTGGCTTGACCAGTG+GGG | 0.736650 | 1.3:+75925818 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAAGATAATAAC+AGG | + | chr1.3:75928264-75928283 | None:intergenic | 10.0% |
| !! | TAAATGAAATATGTTAATAT+GGG | - | chr1.3:75926951-75926970 | MS.gene74984:intron | 10.0% |
| !! | TGACAAAAAAATTAATTTAA+GGG | + | chr1.3:75925105-75925124 | None:intergenic | 10.0% |
| !! | TTGACAAAAAAATTAATTTA+AGG | + | chr1.3:75925106-75925125 | None:intergenic | 10.0% |
| !!! | GTTATTATCTTTATTTTTAT+TGG | - | chr1.3:75928264-75928283 | MS.gene74984:intron | 10.0% |
| !! | ATGTACAAAAAAAAAAAAAC+TGG | + | chr1.3:75927241-75927260 | None:intergenic | 15.0% |
| !! | GATAATATTTAAAAATCAGT+CGG | - | chr1.3:75926412-75926431 | MS.gene74984:intron | 15.0% |
| !! | GTAAATGAAATATGTTAATA+TGG | - | chr1.3:75926950-75926969 | MS.gene74984:intron | 15.0% |
| !! | TATATTGAAAATTGTATTTC+CGG | + | chr1.3:75927159-75927178 | None:intergenic | 15.0% |
| !! | TTGTCTGATTATAATATATT+TGG | - | chr1.3:75928303-75928322 | MS.gene74984:intron | 15.0% |
| !!! | GTTCATTACTTAATATTTTT+AGG | - | chr1.3:75925155-75925174 | MS.gene74984:CDS | 15.0% |
| !!! | TATTGAATTTTATAAGGTTT+AGG | - | chr1.3:75925023-75925042 | MS.gene74984:intron | 15.0% |
| !!! | TTGGTATATTGAATTTTATA+AGG | - | chr1.3:75925017-75925036 | MS.gene74984:intron | 15.0% |
| !!! | TTTTTTAGCTAGATTTTTTA+AGG | - | chr1.3:75926475-75926494 | MS.gene74984:intron | 15.0% |
| !! | AATAACTCTTTATTCATGTT+AGG | + | chr1.3:75927432-75927451 | None:intergenic | 20.0% |
| !! | AATTATTCAAAATGAATTCC+TGG | + | chr1.3:75926206-75926225 | None:intergenic | 20.0% |
| !! | ACCAATCAATTGAAAATAAA+TGG | + | chr1.3:75924793-75924812 | None:intergenic | 20.0% |
| !! | ATAACTCTTTATTCATGTTA+GGG | + | chr1.3:75927431-75927450 | None:intergenic | 20.0% |
| !! | ATATTGAAAATTGTATTTCC+GGG | + | chr1.3:75927158-75927177 | None:intergenic | 20.0% |
| !! | ATTATAATATATTTGGCAGT+GGG | - | chr1.3:75928310-75928329 | MS.gene74984:intron | 20.0% |
| !! | CTAATTCAAACAAATTTAGT+TGG | + | chr1.3:75927972-75927991 | None:intergenic | 20.0% |
| !! | TTTGTTTGAATTAGAATGTT+CGG | - | chr1.3:75927978-75927997 | MS.gene74984:CDS | 20.0% |
| !!! | ATTGATGAAATTGTTTTTAG+TGG | - | chr1.3:75925046-75925065 | MS.gene74984:intron | 20.0% |
| !!! | CAGAATGAATAAGAAATTTT+AGG | + | chr1.3:75927266-75927285 | None:intergenic | 20.0% |
| !!! | TAATTGATTTATTTGAACCA+AGG | + | chr1.3:75926448-75926467 | None:intergenic | 20.0% |
| !!! | TCCATTTATTTTCAATTGAT+TGG | - | chr1.3:75924789-75924808 | MS.gene74984:intron | 20.0% |
| !!! | TTCAGTACATTGAATTTTAT+AGG | - | chr1.3:75924991-75925010 | MS.gene74984:intron | 20.0% |
| !!! | TTCATTTTTTTCTTCATCAT+GGG | + | chr1.3:75927126-75927145 | None:intergenic | 20.0% |
| !!! | TTGATGAAATTGTTTTTAGT+GGG | - | chr1.3:75925047-75925066 | MS.gene74984:intron | 20.0% |
| !!! | TTTTAATCACATCATCATTT+GGG | - | chr1.3:75926258-75926277 | MS.gene74984:intron | 20.0% |
| !!! | TTTTTTTTTTCCTTTCTTTC+TGG | - | chr1.3:75928438-75928457 | MS.gene74984:intron | 20.0% |
| ! | AAAATGAAGAAATGAAGCTT+AGG | + | chr1.3:75924962-75924981 | None:intergenic | 25.0% |
| ! | AAGCTATCATTAATTCTGTT+AGG | - | chr1.3:75926744-75926763 | MS.gene74984:intron | 25.0% |
| ! | ACAAAAAGCAAAAGGTTTAT+TGG | + | chr1.3:75924525-75924544 | None:intergenic | 25.0% |
| ! | AGTGATATATGCATACAAAA+AGG | + | chr1.3:75927321-75927340 | None:intergenic | 25.0% |
| ! | ATGAAAAGATTACCCTTTAT+AGG | + | chr1.3:75925793-75925812 | None:intergenic | 25.0% |
| ! | ATTCAAACAAATTTAGTTGG+TGG | + | chr1.3:75927969-75927988 | None:intergenic | 25.0% |
| ! | CTCTAATTCTGCAATAAAAT+TGG | - | chr1.3:75928128-75928147 | MS.gene74984:CDS | 25.0% |
| ! | GAATAACAGTATTCAATTAC+TGG | - | chr1.3:75926625-75926644 | MS.gene74984:intron | 25.0% |
| ! | GATTATAATATATTTGGCAG+TGG | - | chr1.3:75928309-75928328 | MS.gene74984:intron | 25.0% |
| ! | GATTTGAATTATCAATCAGA+AGG | + | chr1.3:75928198-75928217 | None:intergenic | 25.0% |
| ! | GTGATATATGCATACAAAAA+GGG | + | chr1.3:75927320-75927339 | None:intergenic | 25.0% |
| ! | TAGTTAGGGAAGTTAATAAA+AGG | + | chr1.3:75926695-75926714 | None:intergenic | 25.0% |
| ! | TGCTTGAATATTGATGTAAT+GGG | - | chr1.3:75928669-75928688 | MS.gene74984:CDS | 25.0% |
| ! | TTCTGGCATTCAAATTTATT+TGG | - | chr1.3:75928455-75928474 | MS.gene74984:intron | 25.0% |
| ! | TTGCTTGAATATTGATGTAA+TGG | - | chr1.3:75928668-75928687 | MS.gene74984:CDS | 25.0% |
| ! | TTTAATCACATCATCATTTG+GGG | - | chr1.3:75926259-75926278 | MS.gene74984:intron | 25.0% |
| ! | TTTCAGAAAGAATACAAGTT+TGG | + | chr1.3:75924769-75924788 | None:intergenic | 25.0% |
| !! | CATTGAATTTTATAGGTGTT+TGG | - | chr1.3:75924998-75925017 | MS.gene74984:intron | 25.0% |
| !! | CTTTTAATCACATCATCATT+TGG | - | chr1.3:75926257-75926276 | MS.gene74984:intron | 25.0% |
| !! | GCATTAAAACTGATTCAAAA+TGG | + | chr1.3:75925083-75925102 | None:intergenic | 25.0% |
| !! | TAATACCTTACAGGTATTTT+AGG | + | chr1.3:75926995-75927014 | None:intergenic | 25.0% |
| !! | TCAAAAGACAAATCAGTTTT+TGG | - | chr1.3:75925902-75925921 | MS.gene74984:CDS | 25.0% |
| !! | TTCATTTCTTCATTTTCATG+TGG | - | chr1.3:75924966-75924985 | MS.gene74984:CDS | 25.0% |
| !! | TTGATATGTGGTGTATTTTA+GGG | - | chr1.3:75927057-75927076 | MS.gene74984:intron | 25.0% |
| !! | TTTGATATGTGGTGTATTTT+AGG | - | chr1.3:75927056-75927075 | MS.gene74984:intron | 25.0% |
| !! | TTTTTGTATGCATATATCAC+TGG | - | chr1.3:75927320-75927339 | MS.gene74984:CDS | 25.0% |
| !!! | AAGTCATCAATTGATGATTT+TGG | + | chr1.3:75928047-75928066 | None:intergenic | 25.0% |
| !!! | AATCATTTTGGTTACCTATT+TGG | - | chr1.3:75927088-75927107 | MS.gene74984:intron | 25.0% |
| !!! | AGCTTTTTACTTCTGAAAAT+AGG | + | chr1.3:75926583-75926602 | None:intergenic | 25.0% |
| !!! | AGTCATCAATTGATGATTTT+GGG | + | chr1.3:75928046-75928065 | None:intergenic | 25.0% |
| !!! | ATCATTTTGGTTACCTATTT+GGG | - | chr1.3:75927089-75927108 | MS.gene74984:intron | 25.0% |
| !!! | ATTATGTTGCTTTTGATATG+TGG | - | chr1.3:75927045-75927064 | MS.gene74984:intron | 25.0% |
| !!! | CTTCATTTTTTTCTTCATCA+TGG | + | chr1.3:75927127-75927146 | None:intergenic | 25.0% |
| !!! | GTTAGTAATTTTGATGTTCA+AGG | - | chr1.3:75926071-75926090 | MS.gene74984:intron | 25.0% |
| AAACTAAGGATCTTATGAAG+CGG | - | chr1.3:75925370-75925389 | MS.gene74984:intron | 30.0% | |
| AAATTCCCATGATTTACATG+AGG | - | chr1.3:75926340-75926359 | MS.gene74984:intron | 30.0% | |
| AATTAGAGAGCAAGAATGTA+AGG | + | chr1.3:75928116-75928135 | None:intergenic | 30.0% | |
| AATTTGAATGCCAGAAAGAA+AGG | + | chr1.3:75928451-75928470 | None:intergenic | 30.0% | |
| ACAAACATCATACCACTTAA+GGG | - | chr1.3:75928732-75928751 | MS.gene74984:CDS | 30.0% | |
| ACTAAACCTCATGTAAATCA+TGG | + | chr1.3:75926349-75926368 | None:intergenic | 30.0% | |
| ATGAACTGAATATAAGAGCA+AGG | + | chr1.3:75925141-75925160 | None:intergenic | 30.0% | |
| ATTTATGACAACCAACCTTT+AGG | + | chr1.3:75925694-75925713 | None:intergenic | 30.0% | |
| CAAATTCTTAACCAAGAAGA+TGG | - | chr1.3:75926107-75926126 | MS.gene74984:intron | 30.0% | |
| CAAGGGAATAAGAATATTCA+GGG | + | chr1.3:75925182-75925201 | None:intergenic | 30.0% | |
| CATCTTCTTGGTTAAGAATT+TGG | + | chr1.3:75926109-75926128 | None:intergenic | 30.0% | |
| CGAATATATACTAGGTCTAA+AGG | - | chr1.3:75927458-75927477 | MS.gene74984:CDS | 30.0% | |
| CTAAACCTCATGTAAATCAT+GGG | + | chr1.3:75926348-75926367 | None:intergenic | 30.0% | |
| CTACTGTACAACCATTTAAT+AGG | - | chr1.3:75926804-75926823 | MS.gene74984:intron | 30.0% | |
| CTATTAAATGGTTGTACAGT+AGG | + | chr1.3:75926806-75926825 | None:intergenic | 30.0% | |
| CTTTCTCTGAACAATTGTTA+GGG | - | chr1.3:75927845-75927864 | MS.gene74984:intron | 30.0% | |
| GAAAAGAATAGAGGTGATAA+AGG | - | chr1.3:75925523-75925542 | MS.gene74984:CDS | 30.0% | |
| GAAATATGTTAATATGGGTG+TGG | - | chr1.3:75926956-75926975 | MS.gene74984:intron | 30.0% | |
| GTTCAGATTGAAAAGAATAG+AGG | - | chr1.3:75925514-75925533 | MS.gene74984:CDS | 30.0% | |
| TAAGAATTTGGAGAGACAAT+TGG | + | chr1.3:75926097-75926116 | None:intergenic | 30.0% | |
| TACAAACATCATACCACTTA+AGG | - | chr1.3:75928731-75928750 | MS.gene74984:CDS | 30.0% | |
| TAGACCTAGTATATATTCGT+TGG | + | chr1.3:75927457-75927476 | None:intergenic | 30.0% | |
| TAGGGAAGTTAATAAAAGGA+GGG | + | chr1.3:75926691-75926710 | None:intergenic | 30.0% | |
| TCAAGGGAATAAGAATATTC+AGG | + | chr1.3:75925183-75925202 | None:intergenic | 30.0% | |
| TTAAATGTAACGACTGTGAA+TGG | - | chr1.3:75925739-75925758 | MS.gene74984:intron | 30.0% | |
| TTAGGGAAGTTAATAAAAGG+AGG | + | chr1.3:75926692-75926711 | None:intergenic | 30.0% | |
| TTCATTTACTTCTCTCTTTC+AGG | + | chr1.3:75926939-75926958 | None:intergenic | 30.0% | |
| TTCTCAATTTCCTGTCATAT+TGG | - | chr1.3:75924899-75924918 | MS.gene74984:intron | 30.0% | |
| TTTCTCTGAACAATTGTTAG+GGG | - | chr1.3:75927846-75927865 | MS.gene74984:intron | 30.0% | |
| TTTGCCAACGAATATATACT+AGG | - | chr1.3:75927450-75927469 | MS.gene74984:CDS | 30.0% | |
| ! | AACCATGGTTTTTGTGTTTT+GGG | - | chr1.3:75927871-75927890 | MS.gene74984:intron | 30.0% |
| ! | GTGAAACAAATTCTTTTTCC+TGG | - | chr1.3:75926293-75926312 | MS.gene74984:intron | 30.0% |
| ! | TGATTGATAATTCAAATCGC+AGG | - | chr1.3:75928200-75928219 | MS.gene74984:intron | 30.0% |
| ! | TTATGTCAGCATTGAATATG+AGG | - | chr1.3:75927705-75927724 | MS.gene74984:CDS | 30.0% |
| !! | ATCAATTGATGATTTTGGGA+GGG | + | chr1.3:75928042-75928061 | None:intergenic | 30.0% |
| !! | CTTAAGATGAGCTGTTTTAT+GGG | - | chr1.3:75926511-75926530 | MS.gene74984:intron | 30.0% |
| !! | TTTAGTTTGCAGTGATATGT+TGG | - | chr1.3:75926363-75926382 | MS.gene74984:intron | 30.0% |
| !!! | ATGAAATTGTTTTTAGTGGG+AGG | - | chr1.3:75925050-75925069 | MS.gene74984:intron | 30.0% |
| !!! | TCATTTTGGTTACCTATTTG+GGG | - | chr1.3:75927090-75927109 | MS.gene74984:intron | 30.0% |
| AAAAATCCATACGAACCTTC+AGG | + | chr1.3:75928422-75928441 | None:intergenic | 35.0% | |
| AAAAATGAAGAGTTTGTGCC+CGG | - | chr1.3:75927137-75927156 | MS.gene74984:intron | 35.0% | |
| AAACAAACAGAGCAACATAC+TGG | - | chr1.3:75924716-75924735 | MS.gene74984:intron | 35.0% | |
| AAACGCAAAAATCAGCTCAA+AGG | + | chr1.3:75925229-75925248 | None:intergenic | 35.0% | |
| AAAGGAATCAACATCAGTTG+TGG | + | chr1.3:75925662-75925681 | None:intergenic | 35.0% | |
| AAATCGCAGGTATGCTAAAT+TGG | - | chr1.3:75928213-75928232 | MS.gene74984:intron | 35.0% | |
| AACCCAAAACACAAAAACCA+TGG | + | chr1.3:75927876-75927895 | None:intergenic | 35.0% | |
| AAGAATAGAGGTGATAAAGG+AGG | - | chr1.3:75925526-75925545 | MS.gene74984:CDS | 35.0% | |
| AAGTGAGATTGATAAGAGCA+AGG | - | chr1.3:75925398-75925417 | MS.gene74984:intron | 35.0% | |
| AATGTCACACTAAAACGAGA+TGG | - | chr1.3:75926044-75926063 | MS.gene74984:intron | 35.0% | |
| ACTCTACTATTCTCTTCCTT+AGG | - | chr1.3:75925819-75925838 | MS.gene74984:CDS | 35.0% | |
| AGTTAAGCAATACTGTGAGA+TGG | - | chr1.3:75925296-75925315 | MS.gene74984:intron | 35.0% | |
| ATGTCTCGGATAAGAATTGA+GGG | - | chr1.3:75924576-75924595 | MS.gene74984:CDS | 35.0% | |
| CAACCATTTAATAGGTGGTA+TGG | - | chr1.3:75926812-75926831 | MS.gene74984:intron | 35.0% | |
| CAATAGATAACATCTAAGCC+AGG | + | chr1.3:75926314-75926333 | None:intergenic | 35.0% | |
| CCTAACAATTGTTCAGAGAA+AGG | + | chr1.3:75927847-75927866 | None:intergenic | 35.0% | |
| CCTTTCTCTGAACAATTGTT+AGG | - | chr1.3:75927844-75927863 | MS.gene74984:intron | 35.0% | |
| CTACCATACCACCTATTAAA+TGG | + | chr1.3:75926818-75926837 | None:intergenic | 35.0% | |
| CTGGAAGACAACTAAAGTAT+CGG | - | chr1.3:75927339-75927358 | MS.gene74984:CDS | 35.0% | |
| CTGTACAACCATTTAATAGG+TGG | - | chr1.3:75926807-75926826 | MS.gene74984:intron | 35.0% | |
| CTTCATCAATGTTTGATCTG+AGG | - | chr1.3:75927728-75927747 | MS.gene74984:CDS | 35.0% | |
| CTTGAATATGTCCATCTTCT+TGG | + | chr1.3:75926121-75926140 | None:intergenic | 35.0% | |
| GAAGATGTTTGTATGACTGA+AGG | - | chr1.3:75928557-75928576 | MS.gene74984:intron | 35.0% | |
| GCACTGTAACAAAAAGCAAA+AGG | + | chr1.3:75924533-75924552 | None:intergenic | 35.0% | |
| GTTCTCTCTGTCCAAAATAT+AGG | + | chr1.3:75926873-75926892 | None:intergenic | 35.0% | |
| TATGTCTCGGATAAGAATTG+AGG | - | chr1.3:75924575-75924594 | MS.gene74984:CDS | 35.0% | |
| TCAGTCATACAAACATCTTC+AGG | + | chr1.3:75928557-75928576 | None:intergenic | 35.0% | |
| TGATAAGAGCAAGGTATGAT+TGG | - | chr1.3:75925407-75925426 | MS.gene74984:intron | 35.0% | |
| TGATACATTTAGTGACCTGA+AGG | - | chr1.3:75928404-75928423 | MS.gene74984:intron | 35.0% | |
| TGTGTTCTCTGAGCATATTT+GGG | + | chr1.3:75928768-75928787 | None:intergenic | 35.0% | |
| TTAATAAAAGGAGGGAACAG+TGG | + | chr1.3:75926683-75926702 | None:intergenic | 35.0% | |
| TTAGGCCTAAAATACCTGTA+AGG | - | chr1.3:75926987-75927006 | MS.gene74984:intron | 35.0% | |
| TTAGTCAGATTGATGGAGAA+TGG | - | chr1.3:75927800-75927819 | MS.gene74984:intron | 35.0% | |
| TTATCCATAACTGCAGTTGA+CGG | + | chr1.3:75928634-75928653 | None:intergenic | 35.0% | |
| TTGATGAAGTCATCTCTCTT+GGG | - | chr1.3:75925247-75925266 | MS.gene74984:intron | 35.0% | |
| TTTCTAATGCAGTCAACTGT+TGG | - | chr1.3:75927659-75927678 | MS.gene74984:CDS | 35.0% | |
| TTTGATGAAGTCATCTCTCT+TGG | - | chr1.3:75925246-75925265 | MS.gene74984:intron | 35.0% | |
| ! | AGATGGACATATTCAAGTTC+AGG | - | chr1.3:75926124-75926143 | MS.gene74984:intron | 35.0% |
| ! | AGGGACTGAAACAATCATTT+TGG | - | chr1.3:75927076-75927095 | MS.gene74984:intron | 35.0% |
| ! | ATAGTTAGGCTAGGTTAGTT+AGG | + | chr1.3:75926710-75926729 | None:intergenic | 35.0% |
| ! | CAACCATGGTTTTTGTGTTT+TGG | - | chr1.3:75927870-75927889 | MS.gene74984:intron | 35.0% |
| ! | GAGAAATGGTAACGATTGTA+GGG | + | chr1.3:75926784-75926803 | None:intergenic | 35.0% |
| ! | GTTAACTTAGTATGACTTGC+TGG | - | chr1.3:75924848-75924867 | MS.gene74984:intron | 35.0% |
| ! | GTTTGTTTGTTACAAGAAGC+AGG | + | chr1.3:75924704-75924723 | None:intergenic | 35.0% |
| ! | TAGTTAGGCTAGGTTAGTTA+GGG | + | chr1.3:75926709-75926728 | None:intergenic | 35.0% |
| ! | TCCCATTTCAGTTCGTTTTA+CGG | - | chr1.3:75928377-75928396 | MS.gene74984:intron | 35.0% |
| ! | TGTCATATTGGTGCTTTCAT+GGG | - | chr1.3:75924911-75924930 | MS.gene74984:intron | 35.0% |
| ! | TTGTGCGTTCTCCTATATTT+TGG | - | chr1.3:75926859-75926878 | MS.gene74984:intron | 35.0% |
| !! | AATGATAGCTTTAACTGCCT+TGG | + | chr1.3:75926735-75926754 | None:intergenic | 35.0% |
| !! | CATCAATTGATGATTTTGGG+AGG | + | chr1.3:75928043-75928062 | None:intergenic | 35.0% |
| !! | GCTTAAGATGAGCTGTTTTA+TGG | - | chr1.3:75926510-75926529 | MS.gene74984:intron | 35.0% |
| !! | GTATTGCTTAACTTGTGCAA+CGG | + | chr1.3:75925289-75925308 | None:intergenic | 35.0% |
| !! | TCAATTGATGATTTTGGGAG+GGG | + | chr1.3:75928041-75928060 | None:intergenic | 35.0% |
| !! | TGCAATAAAATTGGCTTTGC+AGG | - | chr1.3:75928137-75928156 | MS.gene74984:CDS | 35.0% |
| !!! | ATTGGTCTTTTCGTCTTGTT+AGG | - | chr1.3:75924807-75924826 | MS.gene74984:intron | 35.0% |
| !!! | TCTTTTTTGCTTCTCTTTGC+AGG | - | chr1.3:75928707-75928726 | MS.gene74984:CDS | 35.0% |
| !!! | TTATCATGCCTTGTTTTTGC+AGG | - | chr1.3:75927365-75927384 | MS.gene74984:CDS | 35.0% |
| AAAAAGGGTCTTGAGAAGAG+GGG | + | chr1.3:75927305-75927324 | None:intergenic | 40.0% | |
| AACATCATACCACTTAAGGG+TGG | - | chr1.3:75928735-75928754 | MS.gene74984:CDS | 40.0% | |
| AAGAGCAAGGTATGATTGGA+GGG | - | chr1.3:75925411-75925430 | MS.gene74984:intron | 40.0% | |
| AATCTTCTCACAGACATGGT+GGG | - | chr1.3:75926550-75926569 | MS.gene74984:intron | 40.0% | |
| ACAAAAAGGGTCTTGAGAAG+AGG | + | chr1.3:75927307-75927326 | None:intergenic | 40.0% | |
| AGTCCAAGAAGAATAAGGCT+TGG | + | chr1.3:75926907-75926926 | None:intergenic | 40.0% | |
| AGTTTGGACCTGCAAAAACA+AGG | + | chr1.3:75927376-75927395 | None:intergenic | 40.0% | |
| CAAAAAGGGTCTTGAGAAGA+GGG | + | chr1.3:75927306-75927325 | None:intergenic | 40.0% | |
| CACCTAGTCCAAGAAGAATA+AGG | + | chr1.3:75926912-75926931 | None:intergenic | 40.0% | |
| CCAGAAGGAGGAAAAGTTAT+TGG | + | chr1.3:75926656-75926675 | None:intergenic | 40.0% | |
| CCATCAATCTGACTAACAGA+TGG | + | chr1.3:75927796-75927815 | None:intergenic | 40.0% | |
| CCATCTGTTAGTCAGATTGA+TGG | - | chr1.3:75927793-75927812 | MS.gene74984:CDS | 40.0% | |
| CGAAGAAAAGCTTTACAAGC+TGG | - | chr1.3:75925326-75925345 | MS.gene74984:intron | 40.0% | |
| CGCACAACTATATGACCAAA+CGG | + | chr1.3:75926846-75926865 | None:intergenic | 40.0% | |
| CTGTGTTCTCTGAGCATATT+TGG | + | chr1.3:75928769-75928788 | None:intergenic | 40.0% | |
| GAAGTTGTTCAGCCAAAACT+TGG | - | chr1.3:75925957-75925976 | MS.gene74984:intron | 40.0% | |
| GACAGGAAATTGAGAAGACA+TGG | + | chr1.3:75924895-75924914 | None:intergenic | 40.0% | |
| GACAGTTTGTGGATATGTCT+CGG | - | chr1.3:75924562-75924581 | MS.gene74984:CDS | 40.0% | |
| GAGCAACATACTGGAAGATT+TGG | - | chr1.3:75924725-75924744 | MS.gene74984:intron | 40.0% | |
| GAGCAAGGTCAATGAAACTA+AGG | - | chr1.3:75925356-75925375 | MS.gene74984:intron | 40.0% | |
| GATATGAGCATATCTAGCAG+TGG | - | chr1.3:75925601-75925620 | MS.gene74984:CDS | 40.0% | |
| GATGTTAACTCACTTGTCAG+CGG | + | chr1.3:75927579-75927598 | None:intergenic | 40.0% | |
| GCAGGTATGCTAAATTGGAA+TGG | - | chr1.3:75928218-75928237 | MS.gene74984:intron | 40.0% | |
| GCCGTAAAACGAACTGAAAT+GGG | + | chr1.3:75928381-75928400 | None:intergenic | 40.0% | |
| GGCACAAAAATTCTAGACTC+AGG | + | chr1.3:75924874-75924893 | None:intergenic | 40.0% | |
| GGGAAAGAATGCTGATGAAT+CGG | + | chr1.3:75928361-75928380 | None:intergenic | 40.0% | |
| GTCCAAACTGTGCCTATAAA+GGG | - | chr1.3:75925778-75925797 | MS.gene74984:CDS | 40.0% | |
| GTCTGGTATAAATGAGCTGA+TGG | - | chr1.3:75927899-75927918 | MS.gene74984:intron | 40.0% | |
| GTTAACATCGATCATTGACG+TGG | - | chr1.3:75927590-75927609 | MS.gene74984:intron | 40.0% | |
| GTTCAATCTTCTCACAGACA+TGG | - | chr1.3:75926546-75926565 | MS.gene74984:intron | 40.0% | |
| GTTTGATCTGAGGAATGTTG+TGG | - | chr1.3:75927738-75927757 | MS.gene74984:CDS | 40.0% | |
| TAACTGCCTTGGCTATAGTT+AGG | + | chr1.3:75926724-75926743 | None:intergenic | 40.0% | |
| TAAGAGCAAGGTATGATTGG+AGG | - | chr1.3:75925410-75925429 | MS.gene74984:intron | 40.0% | |
| TACCCTTTATAGGCACAGTT+TGG | + | chr1.3:75925783-75925802 | None:intergenic | 40.0% | |
| TCCTCAACAGTTAAAGTGAC+CGG | + | chr1.3:75926017-75926036 | None:intergenic | 40.0% | |
| TCTGAGGAATGTTGTGGTTT+CGG | - | chr1.3:75927744-75927763 | MS.gene74984:CDS | 40.0% | |
| TCTTATTCCCTTGACGAAGA+GGG | - | chr1.3:75925189-75925208 | MS.gene74984:intron | 40.0% | |
| TGCCGTAAAACGAACTGAAA+TGG | + | chr1.3:75928382-75928401 | None:intergenic | 40.0% | |
| TGGCTTGATTATCACCAGTT+TGG | + | chr1.3:75927392-75927411 | None:intergenic | 40.0% | |
| TGGTTGTACAGTAGGAGAAA+TGG | + | chr1.3:75926798-75926817 | None:intergenic | 40.0% | |
| TGTCCAAACTGTGCCTATAA+AGG | - | chr1.3:75925777-75925796 | MS.gene74984:CDS | 40.0% | |
| TGTCTGTGAGAAGATTGAAC+AGG | + | chr1.3:75926546-75926565 | None:intergenic | 40.0% | |
| TTCTTATTCCCTTGACGAAG+AGG | - | chr1.3:75925188-75925207 | MS.gene74984:intron | 40.0% | |
| TTGGAATCGTTGAAAGCAGA+AGG | - | chr1.3:75925921-75925940 | MS.gene74984:CDS | 40.0% | |
| TTTCTACCAAGCCTAAAGGT+TGG | - | chr1.3:75925680-75925699 | MS.gene74984:intron | 40.0% | |
| TTTGGTCCGTTAACGTCAAT+GGG | - | chr1.3:75925550-75925569 | MS.gene74984:CDS | 40.0% | |
| ! | ACCTTTAGGCTTGGTAGAAA+AGG | + | chr1.3:75925680-75925699 | None:intergenic | 40.0% |
| ! | CCAATAACTTTTCCTCCTTC+TGG | - | chr1.3:75926653-75926672 | MS.gene74984:intron | 40.0% |
| ! | CCACTTTAAAAGACCAACAC+CGG | + | chr1.3:75927526-75927545 | None:intergenic | 40.0% |
| ! | CCTGTAAGGTATTACACTGA+CGG | - | chr1.3:75927001-75927020 | MS.gene74984:intron | 40.0% |
| ! | CTGTCATATTGGTGCTTTCA+TGG | - | chr1.3:75924910-75924929 | MS.gene74984:intron | 40.0% |
| ! | GGAGAAATGGTAACGATTGT+AGG | + | chr1.3:75926785-75926804 | None:intergenic | 40.0% |
| ! | GTCATATTGGTGCTTTCATG+GGG | - | chr1.3:75924912-75924931 | MS.gene74984:CDS | 40.0% |
| ! | TATTCTTCTTGGACTAGGTG+AGG | - | chr1.3:75926912-75926931 | MS.gene74984:intron | 40.0% |
| ! | TCCTTTTCTACCAAGCCTAA+AGG | - | chr1.3:75925676-75925695 | MS.gene74984:intron | 40.0% |
| ! | TGACTCTAGGAATTCCATCT+TGG | - | chr1.3:75928162-75928181 | MS.gene74984:intron | 40.0% |
| !! | ACAGCATTTCCCAAGTTGAT+AGG | - | chr1.3:75924606-75924625 | MS.gene74984:intron | 40.0% |
| !! | AGCCTTATTCTTCTTGGACT+AGG | - | chr1.3:75926907-75926926 | MS.gene74984:intron | 40.0% |
| !! | ATTCTGTTAGGTACTGATCG+TGG | - | chr1.3:75926756-75926775 | MS.gene74984:intron | 40.0% |
| !! | CAACCAAGCCTTATTCTTCT+TGG | - | chr1.3:75926901-75926920 | MS.gene74984:intron | 40.0% |
| !! | CATGAAAGCACCAATATGAC+AGG | + | chr1.3:75924912-75924931 | None:intergenic | 40.0% |
| !! | CGTCTTGTTAGGAGCATTAT+TGG | - | chr1.3:75924818-75924837 | MS.gene74984:intron | 40.0% |
| !!! | TTGTGTTTTGGGTTGAAGTC+TGG | - | chr1.3:75927882-75927901 | MS.gene74984:intron | 40.0% |
| !!! | TTGTTTTTGCAGGTCCAAAC+TGG | - | chr1.3:75927375-75927394 | MS.gene74984:CDS | 40.0% |
| AAAGTGACCGGATCTGTAAG+TGG | + | chr1.3:75926005-75926024 | None:intergenic | 45.0% | |
| AAGGGTCTTGGTATGAAGCT+TGG | - | chr1.3:75925873-75925892 | MS.gene74984:CDS | 45.0% | |
| ACCTAGCCTAACTATAGCCA+AGG | - | chr1.3:75926715-75926734 | MS.gene74984:intron | 45.0% | |
| AGAGGTGATAAAGGAGGCTT+TGG | - | chr1.3:75925532-75925551 | MS.gene74984:CDS | 45.0% | |
| AGCAGGTACAGAGCTTCTAT+CGG | + | chr1.3:75924687-75924706 | None:intergenic | 45.0% | |
| AGCATATCTAGCAGTGGAAC+TGG | - | chr1.3:75925607-75925626 | MS.gene74984:CDS | 45.0% | |
| AGCTTCATACCAAGACCCTT+TGG | + | chr1.3:75925873-75925892 | None:intergenic | 45.0% | |
| AGGGTGTGTCTTGAAAGAGA+TGG | + | chr1.3:75927412-75927431 | None:intergenic | 45.0% | |
| AGTCTCGTTTCCAGAAGAAG+AGG | + | chr1.3:75927686-75927705 | None:intergenic | 45.0% | |
| ATCGTTGAAAGCAGAAGGTG+AGG | - | chr1.3:75925926-75925945 | MS.gene74984:CDS | 45.0% | |
| ATGGGTGTGGCTGTTCAATT+AGG | - | chr1.3:75926969-75926988 | MS.gene74984:intron | 45.0% | |
| CAATCTTCTCACAGACATGG+TGG | - | chr1.3:75926549-75926568 | MS.gene74984:intron | 45.0% | |
| CAATTGTTAGGGGACAACCA+TGG | - | chr1.3:75927856-75927875 | MS.gene74984:intron | 45.0% | |
| CCAGATCCCATTGACGTTAA+CGG | + | chr1.3:75925559-75925578 | None:intergenic | 45.0% | |
| CCGTCAGTGTAATACCTTAC+AGG | + | chr1.3:75927004-75927023 | None:intergenic | 45.0% | |
| CTAGGAATTCCATCTTGGAG+TGG | - | chr1.3:75928167-75928186 | MS.gene74984:intron | 45.0% | |
| CTGTGAGAAGATTGAACAGG+TGG | + | chr1.3:75926543-75926562 | None:intergenic | 45.0% | |
| CTTGAGAAGAGGGGAAGAAT+CGG | + | chr1.3:75927296-75927315 | None:intergenic | 45.0% | |
| CTTTGGTCCGTTAACGTCAA+TGG | - | chr1.3:75925549-75925568 | MS.gene74984:CDS | 45.0% | |
| GACTAACAGATGGTGCTTCT+CGG | + | chr1.3:75927786-75927805 | None:intergenic | 45.0% | |
| GGCGAAAACTATCCCCAAAT+AGG | + | chr1.3:75927105-75927124 | None:intergenic | 45.0% | |
| GTCACACTAAAACGAGATGG+CGG | - | chr1.3:75926047-75926066 | MS.gene74984:intron | 45.0% | |
| GTCAGATTGATGGAGAATGG+AGG | - | chr1.3:75927803-75927822 | MS.gene74984:intron | 45.0% | |
| GTCTCGTTTCCAGAAGAAGA+GGG | + | chr1.3:75927685-75927704 | None:intergenic | 45.0% | |
| GTTCTCTGAGCATATTTGGG+AGG | + | chr1.3:75928765-75928784 | None:intergenic | 45.0% | |
| TAGGTCTAAAGGATCCCAAC+AGG | - | chr1.3:75927469-75927488 | MS.gene74984:CDS | 45.0% | |
| TAGTGACCTGAAGGTTCGTA+TGG | - | chr1.3:75928413-75928432 | MS.gene74984:intron | 45.0% | |
| TATATTTGGCAGTGGGTCGA+TGG | - | chr1.3:75928317-75928336 | MS.gene74984:intron | 45.0% | |
| TGACAACCAACCTTTAGGCT+TGG | + | chr1.3:75925689-75925708 | None:intergenic | 45.0% | |
| TTCATACCAAGACCCTTTGG+CGG | + | chr1.3:75925870-75925889 | None:intergenic | 45.0% | |
| TTCCCAGTGCCTATCAACTT+GGG | + | chr1.3:75924618-75924637 | None:intergenic | 45.0% | |
| TTTCCCAGTGCCTATCAACT+TGG | + | chr1.3:75924619-75924638 | None:intergenic | 45.0% | |
| ! | CTTTAAAAGACCAACACCGG+CGG | + | chr1.3:75927523-75927542 | None:intergenic | 45.0% |
| ! | GCTAGTCTCTAGACAGTTTG+TGG | - | chr1.3:75924551-75924570 | MS.gene74984:CDS | 45.0% |
| ! | TCCGGTCACTTTAACTGTTG+AGG | - | chr1.3:75926013-75926032 | MS.gene74984:intron | 45.0% |
| ! | TGCAGTTGACGGATGGTATA+AGG | + | chr1.3:75928623-75928642 | None:intergenic | 45.0% |
| !! | AATGCTGATGAATCGGCTTG+TGG | + | chr1.3:75928354-75928373 | None:intergenic | 45.0% |
| !! | ATTGATGATTTTGGGAGGGG+AGG | + | chr1.3:75928038-75928057 | None:intergenic | 45.0% |
| !! | GTGCTTTCATGGGGTTTTGA+CGG | - | chr1.3:75924921-75924940 | MS.gene74984:CDS | 45.0% |
| !! | TCTAGCAGTGGAACTGGTTT+TGG | - | chr1.3:75925613-75925632 | MS.gene74984:CDS | 45.0% |
| !! | TTCCCAAGTTGATAGGCACT+GGG | - | chr1.3:75924613-75924632 | MS.gene74984:intron | 45.0% |
| !! | TTGATGATTTTGGGAGGGGA+GGG | + | chr1.3:75928037-75928056 | None:intergenic | 45.0% |
| !! | TTTCCCAAGTTGATAGGCAC+TGG | - | chr1.3:75924612-75924631 | MS.gene74984:intron | 45.0% |
| !!! | AGTGGAACTGGTTTTGGAAG+TGG | - | chr1.3:75925619-75925638 | MS.gene74984:CDS | 45.0% |
| !!! | CCGGTGTTGGTCTTTTAAAG+TGG | - | chr1.3:75927523-75927542 | MS.gene74984:intron | 45.0% |
| !!! | TTTGGAAGTGGCTCTGGTTT+TGG | - | chr1.3:75925631-75925650 | MS.gene74984:CDS | 45.0% |
| AACTGTTGGCCCTCTTCTTC+TGG | - | chr1.3:75927673-75927692 | MS.gene74984:CDS | 50.0% | |
| AAGGACAGTCCACTCCAAGA+TGG | + | chr1.3:75928179-75928198 | None:intergenic | 50.0% | |
| AGCCAAAACTTGGCCAGTCT+AGG | - | chr1.3:75925967-75925986 | MS.gene74984:intron | 50.0% | |
| AGTCACAGCACACAGAGCTT+GGG | + | chr1.3:75926169-75926188 | None:intergenic | 50.0% | |
| AGTCATCTCTCTTGGGCACA+AGG | - | chr1.3:75925254-75925273 | MS.gene74984:intron | 50.0% | |
| CAGTCGGTATGCAAGTTCCT+TGG | - | chr1.3:75926428-75926447 | MS.gene74984:intron | 50.0% | |
| CCATAACTGCAGTTGACGGA+TGG | + | chr1.3:75928630-75928649 | None:intergenic | 50.0% | |
| CCATCCGTCAACTGCAGTTA+TGG | - | chr1.3:75928627-75928646 | MS.gene74984:CDS | 50.0% | |
| CCGTTAACGTCAATGGGATC+TGG | - | chr1.3:75925556-75925575 | MS.gene74984:CDS | 50.0% | |
| GCAGATACCCTCTTCGTCAA+GGG | + | chr1.3:75925199-75925218 | None:intergenic | 50.0% | |
| GCCTTGGCTATAGTTAGGCT+AGG | + | chr1.3:75926719-75926738 | None:intergenic | 50.0% | |
| GGAGGATTACCACCCTTAAG+TGG | + | chr1.3:75928747-75928766 | None:intergenic | 50.0% | |
| GGCTTTGCAGGTATGACTCT+AGG | - | chr1.3:75928149-75928168 | MS.gene74984:intron | 50.0% | |
| GGTATGGTAGCACAACCGTT+TGG | - | chr1.3:75926828-75926847 | MS.gene74984:intron | 50.0% | |
| TGACCGGATCTGTAAGTGGT+GGG | + | chr1.3:75926001-75926020 | None:intergenic | 50.0% | |
| TGCAGATACCCTCTTCGTCA+AGG | + | chr1.3:75925200-75925219 | None:intergenic | 50.0% | |
| ! | TCTCACAGACATGGTGGGAT+TGG | - | chr1.3:75926555-75926574 | MS.gene74984:intron | 50.0% |
| !! | AACAGTGGATTGCCAGAAGG+AGG | + | chr1.3:75926668-75926687 | None:intergenic | 50.0% |
| !! | GACTGCTGGTTTGCATAACC+AGG | - | chr1.3:75926185-75926204 | MS.gene74984:intron | 50.0% |
| !! | GTCCTAGACTGGCCAAGTTT+TGG | + | chr1.3:75925972-75925991 | None:intergenic | 50.0% |
| !! | TGATGATTTTGGGAGGGGAG+GGG | + | chr1.3:75928036-75928055 | None:intergenic | 50.0% |
| !!! | ACTGGTTTTGGAAGTGGCTC+TGG | - | chr1.3:75925625-75925644 | MS.gene74984:CDS | 50.0% |
| AGATGCAGTTGGACGGCCTA+AGG | + | chr1.3:75925838-75925857 | None:intergenic | 55.0% | |
| CAGTCACAGCACACAGAGCT+TGG | + | chr1.3:75926170-75926189 | None:intergenic | 55.0% | |
| CAGTGGCAGATGCAGTTGGA+CGG | + | chr1.3:75925845-75925864 | None:intergenic | 55.0% | |
| GACCGGATCTGTAAGTGGTG+GGG | + | chr1.3:75926000-75926019 | None:intergenic | 55.0% | |
| GTGACCGGATCTGTAAGTGG+TGG | + | chr1.3:75926002-75926021 | None:intergenic | 55.0% | |
| TGCCCCACCACTTACAGATC+CGG | - | chr1.3:75925995-75926014 | MS.gene74984:intron | 55.0% | |
| ! | CAAGCTGGTTCAGCAGAGCA+AGG | - | chr1.3:75925341-75925360 | MS.gene74984:intron | 55.0% |
| !! | CAGCGGCACCATTGACTCAT+CGG | + | chr1.3:75927562-75927581 | None:intergenic | 55.0% |
| !! | CATCACTGGCTTGACCAGTG+GGG | + | chr1.3:75927500-75927519 | None:intergenic | 55.0% |
| !! | GCAGAGCACCGATGAGTCAA+TGG | - | chr1.3:75927551-75927570 | MS.gene74984:intron | 55.0% |
| !! | GCATCACTGGCTTGACCAGT+GGG | + | chr1.3:75927501-75927520 | None:intergenic | 55.0% |
| !! | GGGAACAGTGGATTGCCAGA+AGG | + | chr1.3:75926671-75926690 | None:intergenic | 55.0% |
| AAGACCCTTTGGCGGAGCAG+TGG | + | chr1.3:75925862-75925881 | None:intergenic | 60.0% | |
| ACCAGTGGGGAAAGGCCTGT+TGG | + | chr1.3:75927487-75927506 | None:intergenic | 60.0% | |
| ACTGCTCCGCCAAAGGGTCT+TGG | - | chr1.3:75925861-75925880 | MS.gene74984:CDS | 60.0% | |
| ATCTGCCACTGCTCCGCCAA+AGG | - | chr1.3:75925854-75925873 | MS.gene74984:CDS | 60.0% | |
| CCAGTGGGGAAAGGCCTGTT+GGG | + | chr1.3:75927486-75927505 | None:intergenic | 60.0% | |
| GATGGTGCTTCTCGGAGAGC+TGG | + | chr1.3:75927778-75927797 | None:intergenic | 60.0% | |
| GCTCTGTGTGCTGTGACTGC+TGG | - | chr1.3:75926171-75926190 | MS.gene74984:intron | 60.0% | |
| GCTTCTCGGAGAGCTGGAAG+AGG | + | chr1.3:75927772-75927791 | None:intergenic | 60.0% | |
| GGAGCAGTGGCAGATGCAGT+TGG | + | chr1.3:75925849-75925868 | None:intergenic | 60.0% | |
| TCTGCCACTGCTCCGCCAAA+GGG | - | chr1.3:75925855-75925874 | MS.gene74984:CDS | 60.0% | |
| ! | CTGGCTTGACCAGTGGGGAA+AGG | + | chr1.3:75927495-75927514 | None:intergenic | 60.0% |
| !! | ATTTTGGGAGGGGAGGGGAG+GGG | + | chr1.3:75928031-75928050 | None:intergenic | 60.0% |
| !! | GATTTTGGGAGGGGAGGGGA+GGG | + | chr1.3:75928032-75928051 | None:intergenic | 60.0% |
| !! | GGCATCACTGGCTTGACCAG+TGG | + | chr1.3:75927502-75927521 | None:intergenic | 60.0% |
| !! | TGATTTTGGGAGGGGAGGGG+AGG | + | chr1.3:75928033-75928052 | None:intergenic | 60.0% |
| ACCAACACCGGCGGCATCAC+TGG | + | chr1.3:75927514-75927533 | None:intergenic | 65.0% | |
| CCCAACAGGCCTTTCCCCAC+TGG | - | chr1.3:75927483-75927502 | MS.gene74984:intron | 65.0% | |
| GGTCAAGCCAGTGATGCCGC+CGG | - | chr1.3:75927504-75927523 | MS.gene74984:intron | 65.0% | |
| GTGGGGCAGCTGTCCTAGAC+TGG | + | chr1.3:75925983-75926002 | None:intergenic | 65.0% | |
| AGGGGAGGGGAGGGGCAATG+TGG | + | chr1.3:75928023-75928042 | None:intergenic | 70.0% | |
| GCCAGTGATGCCGCCGGTGT+TGG | - | chr1.3:75927510-75927529 | MS.gene74984:intron | 70.0% | |
| GGGGAGGGGAGGGGCAATGT+GGG | + | chr1.3:75928022-75928041 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75924519 | 75928818 | 75924519 | ID=MS.gene74984 |
| chr1.3 | mRNA | 75924519 | 75928818 | 75924519 | ID=MS.gene74984.t1;Parent=MS.gene74984 |
| chr1.3 | exon | 75928564 | 75928818 | 75928564 | ID=MS.gene74984.t1.exon1;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75928564 | 75928818 | 75928564 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75927918 | 75928160 | 75927918 | ID=MS.gene74984.t1.exon2;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75927918 | 75928160 | 75927918 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75927640 | 75927817 | 75927640 | ID=MS.gene74984.t1.exon3;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75927640 | 75927817 | 75927640 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75927192 | 75927496 | 75927192 | ID=MS.gene74984.t1.exon4;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75927192 | 75927496 | 75927192 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75925752 | 75925950 | 75925752 | ID=MS.gene74984.t1.exon5;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75925752 | 75925950 | 75925752 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75925513 | 75925666 | 75925513 | ID=MS.gene74984.t1.exon6;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75925513 | 75925666 | 75925513 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75925116 | 75925178 | 75925116 | ID=MS.gene74984.t1.exon7;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75925116 | 75925178 | 75925116 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75924912 | 75925008 | 75924912 | ID=MS.gene74984.t1.exon8;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75924912 | 75925008 | 75924912 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| chr1.3 | exon | 75924519 | 75924608 | 75924519 | ID=MS.gene74984.t1.exon9;Parent=MS.gene74984.t1 |
| chr1.3 | CDS | 75924519 | 75924608 | 75924519 | ID=cds.MS.gene74984.t1;Parent=MS.gene74984.t1 |
| Gene Sequence |
| Protein sequence |
