Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034900.t1 | AEX20344.1 | 100 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 3.00E-247 | 864 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034900.t1 | Q40977 | 89.5 | 430 | 45 | 0 | 4 | 433 | 3 | 432 | 8.0e-225 | 780.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034900.t1 | H2EIY4 | 100.0 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 2.1e-247 | 864.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034900 | MS.gene054624 | PPI |
| MS.gene034900 | MS.gene052072 | PPI |
| MS.gene034900 | MS.gene013003 | PPI |
| MS.gene034900 | MS.gene48483 | PPI |
| MS.gene034900 | MS.gene049230 | PPI |
| MS.gene034900 | MS.gene044004 | PPI |
| MS.gene034900 | MS.gene40946 | PPI |
| MS.gene034900 | MS.gene013259 | PPI |
| MS.gene034900 | MS.gene06344 | PPI |
| MS.gene035805 | MS.gene034900 | PPI |
| MS.gene034900 | MS.gene044005 | PPI |
| MS.gene034900 | MS.gene67151 | PPI |
| MS.gene034900 | MS.gene064542 | PPI |
| MS.gene034900 | MS.gene78401 | PPI |
| MS.gene034900 | MS.gene67091 | PPI |
| MS.gene24365 | MS.gene034900 | PPI |
| MS.gene034900 | MS.gene73119 | PPI |
| MS.gene034900 | MS.gene062762 | PPI |
| MS.gene034900 | MS.gene45537 | PPI |
| MS.gene034900 | MS.gene31111 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034900.t1 | MTR_1g060620 | 97.926 | 434 | 9 | 0 | 1 | 434 | 1 | 434 | 0.0 | 863 |
| MS.gene034900.t1 | MTR_7g034715 | 55.374 | 428 | 186 | 3 | 4 | 431 | 3 | 425 | 1.61e-172 | 492 |
| MS.gene034900.t1 | MTR_8g098910 | 46.028 | 428 | 206 | 8 | 2 | 417 | 56 | 470 | 1.93e-118 | 355 |
| MS.gene034900.t1 | MTR_8g098910 | 46.028 | 428 | 206 | 8 | 2 | 417 | 47 | 461 | 2.07e-118 | 354 |
| MS.gene034900.t1 | MTR_8g098910 | 46.731 | 413 | 195 | 8 | 2 | 402 | 56 | 455 | 2.32e-115 | 346 |
| MS.gene034900.t1 | MTR_8g098910 | 46.731 | 413 | 195 | 8 | 2 | 402 | 47 | 446 | 2.40e-115 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034900.t1 | AT3G52880 | 78.291 | 433 | 94 | 0 | 1 | 433 | 1 | 433 | 0.0 | 688 |
| MS.gene034900.t1 | AT3G52880 | 72.747 | 466 | 95 | 1 | 1 | 434 | 1 | 466 | 0.0 | 672 |
| MS.gene034900.t1 | AT5G03630 | 74.651 | 430 | 109 | 0 | 3 | 432 | 4 | 433 | 0.0 | 650 |
| MS.gene034900.t1 | AT3G09940 | 65.820 | 433 | 147 | 1 | 3 | 434 | 4 | 436 | 0.0 | 570 |
| MS.gene034900.t1 | AT3G09940 | 65.127 | 433 | 142 | 2 | 3 | 434 | 4 | 428 | 0.0 | 558 |
| MS.gene034900.t1 | AT3G27820 | 55.012 | 429 | 186 | 4 | 4 | 431 | 3 | 425 | 1.10e-158 | 457 |
| MS.gene034900.t1 | AT1G63940 | 45.902 | 427 | 208 | 7 | 1 | 417 | 56 | 469 | 7.62e-123 | 366 |
| MS.gene034900.t1 | AT1G63940 | 45.902 | 427 | 208 | 7 | 1 | 417 | 49 | 462 | 7.86e-123 | 365 |
| MS.gene034900.t1 | AT1G63940 | 44.965 | 427 | 208 | 7 | 1 | 417 | 49 | 458 | 1.71e-118 | 354 |
| MS.gene034900.t1 | AT1G63940 | 47.312 | 372 | 178 | 6 | 1 | 362 | 49 | 412 | 1.26e-108 | 327 |
Find 115 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCATCAAAGCCTAATTT+TGG | 0.178444 | 1.2:+46550899 | MS.gene034900:CDS |
| GCAGCTCCTGCTAGACTTCC+TGG | 0.182558 | 1.2:+46549134 | MS.gene034900:intron |
| ATCCAGTATGTTCCAAAATT+AGG | 0.241603 | 1.2:-46550911 | None:intergenic |
| CCTTTCTCATTGTACCATTC+TGG | 0.242015 | 1.2:-46549197 | None:intergenic |
| AAAATATCTTTAAAATTTAC+TGG | 0.242138 | 1.2:-46551068 | None:intergenic |
| GAAGTTATATACCGCTTCTT+TGG | 0.253487 | 1.2:-46548045 | None:intergenic |
| CACTTACTGCACCAAGGTTC+TGG | 0.254429 | 1.2:-46549813 | None:intergenic |
| TGAGGGATATTATGCAAATA+AGG | 0.254901 | 1.2:+46549965 | MS.gene034900:CDS |
| ATTAAAGACGGGAAAGTTAT+TGG | 0.257644 | 1.2:+46550932 | MS.gene034900:CDS |
| CAAACTTACACTCCGGAAAA+AGG | 0.272710 | 1.2:-46548849 | None:intergenic |
| GTTGGTGACACAGTGCTATT+TGG | 0.278134 | 1.2:+46550863 | MS.gene034900:CDS |
| TCCTGCCTCTGCTGCAATGA+TGG | 0.311126 | 1.2:-46550759 | None:intergenic |
| CTTCAACCTGCCCTTTGAAT+AGG | 0.313300 | 1.2:-46550220 | None:intergenic |
| ATGGGAAAGCTGTGGTTGTT+GGG | 0.325418 | 1.2:+46549721 | MS.gene034900:CDS |
| TTCAACCTGCCCTTTGAATA+GGG | 0.331938 | 1.2:-46550219 | None:intergenic |
| AGCAAGGGAGTTTGTGAAAC+AGG | 0.334221 | 1.2:+46547992 | MS.gene034900:CDS |
| GTTATAAGGTTGACCGATTT+CGG | 0.348452 | 1.2:+46549609 | MS.gene034900:CDS |
| AGGAGTTCCGCCCTCCAAAA+AGG | 0.369207 | 1.2:-46550957 | None:intergenic |
| GCAATAGCTTTGTTCTCATC+AGG | 0.370142 | 1.2:-46550977 | None:intergenic |
| TACCTCTCCATCGGAATTAG+AGG | 0.382642 | 1.2:-46550027 | None:intergenic |
| GAGGGATATTATGCAAATAA+GGG | 0.399575 | 1.2:+46549966 | MS.gene034900:CDS |
| CCCGCTCATTTGATCTGTCT+TGG | 0.402893 | 1.2:+46550822 | MS.gene034900:CDS |
| AATGGGAAAGCTGTGGTTGT+TGG | 0.405868 | 1.2:+46549720 | MS.gene034900:CDS |
| AGCTCCTTCTACACCGAAAT+CGG | 0.406909 | 1.2:-46549622 | None:intergenic |
| GATTGCCTCGTACAATTTGT+CGG | 0.408450 | 1.2:-46549685 | None:intergenic |
| TTCCATACCTGTGTTGGAAG+TGG | 0.409257 | 1.2:+46549158 | MS.gene034900:CDS |
| GGGAGTTAAGCCTGGGGAGC+TGG | 0.410028 | 1.2:+46548013 | MS.gene034900:CDS |
| TTGACCGATTTCGGTGTAGA+AGG | 0.410797 | 1.2:+46549618 | MS.gene034900:CDS |
| AATGAGCGGGAATAGAAGTA+TGG | 0.414692 | 1.2:-46550809 | None:intergenic |
| CAGCTCCTGCTAGACTTCCT+GGG | 0.431228 | 1.2:+46549135 | MS.gene034900:intron |
| TCCATACCTGTGTTGGAAGT+GGG | 0.433327 | 1.2:+46549159 | MS.gene034900:CDS |
| AACATTCAAATACCAGACTT+TGG | 0.436365 | 1.2:+46549471 | MS.gene034900:CDS |
| GATATGATTGCCAGCTCCCC+AGG | 0.439711 | 1.2:-46548023 | None:intergenic |
| CTTAGAGCAGGACGTTCATA+AGG | 0.442351 | 1.2:-46548817 | None:intergenic |
| TGCTCGCAAATCAGCTGAGC+AGG | 0.448272 | 1.2:+46550481 | MS.gene034900:CDS |
| AAATTAGGCTTTGATGATGC+AGG | 0.450521 | 1.2:-46550896 | None:intergenic |
| CAGACTTTGGTTATTGCAAC+GGG | 0.454674 | 1.2:+46549484 | MS.gene034900:CDS |
| GTGAAACAGGGAGTTAAGCC+TGG | 0.456583 | 1.2:+46548005 | MS.gene034900:CDS |
| ACTAAAGGACGGAAGGGTAC+TGG | 0.464010 | 1.2:+46550151 | MS.gene034900:CDS |
| GATATCGTTGTTGTTGGTGT+TGG | 0.464393 | 1.2:+46550179 | MS.gene034900:CDS |
| CTCAAATATCCCTATTCAAA+GGG | 0.465069 | 1.2:+46550210 | MS.gene034900:CDS |
| ATTAAAGGAACTGTTGCTAC+TGG | 0.465914 | 1.2:+46549999 | MS.gene034900:CDS |
| AGAGGAGAAGGGTGGAATCA+AGG | 0.470693 | 1.2:+46550241 | MS.gene034900:CDS |
| ACTTACTGCACCAAGGTTCT+GGG | 0.472875 | 1.2:-46549812 | None:intergenic |
| ACCTCATTGTACAATTTCAA+AGG | 0.474444 | 1.2:-46550434 | None:intergenic |
| GCAATCAAAGGAAAGAAGAA+TGG | 0.475038 | 1.2:+46549702 | MS.gene034900:CDS |
| ATCGTTGTTGTTGGTGTTGG+AGG | 0.475278 | 1.2:+46550182 | MS.gene034900:CDS |
| TGGGAAAGCTGTGGTTGTTG+GGG | 0.478224 | 1.2:+46549722 | MS.gene034900:CDS |
| AAATCTCTGACTAGTGCAAA+AGG | 0.484247 | 1.2:+46549445 | MS.gene034900:CDS |
| GATCTGTCTTGGCAATTCTA+CGG | 0.487729 | 1.2:+46550833 | MS.gene034900:CDS |
| CAATCAAAGGAAAGAAGAAT+GGG | 0.494313 | 1.2:+46549703 | MS.gene034900:CDS |
| CCTCATTGTACAATTTCAAA+GGG | 0.496085 | 1.2:-46550433 | None:intergenic |
| ATCAGCTGAGCAGGCTGCGA+AGG | 0.503643 | 1.2:+46550490 | MS.gene034900:CDS |
| CCCCACTTCCAACACAGGTA+TGG | 0.504218 | 1.2:-46549160 | None:intergenic |
| CCTGGGTTCCATACCTGTGT+TGG | 0.504798 | 1.2:+46549152 | MS.gene034900:CDS |
| CCTCAAATATCCCTATTCAA+AGG | 0.504920 | 1.2:+46550209 | MS.gene034900:CDS |
| GCCATCATTGCAGCAGAGGC+AGG | 0.506274 | 1.2:+46550758 | MS.gene034900:CDS |
| TGATTCACATCCTTGACTGC+AGG | 0.506442 | 1.2:-46551019 | None:intergenic |
| AGGGCAGGTTGAAGAGGAGA+AGG | 0.510981 | 1.2:+46550229 | MS.gene034900:CDS |
| CCGTTGCAATAACCAAAGTC+TGG | 0.512143 | 1.2:-46549483 | None:intergenic |
| CAGGTTGAAGAGGAGAAGGG+TGG | 0.514261 | 1.2:+46550233 | MS.gene034900:CDS |
| TTCAAGTACATCATCGTTGG+TGG | 0.514305 | 1.2:+46547556 | MS.gene034900:CDS |
| CCCTTTGAAATTGTACAATG+AGG | 0.515845 | 1.2:+46550433 | MS.gene034900:CDS |
| AAGAGCATTGCCTGCAGTCA+AGG | 0.516326 | 1.2:+46551009 | MS.gene034900:CDS |
| TGAAATAGCTGCGTTCTATG+AGG | 0.518052 | 1.2:+46549947 | MS.gene034900:CDS |
| CCTTTGAATAGGGATATTTG+AGG | 0.518462 | 1.2:-46550209 | None:intergenic |
| CCAGACTTTGGTTATTGCAA+CGG | 0.522695 | 1.2:+46549483 | MS.gene034900:CDS |
| CCATACCTGTGTTGGAAGTG+GGG | 0.529148 | 1.2:+46549160 | MS.gene034900:CDS |
| AATATCCCTATTCAAAGGGC+AGG | 0.530083 | 1.2:+46550214 | MS.gene034900:CDS |
| GAAGCAGATATCGTTGTTGT+TGG | 0.531051 | 1.2:+46550173 | MS.gene034900:CDS |
| TGAAACAGGGAGTTAAGCCT+GGG | 0.531517 | 1.2:+46548006 | MS.gene034900:CDS |
| AGGTAAGCCTTGCTTAGAGC+AGG | 0.532956 | 1.2:-46548829 | None:intergenic |
| GGAACATACTGGATTAAAGA+CGG | 0.545200 | 1.2:+46550920 | MS.gene034900:CDS |
| GGTAAAAGAAGTCAAACTAA+AGG | 0.545234 | 1.2:+46550136 | MS.gene034900:intron |
| TGGAACCCAGGAAGTCTAGC+AGG | 0.547573 | 1.2:-46549140 | None:intergenic |
| GAACATACTGGATTAAAGAC+GGG | 0.548378 | 1.2:+46550921 | MS.gene034900:CDS |
| CCAGAATGGTACAATGAGAA+AGG | 0.552633 | 1.2:+46549197 | MS.gene034900:CDS |
| AAGTCAAACTAAAGGACGGA+AGG | 0.553804 | 1.2:+46550144 | MS.gene034900:CDS |
| AAGTACATCATCGTTGGTGG+TGG | 0.558707 | 1.2:+46547559 | MS.gene034900:CDS |
| GAAATAGCTGCGTTCTATGA+GGG | 0.560533 | 1.2:+46549948 | MS.gene034900:CDS |
| GCCAAGACAGATCAAATGAG+CGG | 0.563154 | 1.2:-46550823 | None:intergenic |
| GTTTCCAATGTATATGCTGT+TGG | 0.565674 | 1.2:+46550395 | MS.gene034900:CDS |
| TCATTCAAGTACATCATCGT+TGG | 0.568162 | 1.2:+46547553 | MS.gene034900:CDS |
| CCAAGACAGATCAAATGAGC+GGG | 0.570191 | 1.2:-46550822 | None:intergenic |
| GTGAATCAACTTGCAAAGGA+AGG | 0.570354 | 1.2:+46551034 | MS.gene034900:CDS |
| GGATGTGAATCAACTTGCAA+AGG | 0.570956 | 1.2:+46551030 | MS.gene034900:CDS |
| ATTCAAAGGGCAGGTTGAAG+AGG | 0.578439 | 1.2:+46550223 | MS.gene034900:CDS |
| GAGAAAGATTGCTTCCAGAA+TGG | 0.579572 | 1.2:+46549183 | MS.gene034900:CDS |
| GCAGGCCATCATTGCAGCAG+AGG | 0.583036 | 1.2:+46550754 | MS.gene034900:intron |
| AAATTGTACGAGGCAATCAA+AGG | 0.584541 | 1.2:+46549690 | MS.gene034900:CDS |
| GGATTCACCTCTAATTCCGA+TGG | 0.584598 | 1.2:+46550020 | MS.gene034900:CDS |
| GGGAAAGCTGTGGTTGTTGG+GGG | 0.584691 | 1.2:+46549723 | MS.gene034900:CDS |
| AATTGTAGGGTTATGCAGCA+AGG | 0.585751 | 1.2:+46547976 | MS.gene034900:intron |
| CAATTCTACGGCGACAACGT+TGG | 0.592292 | 1.2:+46550845 | MS.gene034900:CDS |
| AGGGATATTATGCAAATAAG+GGG | 0.599658 | 1.2:+46549967 | MS.gene034900:CDS |
| ATTGTAGGGTTATGCAGCAA+GGG | 0.600524 | 1.2:+46547977 | MS.gene034900:intron |
| ATGCGGCCATACCTCTCCAT+CGG | 0.604691 | 1.2:-46550036 | None:intergenic |
| CACCTCTAATTCCGATGGAG+AGG | 0.604818 | 1.2:+46550025 | MS.gene034900:CDS |
| ATCGCCAACAGCATATACAT+TGG | 0.608592 | 1.2:-46550399 | None:intergenic |
| CAATAATATTGATGTTACCA+TGG | 0.614036 | 1.2:+46549785 | MS.gene034900:CDS |
| CATACCTGTGTTGGAAGTGG+GGG | 0.614897 | 1.2:+46549161 | MS.gene034900:CDS |
| CCATGGTCTACCCAGAACCT+TGG | 0.617370 | 1.2:+46549802 | MS.gene034900:CDS |
| GGGCAGGTTGAAGAGGAGAA+GGG | 0.619159 | 1.2:+46550230 | MS.gene034900:CDS |
| GGCAATCATATCCAAAGAAG+CGG | 0.620227 | 1.2:+46548034 | MS.gene034900:CDS |
| GCAAGGGAGTTTGTGAAACA+GGG | 0.620845 | 1.2:+46547993 | MS.gene034900:CDS |
| CCAACACAGGTATGGAACCC+AGG | 0.626347 | 1.2:-46549152 | None:intergenic |
| CCAAGGTTCTGGGTAGACCA+TGG | 0.634221 | 1.2:-46549802 | None:intergenic |
| AAAGAAGTCAAACTAAAGGA+CGG | 0.634551 | 1.2:+46550140 | MS.gene034900:CDS |
| TGAACGTCCTGCTCTAAGCA+AGG | 0.638367 | 1.2:+46548822 | MS.gene034900:CDS |
| AGTCAAACTAAAGGACGGAA+GGG | 0.640917 | 1.2:+46550145 | MS.gene034900:CDS |
| AAAGAAGAATGGGAAAGCTG+TGG | 0.672130 | 1.2:+46549713 | MS.gene034900:CDS |
| GGGATATTATGCAAATAAGG+GGG | 0.714196 | 1.2:+46549968 | MS.gene034900:CDS |
| AATGTCCACTTACTGCACCA+AGG | 0.718065 | 1.2:-46549819 | None:intergenic |
| TGATGCCGACAAATTGTACG+AGG | 0.731621 | 1.2:+46549680 | MS.gene034900:CDS |
| GAAACAGGGAGTTAAGCCTG+GGG | 0.761504 | 1.2:+46548007 | MS.gene034900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGAATTAAAATAAAATAA+GGG | - | chr1.2:46549242-46549261 | None:intergenic | 10.0% |
| !! | TTTCATTTAATTCTTATATT+TGG | + | chr1.2:46548094-46548113 | MS.gene034900:intron | 10.0% |
| !!! | ATAAAATTTTAAACTTCATA+TGG | - | chr1.2:46548191-46548210 | None:intergenic | 10.0% |
| !!! | CAAAAATATATTTTATTTGA+GGG | + | chr1.2:46549650-46549669 | MS.gene034900:CDS | 10.0% |
| !!! | TTGATGATTAAATTATTTTT+TGG | + | chr1.2:46547928-46547947 | MS.gene034900:intron | 10.0% |
| !! | AATGAAAAAAAAAACAAAAG+TGG | - | chr1.2:46548081-46548100 | None:intergenic | 15.0% |
| !! | AGAATTAAAATAAAATAAGG+GGG | - | chr1.2:46549240-46549259 | None:intergenic | 15.0% |
| !! | AGATAAGTAAATATAAGAAT+GGG | + | chr1.2:46549320-46549339 | MS.gene034900:intron | 15.0% |
| !! | CACAGAATTAAAATAAAATA+AGG | - | chr1.2:46549243-46549262 | None:intergenic | 15.0% |
| !! | CAGAATTAAAATAAAATAAG+GGG | - | chr1.2:46549241-46549260 | None:intergenic | 15.0% |
| !!! | ATTTGGTTATACTTTTTTAA+TGG | + | chr1.2:46548111-46548130 | MS.gene034900:intron | 15.0% |
| !!! | CCAAAAATATATTTTATTTG+AGG | + | chr1.2:46549649-46549668 | MS.gene034900:CDS | 15.0% |
| !!! | CCTCAAATAAAATATATTTT+TGG | - | chr1.2:46549652-46549671 | None:intergenic | 15.0% |
| !!! | TTTTAATTCTGTGTTATATT+TGG | + | chr1.2:46549250-46549269 | MS.gene034900:intron | 15.0% |
| !!! | TTTTGAATTATATTTAGTGA+AGG | + | chr1.2:46549000-46549019 | MS.gene034900:intron | 15.0% |
| !! | AAAAAATTCAGAAGAATCTA+CGG | - | chr1.2:46547659-46547678 | None:intergenic | 20.0% |
| !! | AAGTTAAGCAAAATTTGATT+AGG | - | chr1.2:46550102-46550121 | None:intergenic | 20.0% |
| !! | ATTGAAACAAGAATCAAAAT+TGG | - | chr1.2:46547611-46547630 | None:intergenic | 20.0% |
| !! | GAGATAAGTAAATATAAGAA+TGG | + | chr1.2:46549319-46549338 | MS.gene034900:intron | 20.0% |
| !! | GATATTAGAAATGTTACATT+CGG | + | chr1.2:46549529-46549548 | MS.gene034900:intron | 20.0% |
| !! | TGTAACAATTCTATGTTAAA+GGG | + | chr1.2:46547704-46547723 | MS.gene034900:intron | 20.0% |
| !! | TTTGTGAGTAAATATTCTAT+AGG | + | chr1.2:46548355-46548374 | MS.gene034900:intron | 20.0% |
| !!! | AAATATATTTTATTTGAGGG+AGG | + | chr1.2:46549653-46549672 | MS.gene034900:CDS | 20.0% |
| !!! | ATGGTTTTCAGAATAAATAT+TGG | + | chr1.2:46549273-46549292 | MS.gene034900:intron | 20.0% |
| !!! | GTAAAAATTCGAAATTTTTC+AGG | - | chr1.2:46548615-46548634 | None:intergenic | 20.0% |
| !!! | TACTAATAATTTTGTTTTGC+AGG | + | chr1.2:46549587-46549606 | MS.gene034900:intron | 20.0% |
| !!! | TGGTTTTCAGAATAAATATT+GGG | + | chr1.2:46549274-46549293 | MS.gene034900:intron | 20.0% |
| !!! | TTTTTTGGATTGAATAATTG+AGG | + | chr1.2:46547943-46547962 | MS.gene034900:intron | 20.0% |
| ! | AACCAAAATGATTTCAAAAC+TGG | - | chr1.2:46550604-46550623 | None:intergenic | 25.0% |
| ! | AATTCTGTGTTATATTTGGA+TGG | + | chr1.2:46549254-46549273 | MS.gene034900:intron | 25.0% |
| ! | ACCAAAATGATTTCAAAACT+GGG | - | chr1.2:46550603-46550622 | None:intergenic | 25.0% |
| ! | AGATACATATCATGAAATTC+AGG | - | chr1.2:46548527-46548546 | None:intergenic | 25.0% |
| ! | ATCCAACTTAATGTTACAAT+TGG | + | chr1.2:46549105-46549124 | MS.gene034900:intron | 25.0% |
| ! | ATCCAATTGTAACATTAAGT+TGG | - | chr1.2:46549110-46549129 | None:intergenic | 25.0% |
| ! | CAATAATATTGATGTTACCA+TGG | + | chr1.2:46549785-46549804 | MS.gene034900:CDS | 25.0% |
| ! | CTGTAACAATTCTATGTTAA+AGG | + | chr1.2:46547703-46547722 | MS.gene034900:intron | 25.0% |
| ! | GTAGAATTATAAAGATCGAT+CGG | - | chr1.2:46547637-46547656 | None:intergenic | 25.0% |
| ! | TAACATTTCTAATATCAGCA+AGG | - | chr1.2:46549525-46549544 | None:intergenic | 25.0% |
| ! | TAATTAACCCATAACAGAAT+GGG | - | chr1.2:46548922-46548941 | None:intergenic | 25.0% |
| ! | TATGTTAAAGGGATTAGAAT+CGG | + | chr1.2:46547715-46547734 | MS.gene034900:intron | 25.0% |
| ! | TTAATTAACCCATAACAGAA+TGG | - | chr1.2:46548923-46548942 | None:intergenic | 25.0% |
| !! | AATTTTTCACAGTATTCACA+AGG | - | chr1.2:46547763-46547782 | None:intergenic | 25.0% |
| !! | ACGTGGTACAAAATTTTAAA+AGG | - | chr1.2:46548719-46548738 | None:intergenic | 25.0% |
| !! | ATTTTGTACCACGTATTTAT+TGG | + | chr1.2:46548725-46548744 | MS.gene034900:intron | 25.0% |
| !! | TATCAATGATACATTTGTTG+TGG | + | chr1.2:46550342-46550361 | MS.gene034900:intron | 25.0% |
| !!! | ACTTTTTTAATGGTGATAGT+GGG | + | chr1.2:46548121-46548140 | MS.gene034900:intron | 25.0% |
| !!! | AGGTGTTTTTTGAAATTGTA+GGG | + | chr1.2:46547963-46547982 | MS.gene034900:intron | 25.0% |
| !!! | ATGTGCTATTTAAACTTCAA+TGG | - | chr1.2:46549063-46549082 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTGCAGGTTATA+AGG | + | chr1.2:46549595-46549614 | MS.gene034900:intron | 25.0% |
| !!! | GGACATATTTTTGCATTTTT+AGG | + | chr1.2:46548669-46548688 | MS.gene034900:intron | 25.0% |
| !!! | GTATGACTTTTAAAGTAGAA+AGG | + | chr1.2:46547859-46547878 | MS.gene034900:intron | 25.0% |
| !!! | TACTTTTTTAATGGTGATAG+TGG | + | chr1.2:46548120-46548139 | MS.gene034900:intron | 25.0% |
| !!! | TATGCTTTGCTTTGAATTTT+TGG | + | chr1.2:46547790-46547809 | MS.gene034900:intron | 25.0% |
| !!! | TTTTTTTTTTGCTTTCATGC+AGG | + | chr1.2:46550736-46550755 | MS.gene034900:intron | 25.0% |
| AAAGAAGTCAAACTAAAGGA+CGG | + | chr1.2:46550140-46550159 | MS.gene034900:CDS | 30.0% | |
| AAATTGAACCAATGATTGCA+GGG | + | chr1.2:46549374-46549393 | MS.gene034900:intron | 30.0% | |
| AACATTCAAATACCAGACTT+TGG | + | chr1.2:46549471-46549490 | MS.gene034900:CDS | 30.0% | |
| AATTAACCCATAACAGAATG+GGG | - | chr1.2:46548921-46548940 | None:intergenic | 30.0% | |
| ACCTCATTGTACAATTTCAA+AGG | - | chr1.2:46550437-46550456 | None:intergenic | 30.0% | |
| AGGGATATTATGCAAATAAG+GGG | + | chr1.2:46549967-46549986 | MS.gene034900:CDS | 30.0% | |
| AGTAATTAGTATGCGCTAAA+AGG | - | chr1.2:46549571-46549590 | None:intergenic | 30.0% | |
| AGTGAAGGTTATGTTATCTT+GGG | + | chr1.2:46549015-46549034 | MS.gene034900:intron | 30.0% | |
| ATCCAGTATGTTCCAAAATT+AGG | - | chr1.2:46550914-46550933 | None:intergenic | 30.0% | |
| ATGAAATTCAGGAAATAGTG+TGG | - | chr1.2:46548516-46548535 | None:intergenic | 30.0% | |
| ATTAAAGACGGGAAAGTTAT+TGG | + | chr1.2:46550932-46550951 | MS.gene034900:CDS | 30.0% | |
| ATTTCAGCAGTAAAAAGTCT+TGG | - | chr1.2:46549933-46549952 | None:intergenic | 30.0% | |
| CAAAAATATGTCCATCACAA+GGG | - | chr1.2:46548662-46548681 | None:intergenic | 30.0% | |
| CAATCAAAGGAAAGAAGAAT+GGG | + | chr1.2:46549703-46549722 | MS.gene034900:CDS | 30.0% | |
| CACAAAGGTAAGATATGTAA+GGG | - | chr1.2:46548788-46548807 | None:intergenic | 30.0% | |
| CCTCATTGTACAATTTCAAA+GGG | - | chr1.2:46550436-46550455 | None:intergenic | 30.0% | |
| CTCAAATATCCCTATTCAAA+GGG | + | chr1.2:46550210-46550229 | MS.gene034900:CDS | 30.0% | |
| CTTAATAAGACACTTCCATA+TGG | - | chr1.2:46550681-46550700 | None:intergenic | 30.0% | |
| GAGGGATATTATGCAAATAA+GGG | + | chr1.2:46549966-46549985 | MS.gene034900:CDS | 30.0% | |
| GGTAAAAGAAGTCAAACTAA+AGG | + | chr1.2:46550136-46550155 | MS.gene034900:intron | 30.0% | |
| TAAATTGAACCAATGATTGC+AGG | + | chr1.2:46549373-46549392 | MS.gene034900:intron | 30.0% | |
| TACAATGAGAAAGGTGAATT+TGG | + | chr1.2:46549206-46549225 | MS.gene034900:intron | 30.0% | |
| TAGTGAAGGTTATGTTATCT+TGG | + | chr1.2:46549014-46549033 | MS.gene034900:intron | 30.0% | |
| TGAGGGATATTATGCAAATA+AGG | + | chr1.2:46549965-46549984 | MS.gene034900:CDS | 30.0% | |
| ! | AAACACATGTATCCTTTTTC+CGG | + | chr1.2:46550556-46550575 | MS.gene034900:intron | 30.0% |
| ! | ACATGTGTTTTGTGCATAAT+TGG | - | chr1.2:46550546-46550565 | None:intergenic | 30.0% |
| ! | CGTAAAACTTTTGACACTAT+TGG | + | chr1.2:46547837-46547856 | MS.gene034900:intron | 30.0% |
| ! | TGGAGAAGCATAAATATGTA+GGG | - | chr1.2:46550526-46550545 | None:intergenic | 30.0% |
| ! | TTGGAGAAGCATAAATATGT+AGG | - | chr1.2:46550527-46550546 | None:intergenic | 30.0% |
| !!! | ACCCAGTTTTGAAATCATTT+TGG | + | chr1.2:46550599-46550618 | MS.gene034900:intron | 30.0% |
| !!! | CTTTTTTAATGGTGATAGTG+GGG | + | chr1.2:46548122-46548141 | MS.gene034900:intron | 30.0% |
| !!! | GAGGTGTTTTTTGAAATTGT+AGG | + | chr1.2:46547962-46547981 | MS.gene034900:intron | 30.0% |
| !!! | GGAAACATTTGTTTTGAAGA+AGG | - | chr1.2:46550381-46550400 | None:intergenic | 30.0% |
| !!! | TGAAATCATTTTGGTTCCTT+AGG | + | chr1.2:46550608-46550627 | MS.gene034900:intron | 30.0% |
| AAATCTCTGACTAGTGCAAA+AGG | + | chr1.2:46549445-46549464 | MS.gene034900:CDS | 35.0% | |
| AAATTGTACGAGGCAATCAA+AGG | + | chr1.2:46549690-46549709 | MS.gene034900:CDS | 35.0% | |
| AAGGGGGTCAATATCATTAA+AGG | + | chr1.2:46549984-46550003 | MS.gene034900:CDS | 35.0% | |
| AATAAGACACTTCCATATGG+AGG | - | chr1.2:46550678-46550697 | None:intergenic | 35.0% | |
| AATTGAACCAATGATTGCAG+GGG | + | chr1.2:46549375-46549394 | MS.gene034900:intron | 35.0% | |
| ACAGAATGGGGGAAAATTAA+AGG | - | chr1.2:46548909-46548928 | None:intergenic | 35.0% | |
| AGCATTACAAACTTACACTC+CGG | - | chr1.2:46548859-46548878 | None:intergenic | 35.0% | |
| ATGATTTCAAAACTGGGTGT+CGG | - | chr1.2:46550597-46550616 | None:intergenic | 35.0% | |
| ATTAAAGGAACTGTTGCTAC+TGG | + | chr1.2:46549999-46550018 | MS.gene034900:CDS | 35.0% | |
| ATTAACCCATAACAGAATGG+GGG | - | chr1.2:46548920-46548939 | None:intergenic | 35.0% | |
| CAAAAATCCATAACTGCACA+AGG | - | chr1.2:46548756-46548775 | None:intergenic | 35.0% | |
| CCTCAAATATCCCTATTCAA+AGG | + | chr1.2:46550209-46550228 | MS.gene034900:CDS | 35.0% | |
| CCTTTGAATAGGGATATTTG+AGG | - | chr1.2:46550212-46550231 | None:intergenic | 35.0% | |
| GAACATACTGGATTAAAGAC+GGG | + | chr1.2:46550921-46550940 | MS.gene034900:CDS | 35.0% | |
| GAAGTTATATACCGCTTCTT+TGG | - | chr1.2:46548048-46548067 | None:intergenic | 35.0% | |
| GAGAAAAACACAAGAGGATA+AGG | - | chr1.2:46548448-46548467 | None:intergenic | 35.0% | |
| GCAAAAATATGTCCATCACA+AGG | - | chr1.2:46548663-46548682 | None:intergenic | 35.0% | |
| GCAATCAAAGGAAAGAAGAA+TGG | + | chr1.2:46549702-46549721 | MS.gene034900:CDS | 35.0% | |
| GCACAAAGGTAAGATATGTA+AGG | - | chr1.2:46548789-46548808 | None:intergenic | 35.0% | |
| GGAAAATTAAAGGAGGAAAG+GGG | - | chr1.2:46548899-46548918 | None:intergenic | 35.0% | |
| GGAACATACTGGATTAAAGA+CGG | + | chr1.2:46550920-46550939 | MS.gene034900:CDS | 35.0% | |
| GGGAAAATTAAAGGAGGAAA+GGG | - | chr1.2:46548900-46548919 | None:intergenic | 35.0% | |
| GGGATATTATGCAAATAAGG+GGG | + | chr1.2:46549968-46549987 | MS.gene034900:CDS | 35.0% | |
| GGGTTATTGTGTCAAGTTAA+AGG | + | chr1.2:46549294-46549313 | MS.gene034900:intron | 35.0% | |
| GTTTCCAATGTATATGCTGT+TGG | + | chr1.2:46550395-46550414 | MS.gene034900:CDS | 35.0% | |
| TAAATTTCTCGGGACGAATA+TGG | - | chr1.2:46548574-46548593 | None:intergenic | 35.0% | |
| TACATATCTTACCTTTGTGC+AGG | + | chr1.2:46548789-46548808 | MS.gene034900:intron | 35.0% | |
| TCATTCAAGTACATCATCGT+TGG | + | chr1.2:46547553-46547572 | MS.gene034900:CDS | 35.0% | |
| TGTCCCATCACTAAATTTCT+CGG | - | chr1.2:46548585-46548604 | None:intergenic | 35.0% | |
| TTAACTTTCATCCATCTGTC+AGG | + | chr1.2:46550115-46550134 | MS.gene034900:intron | 35.0% | |
| TTGATGGAGAAAAACACAAG+AGG | - | chr1.2:46548454-46548473 | None:intergenic | 35.0% | |
| ! | AACATGTGCATGTTGTTTGA+AGG | + | chr1.2:46548149-46548168 | MS.gene034900:intron | 35.0% |
| ! | AATTTTCCCCCATTCTGTTA+TGG | + | chr1.2:46548911-46548930 | MS.gene034900:intron | 35.0% |
| ! | ACATGCACAAACTTCTTTTC+TGG | + | chr1.2:46550651-46550670 | MS.gene034900:intron | 35.0% |
| ! | ACATGTGCATGTTGTTTGAA+GGG | + | chr1.2:46548150-46548169 | MS.gene034900:intron | 35.0% |
| ! | ATTTTCCCCCATTCTGTTAT+GGG | + | chr1.2:46548912-46548931 | MS.gene034900:intron | 35.0% |
| ! | GCATCATCAAAGCCTAATTT+TGG | + | chr1.2:46550899-46550918 | MS.gene034900:CDS | 35.0% |
| ! | GTTATAAGGTTGACCGATTT+CGG | + | chr1.2:46549609-46549628 | MS.gene034900:CDS | 35.0% |
| !! | AAATTAGGCTTTGATGATGC+AGG | - | chr1.2:46550899-46550918 | None:intergenic | 35.0% |
| !! | ACTTTCAACGTCTTGTTTGA+TGG | - | chr1.2:46548470-46548489 | None:intergenic | 35.0% |
| !! | CCCTTTGAAATTGTACAATG+AGG | + | chr1.2:46550433-46550452 | MS.gene034900:CDS | 35.0% |
| !! | GAAAGTTATTGGTGCCTTTT+TGG | + | chr1.2:46550943-46550962 | MS.gene034900:CDS | 35.0% |
| !!! | AGCCTAATTTTGGAACATAC+TGG | + | chr1.2:46550909-46550928 | MS.gene034900:CDS | 35.0% |
| AAAGAAGAATGGGAAAGCTG+TGG | + | chr1.2:46549713-46549732 | MS.gene034900:CDS | 40.0% | |
| AAGTCAAACTAAAGGACGGA+AGG | + | chr1.2:46550144-46550163 | MS.gene034900:CDS | 40.0% | |
| AATATCCCTATTCAAAGGGC+AGG | + | chr1.2:46550214-46550233 | MS.gene034900:CDS | 40.0% | |
| AATGAGCGGGAATAGAAGTA+TGG | - | chr1.2:46550812-46550831 | None:intergenic | 40.0% | |
| AATTGTAGGGTTATGCAGCA+AGG | + | chr1.2:46547976-46547995 | MS.gene034900:intron | 40.0% | |
| AGTCAAACTAAAGGACGGAA+GGG | + | chr1.2:46550145-46550164 | MS.gene034900:CDS | 40.0% | |
| ATCGCCAACAGCATATACAT+TGG | - | chr1.2:46550402-46550421 | None:intergenic | 40.0% | |
| ATGCACAAATTCGCATGAGT+GGG | - | chr1.2:46549868-46549887 | None:intergenic | 40.0% | |
| ATTGTAGGGTTATGCAGCAA+GGG | + | chr1.2:46547977-46547996 | MS.gene034900:intron | 40.0% | |
| CAAACTTACACTCCGGAAAA+AGG | - | chr1.2:46548852-46548871 | None:intergenic | 40.0% | |
| CACAAGGGAATGATAGGTAA+GGG | - | chr1.2:46548647-46548666 | None:intergenic | 40.0% | |
| CAGACTTTGGTTATTGCAAC+GGG | + | chr1.2:46549484-46549503 | MS.gene034900:CDS | 40.0% | |
| CCAGAATGGTACAATGAGAA+AGG | + | chr1.2:46549197-46549216 | MS.gene034900:CDS | 40.0% | |
| CCAGACTTTGGTTATTGCAA+CGG | + | chr1.2:46549483-46549502 | MS.gene034900:CDS | 40.0% | |
| CCTTTCTCATTGTACCATTC+TGG | - | chr1.2:46549200-46549219 | None:intergenic | 40.0% | |
| GAAATAGCTGCGTTCTATGA+GGG | + | chr1.2:46549948-46549967 | MS.gene034900:CDS | 40.0% | |
| GAAGCAGATATCGTTGTTGT+TGG | + | chr1.2:46550173-46550192 | MS.gene034900:CDS | 40.0% | |
| GAATGGGGGAAAATTAAAGG+AGG | - | chr1.2:46548906-46548925 | None:intergenic | 40.0% | |
| GAGAAAGATTGCTTCCAGAA+TGG | + | chr1.2:46549183-46549202 | MS.gene034900:CDS | 40.0% | |
| GATATTCAGAGTGACAAGCA+AGG | - | chr1.2:46549088-46549107 | None:intergenic | 40.0% | |
| GATCTGTCTTGGCAATTCTA+CGG | + | chr1.2:46550833-46550852 | MS.gene034900:CDS | 40.0% | |
| GATTGCCTCGTACAATTTGT+CGG | - | chr1.2:46549688-46549707 | None:intergenic | 40.0% | |
| GGATGTGAATCAACTTGCAA+AGG | + | chr1.2:46551030-46551049 | MS.gene034900:CDS | 40.0% | |
| GGCAATCATATCCAAAGAAG+CGG | + | chr1.2:46548034-46548053 | MS.gene034900:CDS | 40.0% | |
| GGGGAAAATTAAAGGAGGAA+AGG | - | chr1.2:46548901-46548920 | None:intergenic | 40.0% | |
| GTCCCATCACTAAATTTCTC+GGG | - | chr1.2:46548584-46548603 | None:intergenic | 40.0% | |
| GTCCCGAGAAATTTAGTGAT+GGG | + | chr1.2:46548579-46548598 | MS.gene034900:intron | 40.0% | |
| GTGAATCAACTTGCAAAGGA+AGG | + | chr1.2:46551034-46551053 | MS.gene034900:CDS | 40.0% | |
| GTTAGTGATACCATATCCAG+AGG | + | chr1.2:46550263-46550282 | MS.gene034900:intron | 40.0% | |
| TACCACAAAATGAACAGCAC+TGG | - | chr1.2:46550715-46550734 | None:intergenic | 40.0% | |
| TACCTATCATTCCCTTGTGA+TGG | + | chr1.2:46548648-46548667 | MS.gene034900:intron | 40.0% | |
| TATGCACAAATTCGCATGAG+TGG | - | chr1.2:46549869-46549888 | None:intergenic | 40.0% | |
| TCACAAGGGAATGATAGGTA+AGG | - | chr1.2:46548648-46548667 | None:intergenic | 40.0% | |
| TGAAATAGCTGCGTTCTATG+AGG | + | chr1.2:46549947-46549966 | MS.gene034900:CDS | 40.0% | |
| TGATTTCAAAACTGGGTGTC+GGG | - | chr1.2:46550596-46550615 | None:intergenic | 40.0% | |
| TGCATGTTCTGCTATGTAGA+AGG | - | chr1.2:46550638-46550657 | None:intergenic | 40.0% | |
| TGTTCTGCTATGTAGAAGGT+TGG | - | chr1.2:46550634-46550653 | None:intergenic | 40.0% | |
| TTCAACCTGCCCTTTGAATA+GGG | - | chr1.2:46550222-46550241 | None:intergenic | 40.0% | |
| TTCAAGTACATCATCGTTGG+TGG | + | chr1.2:46547556-46547575 | MS.gene034900:CDS | 40.0% | |
| ! | AAGCAAGGCTTACCTTTTTC+CGG | + | chr1.2:46548837-46548856 | MS.gene034900:CDS | 40.0% |
| ! | GACTTCTTTTACCTGACAGA+TGG | - | chr1.2:46550129-46550148 | None:intergenic | 40.0% |
| ! | GATATCGTTGTTGTTGGTGT+TGG | + | chr1.2:46550179-46550198 | MS.gene034900:CDS | 40.0% |
| ! | TAGTCAGAGATTTTGCAGCA+AGG | - | chr1.2:46549438-46549457 | None:intergenic | 40.0% |
| !! | AGTTATTGGTGCCTTTTTGG+AGG | + | chr1.2:46550946-46550965 | MS.gene034900:CDS | 40.0% |
| !! | GCAATAGCTTTGTTCTCATC+AGG | - | chr1.2:46550980-46550999 | None:intergenic | 40.0% |
| !! | GTTATTGGTGCCTTTTTGGA+GGG | + | chr1.2:46550947-46550966 | MS.gene034900:CDS | 40.0% |
| !! | TTCTTTTCTGGTCCTCCATA+TGG | + | chr1.2:46550663-46550682 | MS.gene034900:intron | 40.0% |
| AACTGTACCCCTGCAATCAT+TGG | - | chr1.2:46549385-46549404 | None:intergenic | 45.0% | |
| AATGGGAAAGCTGTGGTTGT+TGG | + | chr1.2:46549720-46549739 | MS.gene034900:CDS | 45.0% | |
| AATGTCCACTTACTGCACCA+AGG | - | chr1.2:46549822-46549841 | None:intergenic | 45.0% | |
| ACTTACTGCACCAAGGTTCT+GGG | - | chr1.2:46549815-46549834 | None:intergenic | 45.0% | |
| AGCAAGGGAGTTTGTGAAAC+AGG | + | chr1.2:46547992-46548011 | MS.gene034900:CDS | 45.0% | |
| AGCTCCTTCTACACCGAAAT+CGG | - | chr1.2:46549625-46549644 | None:intergenic | 45.0% | |
| AGGCTCAGCCAATAAATACG+TGG | - | chr1.2:46548736-46548755 | None:intergenic | 45.0% | |
| ATAGGGATCATGCCGGAAAA+AGG | - | chr1.2:46550571-46550590 | None:intergenic | 45.0% | |
| ATGGGAAAGCTGTGGTTGTT+GGG | + | chr1.2:46549721-46549740 | MS.gene034900:CDS | 45.0% | |
| CAGTATTCCGAGATCACATG+CGG | - | chr1.2:46550056-46550075 | None:intergenic | 45.0% | |
| CCAAGACAGATCAAATGAGC+GGG | - | chr1.2:46550825-46550844 | None:intergenic | 45.0% | |
| CCGTTGCAATAACCAAAGTC+TGG | - | chr1.2:46549486-46549505 | None:intergenic | 45.0% | |
| CGTCCCGAGAAATTTAGTGA+TGG | + | chr1.2:46548578-46548597 | MS.gene034900:intron | 45.0% | |
| CTAATTCCGATGGAGAGGTA+TGG | + | chr1.2:46550030-46550049 | MS.gene034900:intron | 45.0% | |
| CTCGGAATACTGTCATGTGA+TGG | + | chr1.2:46550064-46550083 | MS.gene034900:intron | 45.0% | |
| CTTAGAGCAGGACGTTCATA+AGG | - | chr1.2:46548820-46548839 | None:intergenic | 45.0% | |
| CTTCAACCTGCCCTTTGAAT+AGG | - | chr1.2:46550223-46550242 | None:intergenic | 45.0% | |
| GCAAGGGAGTTTGTGAAACA+GGG | + | chr1.2:46547993-46548012 | MS.gene034900:CDS | 45.0% | |
| GCCAAGACAGATCAAATGAG+CGG | - | chr1.2:46550826-46550845 | None:intergenic | 45.0% | |
| GGATTCACCTCTAATTCCGA+TGG | + | chr1.2:46550020-46550039 | MS.gene034900:CDS | 45.0% | |
| GTCCATCACAAGGGAATGAT+AGG | - | chr1.2:46548653-46548672 | None:intergenic | 45.0% | |
| TAAAGCTTGACACAAGCCTC+TGG | - | chr1.2:46550282-46550301 | None:intergenic | 45.0% | |
| TACCTCTCCATCGGAATTAG+AGG | - | chr1.2:46550030-46550049 | None:intergenic | 45.0% | |
| TCCATACCTGTGTTGGAAGT+GGG | + | chr1.2:46549159-46549178 | MS.gene034900:CDS | 45.0% | |
| TGAAACAGGGAGTTAAGCCT+GGG | + | chr1.2:46548006-46548025 | MS.gene034900:CDS | 45.0% | |
| TGATGCCGACAAATTGTACG+AGG | + | chr1.2:46549680-46549699 | MS.gene034900:CDS | 45.0% | |
| TGATTCACATCCTTGACTGC+AGG | - | chr1.2:46551022-46551041 | None:intergenic | 45.0% | |
| TTCCATACCTGTGTTGGAAG+TGG | + | chr1.2:46549158-46549177 | MS.gene034900:CDS | 45.0% | |
| TTGACACAAGCCTCTGGATA+TGG | - | chr1.2:46550276-46550295 | None:intergenic | 45.0% | |
| ! | AAGTACATCATCGTTGGTGG+TGG | + | chr1.2:46547559-46547578 | MS.gene034900:CDS | 45.0% |
| ! | ATAAGGTGCTACCTGCACAA+AGG | - | chr1.2:46548803-46548822 | None:intergenic | 45.0% |
| ! | ATTCAAAGGGCAGGTTGAAG+AGG | + | chr1.2:46550223-46550242 | MS.gene034900:CDS | 45.0% |
| ! | TTGACCGATTTCGGTGTAGA+AGG | + | chr1.2:46549618-46549637 | MS.gene034900:CDS | 45.0% |
| !! | AAAACTGGGTGTCGGGATAT+AGG | - | chr1.2:46550589-46550608 | None:intergenic | 45.0% |
| !! | AAACTGGGTGTCGGGATATA+GGG | - | chr1.2:46550588-46550607 | None:intergenic | 45.0% |
| !! | ATCGTTGTTGTTGGTGTTGG+AGG | + | chr1.2:46550182-46550201 | MS.gene034900:CDS | 45.0% |
| !! | CTATGTAGAAGGTTGGCCTA+AGG | - | chr1.2:46550627-46550646 | None:intergenic | 45.0% |
| !! | GTTGGTGACACAGTGCTATT+TGG | + | chr1.2:46550863-46550882 | MS.gene034900:CDS | 45.0% |
| !! | TGCCAGTGCTGTTCATTTTG+TGG | + | chr1.2:46550710-46550729 | MS.gene034900:intron | 45.0% |
| AGAGGAGAAGGGTGGAATCA+AGG | + | chr1.2:46550241-46550260 | MS.gene034900:CDS | 50.0% | |
| AGGTAAGCCTTGCTTAGAGC+AGG | - | chr1.2:46548832-46548851 | None:intergenic | 50.0% | |
| CAATTCTACGGCGACAACGT+TGG | + | chr1.2:46550845-46550864 | MS.gene034900:CDS | 50.0% | |
| CACAAATTCGCATGAGTGGG+AGG | - | chr1.2:46549865-46549884 | None:intergenic | 50.0% | |
| CACCTCTAATTCCGATGGAG+AGG | + | chr1.2:46550025-46550044 | MS.gene034900:CDS | 50.0% | |
| CACTTACTGCACCAAGGTTC+TGG | - | chr1.2:46549816-46549835 | None:intergenic | 50.0% | |
| CATACCTGTGTTGGAAGTGG+GGG | + | chr1.2:46549161-46549180 | MS.gene034900:CDS | 50.0% | |
| CCATACCTGTGTTGGAAGTG+GGG | + | chr1.2:46549160-46549179 | MS.gene034900:CDS | 50.0% | |
| CCCGCTCATTTGATCTGTCT+TGG | + | chr1.2:46550822-46550841 | MS.gene034900:CDS | 50.0% | |
| GAAACAGGGAGTTAAGCCTG+GGG | + | chr1.2:46548007-46548026 | MS.gene034900:CDS | 50.0% | |
| GTGAAACAGGGAGTTAAGCC+TGG | + | chr1.2:46548005-46548024 | MS.gene034900:CDS | 50.0% | |
| GTTGTTGGGGGAGGATACAT+TGG | + | chr1.2:46549735-46549754 | MS.gene034900:CDS | 50.0% | |
| TCGGGATATAGGGATCATGC+CGG | - | chr1.2:46550578-46550597 | None:intergenic | 50.0% | |
| TGGGAAAGCTGTGGTTGTTG+GGG | + | chr1.2:46549722-46549741 | MS.gene034900:CDS | 50.0% | |
| ! | ACTAAAGGACGGAAGGGTAC+TGG | + | chr1.2:46550151-46550170 | MS.gene034900:CDS | 50.0% |
| ! | CAGAACCTTGGTGCAGTAAG+TGG | + | chr1.2:46549814-46549833 | MS.gene034900:intron | 50.0% |
| ! | TGAACGTCCTGCTCTAAGCA+AGG | + | chr1.2:46548822-46548841 | MS.gene034900:CDS | 50.0% |
| ! | TTGCAACGGGCTCAACTGTA+AGG | + | chr1.2:46549497-46549516 | MS.gene034900:intron | 50.0% |
| !! | AAGAGCATTGCCTGCAGTCA+AGG | + | chr1.2:46551009-46551028 | MS.gene034900:CDS | 50.0% |
| !! | ATTGGTGCCTTTTTGGAGGG+CGG | + | chr1.2:46550950-46550969 | MS.gene034900:CDS | 50.0% |
| AAAGCTGTGGTTGTTGGGGG+AGG | + | chr1.2:46549726-46549745 | MS.gene034900:CDS | 55.0% | |
| AGGAGTTCCGCCCTCCAAAA+AGG | - | chr1.2:46550960-46550979 | None:intergenic | 55.0% | |
| ATGCGGCCATACCTCTCCAT+CGG | - | chr1.2:46550039-46550058 | None:intergenic | 55.0% | |
| CAGCTCCTGCTAGACTTCCT+GGG | + | chr1.2:46549135-46549154 | MS.gene034900:intron | 55.0% | |
| CCAACACAGGTATGGAACCC+AGG | - | chr1.2:46549155-46549174 | None:intergenic | 55.0% | |
| CCATGGTCTACCCAGAACCT+TGG | + | chr1.2:46549802-46549821 | MS.gene034900:CDS | 55.0% | |
| CCCCACTTCCAACACAGGTA+TGG | - | chr1.2:46549163-46549182 | None:intergenic | 55.0% | |
| CCTGGGTTCCATACCTGTGT+TGG | + | chr1.2:46549152-46549171 | MS.gene034900:CDS | 55.0% | |
| GATATGATTGCCAGCTCCCC+AGG | - | chr1.2:46548026-46548045 | None:intergenic | 55.0% | |
| GGGAAAGCTGTGGTTGTTGG+GGG | + | chr1.2:46549723-46549742 | MS.gene034900:CDS | 55.0% | |
| GGTATGGCCGCATGTGATCT+CGG | + | chr1.2:46550046-46550065 | MS.gene034900:intron | 55.0% | |
| TCCTGCCTCTGCTGCAATGA+TGG | - | chr1.2:46550762-46550781 | None:intergenic | 55.0% | |
| TGCTCGCAAATCAGCTGAGC+AGG | + | chr1.2:46550481-46550500 | MS.gene034900:CDS | 55.0% | |
| TGGAACCCAGGAAGTCTAGC+AGG | - | chr1.2:46549143-46549162 | None:intergenic | 55.0% | |
| TGGGGGAGGATACATTGGTC+TGG | + | chr1.2:46549740-46549759 | MS.gene034900:CDS | 55.0% | |
| TTCTCCCCCACTTCCAACAC+AGG | - | chr1.2:46549168-46549187 | None:intergenic | 55.0% | |
| ! | AGGGCAGGTTGAAGAGGAGA+AGG | + | chr1.2:46550229-46550248 | MS.gene034900:CDS | 55.0% |
| ! | CAGGTTGAAGAGGAGAAGGG+TGG | + | chr1.2:46550233-46550252 | MS.gene034900:CDS | 55.0% |
| ! | GGCTGAGCCTTGTGCAGTTA+TGG | + | chr1.2:46548746-46548765 | MS.gene034900:intron | 55.0% |
| ! | GGGCAGGTTGAAGAGGAGAA+GGG | + | chr1.2:46550230-46550249 | MS.gene034900:CDS | 55.0% |
| !! | CCAAGGTTCTGGGTAGACCA+TGG | - | chr1.2:46549805-46549824 | None:intergenic | 55.0% |
| ATCAGCTGAGCAGGCTGCGA+AGG | + | chr1.2:46550490-46550509 | MS.gene034900:CDS | 60.0% | |
| GCAGCTCCTGCTAGACTTCC+TGG | + | chr1.2:46549134-46549153 | MS.gene034900:intron | 60.0% | |
| GCAGGCCATCATTGCAGCAG+AGG | + | chr1.2:46550754-46550773 | MS.gene034900:intron | 60.0% | |
| GCCATCATTGCAGCAGAGGC+AGG | + | chr1.2:46550758-46550777 | MS.gene034900:CDS | 60.0% | |
| GGGAGTTAAGCCTGGGGAGC+TGG | + | chr1.2:46548013-46548032 | MS.gene034900:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 46547541 | 46551081 | 46547541 | ID=MS.gene034900 |
| chr1.2 | mRNA | 46547541 | 46551081 | 46547541 | ID=MS.gene034900.t1;Parent=MS.gene034900 |
| chr1.2 | exon | 46547541 | 46547591 | 46547541 | ID=MS.gene034900.t1.exon1;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46547541 | 46547591 | 46547541 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46547984 | 46548055 | 46547984 | ID=MS.gene034900.t1.exon2;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46547984 | 46548055 | 46547984 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46548811 | 46548862 | 46548811 | ID=MS.gene034900.t1.exon3;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46548811 | 46548862 | 46548811 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46549138 | 46549218 | 46549138 | ID=MS.gene034900.t1.exon4;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46549138 | 46549218 | 46549138 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46549395 | 46549513 | 46549395 | ID=MS.gene034900.t1.exon5;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46549395 | 46549513 | 46549395 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46549609 | 46549828 | 46549609 | ID=MS.gene034900.t1.exon6;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46549609 | 46549828 | 46549609 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46549928 | 46550046 | 46549928 | ID=MS.gene034900.t1.exon7;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46549928 | 46550046 | 46549928 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46550137 | 46550262 | 46550137 | ID=MS.gene034900.t1.exon8;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46550137 | 46550262 | 46550137 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46550371 | 46550511 | 46550371 | ID=MS.gene034900.t1.exon9;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46550371 | 46550511 | 46550371 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| chr1.2 | exon | 46550758 | 46551081 | 46550758 | ID=MS.gene034900.t1.exon10;Parent=MS.gene034900.t1 |
| chr1.2 | CDS | 46550758 | 46551081 | 46550758 | ID=cds.MS.gene034900.t1;Parent=MS.gene034900.t1 |
| Gene Sequence |
| Protein sequence |
