Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76243.t1 | XP_003597689.1 | 90.1 | 517 | 51 | 0 | 11 | 527 | 15 | 531 | 1.30E-252 | 882.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76243.t1 | Q93Y22 | 74.4 | 519 | 125 | 5 | 11 | 527 | 15 | 527 | 5.4e-199 | 695.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76243.t1 | G7II11 | 90.1 | 517 | 51 | 0 | 11 | 527 | 15 | 531 | 9.2e-253 | 882.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051914 | MS.gene76243 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene054593 | MS.gene76243 | 0.807739 | 4.36E-50 | -1.69E-46 |
| MS.gene05640 | MS.gene76243 | 0.814099 | 1.83E-51 | -1.69E-46 |
| MS.gene05652 | MS.gene76243 | 0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene056678 | MS.gene76243 | 0.841172 | 5.58E-58 | -1.69E-46 |
| MS.gene058128 | MS.gene76243 | 0.807676 | 4.50E-50 | -1.69E-46 |
| MS.gene06093 | MS.gene76243 | 0.812772 | 3.58E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014282 | MS.gene76243 | PPI |
| MS.gene034150 | MS.gene76243 | PPI |
| MS.gene76243 | MS.gene063166 | PPI |
| MS.gene76243 | MS.gene50077 | PPI |
| MS.gene76243 | MS.gene054585 | PPI |
| MS.gene053143 | MS.gene76243 | PPI |
| MS.gene76243 | MS.gene005784 | PPI |
| MS.gene76243 | MS.gene032230 | PPI |
| MS.gene76243 | MS.gene003672 | PPI |
| MS.gene76243 | MS.gene68093 | PPI |
| MS.gene76243 | MS.gene68223 | PPI |
| MS.gene003673 | MS.gene76243 | PPI |
| MS.gene76243 | MS.gene064893 | PPI |
| MS.gene76243 | MS.gene003223 | PPI |
| MS.gene76243 | MS.gene062888 | PPI |
| MS.gene76243 | MS.gene056700 | PPI |
| MS.gene003764 | MS.gene76243 | PPI |
| MS.gene76243 | MS.gene45686 | PPI |
| MS.gene76243 | MS.gene38302 | PPI |
| MS.gene76243 | MS.gene02789 | PPI |
| MS.gene76243 | MS.gene02023 | PPI |
| MS.gene21432 | MS.gene76243 | PPI |
| MS.gene76243 | MS.gene74608 | PPI |
| MS.gene76243 | MS.gene23325 | PPI |
| MS.gene76243 | MS.gene50735 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76243.t1 | MTR_2g101180 | 94.971 | 517 | 26 | 0 | 11 | 527 | 15 | 531 | 0.0 | 1002 |
| MS.gene76243.t1 | MTR_1g111910 | 92.424 | 396 | 28 | 2 | 132 | 527 | 1 | 394 | 0.0 | 719 |
| MS.gene76243.t1 | MTR_1g111900 | 87.260 | 416 | 12 | 3 | 112 | 527 | 24 | 398 | 0.0 | 702 |
| MS.gene76243.t1 | MTR_1g111910 | 92.814 | 334 | 23 | 1 | 132 | 465 | 1 | 333 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76243.t1 | AT5G05010 | 73.796 | 519 | 128 | 5 | 11 | 527 | 15 | 527 | 0.0 | 768 |
| MS.gene76243.t1 | AT5G05010 | 73.796 | 519 | 128 | 5 | 11 | 527 | 15 | 527 | 0.0 | 768 |
Find 132 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTCTTGGTTAAGAATT+TGG | 0.109257 | 1.1:+79004572 | None:intergenic |
| CTGTGTTCTCTGAGCATATT+TGG | 0.189831 | 1.1:+79001906 | None:intergenic |
| CTTGAATATGTCCATCTTCT+TGG | 0.211819 | 1.1:+79004560 | None:intergenic |
| TCTAGCAGTGGAACTGGTTT+TGG | 0.235664 | 1.1:-79005095 | MS.gene76243:CDS |
| TTTGGAAGTGGCTCTGGTTT+TGG | 0.245009 | 1.1:-79005077 | MS.gene76243:CDS |
| AACTGTTGGCCCTCTTCTTC+TGG | 0.278840 | 1.1:-79003002 | MS.gene76243:CDS |
| AATAACTCTTTATTCATGTT+AGG | 0.288485 | 1.1:+79003246 | None:intergenic |
| TCAAGGGAATAAGAATATTC+AGG | 0.290822 | 1.1:+79005528 | None:intergenic |
| GTCCTAGACTGGCCAAGTTT+TGG | 0.298368 | 1.1:+79004709 | None:intergenic |
| TACAAACATCATACCACTTA+AGG | 0.306927 | 1.1:-79001941 | MS.gene76243:CDS |
| TTTCAGAAAGAATACAAGTT+TGG | 0.329519 | 1.1:+79005942 | None:intergenic |
| GAGCAACATACTGGAAGATT+TGG | 0.339702 | 1.1:-79005983 | MS.gene76243:CDS |
| GAAAAGAATAGAGGTGATAA+AGG | 0.356831 | 1.1:-79005185 | MS.gene76243:CDS |
| CCAGATCCCATTGACGTTAA+CGG | 0.360280 | 1.1:+79005152 | None:intergenic |
| TGCCGTAAAACGAACTGAAA+TGG | 0.366753 | 1.1:+79002296 | None:intergenic |
| AGATGGACATATTCAAGTTC+AGG | 0.371232 | 1.1:-79004554 | MS.gene76243:intron |
| GCAGCATTTCCCAAGTTGAT+AGG | 0.371518 | 1.1:-79006102 | MS.gene76243:CDS |
| TTTGATGAAGTCATCTCTCT+TGG | 0.376116 | 1.1:-79005462 | MS.gene76243:CDS |
| CTTTGGTCCGTTAACGTCAA+TGG | 0.381100 | 1.1:-79005159 | MS.gene76243:CDS |
| TGGCTTGATTATCACCAGTT+TGG | 0.383291 | 1.1:+79003286 | None:intergenic |
| TTATGTCAGCATTGAATATG+AGG | 0.408842 | 1.1:-79002970 | MS.gene76243:CDS |
| ACCTTTAGGCTTGGTAGAAA+AGG | 0.412806 | 1.1:+79005031 | None:intergenic |
| ATAACTCTTTATTCATGTTA+GGG | 0.412906 | 1.1:+79003247 | None:intergenic |
| ACCAACACCGGCGGCATCAC+TGG | 0.413982 | 1.1:+79003164 | None:intergenic |
| TGTGTTCTCTGAGCATATTT+GGG | 0.417674 | 1.1:+79001907 | None:intergenic |
| TCTGAGGAATGTTGTGGTTT+CGG | 0.419247 | 1.1:-79002931 | MS.gene76243:CDS |
| GCCAGTGATGCCGCCGGTGT+TGG | 0.419520 | 1.1:-79003165 | MS.gene76243:CDS |
| ATCTGCCACTGCTCCGCCAA+AGG | 0.420373 | 1.1:-79004824 | MS.gene76243:CDS |
| TAAGAATTTGGAGAGACAAT+TGG | 0.421054 | 1.1:+79004584 | None:intergenic |
| AGAGGTGATAAAGGAGGCTT+TGG | 0.422652 | 1.1:-79005176 | MS.gene76243:CDS |
| GTGGGGCAGCTGTCCTAGAC+TGG | 0.429267 | 1.1:+79004698 | None:intergenic |
| CCATCTGTTAGTCAGATTGA+TGG | 0.431274 | 1.1:-79002882 | MS.gene76243:CDS |
| TTTCCCAGTGCCTATCAACT+TGG | 0.434831 | 1.1:+79006092 | None:intergenic |
| GCTAGTCTCTAGACAGTTTG+TGG | 0.435076 | 1.1:-79006157 | MS.gene76243:CDS |
| AAACAAACAGAGCAACATAC+TGG | 0.436197 | 1.1:-79005992 | MS.gene76243:CDS |
| GACTAACAGATGGTGCTTCT+CGG | 0.439604 | 1.1:+79002892 | None:intergenic |
| CCAGTGGGGAAAGGCCTGTT+GGG | 0.443467 | 1.1:+79003192 | None:intergenic |
| CCGTTAACGTCAATGGGATC+TGG | 0.444335 | 1.1:-79005152 | MS.gene76243:CDS |
| ACTGCTCCGCCAAAGGGTCT+TGG | 0.445125 | 1.1:-79004817 | MS.gene76243:CDS |
| GAAGTTGTTCAGCCAAAACT+TGG | 0.446093 | 1.1:-79004721 | MS.gene76243:CDS |
| AGCATATCTAGCAGTGGAAC+TGG | 0.447231 | 1.1:-79005101 | MS.gene76243:CDS |
| CGAATATATACTAGGTCTAA+AGG | 0.450556 | 1.1:-79003217 | MS.gene76243:CDS |
| TTTCCCAAGTTGATAGGCAC+TGG | 0.451489 | 1.1:-79006096 | MS.gene76243:CDS |
| GCCGTAAAACGAACTGAAAT+GGG | 0.454944 | 1.1:+79002297 | None:intergenic |
| AGCTTCATACCAAGACCCTT+TGG | 0.456960 | 1.1:+79004808 | None:intergenic |
| TCTGCCACTGCTCCGCCAAA+GGG | 0.459753 | 1.1:-79004823 | MS.gene76243:CDS |
| TTTGGTCCGTTAACGTCAAT+GGG | 0.461560 | 1.1:-79005158 | MS.gene76243:CDS |
| GGGAAAGAATGCTGATGAAT+CGG | 0.468736 | 1.1:+79002317 | None:intergenic |
| TTGATGAAGTCATCTCTCTT+GGG | 0.471175 | 1.1:-79005461 | MS.gene76243:CDS |
| GTTCAGATTGAAAAGAATAG+AGG | 0.475721 | 1.1:-79005194 | MS.gene76243:intron |
| GATGGTGCTTCTCGGAGAGC+TGG | 0.477636 | 1.1:+79002900 | None:intergenic |
| CAAATTCTTAACCAAGAAGA+TGG | 0.481738 | 1.1:-79004571 | MS.gene76243:CDS |
| GTTTGTTTGTTACAAGAAGC+AGG | 0.489618 | 1.1:+79006007 | None:intergenic |
| TCCTCAACAGTTAAAGTGAC+CGG | 0.492542 | 1.1:+79004664 | None:intergenic |
| TAGACCTAGTATATATTCGT+TGG | 0.492607 | 1.1:+79003221 | None:intergenic |
| TGACTCTAGGAATTCCATCT+TGG | 0.501538 | 1.1:-79002513 | MS.gene76243:CDS |
| TTTCTAATGTAGTCAACTGT+TGG | 0.501690 | 1.1:-79003016 | MS.gene76243:intron |
| TTAGTCAGATTGATGGAGAA+TGG | 0.504506 | 1.1:-79002875 | MS.gene76243:CDS |
| CAAGGGAATAAGAATATTCA+GGG | 0.504878 | 1.1:+79005529 | None:intergenic |
| ACAAACATCATACCACTTAA+GGG | 0.509720 | 1.1:-79001940 | MS.gene76243:CDS |
| CCCAACAGGCCTTTCCCCAC+TGG | 0.515516 | 1.1:-79003192 | MS.gene76243:CDS |
| TGCAGATACCCTCTTCGTCA+AGG | 0.516625 | 1.1:+79005511 | None:intergenic |
| TGCCCCACCACTTACAGATC+CGG | 0.517039 | 1.1:-79004683 | MS.gene76243:CDS |
| GGCATCACTGGCTTGACCAG+TGG | 0.517182 | 1.1:+79003176 | None:intergenic |
| GCAGAGCACCGATGAGTCAA+TGG | 0.518908 | 1.1:-79003124 | MS.gene76243:CDS |
| CGAAGAAAAGCTTTACAAGC+TGG | 0.519651 | 1.1:-79005382 | MS.gene76243:CDS |
| TCCGGTCACTTTAACTGTTG+AGG | 0.521260 | 1.1:-79004665 | MS.gene76243:CDS |
| GAGCAAGGTCAATGAAACTA+AGG | 0.523675 | 1.1:-79005352 | MS.gene76243:CDS |
| TTGGAATCGTTGAAAGCAGA+AGG | 0.527051 | 1.1:-79004757 | MS.gene76243:CDS |
| TAGGTCTAAAGGATCCCAAC+AGG | 0.527324 | 1.1:-79003206 | MS.gene76243:CDS |
| ACCAGTGGGGAAAGGCCTGT+TGG | 0.527981 | 1.1:+79003191 | None:intergenic |
| AGTCATCTCTCTTGGGCACA+AGG | 0.529363 | 1.1:-79005454 | MS.gene76243:CDS |
| TTCCCAGTGCCTATCAACTT+GGG | 0.533942 | 1.1:+79006093 | None:intergenic |
| CAGCGGCACCATTGACTCAT+CGG | 0.534057 | 1.1:+79003116 | None:intergenic |
| GGCTTTGCAGGTATGACTCT+AGG | 0.534133 | 1.1:-79002526 | MS.gene76243:intron |
| TATATTTGGCAGTGGGTCGA+TGG | 0.534191 | 1.1:-79002358 | MS.gene76243:intron |
| GCATCACTGGCTTGACCAGT+GGG | 0.537469 | 1.1:+79003177 | None:intergenic |
| GGAGGATTACCACCCTTAAG+TGG | 0.539563 | 1.1:+79001928 | None:intergenic |
| GACAGTTTGTGGATATGTCT+CGG | 0.541129 | 1.1:-79006146 | MS.gene76243:CDS |
| ATGTCTCGGATAAGAATTGA+GGG | 0.545450 | 1.1:-79006132 | MS.gene76243:CDS |
| TGACAACCAACCTTTAGGCT+TGG | 0.549250 | 1.1:+79005022 | None:intergenic |
| AAGGGTCTTGGTATGAAGCT+TGG | 0.552053 | 1.1:-79004805 | MS.gene76243:CDS |
| TGATTGATAATTCAAATCGC+AGG | 0.552733 | 1.1:-79002475 | MS.gene76243:intron |
| CTGGCTTGACCAGTGGGGAA+AGG | 0.553289 | 1.1:+79003183 | None:intergenic |
| TTCATACCAAGACCCTTTGG+CGG | 0.558674 | 1.1:+79004811 | None:intergenic |
| CTTCATCAATGTTTGATCTG+AGG | 0.560280 | 1.1:-79002947 | MS.gene76243:CDS |
| GTTCTCTGAGCATATTTGGG+AGG | 0.564000 | 1.1:+79001910 | None:intergenic |
| TGACCGGATCTGTAAGTGGT+GGG | 0.568365 | 1.1:+79004680 | None:intergenic |
| GGAGCAGTGGCAGATGCAGT+TGG | 0.569546 | 1.1:+79004832 | None:intergenic |
| GCAGATACCCTCTTCGTCAA+GGG | 0.569720 | 1.1:+79005512 | None:intergenic |
| AGCAGGTACAGAGCTTCTAT+CGG | 0.569923 | 1.1:+79006024 | None:intergenic |
| TCTTATTCCCTTGACGAAGA+GGG | 0.573537 | 1.1:-79005519 | MS.gene76243:CDS |
| TTTGCCAACGAATATATACT+AGG | 0.575476 | 1.1:-79003225 | MS.gene76243:CDS |
| AGTTAAGCAATACTGTGAGA+TGG | 0.575944 | 1.1:-79005412 | MS.gene76243:CDS |
| AAGAATAGAGGTGATAAAGG+AGG | 0.578057 | 1.1:-79005182 | MS.gene76243:CDS |
| AATGCTGATGAATCGGCTTG+TGG | 0.578310 | 1.1:+79002324 | None:intergenic |
| CAGTGGCAGATGCAGTTGGA+CGG | 0.580800 | 1.1:+79004836 | None:intergenic |
| TTCTTATTCCCTTGACGAAG+AGG | 0.581992 | 1.1:-79005520 | MS.gene76243:CDS |
| AAGGACAGTCCACTCCAAGA+TGG | 0.582320 | 1.1:+79002499 | None:intergenic |
| AAGACCCTTTGGCGGAGCAG+TGG | 0.583230 | 1.1:+79004819 | None:intergenic |
| TTCCCAAGTTGATAGGCACT+GGG | 0.584126 | 1.1:-79006095 | MS.gene76243:CDS |
| TATGTCTCGGATAAGAATTG+AGG | 0.588463 | 1.1:-79006133 | MS.gene76243:CDS |
| AGCCAAAACTTGGCCAGTCT+AGG | 0.590136 | 1.1:-79004711 | MS.gene76243:CDS |
| CCATCAATCTGACTAACAGA+TGG | 0.595071 | 1.1:+79002882 | None:intergenic |
| TGATACATTTAGTGACCTGA+AGG | 0.595305 | 1.1:-79002271 | MS.gene76243:intron |
| GCTTCTCGGAGAGCTGGAAG+AGG | 0.598962 | 1.1:+79002906 | None:intergenic |
| CAAGCTGGTTCAGCAGAGCA+AGG | 0.602199 | 1.1:-79005367 | MS.gene76243:CDS |
| GACCGGATCTGTAAGTGGTG+GGG | 0.605221 | 1.1:+79004681 | None:intergenic |
| GTTTGATCTGAGGAATGTTG+TGG | 0.605658 | 1.1:-79002937 | MS.gene76243:CDS |
| CCACTTTAAAAGACCAACAC+CGG | 0.605688 | 1.1:+79003152 | None:intergenic |
| AAAGTGACCGGATCTGTAAG+TGG | 0.607953 | 1.1:+79004676 | None:intergenic |
| GATTTGAATTATCAATCAGA+AGG | 0.611442 | 1.1:+79002480 | None:intergenic |
| GGTCAAGCCAGTGATGCCGC+CGG | 0.612112 | 1.1:-79003171 | MS.gene76243:CDS |
| AAGTGAGATTGATAAGAGCA+AGG | 0.620080 | 1.1:-79005310 | MS.gene76243:intron |
| GTCAGATTGATGGAGAATGG+AGG | 0.623551 | 1.1:-79002872 | MS.gene76243:intron |
| GTGACCGGATCTGTAAGTGG+TGG | 0.625034 | 1.1:+79004679 | None:intergenic |
| AGTCTCGTTTCCAGAAGAAG+AGG | 0.627045 | 1.1:+79002992 | None:intergenic |
| AATGTCACACTAAAACGAGA+TGG | 0.630100 | 1.1:-79004634 | MS.gene76243:CDS |
| ATCGTTGAAAGCAGAAGGTG+AGG | 0.632089 | 1.1:-79004752 | MS.gene76243:CDS |
| GTATTGCTTAACTTGTGCAA+CGG | 0.634970 | 1.1:+79005422 | None:intergenic |
| AAACTAAGGATCTTATGAAG+CGG | 0.636182 | 1.1:-79005338 | MS.gene76243:CDS |
| CTAGGAATTCCATCTTGGAG+TGG | 0.636941 | 1.1:-79002508 | MS.gene76243:CDS |
| AAAGGAATCAACATCAGTGG+TGG | 0.637113 | 1.1:+79005049 | None:intergenic |
| GTCTCGTTTCCAGAAGAAGA+GGG | 0.649029 | 1.1:+79002993 | None:intergenic |
| AGAAAAGGAATCAACATCAG+TGG | 0.656821 | 1.1:+79005046 | None:intergenic |
| GATATGAGCATATCTAGCAG+TGG | 0.667660 | 1.1:-79005107 | MS.gene76243:CDS |
| GTCACACTAAAACGAGATGG+CGG | 0.686876 | 1.1:-79004631 | MS.gene76243:CDS |
| AACATCATACCACTTAAGGG+TGG | 0.688096 | 1.1:-79001937 | MS.gene76243:CDS |
| CTTTAAAAGACCAACACCGG+CGG | 0.688739 | 1.1:+79003155 | None:intergenic |
| AGGGTGTGTCTTGAAAGAGA+TGG | 0.696577 | 1.1:+79003266 | None:intergenic |
| GATGTTAACTCACTTGTCAG+CGG | 0.717510 | 1.1:+79003099 | None:intergenic |
| CATCACTGGCTTGACCAGTG+GGG | 0.736650 | 1.1:+79003178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAAGATAATAAC+AGG | + | chr1.1:79005654-79005673 | None:intergenic | 10.0% |
| !! | TAAATGAAATATGTTAATAT+GGG | - | chr1.1:79004336-79004355 | MS.gene76243:intron | 10.0% |
| !! | TGACAAAAAAATTAATTTAA+GGG | + | chr1.1:79002462-79002481 | None:intergenic | 10.0% |
| !! | TTGACAAAAAAATTAATTTA+AGG | + | chr1.1:79002463-79002482 | None:intergenic | 10.0% |
| !!! | GTTATTATCTTTATTTTTAT+TGG | - | chr1.1:79005654-79005673 | MS.gene76243:intron | 10.0% |
| !! | GTAAATGAAATATGTTAATA+TGG | - | chr1.1:79004335-79004354 | MS.gene76243:intron | 15.0% |
| !! | TATATTGAAAATTGTATTTC+CGG | + | chr1.1:79004544-79004563 | None:intergenic | 15.0% |
| !! | TTGTCTGATTATAATATATT+TGG | - | chr1.1:79005693-79005712 | MS.gene76243:intron | 15.0% |
| !!! | GTTCATTACTTAATATTTTT+AGG | - | chr1.1:79002512-79002531 | MS.gene76243:CDS | 15.0% |
| !!! | TATTGAATTTTATAAGGTTT+AGG | - | chr1.1:79002380-79002399 | MS.gene76243:intron | 15.0% |
| !!! | TTGGTATATTGAATTTTATA+AGG | - | chr1.1:79002374-79002393 | MS.gene76243:intron | 15.0% |
| !!! | TTTTTTAGCTAGATTTTTTA+AGG | - | chr1.1:79003862-79003881 | MS.gene76243:intron | 15.0% |
| !!! | TTTTTTTTTTTCTTTCTTTC+TGG | - | chr1.1:79005831-79005850 | MS.gene76243:intron | 15.0% |
| !! | AATAACTCTTTATTCATGTT+AGG | + | chr1.1:79004822-79004841 | None:intergenic | 20.0% |
| !! | AATTATTCAAAATGAATTCC+TGG | + | chr1.1:79003593-79003612 | None:intergenic | 20.0% |
| !! | ACCAATCAATTGAAAATAAA+TGG | + | chr1.1:79002150-79002169 | None:intergenic | 20.0% |
| !! | ATAACTCTTTATTCATGTTA+GGG | + | chr1.1:79004821-79004840 | None:intergenic | 20.0% |
| !! | ATATTGAAAATTGTATTTCC+GGG | + | chr1.1:79004543-79004562 | None:intergenic | 20.0% |
| !! | ATTATAATATATTTGGCAGT+GGG | - | chr1.1:79005700-79005719 | MS.gene76243:intron | 20.0% |
| !! | ATTCAGAAACATGATAATAT+TGG | + | chr1.1:79003162-79003181 | None:intergenic | 20.0% |
| !! | CTAATTCAAACAAATTTAGT+TGG | + | chr1.1:79005362-79005381 | None:intergenic | 20.0% |
| !! | GATAATGTTTAAAAATCAGT+CGG | - | chr1.1:79003799-79003818 | MS.gene76243:intron | 20.0% |
| !! | GATGTACAAAAAAAAAAAAC+TGG | + | chr1.1:79004626-79004645 | None:intergenic | 20.0% |
| !! | TAAATGAAGAAATGAAACTT+AGG | + | chr1.1:79002319-79002338 | None:intergenic | 20.0% |
| !! | TTTGTTTGAATTAGAATGTT+CGG | - | chr1.1:79005368-79005387 | MS.gene76243:CDS | 20.0% |
| !!! | ATTATCATGTTTCTGAATAA+AGG | - | chr1.1:79003164-79003183 | MS.gene76243:CDS | 20.0% |
| !!! | ATTGATGAAATTGTTTTTAG+TGG | - | chr1.1:79002403-79002422 | MS.gene76243:intron | 20.0% |
| !!! | GAATGAATAAGAGAAATTTT+AGG | + | chr1.1:79004650-79004669 | None:intergenic | 20.0% |
| !!! | TCCATTTATTTTCAATTGAT+TGG | - | chr1.1:79002146-79002165 | MS.gene76243:intron | 20.0% |
| !!! | TTATCATGTTTCTGAATAAA+GGG | - | chr1.1:79003165-79003184 | MS.gene76243:CDS | 20.0% |
| !!! | TTCAGTACATTGAATTTTAT+AGG | - | chr1.1:79002348-79002367 | MS.gene76243:CDS | 20.0% |
| !!! | TTCATTTTTTTCTTCATCAT+GGG | + | chr1.1:79004511-79004530 | None:intergenic | 20.0% |
| !!! | TTGATGAAATTGTTTTTAGT+GGG | - | chr1.1:79002404-79002423 | MS.gene76243:intron | 20.0% |
| !!! | TTTTAATCACATCATCATTT+GGG | - | chr1.1:79003645-79003664 | MS.gene76243:intron | 20.0% |
| ! | AAGCTATCATTAATTCTGTT+AGG | - | chr1.1:79004129-79004148 | MS.gene76243:intron | 25.0% |
| ! | AATTAGAGAGTAAGAATGTA+AGG | + | chr1.1:79005506-79005525 | None:intergenic | 25.0% |
| ! | ACAAAAAGCAAAAGGTTTAT+TGG | + | chr1.1:79001882-79001901 | None:intergenic | 25.0% |
| ! | AGTGATATATGCATACAAAA+AGG | + | chr1.1:79004707-79004726 | None:intergenic | 25.0% |
| ! | ATTCAAACAAATTTAGTTGG+TGG | + | chr1.1:79005359-79005378 | None:intergenic | 25.0% |
| ! | CTCTAATTCTGCAATAAAAT+TGG | - | chr1.1:79005518-79005537 | MS.gene76243:CDS | 25.0% |
| ! | GAATAACAGTATTCAATTAC+TGG | - | chr1.1:79004010-79004029 | MS.gene76243:intron | 25.0% |
| ! | GATTATAATATATTTGGCAG+TGG | - | chr1.1:79005699-79005718 | MS.gene76243:intron | 25.0% |
| ! | GATTTGAATTATCAATCAGA+AGG | + | chr1.1:79005588-79005607 | None:intergenic | 25.0% |
| ! | GTGATATATGCATACAAAAA+GGG | + | chr1.1:79004706-79004725 | None:intergenic | 25.0% |
| ! | TAGTTAGGGAAGTTAATAAA+AGG | + | chr1.1:79004080-79004099 | None:intergenic | 25.0% |
| ! | TGCTTGAATATTGATGTAAT+GGG | - | chr1.1:79006062-79006081 | MS.gene76243:CDS | 25.0% |
| ! | TTCATTTCTTCATTTACATG+TGG | - | chr1.1:79002323-79002342 | MS.gene76243:CDS | 25.0% |
| ! | TTCTGGCATTCAAATTTATT+TGG | - | chr1.1:79005848-79005867 | MS.gene76243:intron | 25.0% |
| ! | TTGCTTGAATATTGATGTAA+TGG | - | chr1.1:79006061-79006080 | MS.gene76243:CDS | 25.0% |
| ! | TTTAATCACATCATCATTTG+GGG | - | chr1.1:79003646-79003665 | MS.gene76243:intron | 25.0% |
| ! | TTTCAGAAAGAATACAAGTT+TGG | + | chr1.1:79002126-79002145 | None:intergenic | 25.0% |
| !! | AGTTTGAAACAATGTCAAAA+TGG | - | chr1.1:79005890-79005909 | MS.gene76243:intron | 25.0% |
| !! | CATTGAATTTTATAGGTGTT+TGG | - | chr1.1:79002355-79002374 | MS.gene76243:intron | 25.0% |
| !! | CTTTTAATCACATCATCATT+TGG | - | chr1.1:79003644-79003663 | MS.gene76243:intron | 25.0% |
| !! | GCATTAAAACTGATTCAAAA+TGG | + | chr1.1:79002440-79002459 | None:intergenic | 25.0% |
| !! | TAATACCTTACAGGTATTTT+AGG | + | chr1.1:79004380-79004399 | None:intergenic | 25.0% |
| !! | TAATTGACTTATTTGAACCA+AGG | + | chr1.1:79003835-79003854 | None:intergenic | 25.0% |
| !! | TCAAAAGACAAATCAGTTTT+TGG | - | chr1.1:79003289-79003308 | MS.gene76243:CDS | 25.0% |
| !! | TTGATATGTGGTGTATTTTA+GGG | - | chr1.1:79004442-79004461 | MS.gene76243:intron | 25.0% |
| !! | TTTGATATGTGGTGTATTTT+AGG | - | chr1.1:79004441-79004460 | MS.gene76243:intron | 25.0% |
| !! | TTTTTGTATGCATATATCAC+TGG | - | chr1.1:79004706-79004725 | MS.gene76243:CDS | 25.0% |
| !!! | AAGTCATCAATTGATGATTT+TGG | + | chr1.1:79005437-79005456 | None:intergenic | 25.0% |
| !!! | AATCATTTTGGTTACCTATT+TGG | - | chr1.1:79004473-79004492 | MS.gene76243:intron | 25.0% |
| !!! | AGTCATCAATTGATGATTTT+GGG | + | chr1.1:79005436-79005455 | None:intergenic | 25.0% |
| !!! | ATCATTTTGGTTACCTATTT+GGG | - | chr1.1:79004474-79004493 | MS.gene76243:intron | 25.0% |
| !!! | ATTATGTTGCTTTTGATATG+TGG | - | chr1.1:79004430-79004449 | MS.gene76243:intron | 25.0% |
| !!! | CTTCATTTTTTTCTTCATCA+TGG | + | chr1.1:79004512-79004531 | None:intergenic | 25.0% |
| !!! | GTTAGTAATTTTGATGTTCA+AGG | - | chr1.1:79003458-79003477 | MS.gene76243:intron | 25.0% |
| AAACTAAGGATCTTATGAAG+CGG | - | chr1.1:79002727-79002746 | MS.gene76243:intron | 30.0% | |
| AAATTCCCATGATTTACATG+AGG | - | chr1.1:79003727-79003746 | MS.gene76243:intron | 30.0% | |
| ACAAACATCATACCACTTAA+GGG | - | chr1.1:79006125-79006144 | MS.gene76243:CDS | 30.0% | |
| ACTAAACCTCATGTAAATCA+TGG | + | chr1.1:79003736-79003755 | None:intergenic | 30.0% | |
| ATGAACTGAATATAAGAGCA+AGG | + | chr1.1:79002498-79002517 | None:intergenic | 30.0% | |
| ATTTATGACAACCAACCTTT+AGG | + | chr1.1:79003051-79003070 | None:intergenic | 30.0% | |
| CAAATTCTTAACCAAGAAGA+TGG | - | chr1.1:79003494-79003513 | MS.gene76243:intron | 30.0% | |
| CAAGGGAATAAGAATATTCA+GGG | + | chr1.1:79002539-79002558 | None:intergenic | 30.0% | |
| CATCTTCTTGGTTAAGAATT+TGG | + | chr1.1:79003496-79003515 | None:intergenic | 30.0% | |
| CGAATATATACTAGGTCTAA+AGG | - | chr1.1:79004848-79004867 | MS.gene76243:intron | 30.0% | |
| CTAAACCTCATGTAAATCAT+GGG | + | chr1.1:79003735-79003754 | None:intergenic | 30.0% | |
| CTACTGTACAACCATTTAAT+AGG | - | chr1.1:79004189-79004208 | MS.gene76243:intron | 30.0% | |
| CTATTAAATGGTTGTACAGT+AGG | + | chr1.1:79004191-79004210 | None:intergenic | 30.0% | |
| CTTTCTCTGAACAATTGTTA+GGG | - | chr1.1:79005235-79005254 | MS.gene76243:intron | 30.0% | |
| GAAAAGAATAGAGGTGATAA+AGG | - | chr1.1:79002880-79002899 | MS.gene76243:CDS | 30.0% | |
| GAAATATGTTAATATGGGTG+TGG | - | chr1.1:79004341-79004360 | MS.gene76243:intron | 30.0% | |
| GTTCAGATTGAAAAGAATAG+AGG | - | chr1.1:79002871-79002890 | MS.gene76243:intron | 30.0% | |
| TAAGAATTTGGAGAGACAAT+TGG | + | chr1.1:79003484-79003503 | None:intergenic | 30.0% | |
| TACAAACATCATACCACTTA+AGG | - | chr1.1:79006124-79006143 | MS.gene76243:CDS | 30.0% | |
| TAGACCTAGTATATATTCGT+TGG | + | chr1.1:79004847-79004866 | None:intergenic | 30.0% | |
| TAGGGAAGTTAATAAAAGGA+GGG | + | chr1.1:79004076-79004095 | None:intergenic | 30.0% | |
| TCAAGGGAATAAGAATATTC+AGG | + | chr1.1:79002540-79002559 | None:intergenic | 30.0% | |
| TTAAATGTAACGACTGTGAA+TGG | - | chr1.1:79003096-79003115 | MS.gene76243:intron | 30.0% | |
| TTAGGGAAGTTAATAAAAGG+AGG | + | chr1.1:79004077-79004096 | None:intergenic | 30.0% | |
| TTCATTTACTTCTCTCTTTC+AGG | + | chr1.1:79004324-79004343 | None:intergenic | 30.0% | |
| TTCTCAATTTCCTGTCATAT+TGG | - | chr1.1:79002256-79002275 | MS.gene76243:intron | 30.0% | |
| TTTCTAATGTAGTCAACTGT+TGG | - | chr1.1:79005049-79005068 | MS.gene76243:CDS | 30.0% | |
| TTTCTCTGAACAATTGTTAG+GGG | - | chr1.1:79005236-79005255 | MS.gene76243:intron | 30.0% | |
| TTTGCCAACGAATATATACT+AGG | - | chr1.1:79004840-79004859 | MS.gene76243:CDS | 30.0% | |
| ! | AACCATGGTTTTTGTGTTTT+GGG | - | chr1.1:79005261-79005280 | MS.gene76243:intron | 30.0% |
| ! | GTGAAACAAATTCTTTTTCC+TGG | - | chr1.1:79003680-79003699 | MS.gene76243:intron | 30.0% |
| ! | TGATTGATAATTCAAATCGC+AGG | - | chr1.1:79005590-79005609 | MS.gene76243:intron | 30.0% |
| ! | TTATGTCAGCATTGAATATG+AGG | - | chr1.1:79005095-79005114 | MS.gene76243:CDS | 30.0% |
| !! | AGCTTTTCACTTCTGAAAAT+AGG | + | chr1.1:79003968-79003987 | None:intergenic | 30.0% |
| !! | ATCAATTGATGATTTTGGGA+GGG | + | chr1.1:79005432-79005451 | None:intergenic | 30.0% |
| !! | CTTAAGATGAGCTGTTTTAT+GGG | - | chr1.1:79003898-79003917 | MS.gene76243:intron | 30.0% |
| !! | TTTAGTTTGCAGTGATATGT+TGG | - | chr1.1:79003750-79003769 | MS.gene76243:intron | 30.0% |
| !!! | ATGAAATTGTTTTTAGTGGG+AGG | - | chr1.1:79002407-79002426 | MS.gene76243:intron | 30.0% |
| !!! | TCATTTTGGTTACCTATTTG+GGG | - | chr1.1:79004475-79004494 | MS.gene76243:intron | 30.0% |
| AAAAATGAAGAGTTTGTGCC+CGG | - | chr1.1:79004522-79004541 | MS.gene76243:intron | 35.0% | |
| AAACAAACAGAGCAACATAC+TGG | - | chr1.1:79002073-79002092 | MS.gene76243:intron | 35.0% | |
| AAACGCAAAAATCAGCTCAA+AGG | + | chr1.1:79002586-79002605 | None:intergenic | 35.0% | |
| AAATCGCAGGTATGCTAAAT+TGG | - | chr1.1:79005603-79005622 | MS.gene76243:intron | 35.0% | |
| AACCCAAAACACAAAAACCA+TGG | + | chr1.1:79005266-79005285 | None:intergenic | 35.0% | |
| AAGAATAGAGGTGATAAAGG+AGG | - | chr1.1:79002883-79002902 | MS.gene76243:CDS | 35.0% | |
| AAGTGAGATTGATAAGAGCA+AGG | - | chr1.1:79002755-79002774 | MS.gene76243:intron | 35.0% | |
| AATGTCACACTAAAACGAGA+TGG | - | chr1.1:79003431-79003450 | MS.gene76243:intron | 35.0% | |
| ACTCTACTATTCTCTTCCTT+AGG | - | chr1.1:79003206-79003225 | MS.gene76243:CDS | 35.0% | |
| AGAAAAGGAATCAACATCAG+TGG | + | chr1.1:79003022-79003041 | None:intergenic | 35.0% | |
| AGTTAAGCAATACTGTGAGA+TGG | - | chr1.1:79002653-79002672 | MS.gene76243:intron | 35.0% | |
| ATGTCTCGGATAAGAATTGA+GGG | - | chr1.1:79001933-79001952 | MS.gene76243:CDS | 35.0% | |
| CAACCATTTAATAGGTGGTA+TGG | - | chr1.1:79004197-79004216 | MS.gene76243:intron | 35.0% | |
| CAATAGATAACATCTAAGCC+AGG | + | chr1.1:79003701-79003720 | None:intergenic | 35.0% | |
| CCTAACAATTGTTCAGAGAA+AGG | + | chr1.1:79005237-79005256 | None:intergenic | 35.0% | |
| CCTTTCTCTGAACAATTGTT+AGG | - | chr1.1:79005234-79005253 | MS.gene76243:intron | 35.0% | |
| CTACCATACCACCTATTAAA+TGG | + | chr1.1:79004203-79004222 | None:intergenic | 35.0% | |
| CTGGAAGACAACTAAAGTAT+CGG | - | chr1.1:79004725-79004744 | MS.gene76243:CDS | 35.0% | |
| CTGTACAACCATTTAATAGG+TGG | - | chr1.1:79004192-79004211 | MS.gene76243:intron | 35.0% | |
| CTTCATCAATGTTTGATCTG+AGG | - | chr1.1:79005118-79005137 | MS.gene76243:CDS | 35.0% | |
| CTTGAATATGTCCATCTTCT+TGG | + | chr1.1:79003508-79003527 | None:intergenic | 35.0% | |
| GAAGATGTTTGTATGACTGA+AGG | - | chr1.1:79005950-79005969 | MS.gene76243:intron | 35.0% | |
| GATAATATTGGCACAGAACA+AGG | + | chr1.1:79003150-79003169 | None:intergenic | 35.0% | |
| GCACTGTAACAAAAAGCAAA+AGG | + | chr1.1:79001890-79001909 | None:intergenic | 35.0% | |
| GTTCTCTCTGTCCAAAATAT+AGG | + | chr1.1:79004258-79004277 | None:intergenic | 35.0% | |
| TATGTCTCGGATAAGAATTG+AGG | - | chr1.1:79001932-79001951 | MS.gene76243:CDS | 35.0% | |
| TCAGTCATACAAACATCTTC+AGG | + | chr1.1:79005950-79005969 | None:intergenic | 35.0% | |
| TGATAAGAGCAAGGTATGAT+TGG | - | chr1.1:79002764-79002783 | MS.gene76243:intron | 35.0% | |
| TGATACATTTAGTGACCTGA+AGG | - | chr1.1:79005794-79005813 | MS.gene76243:intron | 35.0% | |
| TGTGTTCTCTGAGCATATTT+GGG | + | chr1.1:79006161-79006180 | None:intergenic | 35.0% | |
| TTAATAAAAGGAGGGAACAG+TGG | + | chr1.1:79004068-79004087 | None:intergenic | 35.0% | |
| TTAGGCCTAAAATACCTGTA+AGG | - | chr1.1:79004372-79004391 | MS.gene76243:intron | 35.0% | |
| TTAGTCAGATTGATGGAGAA+TGG | - | chr1.1:79005190-79005209 | MS.gene76243:CDS | 35.0% | |
| TTATCCATAACTGCAGTTGA+CGG | + | chr1.1:79006027-79006046 | None:intergenic | 35.0% | |
| TTGATGAAGTCATCTCTCTT+GGG | - | chr1.1:79002604-79002623 | MS.gene76243:intron | 35.0% | |
| TTTGATGAAGTCATCTCTCT+TGG | - | chr1.1:79002603-79002622 | MS.gene76243:intron | 35.0% | |
| ! | AGATGGACATATTCAAGTTC+AGG | - | chr1.1:79003511-79003530 | MS.gene76243:intron | 35.0% |
| ! | AGGGACTGAAACAATCATTT+TGG | - | chr1.1:79004461-79004480 | MS.gene76243:intron | 35.0% |
| ! | ATAGTTAGGCTAGGTTAGTT+AGG | + | chr1.1:79004095-79004114 | None:intergenic | 35.0% |
| ! | CAACCATGGTTTTTGTGTTT+TGG | - | chr1.1:79005260-79005279 | MS.gene76243:intron | 35.0% |
| ! | GAGAAATGGTAACGATTGTA+GGG | + | chr1.1:79004169-79004188 | None:intergenic | 35.0% |
| ! | GTTAACTTAGTATGACTTGC+TGG | - | chr1.1:79002205-79002224 | MS.gene76243:intron | 35.0% |
| ! | GTTTGTTTGTTACAAGAAGC+AGG | + | chr1.1:79002061-79002080 | None:intergenic | 35.0% |
| ! | TAGTTAGGCTAGGTTAGTTA+GGG | + | chr1.1:79004094-79004113 | None:intergenic | 35.0% |
| ! | TCCCATTTCAGTTCGTTTTA+CGG | - | chr1.1:79005767-79005786 | MS.gene76243:intron | 35.0% |
| ! | TGTCATATTGGTGCTTTCAT+GGG | - | chr1.1:79002268-79002287 | MS.gene76243:intron | 35.0% |
| ! | TTGTGCGTTCTCCTATATTT+TGG | - | chr1.1:79004244-79004263 | MS.gene76243:intron | 35.0% |
| !! | AATGATAGCTTTAACTGCCT+TGG | + | chr1.1:79004120-79004139 | None:intergenic | 35.0% |
| !! | CATCAATTGATGATTTTGGG+AGG | + | chr1.1:79005433-79005452 | None:intergenic | 35.0% |
| !! | GCTTAAGATGAGCTGTTTTA+TGG | - | chr1.1:79003897-79003916 | MS.gene76243:intron | 35.0% |
| !! | GTATTGCTTAACTTGTGCAA+CGG | + | chr1.1:79002646-79002665 | None:intergenic | 35.0% |
| !! | TCAATTGATGATTTTGGGAG+GGG | + | chr1.1:79005431-79005450 | None:intergenic | 35.0% |
| !! | TGCAATAAAATTGGCTTTGC+AGG | - | chr1.1:79005527-79005546 | MS.gene76243:CDS | 35.0% |
| !!! | ATATCATGCCTTGTTTTTGC+AGG | - | chr1.1:79004755-79004774 | MS.gene76243:CDS | 35.0% |
| !!! | ATTGGTCTTTTCGTCTTGTT+AGG | - | chr1.1:79002164-79002183 | MS.gene76243:intron | 35.0% |
| !!! | TCTTTTTTGCTTCTCTTTGC+AGG | - | chr1.1:79006100-79006119 | MS.gene76243:CDS | 35.0% |
| AAAAAGGGTCTTGAGAAGAG+GGG | + | chr1.1:79004691-79004710 | None:intergenic | 40.0% | |
| AAAGGAATCAACATCAGTGG+TGG | + | chr1.1:79003019-79003038 | None:intergenic | 40.0% | |
| AACAATCCATACGAACCTTC+AGG | + | chr1.1:79005812-79005831 | None:intergenic | 40.0% | |
| AACATCATACCACTTAAGGG+TGG | - | chr1.1:79006128-79006147 | MS.gene76243:CDS | 40.0% | |
| AAGAGCAAGGTATGATTGGA+GGG | - | chr1.1:79002768-79002787 | MS.gene76243:intron | 40.0% | |
| ACAAAAAGGGTCTTGAGAAG+AGG | + | chr1.1:79004693-79004712 | None:intergenic | 40.0% | |
| AGTCCAAGAAGAATAAGGCT+TGG | + | chr1.1:79004292-79004311 | None:intergenic | 40.0% | |
| AGTTTGGACCTGCAAAAACA+AGG | + | chr1.1:79004766-79004785 | None:intergenic | 40.0% | |
| CAAAAAGGGTCTTGAGAAGA+GGG | + | chr1.1:79004692-79004711 | None:intergenic | 40.0% | |
| CACCTAGTCCAAGAAGAATA+AGG | + | chr1.1:79004297-79004316 | None:intergenic | 40.0% | |
| CATGTCTGAGAAGATTGAAC+AGG | + | chr1.1:79003933-79003952 | None:intergenic | 40.0% | |
| CCAGAAGGAGGAAAAGTTAT+TGG | + | chr1.1:79004041-79004060 | None:intergenic | 40.0% | |
| CCATCAATCTGACTAACAGA+TGG | + | chr1.1:79005186-79005205 | None:intergenic | 40.0% | |
| CCATCTGTTAGTCAGATTGA+TGG | - | chr1.1:79005183-79005202 | MS.gene76243:CDS | 40.0% | |
| CGAAGAAAAGCTTTACAAGC+TGG | - | chr1.1:79002683-79002702 | MS.gene76243:intron | 40.0% | |
| CGCACAACTATATGACCAAA+CGG | + | chr1.1:79004231-79004250 | None:intergenic | 40.0% | |
| CTGTGTTCTCTGAGCATATT+TGG | + | chr1.1:79006162-79006181 | None:intergenic | 40.0% | |
| CTGTTCAATCTTCTCAGACA+TGG | - | chr1.1:79003931-79003950 | MS.gene76243:intron | 40.0% | |
| GAAGTTGTTCAGCCAAAACT+TGG | - | chr1.1:79003344-79003363 | MS.gene76243:intron | 40.0% | |
| GACAGGAAATTGAGAAGACA+TGG | + | chr1.1:79002252-79002271 | None:intergenic | 40.0% | |
| GACAGTTTGTGGATATGTCT+CGG | - | chr1.1:79001919-79001938 | MS.gene76243:CDS | 40.0% | |
| GAGCAACATACTGGAAGATT+TGG | - | chr1.1:79002082-79002101 | MS.gene76243:intron | 40.0% | |
| GAGCAAGGTCAATGAAACTA+AGG | - | chr1.1:79002713-79002732 | MS.gene76243:intron | 40.0% | |
| GATATGAGCATATCTAGCAG+TGG | - | chr1.1:79002958-79002977 | MS.gene76243:CDS | 40.0% | |
| GATGTTAACTCACTTGTCAG+CGG | + | chr1.1:79004969-79004988 | None:intergenic | 40.0% | |
| GCAGGTATGCTAAATTGGAA+TGG | - | chr1.1:79005608-79005627 | MS.gene76243:intron | 40.0% | |
| GCCGTAAAACGAACTGAAAT+GGG | + | chr1.1:79005771-79005790 | None:intergenic | 40.0% | |
| GGCACAAAAATTCTAGACTC+AGG | + | chr1.1:79002231-79002250 | None:intergenic | 40.0% | |
| GGGAAAGAATGCTGATGAAT+CGG | + | chr1.1:79005751-79005770 | None:intergenic | 40.0% | |
| GTCTGGTATAAATGAGCTGA+TGG | - | chr1.1:79005289-79005308 | MS.gene76243:intron | 40.0% | |
| GTTAACATCGATCATTGACG+TGG | - | chr1.1:79004980-79004999 | MS.gene76243:intron | 40.0% | |
| GTTTGATCTGAGGAATGTTG+TGG | - | chr1.1:79005128-79005147 | MS.gene76243:CDS | 40.0% | |
| TAACTGCCTTGGCTATAGTT+AGG | + | chr1.1:79004109-79004128 | None:intergenic | 40.0% | |
| TAAGAGCAAGGTATGATTGG+AGG | - | chr1.1:79002767-79002786 | MS.gene76243:intron | 40.0% | |
| TCAATCTTCTCAGACATGGT+GGG | - | chr1.1:79003935-79003954 | MS.gene76243:intron | 40.0% | |
| TCCTCAACAGTTAAAGTGAC+CGG | + | chr1.1:79003404-79003423 | None:intergenic | 40.0% | |
| TCTGAGGAATGTTGTGGTTT+CGG | - | chr1.1:79005134-79005153 | MS.gene76243:CDS | 40.0% | |
| TCTTATTCCCTTGACGAAGA+GGG | - | chr1.1:79002546-79002565 | MS.gene76243:intron | 40.0% | |
| TGCCGTAAAACGAACTGAAA+TGG | + | chr1.1:79005772-79005791 | None:intergenic | 40.0% | |
| TGGCTTGATTATCACCAGTT+TGG | + | chr1.1:79004782-79004801 | None:intergenic | 40.0% | |
| TGGTTGTACAGTAGGAGAAA+TGG | + | chr1.1:79004183-79004202 | None:intergenic | 40.0% | |
| TTCAATCTTCTCAGACATGG+TGG | - | chr1.1:79003934-79003953 | MS.gene76243:intron | 40.0% | |
| TTCTTATTCCCTTGACGAAG+AGG | - | chr1.1:79002545-79002564 | MS.gene76243:intron | 40.0% | |
| TTGGAATCGTTGAAAGCAGA+AGG | - | chr1.1:79003308-79003327 | MS.gene76243:intron | 40.0% | |
| TTTCTACCAAGCCTAAAGGT+TGG | - | chr1.1:79003037-79003056 | MS.gene76243:intron | 40.0% | |
| TTTGGTCCGTTAACGTCAAT+GGG | - | chr1.1:79002907-79002926 | MS.gene76243:CDS | 40.0% | |
| ! | ACCTTTAGGCTTGGTAGAAA+AGG | + | chr1.1:79003037-79003056 | None:intergenic | 40.0% |
| ! | CCAATAACTTTTCCTCCTTC+TGG | - | chr1.1:79004038-79004057 | MS.gene76243:intron | 40.0% |
| ! | CCACTTTAAAAGACCAACAC+CGG | + | chr1.1:79004916-79004935 | None:intergenic | 40.0% |
| ! | CCTGTAAGGTATTACACTGA+CGG | - | chr1.1:79004386-79004405 | MS.gene76243:intron | 40.0% |
| ! | CTGTCATATTGGTGCTTTCA+TGG | - | chr1.1:79002267-79002286 | MS.gene76243:intron | 40.0% |
| ! | GGAGAAATGGTAACGATTGT+AGG | + | chr1.1:79004170-79004189 | None:intergenic | 40.0% |
| ! | GTCATATTGGTGCTTTCATG+GGG | - | chr1.1:79002269-79002288 | MS.gene76243:intron | 40.0% |
| ! | TATTCTTCTTGGACTAGGTG+AGG | - | chr1.1:79004297-79004316 | MS.gene76243:intron | 40.0% |
| ! | TCCTTTTCTACCAAGCCTAA+AGG | - | chr1.1:79003033-79003052 | MS.gene76243:intron | 40.0% |
| ! | TGACTCTAGGAATTCCATCT+TGG | - | chr1.1:79005552-79005571 | MS.gene76243:intron | 40.0% |
| !! | AGCCTTATTCTTCTTGGACT+AGG | - | chr1.1:79004292-79004311 | MS.gene76243:intron | 40.0% |
| !! | ATTCTGTTAGGTACTGATCG+TGG | - | chr1.1:79004141-79004160 | MS.gene76243:intron | 40.0% |
| !! | CAACCAAGCCTTATTCTTCT+TGG | - | chr1.1:79004286-79004305 | MS.gene76243:intron | 40.0% |
| !! | CATGAAAGCACCAATATGAC+AGG | + | chr1.1:79002269-79002288 | None:intergenic | 40.0% |
| !! | CGTCTTGTTAGGAGCATTAT+TGG | - | chr1.1:79002175-79002194 | MS.gene76243:intron | 40.0% |
| !!! | TTGTGTTTTGGGTTGAAGTC+TGG | - | chr1.1:79005272-79005291 | MS.gene76243:intron | 40.0% |
| !!! | TTGTTTTTGCAGGTCCAAAC+TGG | - | chr1.1:79004765-79004784 | MS.gene76243:CDS | 40.0% |
| AAAGTGACCGGATCTGTAAG+TGG | + | chr1.1:79003392-79003411 | None:intergenic | 45.0% | |
| AAGGGTCTTGGTATGAAGCT+TGG | - | chr1.1:79003260-79003279 | MS.gene76243:CDS | 45.0% | |
| ACCTAGCCTAACTATAGCCA+AGG | - | chr1.1:79004100-79004119 | MS.gene76243:intron | 45.0% | |
| AGAGGTGATAAAGGAGGCTT+TGG | - | chr1.1:79002889-79002908 | MS.gene76243:CDS | 45.0% | |
| AGCAGGTACAGAGCTTCTAT+CGG | + | chr1.1:79002044-79002063 | None:intergenic | 45.0% | |
| AGCATATCTAGCAGTGGAAC+TGG | - | chr1.1:79002964-79002983 | MS.gene76243:CDS | 45.0% | |
| AGCTTCATACCAAGACCCTT+TGG | + | chr1.1:79003260-79003279 | None:intergenic | 45.0% | |
| AGGGTGTGTCTTGAAAGAGA+TGG | + | chr1.1:79004802-79004821 | None:intergenic | 45.0% | |
| AGTCTCGTTTCCAGAAGAAG+AGG | + | chr1.1:79005076-79005095 | None:intergenic | 45.0% | |
| ATCGTTGAAAGCAGAAGGTG+AGG | - | chr1.1:79003313-79003332 | MS.gene76243:intron | 45.0% | |
| ATGGGTGTGGCTGTTCAATT+AGG | - | chr1.1:79004354-79004373 | MS.gene76243:intron | 45.0% | |
| CAATTGTTAGGGGACAACCA+TGG | - | chr1.1:79005246-79005265 | MS.gene76243:intron | 45.0% | |
| CCAGATCCCATTGACGTTAA+CGG | + | chr1.1:79002916-79002935 | None:intergenic | 45.0% | |
| CCGTCAGTGTAATACCTTAC+AGG | + | chr1.1:79004389-79004408 | None:intergenic | 45.0% | |
| CTAGGAATTCCATCTTGGAG+TGG | - | chr1.1:79005557-79005576 | MS.gene76243:intron | 45.0% | |
| CTTGAGAAGAGGGGAAGAAT+CGG | + | chr1.1:79004682-79004701 | None:intergenic | 45.0% | |
| CTTTGGTCCGTTAACGTCAA+TGG | - | chr1.1:79002906-79002925 | MS.gene76243:CDS | 45.0% | |
| GACTAACAGATGGTGCTTCT+CGG | + | chr1.1:79005176-79005195 | None:intergenic | 45.0% | |
| GGCGAAAACTATCCCCAAAT+AGG | + | chr1.1:79004490-79004509 | None:intergenic | 45.0% | |
| GTCACACTAAAACGAGATGG+CGG | - | chr1.1:79003434-79003453 | MS.gene76243:intron | 45.0% | |
| GTCAGATTGATGGAGAATGG+AGG | - | chr1.1:79005193-79005212 | MS.gene76243:intron | 45.0% | |
| GTCTCGTTTCCAGAAGAAGA+GGG | + | chr1.1:79005075-79005094 | None:intergenic | 45.0% | |
| GTCTGAGAAGATTGAACAGG+TGG | + | chr1.1:79003930-79003949 | None:intergenic | 45.0% | |
| GTTCTCTGAGCATATTTGGG+AGG | + | chr1.1:79006158-79006177 | None:intergenic | 45.0% | |
| TAGGTCTAAAGGATCCCAAC+AGG | - | chr1.1:79004859-79004878 | MS.gene76243:intron | 45.0% | |
| TAGTGACCTGAAGGTTCGTA+TGG | - | chr1.1:79005803-79005822 | MS.gene76243:intron | 45.0% | |
| TATATTTGGCAGTGGGTCGA+TGG | - | chr1.1:79005707-79005726 | MS.gene76243:intron | 45.0% | |
| TGACAACCAACCTTTAGGCT+TGG | + | chr1.1:79003046-79003065 | None:intergenic | 45.0% | |
| TTCATACCAAGACCCTTTGG+CGG | + | chr1.1:79003257-79003276 | None:intergenic | 45.0% | |
| TTCCCAGTGCCTATCAACTT+GGG | + | chr1.1:79001975-79001994 | None:intergenic | 45.0% | |
| TTTCCCAGTGCCTATCAACT+TGG | + | chr1.1:79001976-79001995 | None:intergenic | 45.0% | |
| ! | CTTTAAAAGACCAACACCGG+CGG | + | chr1.1:79004913-79004932 | None:intergenic | 45.0% |
| ! | GCTAGTCTCTAGACAGTTTG+TGG | - | chr1.1:79001908-79001927 | MS.gene76243:CDS | 45.0% |
| ! | TCCGGTCACTTTAACTGTTG+AGG | - | chr1.1:79003400-79003419 | MS.gene76243:intron | 45.0% |
| ! | TGCAGTTGACGGATGGTATA+AGG | + | chr1.1:79006016-79006035 | None:intergenic | 45.0% |
| !! | AATGCTGATGAATCGGCTTG+TGG | + | chr1.1:79005744-79005763 | None:intergenic | 45.0% |
| !! | ATTGATGATTTTGGGAGGGG+AGG | + | chr1.1:79005428-79005447 | None:intergenic | 45.0% |
| !! | GCAGCATTTCCCAAGTTGAT+AGG | - | chr1.1:79001963-79001982 | MS.gene76243:intron | 45.0% |
| !! | GTGCTTTCATGGGGTTTTGA+CGG | - | chr1.1:79002278-79002297 | MS.gene76243:CDS | 45.0% |
| !! | TCTAGCAGTGGAACTGGTTT+TGG | - | chr1.1:79002970-79002989 | MS.gene76243:CDS | 45.0% |
| !! | TTCCCAAGTTGATAGGCACT+GGG | - | chr1.1:79001970-79001989 | MS.gene76243:intron | 45.0% |
| !! | TTGATGATTTTGGGAGGGGA+GGG | + | chr1.1:79005427-79005446 | None:intergenic | 45.0% |
| !! | TTTCCCAAGTTGATAGGCAC+TGG | - | chr1.1:79001969-79001988 | MS.gene76243:intron | 45.0% |
| !!! | AGTGGAACTGGTTTTGGAAG+TGG | - | chr1.1:79002976-79002995 | MS.gene76243:CDS | 45.0% |
| !!! | CCGGTGTTGGTCTTTTAAAG+TGG | - | chr1.1:79004913-79004932 | MS.gene76243:intron | 45.0% |
| !!! | TTTGGAAGTGGCTCTGGTTT+TGG | - | chr1.1:79002988-79003007 | MS.gene76243:CDS | 45.0% |
| AACTGTTGGCCCTCTTCTTC+TGG | - | chr1.1:79005063-79005082 | MS.gene76243:CDS | 50.0% | |
| AAGGACAGTCCACTCCAAGA+TGG | + | chr1.1:79005569-79005588 | None:intergenic | 50.0% | |
| AGCCAAAACTTGGCCAGTCT+AGG | - | chr1.1:79003354-79003373 | MS.gene76243:intron | 50.0% | |
| AGTCACAGCACACAGAGCTT+GGG | + | chr1.1:79003556-79003575 | None:intergenic | 50.0% | |
| AGTCATCTCTCTTGGGCACA+AGG | - | chr1.1:79002611-79002630 | MS.gene76243:intron | 50.0% | |
| CAGTCGGTATGCAAGTTCCT+TGG | - | chr1.1:79003815-79003834 | MS.gene76243:intron | 50.0% | |
| CCATAACTGCAGTTGACGGA+TGG | + | chr1.1:79006023-79006042 | None:intergenic | 50.0% | |
| CCATCCGTCAACTGCAGTTA+TGG | - | chr1.1:79006020-79006039 | MS.gene76243:CDS | 50.0% | |
| CCGTTAACGTCAATGGGATC+TGG | - | chr1.1:79002913-79002932 | MS.gene76243:CDS | 50.0% | |
| GCACAGAACAAGGCACAGTT+TGG | + | chr1.1:79003140-79003159 | None:intergenic | 50.0% | |
| GCAGATACCCTCTTCGTCAA+GGG | + | chr1.1:79002556-79002575 | None:intergenic | 50.0% | |
| GCCTTGGCTATAGTTAGGCT+AGG | + | chr1.1:79004104-79004123 | None:intergenic | 50.0% | |
| GGAGGATTACCACCCTTAAG+TGG | + | chr1.1:79006140-79006159 | None:intergenic | 50.0% | |
| GGCTTTGCAGGTATGACTCT+AGG | - | chr1.1:79005539-79005558 | MS.gene76243:intron | 50.0% | |
| GGTATGGTAGCACAACCGTT+TGG | - | chr1.1:79004213-79004232 | MS.gene76243:intron | 50.0% | |
| TGACCGGATCTGTAAGTGGT+GGG | + | chr1.1:79003388-79003407 | None:intergenic | 50.0% | |
| TGCAGATACCCTCTTCGTCA+AGG | + | chr1.1:79002557-79002576 | None:intergenic | 50.0% | |
| ! | CTTCTCAGACATGGTGGGAT+TGG | - | chr1.1:79003940-79003959 | MS.gene76243:intron | 50.0% |
| !! | AACAGTGGATTGCCAGAAGG+AGG | + | chr1.1:79004053-79004072 | None:intergenic | 50.0% |
| !! | GACTGCTGGTTTGCATAACC+AGG | - | chr1.1:79003572-79003591 | MS.gene76243:intron | 50.0% |
| !! | GTCCTAGACTGGCCAAGTTT+TGG | + | chr1.1:79003359-79003378 | None:intergenic | 50.0% |
| !! | TGATGATTTTGGGAGGGGAG+GGG | + | chr1.1:79005426-79005445 | None:intergenic | 50.0% |
| !!! | ACTGGTTTTGGAAGTGGCTC+TGG | - | chr1.1:79002982-79003001 | MS.gene76243:CDS | 50.0% |
| AGATGCAGTTGGACGGCCTA+AGG | + | chr1.1:79003225-79003244 | None:intergenic | 55.0% | |
| CAGTCACAGCACACAGAGCT+TGG | + | chr1.1:79003557-79003576 | None:intergenic | 55.0% | |
| CAGTGGCAGATGCAGTTGGA+CGG | + | chr1.1:79003232-79003251 | None:intergenic | 55.0% | |
| GACCGGATCTGTAAGTGGTG+GGG | + | chr1.1:79003387-79003406 | None:intergenic | 55.0% | |
| GTGACCGGATCTGTAAGTGG+TGG | + | chr1.1:79003389-79003408 | None:intergenic | 55.0% | |
| TGCCCCACCACTTACAGATC+CGG | - | chr1.1:79003382-79003401 | MS.gene76243:intron | 55.0% | |
| ! | CAAGCTGGTTCAGCAGAGCA+AGG | - | chr1.1:79002698-79002717 | MS.gene76243:intron | 55.0% |
| !! | CAGCGGCACCATTGACTCAT+CGG | + | chr1.1:79004952-79004971 | None:intergenic | 55.0% |
| !! | CATCACTGGCTTGACCAGTG+GGG | + | chr1.1:79004890-79004909 | None:intergenic | 55.0% |
| !! | GCAGAGCACCGATGAGTCAA+TGG | - | chr1.1:79004941-79004960 | MS.gene76243:intron | 55.0% |
| !! | GCATCACTGGCTTGACCAGT+GGG | + | chr1.1:79004891-79004910 | None:intergenic | 55.0% |
| !! | GGGAACAGTGGATTGCCAGA+AGG | + | chr1.1:79004056-79004075 | None:intergenic | 55.0% |
| AAGACCCTTTGGCGGAGCAG+TGG | + | chr1.1:79003249-79003268 | None:intergenic | 60.0% | |
| ACCAGTGGGGAAAGGCCTGT+TGG | + | chr1.1:79004877-79004896 | None:intergenic | 60.0% | |
| ACTGCTCCGCCAAAGGGTCT+TGG | - | chr1.1:79003248-79003267 | MS.gene76243:CDS | 60.0% | |
| ATCTGCCACTGCTCCGCCAA+AGG | - | chr1.1:79003241-79003260 | MS.gene76243:CDS | 60.0% | |
| CCAGTGGGGAAAGGCCTGTT+GGG | + | chr1.1:79004876-79004895 | None:intergenic | 60.0% | |
| GATGGTGCTTCTCGGAGAGC+TGG | + | chr1.1:79005168-79005187 | None:intergenic | 60.0% | |
| GCTCTGTGTGCTGTGACTGC+TGG | - | chr1.1:79003558-79003577 | MS.gene76243:intron | 60.0% | |
| GCTTCTCGGAGAGCTGGAAG+AGG | + | chr1.1:79005162-79005181 | None:intergenic | 60.0% | |
| GGAGCAGTGGCAGATGCAGT+TGG | + | chr1.1:79003236-79003255 | None:intergenic | 60.0% | |
| TCTGCCACTGCTCCGCCAAA+GGG | - | chr1.1:79003242-79003261 | MS.gene76243:CDS | 60.0% | |
| ! | CTGGCTTGACCAGTGGGGAA+AGG | + | chr1.1:79004885-79004904 | None:intergenic | 60.0% |
| !! | GGCATCACTGGCTTGACCAG+TGG | + | chr1.1:79004892-79004911 | None:intergenic | 60.0% |
| !! | TGATTTTGGGAGGGGAGGGG+AGG | + | chr1.1:79005423-79005442 | None:intergenic | 60.0% |
| ACCAACACCGGCGGCATCAC+TGG | + | chr1.1:79004904-79004923 | None:intergenic | 65.0% | |
| AGGGGAGGGGAGGAGCAATG+TGG | + | chr1.1:79005413-79005432 | None:intergenic | 65.0% | |
| CCCAACAGGCCTTTCCCCAC+TGG | - | chr1.1:79004873-79004892 | MS.gene76243:intron | 65.0% | |
| GGGGAGGGGAGGAGCAATGT+GGG | + | chr1.1:79005412-79005431 | None:intergenic | 65.0% | |
| GGTCAAGCCAGTGATGCCGC+CGG | - | chr1.1:79004894-79004913 | MS.gene76243:intron | 65.0% | |
| GTGGGGCAGCTGTCCTAGAC+TGG | + | chr1.1:79003370-79003389 | None:intergenic | 65.0% | |
| GCCAGTGATGCCGCCGGTGT+TGG | - | chr1.1:79004900-79004919 | MS.gene76243:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79001876 | 79006211 | 79001876 | ID=MS.gene76243 |
| chr1.1 | mRNA | 79001876 | 79006211 | 79001876 | ID=MS.gene76243.t1;Parent=MS.gene76243 |
| chr1.1 | exon | 79005957 | 79006211 | 79005957 | ID=MS.gene76243.t1.exon1;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79005957 | 79006211 | 79005957 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79005311 | 79005553 | 79005311 | ID=MS.gene76243.t1.exon2;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79005311 | 79005553 | 79005311 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79005033 | 79005210 | 79005033 | ID=MS.gene76243.t1.exon3;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79005033 | 79005210 | 79005033 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79004555 | 79004859 | 79004555 | ID=MS.gene76243.t1.exon4;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79004555 | 79004859 | 79004555 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79003112 | 79003310 | 79003112 | ID=MS.gene76243.t1.exon5;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79003112 | 79003310 | 79003112 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79002873 | 79003026 | 79002873 | ID=MS.gene76243.t1.exon6;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79002873 | 79003026 | 79002873 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79002476 | 79002538 | 79002476 | ID=MS.gene76243.t1.exon7;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79002476 | 79002538 | 79002476 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79002272 | 79002368 | 79002272 | ID=MS.gene76243.t1.exon8;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79002272 | 79002368 | 79002272 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| chr1.1 | exon | 79001876 | 79001965 | 79001876 | ID=MS.gene76243.t1.exon9;Parent=MS.gene76243.t1 |
| chr1.1 | CDS | 79001876 | 79001965 | 79001876 | ID=cds.MS.gene76243.t1;Parent=MS.gene76243.t1 |
| Gene Sequence |
| Protein sequence |
