AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037995

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037995.t1 MTR_1g069000 98.545 481 7 0 1 481 1 481 0.0 977
MS.gene037995.t1 MTR_7g099830 64.770 457 103 10 1 444 1 412 0.0 555
MS.gene037995.t1 MTR_8g067090 48.039 102 53 0 7 108 13 114 1.32e-27 114
MS.gene037995.t1 MTR_8g471120 48.039 102 53 0 7 108 13 114 1.32e-27 114
MS.gene037995.t1 MTR_8g067080 44.762 105 58 0 7 111 13 117 3.05e-27 113
MS.gene037995.t1 MTR_8g067080 44.762 105 58 0 7 111 13 117 3.62e-27 113
MS.gene037995.t1 MTR_8g471110 44.762 105 58 0 7 111 13 117 3.62e-27 113
MS.gene037995.t1 MTR_2g030230 48.864 88 43 2 5 91 19 105 4.44e-21 94.4
MS.gene037995.t1 MTR_8g088320 46.739 92 47 2 1 91 6 96 6.66e-21 94.0
MS.gene037995.t1 MTR_2g080950 48.101 79 41 0 5 83 17 95 2.71e-20 94.0
MS.gene037995.t1 MTR_8g464390 48.101 79 41 0 5 83 17 95 9.69e-20 92.0
MS.gene037995.t1 MTR_6g080710 51.351 74 36 0 4 77 16 89 6.02e-19 87.0
MS.gene037995.t1 MTR_8g038400 48.718 78 39 1 5 81 18 95 1.56e-18 87.4
MS.gene037995.t1 MTR_3g017500 48.052 77 39 1 6 81 23 99 1.75e-17 84.3
MS.gene037995.t1 MTR_3g017500 48.052 77 39 1 6 81 53 129 2.95e-17 84.0
MS.gene037995.t1 MTR_4g074170 46.053 76 39 1 10 83 485 560 4.16e-15 78.6
MS.gene037995.t1 MTR_8g100100 48.571 70 34 1 10 77 500 569 2.15e-14 76.3
MS.gene037995.t1 MTR_8g100100 48.571 70 34 1 10 77 506 575 2.24e-14 76.3
MS.gene037995.t1 MTR_7g020860 45.333 75 39 1 10 82 508 582 1.02e-13 73.9
MS.gene037995.t1 MTR_7g020860 47.143 70 35 1 10 77 508 577 1.23e-13 73.9
MS.gene037995.t1 MTR_3g098680 44.286 70 37 1 10 77 503 572 5.40e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037995.t1 AT2G37550 61.789 492 141 8 1 481 1 456 0.0 553
MS.gene037995.t1 AT2G37550 61.789 492 141 8 1 481 1 456 0.0 553
MS.gene037995.t1 AT3G53710 61.647 498 135 13 1 481 1 459 0.0 540
MS.gene037995.t1 AT3G53710 61.647 498 135 13 1 481 1 459 0.0 540
MS.gene037995.t1 AT3G53710 61.647 498 135 13 1 481 1 459 0.0 540
MS.gene037995.t1 AT4G17890 48.571 105 54 0 7 111 16 120 1.31e-29 120
MS.gene037995.t1 AT4G17890 48.571 105 54 0 7 111 16 120 2.27e-29 119
MS.gene037995.t1 AT5G46750 48.571 105 54 0 7 111 13 117 6.84e-29 118
MS.gene037995.t1 AT2G35210 46.667 105 56 0 7 111 13 117 1.08e-27 114
MS.gene037995.t1 AT2G35210 46.667 105 56 0 7 111 13 117 2.80e-27 113
MS.gene037995.t1 AT4G05330 48.810 84 42 1 5 87 16 99 4.20e-22 97.4
MS.gene037995.t1 AT4G05330 48.810 84 42 1 5 87 16 99 4.20e-22 97.4
MS.gene037995.t1 AT5G54310 41.803 122 68 2 7 128 19 137 1.28e-21 97.8
MS.gene037995.t1 AT3G17660 52.703 74 35 0 4 77 16 89 2.67e-21 91.7
MS.gene037995.t1 AT3G17660 52.703 74 35 0 4 77 16 89 3.26e-21 92.8
MS.gene037995.t1 AT4G21160 47.727 88 44 2 5 91 16 102 4.29e-21 94.7
MS.gene037995.t1 AT4G21160 47.727 88 44 2 5 91 16 102 4.29e-21 94.7
MS.gene037995.t1 AT4G21160 47.727 88 44 2 5 91 16 102 4.29e-21 94.7
MS.gene037995.t1 AT4G21160 47.727 88 44 2 5 91 16 102 4.29e-21 94.7
MS.gene037995.t1 AT3G17660 52.703 74 35 0 4 77 16 89 8.84e-21 92.0
MS.gene037995.t1 AT3G07940 50.649 77 37 1 6 81 49 125 9.12e-20 89.7
MS.gene037995.t1 AT3G07940 50.649 77 37 1 6 81 49 125 3.32e-19 89.7
MS.gene037995.t1 AT1G60860 54.386 57 26 0 7 63 359 415 2.53e-15 79.0
MS.gene037995.t1 AT1G60860 54.386 57 26 0 7 63 470 526 2.60e-15 79.3
MS.gene037995.t1 AT1G60860 54.386 57 26 0 7 63 299 355 2.97e-15 79.0
MS.gene037995.t1 AT3G17660 50.000 58 29 0 4 61 16 73 3.74e-14 72.0
MS.gene037995.t1 AT5G13300 48.571 70 34 1 10 77 507 576 4.14e-14 75.5
MS.gene037995.t1 AT5G61980 45.714 70 36 1 15 82 509 578 1.09e-13 74.3
MS.gene037995.t1 AT1G10870 50.000 54 27 0 10 63 473 526 3.17e-13 72.8
MS.gene037995.t1 AT1G10870 50.000 54 27 0 10 63 473 526 3.32e-13 72.4

Find 170 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGATAGGGAAGGAGGTTC+GGG 0.309762 1.1:+50425618 MS.gene037995:CDS
AAGAAAGCTGCTGGACATAA+TGG 0.311171 1.1:+50427621 MS.gene037995:CDS
CACAAAAGAGATTACTTCTA+AGG 0.329121 1.1:+50426186 MS.gene037995:CDS
CTCAAACTCTTGGGACGATT+GGG 0.331416 1.1:+50427365 MS.gene037995:CDS
TGGCGGCATCACGGCGGCTC+CGG 0.342322 1.1:+50425166 MS.gene037995:CDS
TTGGGATAGGGAAGGAGGTT+CGG 0.345457 1.1:+50425617 MS.gene037995:CDS
ATCCCAGCTCTTGGGATGAT+TGG 0.345579 1.1:+50427469 MS.gene037995:CDS
ATGATGCTGGTTGGGCTGGC+TGG 0.346920 1.1:+50427547 MS.gene037995:CDS
TATTTATTCGCGGTCGCAAT+TGG 0.352308 1.1:+50425725 MS.gene037995:CDS
GCAGATCTTGTTGCCGGGTT+GGG 0.371767 1.1:-50425199 None:intergenic
CAAATTCGACTACTAATAAC+TGG 0.372531 1.1:+50427226 MS.gene037995:CDS
CCGGTTGTGAAGGAGAATTT+AGG 0.374910 1.1:+50425534 MS.gene037995:CDS
GGAGTTGATCCTTTATTAGT+AGG 0.375169 1.1:-50427414 None:intergenic
ATGATTCCGGCTGGGATGAT+TGG 0.384077 1.1:+50425598 MS.gene037995:CDS
TATTCATCTGGTGGGCAGTC+TGG 0.394756 1.1:+50427438 MS.gene037995:CDS
AGTTTATCGTGATCGGATTC+AGG 0.397292 1.1:+50425479 MS.gene037995:CDS
CTTCCTTCCTAGAATCTTTG+TGG 0.398078 1.1:-50427494 None:intergenic
AAGGGAGAACCTACTAATAA+AGG 0.401153 1.1:+50427405 MS.gene037995:CDS
GACTGCCCACCAGATGAATA+AGG 0.405430 1.1:-50427435 None:intergenic
TGATAGAAATGGCTACTATC+AGG 0.410799 1.1:+50427263 MS.gene037995:CDS
CGCAGATCTTGTTGCCGGGT+TGG 0.414757 1.1:-50425200 None:intergenic
TGTTGCCGGGTTGGGATTGA+AGG 0.414970 1.1:-50425191 None:intergenic
GCTCAAACTCTTGGGACGAT+TGG 0.416102 1.1:+50427364 MS.gene037995:CDS
ATTGGGACCACAAAGATTCT+AGG 0.416709 1.1:+50427487 MS.gene037995:CDS
CCACAATAATGATGCTGGTT+GGG 0.420450 1.1:+50427539 MS.gene037995:CDS
TCCCAGCTCTTGGGATGATT+GGG 0.422693 1.1:+50427470 MS.gene037995:CDS
GGCGGCATCACGGCGGCTCC+GGG 0.423745 1.1:+50425167 MS.gene037995:CDS
CGCCGATGGGGCAGAGTCGC+CGG 0.424686 1.1:+50425571 MS.gene037995:CDS
CGAAATGAGAATGATAGAAA+TGG 0.430727 1.1:+50427252 MS.gene037995:CDS
AAACTCAAAGCTCAAACTCT+TGG 0.431090 1.1:+50427355 MS.gene037995:CDS
AATAATGATGCTGGTTGGGC+TGG 0.431540 1.1:+50427543 MS.gene037995:CDS
TCGGTCGTGGCGTGATCCTC+CGG 0.431712 1.1:+50425515 MS.gene037995:CDS
TTCCTTCGGAATAGAATACT+TGG 0.434318 1.1:-50425418 None:intergenic
TGATTCCGGCTGGGATGATT+GGG 0.435890 1.1:+50425599 MS.gene037995:CDS
TACTATCAGGATTTCAATCA+AGG 0.437121 1.1:+50427276 MS.gene037995:CDS
CGCAAGGTGGGAAGTATGTT+GGG 0.437210 1.1:+50425829 MS.gene037995:CDS
TACTCACAATCCCAGCTCTT+GGG 0.438114 1.1:+50427461 MS.gene037995:CDS
GGATCAACTCCTTATTCATC+TGG 0.439382 1.1:+50427426 MS.gene037995:CDS
GGAAGAGAACAATCTTCATC+AGG 0.440220 1.1:+50427324 MS.gene037995:CDS
AAATCAGATGACGCTTGGAC+AGG 0.441545 1.1:+50427645 MS.gene037995:CDS
GGGGATTGGTAAGTTGTCAT+TGG 0.442974 1.1:+50426129 MS.gene037995:intron
AGAAAGCTGCTGGACATAAT+GGG 0.444118 1.1:+50427622 MS.gene037995:CDS
CCTAAATTCTCCTTCACAAC+CGG 0.446662 1.1:-50425534 None:intergenic
TCCGGAAAACACCGTGGTCT+CGG 0.447372 1.1:+50425291 MS.gene037995:CDS
AACTCAAAGCTCAAACTCTT+GGG 0.448408 1.1:+50427356 MS.gene037995:CDS
CATGGCTTTGGCTTCACAGA+AGG 0.454790 1.1:+50427179 MS.gene037995:CDS
TGCGACGGTGGAAGTCCTTC+CGG 0.458253 1.1:-50425810 None:intergenic
AAGGAGAATTTAGGTTCAAA+GGG 0.460070 1.1:+50425543 MS.gene037995:CDS
ATCGACGCAGATCTTGTTGC+CGG 0.461374 1.1:-50425205 None:intergenic
AAAGGAGGTAATTCTTCTAC+TGG 0.461732 1.1:+50427303 MS.gene037995:CDS
CGGATTCAGGCTTTGTCGGA+AGG 0.463866 1.1:+50425492 MS.gene037995:CDS
GTCCCAATCATCCCAAGAGC+TGG 0.464845 1.1:-50427472 None:intergenic
TGATCGGATTCAGGCTTTGT+CGG 0.466457 1.1:+50425488 MS.gene037995:CDS
GTAACAATATCCGTTTCCTT+CGG 0.466590 1.1:-50425432 None:intergenic
TTCAAAGGGAAGGCCGCCGA+TGG 0.468886 1.1:+50425557 MS.gene037995:CDS
TGGGGAGCCGATGCTTTAGC+TGG 0.469014 1.1:-50427519 None:intergenic
AATCAGATGACGCTTGGACA+GGG 0.470359 1.1:+50427646 MS.gene037995:CDS
TGATGCTGGTTGGGCTGGCT+GGG 0.473809 1.1:+50427548 MS.gene037995:CDS
GTACTCACAATCCCAGCTCT+TGG 0.474135 1.1:+50427460 MS.gene037995:CDS
CTGCTTCAGTTTATCGTGAT+CGG 0.474442 1.1:+50425472 MS.gene037995:CDS
GAAGGAGAATTTAGGTTCAA+AGG 0.482185 1.1:+50425542 MS.gene037995:CDS
AGCTTCTGCGGCGGGTAAAG+AGG 0.482654 1.1:+50425749 MS.gene037995:CDS
CAGAGATTGGTCAAAGGACA+TGG 0.483037 1.1:+50427139 MS.gene037995:CDS
CCCAACCAGCATCATTATTG+TGG 0.485486 1.1:-50427539 None:intergenic
TTTGAACGGCGGTGGTGCAC+CGG 0.486910 1.1:+50425680 MS.gene037995:CDS
AGCAGCGTTGGTGTTATACT+TGG 0.487190 1.1:-50425454 None:intergenic
ATTTAATTATCACAGGGGAT+TGG 0.494169 1.1:+50426115 MS.gene037995:intron
AGTCGCCGGAGTAATGATTC+CGG 0.494324 1.1:+50425585 MS.gene037995:CDS
AAGGACATGGGGTTTAATGA+AGG 0.494662 1.1:+50427152 MS.gene037995:CDS
TCAAAGGGAAGGCCGCCGAT+GGG 0.498527 1.1:+50425558 MS.gene037995:CDS
GATAGGGAAGGAGGTTCGGG+TGG 0.503166 1.1:+50425621 MS.gene037995:CDS
GCCGGAGTAATGATTCCGGC+TGG 0.503400 1.1:+50425589 MS.gene037995:CDS
GGTGGGAAGTATGTTGGGTT+CGG 0.503415 1.1:+50425834 MS.gene037995:CDS
GCTGCTAATGCTGTTCAGAC+TGG 0.505364 1.1:+50426163 MS.gene037995:CDS
GGAAGGCGGTTATGATCAAA+AGG 0.509923 1.1:+50427080 MS.gene037995:CDS
CGGGTTGGGATTGAAGGTCC+CGG 0.513419 1.1:-50425185 None:intergenic
TCGCAAGGTGGGAAGTATGT+TGG 0.513815 1.1:+50425828 MS.gene037995:CDS
GCATCTAATAAGAAAGCTGC+TGG 0.515421 1.1:+50427612 MS.gene037995:CDS
CCCACAATAATGATGCTGGT+TGG 0.515926 1.1:+50427538 MS.gene037995:CDS
GACTTCCACCGTCGCAAGGT+GGG 0.517045 1.1:+50425817 MS.gene037995:CDS
TTTGGCTTCACAGAAGGTTG+AGG 0.518131 1.1:+50427185 MS.gene037995:CDS
CAATTGGAAGCTTCTGCGGC+GGG 0.519075 1.1:+50425741 MS.gene037995:CDS
CTTTGTCGGAAGGTCGGTCG+TGG 0.519720 1.1:+50425502 MS.gene037995:CDS
CCAACCAGCATCATTATTGT+GGG 0.519854 1.1:-50427538 None:intergenic
ACTCAAAAGACATCAGAGAT+TGG 0.520352 1.1:+50427126 MS.gene037995:CDS
TTGCTCCTTTGTGAAGGCAT+CGG 0.521360 1.1:-50425864 None:intergenic
ATGGGAAATCAGATGACGCT+TGG 0.522747 1.1:+50427640 MS.gene037995:CDS
TGTGGATTGCTCCTTTGTGA+AGG 0.525196 1.1:-50425870 None:intergenic
GATCCGTCACCATGGATGCT+TGG 0.527744 1.1:+50425334 MS.gene037995:CDS
GATTTCGGACCAAGCATCCA+TGG 0.529426 1.1:-50425343 None:intergenic
CCGGCTGGGATGATTGGGAT+AGG 0.534746 1.1:+50425604 MS.gene037995:CDS
TCGACGCAGATCTTGTTGCC+GGG 0.535740 1.1:-50425204 None:intergenic
ACGATAAACTGAAGCAGCGT+TGG 0.536105 1.1:-50425466 None:intergenic
TTCAGGCTTTGTCGGAAGGT+CGG 0.544881 1.1:+50425496 MS.gene037995:CDS
CTCCGGCGACTCTGCCCCAT+CGG 0.545912 1.1:-50425573 None:intergenic
GCTCCCCACAATAATGATGC+TGG 0.546441 1.1:+50427534 MS.gene037995:CDS
TTTAGGAATTTGAACGGCGG+TGG 0.547735 1.1:+50425672 MS.gene037995:CDS
GTATTCTATTCCGAAGGAAA+CGG 0.550054 1.1:+50425422 MS.gene037995:CDS
GCTTCTGCGGCGGGTAAAGA+GGG 0.555155 1.1:+50425750 MS.gene037995:CDS
GCGTGATCCTCCGGTTGTGA+AGG 0.563730 1.1:+50425524 MS.gene037995:CDS
TCCGTCGACCTCGATCTCGC+CGG 0.565057 1.1:-50425699 None:intergenic
ATCAGATGACGCTTGGACAG+GGG 0.565298 1.1:+50427647 MS.gene037995:CDS
TGCCAAGTATTCTATTCCGA+AGG 0.565535 1.1:+50425416 MS.gene037995:CDS
TCTTTGTTTCAGGTCAAGGA+AGG 0.567944 1.1:+50427063 MS.gene037995:intron
TACTTCCCACCTTGCGACGG+TGG 0.568939 1.1:-50425822 None:intergenic
GGCGGAGAATGAGTCAAGGC+CGG 0.569646 1.1:+50425791 MS.gene037995:CDS
GTCGCAATTGGAAGCTTCTG+CGG 0.569797 1.1:+50425737 MS.gene037995:CDS
CAAAGGGAAGGCCGCCGATG+GGG 0.571024 1.1:+50425559 MS.gene037995:CDS
GATCATCCATGGCGGCATCA+CGG 0.576667 1.1:+50425157 None:intergenic
AGAATTTAGGTTCAAAGGGA+AGG 0.577046 1.1:+50425547 MS.gene037995:CDS
TCAACTCCTTATTCATCTGG+TGG 0.577122 1.1:+50427429 MS.gene037995:CDS
CGGCTGGGATGATTGGGATA+GGG 0.577559 1.1:+50425605 MS.gene037995:CDS
TCGGAATAGAATACTTGGCA+AGG 0.577709 1.1:-50425413 None:intergenic
TCCCAATCATCCCAAGAGCT+GGG 0.579490 1.1:-50427471 None:intergenic
TTCATGTGCTTAGAATGCTC+CGG 0.579995 1.1:+50425273 MS.gene037995:CDS
GAAGGACTTCCACCGTCGCA+AGG 0.582983 1.1:+50425813 MS.gene037995:CDS
GAGCCGCCGTGATGCCGCCA+TGG 0.583473 1.1:-50425163 None:intergenic
TGGGATAATGCAAAAGATGA+TGG 0.583815 1.1:+50427567 MS.gene037995:CDS
CCTATCCCAATCATCCCAGC+CGG 0.584873 1.1:-50425604 None:intergenic
CCGGAGTAATGATTCCGGCT+GGG 0.585313 1.1:+50425590 MS.gene037995:CDS
TCAGATGACGCTTGGACAGG+GGG 0.587832 1.1:+50427648 MS.gene037995:CDS
GAGGTTCGGGTGGTGATGTG+AGG 0.591884 1.1:+50425631 MS.gene037995:CDS
GATGTGAGGAGTAAGTCGAC+GGG 0.593326 1.1:+50425645 MS.gene037995:CDS
TCAAACTCTTGGGACGATTG+GGG 0.596473 1.1:+50427366 MS.gene037995:CDS
AGGACATGGGGTTTAATGAA+GGG 0.599160 1.1:+50427153 MS.gene037995:CDS
GTGGTGCACCGGCGAGATCG+AGG 0.600418 1.1:+50425691 MS.gene037995:CDS
CCCAGCCGGAATCATTACTC+CGG 0.606336 1.1:-50425590 None:intergenic
CAGTGGGCATCAGTCTCCTA+CGG 0.607011 1.1:+50425246 MS.gene037995:CDS
CTCTCAGAAGAATCCACAGT+GGG 0.607546 1.1:+50425230 MS.gene037995:CDS
GCAATTGGAAGCTTCTGCGG+CGG 0.607693 1.1:+50425740 MS.gene037995:CDS
CGGGACCTTCAATCCCAACC+CGG 0.609873 1.1:+50425186 MS.gene037995:CDS
AAGCATCCATGGTGACGGAT+CGG 0.610332 1.1:-50425332 None:intergenic
TTGTTTCAGGTCAAGGAAGG+CGG 0.612416 1.1:+50427066 MS.gene037995:intron
TTCAATCAAGGGAACAAAGG+AGG 0.615582 1.1:+50427288 MS.gene037995:CDS
AGAGATTGGTCAAAGGACAT+GGG 0.615964 1.1:+50427140 MS.gene037995:CDS
GGACATGGGGTTTAATGAAG+GGG 0.616409 1.1:+50427154 MS.gene037995:CDS
GATTTCAATCAAGGGAACAA+AGG 0.616794 1.1:+50427285 MS.gene037995:CDS
GGACCAAGCATCCATGGTGA+CGG 0.618778 1.1:-50425337 None:intergenic
CATGGTGACGGATCGGACGA+AGG 0.619426 1.1:-50425325 None:intergenic
CGGCGACTCTGCCCCATCGG+CGG 0.622822 1.1:-50425570 None:intergenic
TGATGTGAGGAGTAAGTCGA+CGG 0.623072 1.1:+50425644 MS.gene037995:CDS
GAGAATGAGTCAAGGCCGGA+AGG 0.624456 1.1:+50425795 MS.gene037995:CDS
CTTCGTCCGATCCGTCACCA+TGG 0.629444 1.1:+50425326 MS.gene037995:CDS
GGAAGAACCAGCTAAAGCAT+CGG 0.631170 1.1:+50427512 MS.gene037995:CDS
GGACTTCCACCGTCGCAAGG+TGG 0.631829 1.1:+50425816 MS.gene037995:CDS
ACATACTTCCCACCTTGCGA+CGG 0.631937 1.1:-50425825 None:intergenic
GATGATTGGGATAGGGAAGG+AGG 0.632481 1.1:+50425612 MS.gene037995:CDS
AGACATCAGAGATTGGTCAA+AGG 0.632664 1.1:+50427133 MS.gene037995:CDS
CAACTCCTTATTCATCTGGT+GGG 0.634524 1.1:+50427430 MS.gene037995:CDS
GGACCACAAAGATTCTAGGA+AGG 0.638994 1.1:+50427491 MS.gene037995:CDS
CGACGGAGGATATTTATTCG+CGG 0.642927 1.1:+50425715 MS.gene037995:CDS
ACTATCAGGATTTCAATCAA+GGG 0.645448 1.1:+50427277 MS.gene037995:CDS
GAGATTGGTCAAAGGACATG+GGG 0.646826 1.1:+50427141 MS.gene037995:CDS
GAAGAGAACAATCTTCATCA+GGG 0.647329 1.1:+50427325 MS.gene037995:CDS
GGCGAGATCGAGGTCGACGG+AGG 0.649649 1.1:+50425701 MS.gene037995:CDS
CAACCAGCATCATTATTGTG+GGG 0.653135 1.1:-50427537 None:intergenic
ACCGGCGAGATCGAGGTCGA+CGG 0.653631 1.1:+50425698 MS.gene037995:CDS
TGGGATGATTGGGATAGGGA+AGG 0.657232 1.1:+50425609 MS.gene037995:CDS
AGATGTGAACACCGAGACCA+CGG 0.664997 1.1:-50425302 None:intergenic
TAAGCACATGAAGATGCCGT+AGG 0.669663 1.1:-50425262 None:intergenic
AAATTCTCCTTCACAACCGG+AGG 0.674563 1.1:-50425531 None:intergenic
AGATGGCGGAGAATGAGTCA+AGG 0.685000 1.1:+50425787 MS.gene037995:CDS
CTAGTCCGATGCCTTCACAA+AGG 0.693188 1.1:+50425859 MS.gene037995:CDS
GACATGGGGTTTAATGAAGG+GGG 0.697882 1.1:+50427155 MS.gene037995:CDS
ATGTGAGGAGTAAGTCGACG+GGG 0.706562 1.1:+50425646 MS.gene037995:CDS
TAGGAGACTGATGCCCACTG+TGG 0.710667 1.1:-50425243 None:intergenic
CATCCATGGCGGCATCACGG+CGG 0.720125 1.1:+50425160 None:intergenic
GAATGCTCCGGAAAACACCG+TGG 0.731228 1.1:+50425285 MS.gene037995:CDS
TGTGAGGAGTAAGTCGACGG+GGG 0.747661 1.1:+50425647 MS.gene037995:CDS
GCTCTCAGAAGAATCCACAG+TGG 0.805841 1.1:+50425229 MS.gene037995:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAGAAAGAAAAAA+TGG - chr1.1:50427037-50427056 None:intergenic 10.0%
!! AAAAATTAGAAAGAAAAAAT+GGG - chr1.1:50427036-50427055 None:intergenic 10.0%
!! TATTGTATTTAATTATCACA+GGG + chr1.1:50426109-50426128 MS.gene037995:intron 15.0%
!! TTATTGTATTTAATTATCAC+AGG + chr1.1:50426108-50426127 MS.gene037995:intron 15.0%
!! AGCTAAAAAGAAATAAATGA+AGG + chr1.1:50426572-50426591 MS.gene037995:intron 20.0%
!! ATTGTATTTAATTATCACAG+GGG + chr1.1:50426110-50426129 MS.gene037995:intron 20.0%
!! GAAAATTTGTATTTGTTTCA+CGG + chr1.1:50426264-50426283 MS.gene037995:intron 20.0%
!! GCTAAAAAGAAATAAATGAA+GGG + chr1.1:50426573-50426592 MS.gene037995:intron 20.0%
!! TGAAAAGAAAAGAAACTAAT+TGG - chr1.1:50426902-50426921 None:intergenic 20.0%
!!! ATTTGGATTATTTTGTTCAT+GGG + chr1.1:50426210-50426229 MS.gene037995:intron 20.0%
!!! CATTTTTTTGATTTGGATTT+CGG - chr1.1:50425361-50425380 None:intergenic 20.0%
!!! CTTTTCATTTTTGCATTAAT+TGG + chr1.1:50426915-50426934 MS.gene037995:intron 20.0%
!!! TATTTGGATTATTTTGTTCA+TGG + chr1.1:50426209-50426228 MS.gene037995:intron 20.0%
!!! TGATTTTATTTCAATTGCAT+TGG - chr1.1:50426857-50426876 None:intergenic 20.0%
!!! TGTATTGATAATGTATTTGT+GGG + chr1.1:50426628-50426647 MS.gene037995:intron 20.0%
!!! TTCATTTATTTCTTTTTAGC+TGG - chr1.1:50426573-50426592 None:intergenic 20.0%
! CAACAAATTGAACTAATACA+TGG - chr1.1:50426313-50426332 None:intergenic 25.0%
! CGAAATCCAAATCAAAAAAA+TGG + chr1.1:50425359-50425378 MS.gene037995:CDS 25.0%
! TGACTGCATTAAAAAGATAA+CGG - chr1.1:50426534-50426553 None:intergenic 25.0%
! TGATTACATTCAATTACTAC+CGG + chr1.1:50426009-50426028 MS.gene037995:intron 25.0%
! TTGAATGTAATCAAATGTGT+CGG - chr1.1:50426002-50426021 None:intergenic 25.0%
!! CTATTTGATAACACTTATCT+CGG - chr1.1:50426424-50426443 None:intergenic 25.0%
!! GAAAAATAATCATTTTGCTG+TGG - chr1.1:50425891-50425910 None:intergenic 25.0%
!!! GGATTTGATAACTTTTATGA+AGG + chr1.1:50427588-50427607 MS.gene037995:CDS 25.0%
!!! GTGTATTGATAATGTATTTG+TGG + chr1.1:50426627-50426646 MS.gene037995:intron 25.0%
!!! TTATTTTTCTGTTGTTTCAC+AGG + chr1.1:50425902-50425921 MS.gene037995:CDS 25.0%
!!! TTTGGATTATTTTGTTCATG+GGG + chr1.1:50426211-50426230 MS.gene037995:intron 25.0%
!!! TTTTTTTTGCTCTTTGTTTC+AGG + chr1.1:50427053-50427072 MS.gene037995:intron 25.0%
ACTATCAGGATTTCAATCAA+GGG + chr1.1:50427277-50427296 MS.gene037995:CDS 30.0%
ATTTAATTATCACAGGGGAT+TGG + chr1.1:50426115-50426134 MS.gene037995:intron 30.0%
CAAATCAAAAAAATGGAAGC+TGG + chr1.1:50425366-50425385 MS.gene037995:CDS 30.0%
CAAATTCGACTACTAATAAC+TGG + chr1.1:50427226-50427245 MS.gene037995:CDS 30.0%
CACAAAAGAGATTACTTCTA+AGG + chr1.1:50426186-50426205 MS.gene037995:CDS 30.0%
CATGCTTTATAGTTGATTAG+TGG + chr1.1:50426062-50426081 MS.gene037995:intron 30.0%
CGAAATGAGAATGATAGAAA+TGG + chr1.1:50427252-50427271 MS.gene037995:CDS 30.0%
TACTATCAGGATTTCAATCA+AGG + chr1.1:50427276-50427295 MS.gene037995:CDS 30.0%
! AAGGAGAATTTAGGTTCAAA+GGG + chr1.1:50425543-50425562 MS.gene037995:CDS 30.0%
! TATGACTTTTAGCATAGTGT+GGG + chr1.1:50426788-50426807 MS.gene037995:intron 30.0%
! TTATGACTTTTAGCATAGTG+TGG + chr1.1:50426787-50426806 MS.gene037995:intron 30.0%
!! GAGATTACTTCTAAGGTATT+TGG + chr1.1:50426193-50426212 MS.gene037995:intron 30.0%
!! GGGAATTGATAATGTTAACT+TGG + chr1.1:50426648-50426667 MS.gene037995:intron 30.0%
!!! CAGCTTCCATTTTTTTGATT+TGG - chr1.1:50425368-50425387 None:intergenic 30.0%
AAACTCAAAGCTCAAACTCT+TGG + chr1.1:50427355-50427374 MS.gene037995:CDS 35.0%
AAAGGAGGTAATTCTTCTAC+TGG + chr1.1:50427303-50427322 MS.gene037995:CDS 35.0%
AACTCAAAGCTCAAACTCTT+GGG + chr1.1:50427356-50427375 MS.gene037995:CDS 35.0%
AAGGGAGAACCTACTAATAA+AGG + chr1.1:50427405-50427424 MS.gene037995:CDS 35.0%
ACAGTGGATGTTAATTGGAT+CGG + chr1.1:50426749-50426768 MS.gene037995:intron 35.0%
ACATGGTAGAAATATCCCTA+AGG - chr1.1:50426296-50426315 None:intergenic 35.0%
ACTCAAAAGACATCAGAGAT+TGG + chr1.1:50427126-50427145 MS.gene037995:CDS 35.0%
AGTCATATTCATATCTACGG+AGG - chr1.1:50425979-50425998 None:intergenic 35.0%
ATCAAAAAAATGGAAGCTGG+TGG + chr1.1:50425369-50425388 MS.gene037995:CDS 35.0%
CATGACTCGTAGAAAAACAA+AGG - chr1.1:50425947-50425966 None:intergenic 35.0%
CGGAGTCATATTCATATCTA+CGG - chr1.1:50425982-50426001 None:intergenic 35.0%
GAAGAGAACAATCTTCATCA+GGG + chr1.1:50427325-50427344 MS.gene037995:CDS 35.0%
GATTTCAATCAAGGGAACAA+AGG + chr1.1:50427285-50427304 MS.gene037995:CDS 35.0%
GTAACAATATCCGTTTCCTT+CGG - chr1.1:50425435-50425454 None:intergenic 35.0%
GTATTCTATTCCGAAGGAAA+CGG + chr1.1:50425422-50425441 MS.gene037995:CDS 35.0%
TCAGAACAGTGGATGTTAAT+TGG + chr1.1:50426744-50426763 MS.gene037995:intron 35.0%
TGATAGAAATGGCTACTATC+AGG + chr1.1:50427263-50427282 MS.gene037995:CDS 35.0%
TGATGTGTGATTGACAATAC+TGG + chr1.1:50426504-50426523 MS.gene037995:intron 35.0%
TGGGATAATGCAAAAGATGA+TGG + chr1.1:50427567-50427586 MS.gene037995:CDS 35.0%
TTCCTTCGGAATAGAATACT+TGG - chr1.1:50425421-50425440 None:intergenic 35.0%
! AGAATTTAGGTTCAAAGGGA+AGG + chr1.1:50425547-50425566 MS.gene037995:CDS 35.0%
! ATGACTTTTAGCATAGTGTG+GGG + chr1.1:50426789-50426808 MS.gene037995:intron 35.0%
! GAAGGAGAATTTAGGTTCAA+AGG + chr1.1:50425542-50425561 MS.gene037995:CDS 35.0%
! GGAGTTGATCCTTTATTAGT+AGG - chr1.1:50427417-50427436 None:intergenic 35.0%
!! GATTTTAGGAATTTGAACGG+CGG + chr1.1:50425669-50425688 MS.gene037995:CDS 35.0%
!! GCTTTTCATGGTATTTTTGC+TGG + chr1.1:50427009-50427028 MS.gene037995:intron 35.0%
!! GGGGATTTTAGGAATTTGAA+CGG + chr1.1:50425666-50425685 MS.gene037995:CDS 35.0%
!! TGCTAACTGTTTGCTTTTCA+TGG + chr1.1:50426997-50427016 MS.gene037995:intron 35.0%
!!! ATTTTTTGCGAAGAAGATGG+CGG + chr1.1:50425773-50425792 MS.gene037995:CDS 35.0%
!!! TAGCTGTTTTTCGAATTCCA+CGG - chr1.1:50426380-50426399 None:intergenic 35.0%
AAGAAAGCTGCTGGACATAA+TGG + chr1.1:50427621-50427640 MS.gene037995:CDS 40.0%
AAGGACATGGGGTTTAATGA+AGG + chr1.1:50427152-50427171 MS.gene037995:CDS 40.0%
AGAAAGCTGCTGGACATAAT+GGG + chr1.1:50427622-50427641 MS.gene037995:CDS 40.0%
AGCTGTTGAATGAGGTCAAT+AGG + chr1.1:50426820-50426839 MS.gene037995:intron 40.0%
AGGACATGGGGTTTAATGAA+GGG + chr1.1:50427153-50427172 MS.gene037995:CDS 40.0%
AGTACCTTCATGATTGTCTC+TGG + chr1.1:50426956-50426975 MS.gene037995:intron 40.0%
AGTTTATCGTGATCGGATTC+AGG + chr1.1:50425479-50425498 MS.gene037995:CDS 40.0%
ATTGGGACCACAAAGATTCT+AGG + chr1.1:50427487-50427506 MS.gene037995:CDS 40.0%
ATTGGGGCCAAAAAGATAGT+TGG + chr1.1:50427382-50427401 MS.gene037995:CDS 40.0%
CAACCAGCATCATTATTGTG+GGG - chr1.1:50427540-50427559 None:intergenic 40.0%
CAACTCCTTATTCATCTGGT+GGG + chr1.1:50427430-50427449 MS.gene037995:CDS 40.0%
CCAACCAGCATCATTATTGT+GGG - chr1.1:50427541-50427560 None:intergenic 40.0%
CCTAAATTCTCCTTCACAAC+CGG - chr1.1:50425537-50425556 None:intergenic 40.0%
CTAGTATGCTATAGCACTAC+AGG - chr1.1:50426454-50426473 None:intergenic 40.0%
CTGCTTCAGTTTATCGTGAT+CGG + chr1.1:50425472-50425491 MS.gene037995:CDS 40.0%
CTTCCTTCCTAGAATCTTTG+TGG - chr1.1:50427497-50427516 None:intergenic 40.0%
GCATCTAATAAGAAAGCTGC+TGG + chr1.1:50427612-50427631 MS.gene037995:CDS 40.0%
GCTATCTGATAACACTGTAG+TGG - chr1.1:50426349-50426368 None:intergenic 40.0%
GCTGTTGAATGAGGTCAATA+GGG + chr1.1:50426821-50426840 MS.gene037995:intron 40.0%
GGAAGAGAACAATCTTCATC+AGG + chr1.1:50427324-50427343 MS.gene037995:CDS 40.0%
GGATCAACTCCTTATTCATC+TGG + chr1.1:50427426-50427445 MS.gene037995:CDS 40.0%
GGCCAAAAAGATAGTTGGAA+GGG + chr1.1:50427387-50427406 MS.gene037995:CDS 40.0%
TAGAGGAAAGCTGTTGAATG+AGG + chr1.1:50426812-50426831 MS.gene037995:intron 40.0%
TATTTATTCGCGGTCGCAAT+TGG + chr1.1:50425725-50425744 MS.gene037995:CDS 40.0%
TCAACTCCTTATTCATCTGG+TGG + chr1.1:50427429-50427448 MS.gene037995:CDS 40.0%
TCGGAATAGAATACTTGGCA+AGG - chr1.1:50425416-50425435 None:intergenic 40.0%
TGCCAAGTATTCTATTCCGA+AGG + chr1.1:50425416-50425435 MS.gene037995:CDS 40.0%
TTCAATCAAGGGAACAAAGG+AGG + chr1.1:50427288-50427307 MS.gene037995:CDS 40.0%
TTCATGTGCTTAGAATGCTC+CGG + chr1.1:50425273-50425292 MS.gene037995:CDS 40.0%
! AGACATCAGAGATTGGTCAA+AGG + chr1.1:50427133-50427152 MS.gene037995:CDS 40.0%
! AGAGATTGGTCAAAGGACAT+GGG + chr1.1:50427140-50427159 MS.gene037995:CDS 40.0%
! CCACAATAATGATGCTGGTT+GGG + chr1.1:50427539-50427558 MS.gene037995:CDS 40.0%
! CTCCCTTCCAACTATCTTTT+TGG - chr1.1:50427392-50427411 None:intergenic 40.0%
! TCTTTGTTTCAGGTCAAGGA+AGG + chr1.1:50427063-50427082 MS.gene037995:intron 40.0%
! TTGCTCTTTGTTTCAGGTCA+AGG + chr1.1:50427059-50427078 MS.gene037995:intron 40.0%
!!! GGGATTTTTTGCGAAGAAGA+TGG + chr1.1:50425770-50425789 MS.gene037995:CDS 40.0%
AAATCAGATGACGCTTGGAC+AGG + chr1.1:50427645-50427664 MS.gene037995:CDS 45.0%
AAATTCTCCTTCACAACCGG+AGG - chr1.1:50425534-50425553 None:intergenic 45.0%
AATCAGATGACGCTTGGACA+GGG + chr1.1:50427646-50427665 MS.gene037995:CDS 45.0%
ACGATAAACTGAAGCAGCGT+TGG - chr1.1:50425469-50425488 None:intergenic 45.0%
ATGGGAAATCAGATGACGCT+TGG + chr1.1:50427640-50427659 MS.gene037995:CDS 45.0%
CCCAACCAGCATCATTATTG+TGG - chr1.1:50427542-50427561 None:intergenic 45.0%
CCCACAATAATGATGCTGGT+TGG + chr1.1:50427538-50427557 MS.gene037995:CDS 45.0%
CCGGTTGTGAAGGAGAATTT+AGG + chr1.1:50425534-50425553 MS.gene037995:CDS 45.0%
CGACGGAGGATATTTATTCG+CGG + chr1.1:50425715-50425734 MS.gene037995:CDS 45.0%
CTCAAACTCTTGGGACGATT+GGG + chr1.1:50427365-50427384 MS.gene037995:CDS 45.0%
CTCTCAGAAGAATCCACAGT+GGG + chr1.1:50425230-50425249 MS.gene037995:CDS 45.0%
GACATGGGGTTTAATGAAGG+GGG + chr1.1:50427155-50427174 MS.gene037995:CDS 45.0%
GGAAGAACCAGCTAAAGCAT+CGG + chr1.1:50427512-50427531 MS.gene037995:CDS 45.0%
GGAAGGCGGTTATGATCAAA+AGG + chr1.1:50427080-50427099 MS.gene037995:CDS 45.0%
GGACATGGGGTTTAATGAAG+GGG + chr1.1:50427154-50427173 MS.gene037995:CDS 45.0%
GGGCCAAAAAGATAGTTGGA+AGG + chr1.1:50427386-50427405 MS.gene037995:CDS 45.0%
GTTTCACGGAATGCACCTTA+GGG + chr1.1:50426278-50426297 MS.gene037995:intron 45.0%
TAAGCACATGAAGATGCCGT+AGG - chr1.1:50425265-50425284 None:intergenic 45.0%
TACTCACAATCCCAGCTCTT+GGG + chr1.1:50427461-50427480 MS.gene037995:CDS 45.0%
TAGCAGACGTATCTTGATGC+CGG - chr1.1:50426982-50427001 None:intergenic 45.0%
TCAAACTCTTGGGACGATTG+GGG + chr1.1:50427366-50427385 MS.gene037995:CDS 45.0%
TCAGATAGCTGATATAGCCG+TGG + chr1.1:50426360-50426379 MS.gene037995:intron 45.0%
TCTCGGCATATCACAAATCG+TGG - chr1.1:50426407-50426426 None:intergenic 45.0%
TGATGTGAGGAGTAAGTCGA+CGG + chr1.1:50425644-50425663 MS.gene037995:CDS 45.0%
TGTTTCACGGAATGCACCTT+AGG + chr1.1:50426277-50426296 MS.gene037995:intron 45.0%
TTTAGCATAGTGTGGGGTAG+AGG + chr1.1:50426795-50426814 MS.gene037995:intron 45.0%
TTTAGGAATTTGAACGGCGG+TGG + chr1.1:50425672-50425691 MS.gene037995:CDS 45.0%
! AATAATGATGCTGGTTGGGC+TGG + chr1.1:50427543-50427562 MS.gene037995:CDS 45.0%
! CAGAGATTGGTCAAAGGACA+TGG + chr1.1:50427139-50427158 MS.gene037995:CDS 45.0%
! GAGATTGGTCAAAGGACATG+GGG + chr1.1:50427141-50427160 MS.gene037995:CDS 45.0%
! GGACCACAAAGATTCTAGGA+AGG + chr1.1:50427491-50427510 MS.gene037995:CDS 45.0%
! GGGGATTGGTAAGTTGTCAT+TGG + chr1.1:50426129-50426148 MS.gene037995:intron 45.0%
! TGATCGGATTCAGGCTTTGT+CGG + chr1.1:50425488-50425507 MS.gene037995:CDS 45.0%
! TGTGGATTGCTCCTTTGTGA+AGG - chr1.1:50425873-50425892 None:intergenic 45.0%
! TTGCTCCTTTGTGAAGGCAT+CGG - chr1.1:50425867-50425886 None:intergenic 45.0%
! TTGTTTCAGGTCAAGGAAGG+CGG + chr1.1:50427066-50427085 MS.gene037995:intron 45.0%
! TTTGGCTTCACAGAAGGTTG+AGG + chr1.1:50427185-50427204 MS.gene037995:CDS 45.0%
!! AGCAGCGTTGGTGTTATACT+TGG - chr1.1:50425457-50425476 None:intergenic 45.0%
AATGAAGGGGGTCATGGCTT+TGG + chr1.1:50427167-50427186 MS.gene037995:CDS 50.0%
ACATACTTCCCACCTTGCGA+CGG - chr1.1:50425828-50425847 None:intergenic 50.0%
AGATGTGAACACCGAGACCA+CGG - chr1.1:50425305-50425324 None:intergenic 50.0%
AGTCGCCGGAGTAATGATTC+CGG + chr1.1:50425585-50425604 MS.gene037995:CDS 50.0%
ATCAGATGACGCTTGGACAG+GGG + chr1.1:50427647-50427666 MS.gene037995:CDS 50.0%
ATCCCAGCTCTTGGGATGAT+TGG + chr1.1:50427469-50427488 MS.gene037995:CDS 50.0%
ATCGACGCAGATCTTGTTGC+CGG - chr1.1:50425208-50425227 None:intergenic 50.0%
ATGATTCCGGCTGGGATGAT+TGG + chr1.1:50425598-50425617 MS.gene037995:CDS 50.0%
ATGTGAGGAGTAAGTCGACG+GGG + chr1.1:50425646-50425665 MS.gene037995:CDS 50.0%
CCTTCATGATTGTCTCTGGC+CGG + chr1.1:50426960-50426979 MS.gene037995:intron 50.0%
CTAGTCCGATGCCTTCACAA+AGG + chr1.1:50425859-50425878 MS.gene037995:CDS 50.0%
GACTGCCCACCAGATGAATA+AGG - chr1.1:50427438-50427457 None:intergenic 50.0%
GATGATTGGGATAGGGAAGG+AGG + chr1.1:50425612-50425631 MS.gene037995:CDS 50.0%
GATGTGAGGAGTAAGTCGAC+GGG + chr1.1:50425645-50425664 MS.gene037995:CDS 50.0%
GATTTCGGACCAAGCATCCA+TGG - chr1.1:50425346-50425365 None:intergenic 50.0%
GCTCAAACTCTTGGGACGAT+TGG + chr1.1:50427364-50427383 MS.gene037995:CDS 50.0%
GCTCCCCACAATAATGATGC+TGG + chr1.1:50427534-50427553 MS.gene037995:CDS 50.0%
GCTCTCAGAAGAATCCACAG+TGG + chr1.1:50425229-50425248 MS.gene037995:CDS 50.0%
GCTGCTAATGCTGTTCAGAC+TGG + chr1.1:50426163-50426182 MS.gene037995:CDS 50.0%
GGGTTTAATGAAGGGGGTCA+TGG + chr1.1:50427161-50427180 MS.gene037995:CDS 50.0%
GTACTCACAATCCCAGCTCT+TGG + chr1.1:50427460-50427479 MS.gene037995:CDS 50.0%
GTCGCAATTGGAAGCTTCTG+CGG + chr1.1:50425737-50425756 MS.gene037995:CDS 50.0%
TCCCAATCATCCCAAGAGCT+GGG - chr1.1:50427474-50427493 None:intergenic 50.0%
TCCCAGCTCTTGGGATGATT+GGG + chr1.1:50427470-50427489 MS.gene037995:CDS 50.0%
TGATTCCGGCTGGGATGATT+GGG + chr1.1:50425599-50425618 MS.gene037995:CDS 50.0%
TGGGATGATTGGGATAGGGA+AGG + chr1.1:50425609-50425628 MS.gene037995:CDS 50.0%
TTGGGATAGGGAAGGAGGTT+CGG + chr1.1:50425617-50425636 MS.gene037995:CDS 50.0%
! ATCCACTGTTCTGAGCAACG+AGG - chr1.1:50426738-50426757 None:intergenic 50.0%
! CGCAAGGTGGGAAGTATGTT+GGG + chr1.1:50425829-50425848 MS.gene037995:CDS 50.0%
! GGTGGGAAGTATGTTGGGTT+CGG + chr1.1:50425834-50425853 MS.gene037995:CDS 50.0%
! GTAAGTCGACGGGGGATTTT+AGG + chr1.1:50425655-50425674 MS.gene037995:CDS 50.0%
! TATTCATCTGGTGGGCAGTC+TGG + chr1.1:50427438-50427457 MS.gene037995:CDS 50.0%
! TCGCAAGGTGGGAAGTATGT+TGG + chr1.1:50425828-50425847 MS.gene037995:CDS 50.0%
! TTCAGGCTTTGTCGGAAGGT+CGG + chr1.1:50425496-50425515 MS.gene037995:CDS 50.0%
!! AAGCATCCATGGTGACGGAT+CGG - chr1.1:50425335-50425354 None:intergenic 50.0%
!! AGATGGCGGAGAATGAGTCA+AGG + chr1.1:50425787-50425806 MS.gene037995:CDS 50.0%
!! CATGGCTTTGGCTTCACAGA+AGG + chr1.1:50427179-50427198 MS.gene037995:CDS 50.0%
AGCATGCACACACACACACC+CGG - chr1.1:50426048-50426067 None:intergenic 55.0%
CAATTGGAAGCTTCTGCGGC+GGG + chr1.1:50425741-50425760 MS.gene037995:CDS 55.0%
CAGTGGGCATCAGTCTCCTA+CGG + chr1.1:50425246-50425265 MS.gene037995:CDS 55.0%
CCCAGCCGGAATCATTACTC+CGG - chr1.1:50425593-50425612 None:intergenic 55.0%
CCGGAGTAATGATTCCGGCT+GGG + chr1.1:50425590-50425609 MS.gene037995:CDS 55.0%
CCGGCCAGAGACAATCATGA+AGG - chr1.1:50426963-50426982 None:intergenic 55.0%
CCTATCCCAATCATCCCAGC+CGG - chr1.1:50425607-50425626 None:intergenic 55.0%
CGGCTGGGATGATTGGGATA+GGG + chr1.1:50425605-50425624 MS.gene037995:CDS 55.0%
GAATGCTCCGGAAAACACCG+TGG + chr1.1:50425285-50425304 MS.gene037995:CDS 55.0%
GAGAATGAGTCAAGGCCGGA+AGG + chr1.1:50425795-50425814 MS.gene037995:CDS 55.0%
GATCCGTCACCATGGATGCT+TGG + chr1.1:50425334-50425353 MS.gene037995:CDS 55.0%
GCAATTGGAAGCTTCTGCGG+CGG + chr1.1:50425740-50425759 MS.gene037995:CDS 55.0%
GCAGATCTTGTTGCCGGGTT+GGG - chr1.1:50425202-50425221 None:intergenic 55.0%
GGACCAAGCATCCATGGTGA+CGG - chr1.1:50425340-50425359 None:intergenic 55.0%
GTCCCAATCATCCCAAGAGC+TGG - chr1.1:50427475-50427494 None:intergenic 55.0%
TAGGAGACTGATGCCCACTG+TGG - chr1.1:50425246-50425265 None:intergenic 55.0%
TCAGATGACGCTTGGACAGG+GGG + chr1.1:50427648-50427667 MS.gene037995:CDS 55.0%
TCCGGAAAACACCGTGGTCT+CGG + chr1.1:50425291-50425310 MS.gene037995:CDS 55.0%
TCGACGCAGATCTTGTTGCC+GGG - chr1.1:50425207-50425226 None:intergenic 55.0%
TGCCTCGTTGCTCAGAACAG+TGG + chr1.1:50426733-50426752 MS.gene037995:intron 55.0%
TGGGATAGGGAAGGAGGTTC+GGG + chr1.1:50425618-50425637 MS.gene037995:CDS 55.0%
TGTGAGGAGTAAGTCGACGG+GGG + chr1.1:50425647-50425666 MS.gene037995:CDS 55.0%
! ACCGAGACCACGGTGTTTTC+CGG - chr1.1:50425295-50425314 None:intergenic 55.0%
! CGGATTCAGGCTTTGTCGGA+AGG + chr1.1:50425492-50425511 MS.gene037995:CDS 55.0%
! TACCGGTGTCAGTGTTGTGC+CGG + chr1.1:50426026-50426045 MS.gene037995:intron 55.0%
! TGTTGCCGGGTTGGGATTGA+AGG - chr1.1:50425194-50425213 None:intergenic 55.0%
ACCCGGCACAACACTGACAC+CGG - chr1.1:50426031-50426050 None:intergenic 60.0%
AGCTTCTGCGGCGGGTAAAG+AGG + chr1.1:50425749-50425768 MS.gene037995:CDS 60.0%
CCGGCTGGGATGATTGGGAT+AGG + chr1.1:50425604-50425623 MS.gene037995:CDS 60.0%
CGCAGATCTTGTTGCCGGGT+TGG - chr1.1:50425203-50425222 None:intergenic 60.0%
CGGGACCTTCAATCCCAACC+CGG + chr1.1:50425186-50425205 MS.gene037995:CDS 60.0%
CTTCGTCCGATCCGTCACCA+TGG + chr1.1:50425326-50425345 MS.gene037995:CDS 60.0%
CTTTGTCGGAAGGTCGGTCG+TGG + chr1.1:50425502-50425521 MS.gene037995:CDS 60.0%
GAAGGACTTCCACCGTCGCA+AGG + chr1.1:50425813-50425832 MS.gene037995:CDS 60.0%
GACTTCCACCGTCGCAAGGT+GGG + chr1.1:50425817-50425836 MS.gene037995:CDS 60.0%
GATAGGGAAGGAGGTTCGGG+TGG + chr1.1:50425621-50425640 MS.gene037995:CDS 60.0%
GCCGGAGTAATGATTCCGGC+TGG + chr1.1:50425589-50425608 MS.gene037995:CDS 60.0%
GCGTGATCCTCCGGTTGTGA+AGG + chr1.1:50425524-50425543 MS.gene037995:CDS 60.0%
GCTTCTGCGGCGGGTAAAGA+GGG + chr1.1:50425750-50425769 MS.gene037995:CDS 60.0%
GGCGGAGAATGAGTCAAGGC+CGG + chr1.1:50425791-50425810 MS.gene037995:CDS 60.0%
TACTTCCCACCTTGCGACGG+TGG - chr1.1:50425825-50425844 None:intergenic 60.0%
TCAAAGGGAAGGCCGCCGAT+GGG + chr1.1:50425558-50425577 MS.gene037995:CDS 60.0%
TGCGACGGTGGAAGTCCTTC+CGG - chr1.1:50425813-50425832 None:intergenic 60.0%
TGGGGAGCCGATGCTTTAGC+TGG - chr1.1:50427522-50427541 None:intergenic 60.0%
TTCAAAGGGAAGGCCGCCGA+TGG + chr1.1:50425557-50425576 MS.gene037995:CDS 60.0%
TTTGAACGGCGGTGGTGCAC+CGG + chr1.1:50425680-50425699 MS.gene037995:CDS 60.0%
! ACCGGTGTCAGTGTTGTGCC+GGG + chr1.1:50426027-50426046 MS.gene037995:intron 60.0%
! CGGGTTGGGATTGAAGGTCC+CGG - chr1.1:50425188-50425207 None:intergenic 60.0%
! GAGGTTCGGGTGGTGATGTG+AGG + chr1.1:50425631-50425650 MS.gene037995:CDS 60.0%
!! ATGATGCTGGTTGGGCTGGC+TGG + chr1.1:50427547-50427566 MS.gene037995:CDS 60.0%
!! CATGGTGACGGATCGGACGA+AGG - chr1.1:50425328-50425347 None:intergenic 60.0%
!! TGATGCTGGTTGGGCTGGCT+GGG + chr1.1:50427548-50427567 MS.gene037995:CDS 60.0%
ACCGGCGAGATCGAGGTCGA+CGG + chr1.1:50425698-50425717 MS.gene037995:CDS 65.0%
CAAAGGGAAGGCCGCCGATG+GGG + chr1.1:50425559-50425578 MS.gene037995:CDS 65.0%
GATGACGCTTGGACAGGGGG+TGG + chr1.1:50427651-50427670 MS.gene037995:CDS 65.0%
GGACTTCCACCGTCGCAAGG+TGG + chr1.1:50425816-50425835 MS.gene037995:CDS 65.0%
TCCGTCGACCTCGATCTCGC+CGG - chr1.1:50425702-50425721 None:intergenic 65.0%
TCGGTCGTGGCGTGATCCTC+CGG + chr1.1:50425515-50425534 MS.gene037995:CDS 65.0%
CTCCGGCGACTCTGCCCCAT+CGG - chr1.1:50425576-50425595 None:intergenic 70.0%
GGCGAGATCGAGGTCGACGG+AGG + chr1.1:50425701-50425720 MS.gene037995:CDS 70.0%
! GTGGTGCACCGGCGAGATCG+AGG + chr1.1:50425691-50425710 MS.gene037995:CDS 70.0%
CGCCGATGGGGCAGAGTCGC+CGG + chr1.1:50425571-50425590 MS.gene037995:CDS 75.0%
CGGCGACTCTGCCCCATCGG+CGG - chr1.1:50425573-50425592 None:intergenic 75.0%
TGGCGGCATCACGGCGGCTC+CGG + chr1.1:50425166-50425185 MS.gene037995:CDS 75.0%
! GGCGGCATCACGGCGGCTCC+GGG + chr1.1:50425167-50425186 MS.gene037995:CDS 80.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 50425165 50427683 50425165 ID=MS.gene037995
chr1.1 mRNA 50425165 50427683 50425165 ID=MS.gene037995.t1;Parent=MS.gene037995
chr1.1 exon 50425165 50425923 50425165 ID=MS.gene037995.t1.exon1;Parent=MS.gene037995.t1
chr1.1 CDS 50425165 50425923 50425165 ID=cds.MS.gene037995.t1;Parent=MS.gene037995.t1
chr1.1 exon 50426130 50426207 50426130 ID=MS.gene037995.t1.exon2;Parent=MS.gene037995.t1
chr1.1 CDS 50426130 50426207 50426130 ID=cds.MS.gene037995.t1;Parent=MS.gene037995.t1
chr1.1 exon 50427075 50427683 50427075 ID=MS.gene037995.t1.exon3;Parent=MS.gene037995.t1
chr1.1 CDS 50427075 50427683 50427075 ID=cds.MS.gene037995.t1;Parent=MS.gene037995.t1
Gene Sequence

>MS.gene037995

ATGGCGGCATCACGGCGGCTCCGGGACCTTCAATCCCAACCCGGCAACAAGATCTGCGTCGATTGCTCTCAGAAGAATCCACAGTGGGCATCAGTCTCCTACGGCATCTTCATGTGCTTAGAATGCTCCGGAAAACACCGTGGTCTCGGTGTTCACATCTCCTTCGTCCGATCCGTCACCATGGATGCTTGGTCCGAAATCCAAATCAAAAAAATGGAAGCTGGTGGTAATGACAATCTCAACGCTTTCCTTGCCAAGTATTCTATTCCGAAGGAAACGGATATTGTTACCAAGTATAACACCAACGCTGCTTCAGTTTATCGTGATCGGATTCAGGCTTTGTCGGAAGGTCGGTCGTGGCGTGATCCTCCGGTTGTGAAGGAGAATTTAGGTTCAAAGGGAAGGCCGCCGATGGGGCAGAGTCGCCGGAGTAATGATTCCGGCTGGGATGATTGGGATAGGGAAGGAGGTTCGGGTGGTGATGTGAGGAGTAAGTCGACGGGGGATTTTAGGAATTTGAACGGCGGTGGTGCACCGGCGAGATCGAGGTCGACGGAGGATATTTATTCGCGGTCGCAATTGGAAGCTTCTGCGGCGGGTAAAGAGGGATTTTTTGCGAAGAAGATGGCGGAGAATGAGTCAAGGCCGGAAGGACTTCCACCGTCGCAAGGTGGGAAGTATGTTGGGTTCGGATCTAGTCCGATGCCTTCACAAAGGAGCAATCCACAGCAAAATGATTATTTTTCTGTTGTTTCACAGGTGATTGAATTGTTTGAGTTCCTTTGTTTTTCTACGAGTCATGAATTGATTACCTCCGTAGATATGAATATGACTCCGACACATTTGATTACATTCAATTACTACCGGTGTCAGTGTTGTGCCGGGTGTGTGTGTGTGCATGCTTTATAGTTGATTAGTGGTCTGTGTTTGCTTATTTGTTTAATTATTGTATTTAATTATCACAGGGGATTGGTAAGTTGTCATTGGTTGCTGCATCTGCTGCTAATGCTGTTCAGACTGGCACAAAAGAGATTACTTCTAAGGTATTTGGATTATTTTGTTCATGGGGTGAGATGATTGTTATTGATATTTTGATGATGAAAATTTGTATTTGTTTCACGGAATGCACCTTAGGGATATTTCTACCATGTATTAGTTCAATTTGTTGCTTCTTCTATAGTCCACTACAGTGTTATCAGATAGCTGATATAGCCGTGGAATTCGAAAAACAGCTATTGTCCACGATTTGTGATATGCCGAGATAAGTGTTATCAAATAGACTACAGCCTGTAGTGCTATAGCATACTAGTAGAAGTTGAACAAATGTTTATGTCTGCTATGATGTGTGATTGACAATACTGGTTTACCGTTATCTTTTTAATGCAGTCATTCATTTGTCGCTTTGCCAGCTAAAAAGAAATAAATGAAGGGAGAAATGAGACAAAAATGAATGTTTTTCTTTGTGTATTGATAATGTATTTGTGGGAATTGATAATGTTAACTTGGCGTTTAAGAAGTGTGAATAAAATATTTGTTTTGTGTATAATTTTCATTTCTTCATTTAGTTTTGCCTCGTTGCTCAGAACAGTGGATGTTAATTGGATCGGAATTTTCAAATGTAGTTATGACTTTTAGCATAGTGTGGGGTAGAGGAAAGCTGTTGAATGAGGTCAATAGGGAACAAAGTGTCCAATGCAATTGAAATAAAATCATAAAACAATTTACATATCTCTTCCAATTAGTTTCTTTTCTTTTCATTTTTGCATTAATTGGTATATTAGTAAAATAAAAAGTACCTTCATGATTGTCTCTGGCCGGCATCAAGATACGTCTGCTAACTGTTTGCTTTTCATGGTATTTTTGCTGGTCCCATTTTTTCTTTCTAATTTTTTTTTTGCTCTTTGTTTCAGGTCAAGGAAGGCGGTTATGATCAAAAGGTCAACGAAACTGTCACTGTTGTCACTCAAAAGACATCAGAGATTGGTCAAAGGACATGGGGTTTAATGAAGGGGGTCATGGCTTTGGCTTCACAGAAGGTTGAGGAGTACGCTAAAGAAAACTCAAATTCGACTACTAATAACTGGCAACGAAATGAGAATGATAGAAATGGCTACTATCAGGATTTCAATCAAGGGAACAAAGGAGGTAATTCTTCTACTGGAAGAGAACAATCTTCATCAGGGCAATACAAAACTCAAAGCTCAAACTCTTGGGACGATTGGGGCCAAAAAGATAGTTGGAAGGGAGAACCTACTAATAAAGGATCAACTCCTTATTCATCTGGTGGGCAGTCTGGTACTCACAATCCCAGCTCTTGGGATGATTGGGACCACAAAGATTCTAGGAAGGAAGAACCAGCTAAAGCATCGGCTCCCCACAATAATGATGCTGGTTGGGCTGGCTGGGATAATGCAAAAGATGATGGATTTGATAACTTTTATGAAGGTGCATCTAATAAGAAAGCTGCTGGACATAATGGGAAATCAGATGACGCTTGGACAGGGGGTGGCTTCCTCTAA
Protein sequence

>MS.gene037995.t1

MAASRRLRDLQSQPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDAWSEIQIKKMEAGGNDNLNAFLAKYSIPKETDIVTKYNTNAASVYRDRIQALSEGRSWRDPPVVKENLGSKGRPPMGQSRRSNDSGWDDWDREGGSGGDVRSKSTGDFRNLNGGGAPARSRSTEDIYSRSQLEASAAGKEGFFAKKMAENESRPEGLPPSQGGKYVGFGSSPMPSQRSNPQQNDYFSVVSQGIGKLSLVAASAANAVQTGTKEITSKVKEGGYDQKVNETVTVVTQKTSEIGQRTWGLMKGVMALASQKVEEYAKENSNSTTNNWQRNENDRNGYYQDFNQGNKGGNSSTGREQSSSGQYKTQSSNSWDDWGQKDSWKGEPTNKGSTPYSSGGQSGTHNPSSWDDWDHKDSRKEEPAKASAPHNNDAGWAGWDNAKDDGFDNFYEGASNKKAAGHNGKSDDAWTGGGFL