Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41176.t1 | XP_013456116.1 | 97.8 | 447 | 10 | 0 | 1 | 447 | 1 | 447 | 3.50E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41176.t1 | Q94B55 | 63.2 | 454 | 154 | 3 | 1 | 443 | 1 | 452 | 7.6e-138 | 491.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41176.t1 | A0A072UKA7 | 97.8 | 447 | 10 | 0 | 1 | 447 | 1 | 447 | 2.5e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057669 | MS.gene41176 | 0.804335 | 2.27E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41176.t1 | MTR_4g063830 | 97.987 | 447 | 9 | 0 | 1 | 447 | 1 | 447 | 0.0 | 910 |
| MS.gene41176.t1 | MTR_2g096760 | 75.391 | 447 | 104 | 5 | 1 | 445 | 1 | 443 | 0.0 | 696 |
| MS.gene41176.t1 | MTR_4g021880 | 60.134 | 449 | 165 | 6 | 1 | 440 | 80 | 523 | 6.74e-180 | 513 |
| MS.gene41176.t1 | MTR_4g021880 | 60.651 | 338 | 126 | 3 | 1 | 331 | 80 | 417 | 7.67e-134 | 392 |
| MS.gene41176.t1 | MTR_0020s0130 | 33.499 | 403 | 206 | 13 | 1 | 372 | 1 | 372 | 7.54e-46 | 166 |
| MS.gene41176.t1 | MTR_1g100797 | 31.514 | 403 | 214 | 13 | 1 | 372 | 1 | 372 | 8.68e-41 | 152 |
| MS.gene41176.t1 | MTR_4g129470 | 30.612 | 392 | 217 | 9 | 6 | 372 | 11 | 372 | 2.07e-37 | 143 |
| MS.gene41176.t1 | MTR_4g129470 | 30.351 | 313 | 164 | 8 | 85 | 372 | 1 | 284 | 3.96e-24 | 104 |
| MS.gene41176.t1 | MTR_1g100797 | 29.801 | 302 | 160 | 11 | 81 | 372 | 9 | 268 | 9.14e-23 | 100 |
| MS.gene41176.t1 | MTR_1g115575 | 31.731 | 208 | 121 | 8 | 13 | 216 | 132 | 322 | 3.04e-16 | 81.6 |
| MS.gene41176.t1 | MTR_7g100390 | 29.665 | 209 | 128 | 5 | 11 | 216 | 48 | 240 | 1.48e-15 | 79.3 |
| MS.gene41176.t1 | MTR_7g117620 | 30.603 | 232 | 139 | 6 | 13 | 239 | 82 | 296 | 1.37e-14 | 76.3 |
| MS.gene41176.t1 | MTR_1g112830 | 26.383 | 235 | 153 | 5 | 1 | 232 | 124 | 341 | 3.52e-14 | 75.1 |
| MS.gene41176.t1 | MTR_2g096190 | 28.019 | 207 | 130 | 5 | 13 | 216 | 67 | 257 | 6.70e-14 | 73.9 |
| MS.gene41176.t1 | MTR_5g043640 | 31.818 | 220 | 130 | 4 | 13 | 229 | 20 | 222 | 9.11e-14 | 71.2 |
| MS.gene41176.t1 | MTR_4g062100 | 23.263 | 331 | 222 | 8 | 13 | 330 | 71 | 382 | 2.00e-12 | 69.3 |
| MS.gene41176.t1 | MTR_6g027840 | 29.000 | 200 | 126 | 4 | 51 | 250 | 181 | 364 | 1.61e-11 | 66.6 |
| MS.gene41176.t1 | MTR_7g115280 | 27.076 | 277 | 165 | 8 | 51 | 296 | 59 | 329 | 4.92e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41176.t1 | AT2G28840 | 68.053 | 457 | 132 | 5 | 1 | 446 | 1 | 454 | 0.0 | 629 |
| MS.gene41176.t1 | AT2G28840 | 70.207 | 386 | 102 | 4 | 72 | 446 | 57 | 440 | 0.0 | 554 |
| MS.gene41176.t1 | AT5G07270 | 31.707 | 410 | 229 | 10 | 1 | 388 | 1 | 381 | 4.28e-43 | 159 |
| MS.gene41176.t1 | AT5G57740 | 29.695 | 394 | 221 | 10 | 6 | 372 | 11 | 375 | 1.27e-31 | 127 |
| MS.gene41176.t1 | AT5G02620 | 27.381 | 336 | 200 | 12 | 11 | 328 | 55 | 364 | 2.02e-19 | 91.3 |
| MS.gene41176.t1 | AT5G02620 | 27.381 | 336 | 200 | 12 | 11 | 328 | 55 | 364 | 2.02e-19 | 91.3 |
| MS.gene41176.t1 | AT5G02620 | 27.381 | 336 | 200 | 12 | 11 | 328 | 55 | 364 | 2.02e-19 | 91.3 |
| MS.gene41176.t1 | AT5G60070 | 26.786 | 336 | 207 | 12 | 13 | 330 | 74 | 388 | 3.81e-18 | 87.4 |
| MS.gene41176.t1 | AT5G60070 | 29.187 | 209 | 127 | 4 | 16 | 216 | 36 | 231 | 8.69e-13 | 70.9 |
| MS.gene41176.t1 | AT5G02620 | 30.583 | 206 | 122 | 5 | 11 | 212 | 55 | 243 | 8.32e-18 | 86.3 |
| MS.gene41176.t1 | AT5G02620 | 30.583 | 206 | 122 | 5 | 11 | 212 | 55 | 243 | 8.32e-18 | 86.3 |
| MS.gene41176.t1 | AT3G12360 | 31.674 | 221 | 127 | 10 | 13 | 226 | 130 | 333 | 1.70e-15 | 79.3 |
| MS.gene41176.t1 | AT3G12360 | 31.674 | 221 | 127 | 10 | 13 | 226 | 118 | 321 | 2.04e-15 | 79.0 |
| MS.gene41176.t1 | AT1G07710 | 26.409 | 337 | 207 | 12 | 11 | 330 | 65 | 377 | 6.34e-15 | 77.4 |
| MS.gene41176.t1 | AT1G07710 | 26.409 | 337 | 207 | 12 | 11 | 330 | 65 | 377 | 6.34e-15 | 77.4 |
| MS.gene41176.t1 | AT5G20350 | 26.613 | 248 | 159 | 6 | 7 | 248 | 22 | 252 | 2.41e-14 | 75.9 |
| MS.gene41176.t1 | AT3G04710 | 32.093 | 215 | 103 | 6 | 51 | 236 | 59 | 259 | 2.50e-14 | 75.1 |
| MS.gene41176.t1 | AT3G04710 | 32.093 | 215 | 103 | 6 | 51 | 236 | 283 | 483 | 3.71e-14 | 75.1 |
| MS.gene41176.t1 | AT3G04710 | 28.625 | 269 | 137 | 7 | 51 | 290 | 59 | 301 | 2.06e-13 | 72.4 |
| MS.gene41176.t1 | AT5G13530 | 25.592 | 211 | 133 | 5 | 16 | 216 | 472 | 668 | 1.73e-12 | 70.5 |
| MS.gene41176.t1 | AT5G13530 | 25.592 | 211 | 133 | 5 | 16 | 216 | 472 | 668 | 1.73e-12 | 70.5 |
| MS.gene41176.t1 | AT2G31820 | 26.749 | 243 | 162 | 6 | 13 | 253 | 190 | 418 | 2.96e-12 | 69.3 |
| MS.gene41176.t1 | AT3G24530 | 32.895 | 152 | 88 | 4 | 23 | 169 | 26 | 168 | 5.57e-12 | 68.2 |
Find 106 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTAGAGCAGGCCTTAT+TGG | 0.254482 | 4.1:-36674680 | MS.gene41176:CDS |
| CTAGTCCCGTGGCTGCTTCT+TGG | 0.292776 | 4.1:-36675856 | MS.gene41176:intron |
| AAAATGAGCGGCCGTAGTTC+CGG | 0.300237 | 4.1:-36673519 | MS.gene41176:CDS |
| TGTGCTTCAACTAGCAGATA+TGG | 0.305279 | 4.1:-36675604 | MS.gene41176:CDS |
| TTCCCTGTTCGCGTCCAATA+AGG | 0.329855 | 4.1:+36674666 | None:intergenic |
| CGTCTCCAACGTGATGCATC+TGG | 0.332475 | 4.1:-36675393 | MS.gene41176:CDS |
| TGGTCATTCTTCTTGCCTTA+AGG | 0.368140 | 4.1:-36675900 | MS.gene41176:CDS |
| AGGCCTTATTGGACGCGAAC+AGG | 0.370869 | 4.1:-36674669 | MS.gene41176:CDS |
| TGTGGAGATGGAAGAGAGTA+AGG | 0.374735 | 4.1:+36674616 | None:intergenic |
| AAATGAGCGGCCGTAGTTCC+GGG | 0.375798 | 4.1:-36673518 | MS.gene41176:CDS |
| CGAAATTTCCTTGATTTGCT+TGG | 0.378282 | 4.1:+36673603 | None:intergenic |
| TTGCATTATGCTGCTTACTA+TGG | 0.392266 | 4.1:-36675920 | MS.gene41176:CDS |
| TACTTCAAAGCAACCACATA+TGG | 0.395193 | 4.1:+36674808 | None:intergenic |
| AACAGAATGTGCACACATTC+AGG | 0.420204 | 4.1:+36675646 | None:intergenic |
| CATCTGCACAGCCTCTTGTA+TGG | 0.420700 | 4.1:-36674750 | MS.gene41176:CDS |
| TTGTCCAATGTAAATTCATT+CGG | 0.426931 | 4.1:-36673543 | MS.gene41176:CDS |
| CCTCTTCATTTAGCAGCTAA+AGG | 0.427567 | 4.1:-36675462 | MS.gene41176:CDS |
| CTGATTATCTTCAATGATGA+TGG | 0.429013 | 4.1:+36674727 | None:intergenic |
| GATAACCATCAGTCTAGATA+TGG | 0.443015 | 4.1:+36673683 | None:intergenic |
| GGGTAGCAGCAGCAGTTTCA+AGG | 0.445286 | 4.1:-36673568 | MS.gene41176:CDS |
| AGGTGCTACACCATTGCATC+TGG | 0.451079 | 4.1:-36675686 | MS.gene41176:CDS |
| TGATTGCTTCCGAAAATGAA+TGG | 0.451396 | 4.1:-36673494 | MS.gene41176:CDS |
| ACATCTGGTGGCCACAGTCT+TGG | 0.456216 | 4.1:+36673799 | None:intergenic |
| TCTAATAAAACTTTAGCCTC+TGG | 0.458151 | 4.1:+36674694 | None:intergenic |
| TGCTATATTTGCAGATGTCC+TGG | 0.458321 | 4.1:-36675492 | MS.gene41176:intron |
| ATCTAGACTGATGGTTATCA+AGG | 0.463010 | 4.1:-36673679 | MS.gene41176:CDS |
| GTGTGCATTGTGCACACATC+TGG | 0.471356 | 4.1:+36673784 | None:intergenic |
| GTTTCAAGCCAAGCAAATCA+AGG | 0.478084 | 4.1:-36673611 | MS.gene41176:CDS |
| GTGCTTCAACTAGCAGATAT+GGG | 0.478560 | 4.1:-36675603 | MS.gene41176:intron |
| CTTCATATTGCTGCTGCCAA+TGG | 0.485862 | 4.1:-36676596 | MS.gene41176:CDS |
| TATTGGACGCGAACAGGGAA+AGG | 0.487813 | 4.1:-36674663 | MS.gene41176:CDS |
| TGCTGCCAATGGTCAGATCC+AGG | 0.493489 | 4.1:-36676585 | MS.gene41176:intron |
| TGCATTGCTGCCAACATAAG+TGG | 0.493653 | 4.1:+36676119 | None:intergenic |
| CAGCAGAAAGTATTGCCTTA+AGG | 0.496959 | 4.1:+36675885 | None:intergenic |
| GATATGGCGCTTCGACAGAA+TGG | 0.498200 | 4.1:+36673699 | None:intergenic |
| GGTAGCAGCAGCAGTTTCAA+GGG | 0.499150 | 4.1:-36673567 | MS.gene41176:CDS |
| GCTATATTTGCAGATGTCCT+GGG | 0.514636 | 4.1:-36675491 | MS.gene41176:intron |
| CATCCGCGAATTATTAGCAT+GGG | 0.514704 | 4.1:-36675424 | MS.gene41176:CDS |
| CTCTTTCGTGCTGTTCAACA+TGG | 0.515412 | 4.1:-36676701 | MS.gene41176:CDS |
| TGTGTTGAATCGACAAAAGC+AGG | 0.516759 | 4.1:-36676281 | MS.gene41176:intron |
| ATCTCCACACTCTGATCGAA+TGG | 0.518796 | 4.1:-36674602 | MS.gene41176:CDS |
| ATGCAGGCGGATACCATATG+TGG | 0.519878 | 4.1:-36674821 | MS.gene41176:intron |
| GTCTCCAACGTGATGCATCT+GGG | 0.525701 | 4.1:-36675392 | MS.gene41176:intron |
| AATGGACAGATGGGTGGGGT+GGG | 0.525799 | 4.1:+36673717 | None:intergenic |
| ATGCTGCATCTGCTTTGAGC+AGG | 0.528277 | 4.1:-36673838 | MS.gene41176:CDS |
| GACAGAATGGACAGATGGGT+GGG | 0.529180 | 4.1:+36673712 | None:intergenic |
| CACCCCATGCTAATAATTCG+CGG | 0.532650 | 4.1:+36675421 | None:intergenic |
| ATTCGATCAGAGTGTGGAGA+TGG | 0.534607 | 4.1:+36674604 | None:intergenic |
| GAATGGACAGATGGGTGGGG+TGG | 0.536558 | 4.1:+36673716 | None:intergenic |
| GTAGTACGATTGAGAAGAGA+AGG | 0.541763 | 4.1:+36676641 | None:intergenic |
| AATTCAGACCCCACTTATGT+TGG | 0.543384 | 4.1:-36676129 | MS.gene41176:intron |
| CTTATGTTGGCAGCAATGCA+TGG | 0.544992 | 4.1:-36676116 | MS.gene41176:CDS |
| CAAAGTGGTCTTAGTTGTAG+AGG | 0.545298 | 4.1:-36676740 | MS.gene41176:CDS |
| CCTTTAGCTGCTAAATGAAG+AGG | 0.547668 | 4.1:+36675462 | None:intergenic |
| GACTAACCAAGAAGCAGCCA+CGG | 0.550497 | 4.1:+36675850 | None:intergenic |
| GATTGCTTCCGAAAATGAAT+GGG | 0.551989 | 4.1:-36673493 | MS.gene41176:CDS |
| GCATTGCTGCCAACATAAGT+GGG | 0.556318 | 4.1:+36676120 | None:intergenic |
| TATATTGCAGGGGCTTTGCA+CGG | 0.559470 | 4.1:-36675732 | MS.gene41176:intron |
| AAGCAATCATCCCGGAACTA+CGG | 0.559960 | 4.1:+36673508 | None:intergenic |
| GGCCTTATTGGACGCGAACA+GGG | 0.567914 | 4.1:-36674668 | MS.gene41176:CDS |
| GTGAATATTAGAGACGGTAG+AGG | 0.570533 | 4.1:-36675706 | MS.gene41176:CDS |
| GTGGAAAAGTTGCTTGAAGC+TGG | 0.573507 | 4.1:-36676080 | MS.gene41176:CDS |
| ATTGGACGCGAACAGGGAAA+GGG | 0.577168 | 4.1:-36674662 | MS.gene41176:CDS |
| TTAATGTTTGATGTGTGTCA+TGG | 0.578777 | 4.1:-36675953 | MS.gene41176:CDS |
| GCTTCGACAGAATGGACAGA+TGG | 0.579479 | 4.1:+36673707 | None:intergenic |
| ACAGAATGGACAGATGGGTG+GGG | 0.584465 | 4.1:+36673713 | None:intergenic |
| TTGAACCTGGATCTGACCAT+TGG | 0.585236 | 4.1:+36676580 | None:intergenic |
| GGTAGAAACTCACGAAGACA+TGG | 0.587372 | 4.1:-36673658 | MS.gene41176:CDS |
| TGGCAGCAGCAATATGAAGA+GGG | 0.588977 | 4.1:+36676600 | None:intergenic |
| CGACAGAATGGACAGATGGG+TGG | 0.592181 | 4.1:+36673711 | None:intergenic |
| ATCTGGCAGCTCGTCAAAGA+CGG | 0.594811 | 4.1:-36675669 | MS.gene41176:CDS |
| TGACGAGCTGCCAGATGCAA+TGG | 0.602034 | 4.1:+36675676 | None:intergenic |
| GTGCACATTCTGTTGTGTAG+TGG | 0.607255 | 4.1:-36675637 | MS.gene41176:CDS |
| AATGATGATGGCCATACAAG+AGG | 0.608678 | 4.1:+36674739 | None:intergenic |
| TGCTGCTCAATCTAGTCCCG+TGG | 0.608978 | 4.1:-36675867 | MS.gene41176:CDS |
| GCATGGAAAGATTGAATGTG+TGG | 0.610223 | 4.1:-36676099 | MS.gene41176:CDS |
| GCATCCGCGAATTATTAGCA+TGG | 0.610332 | 4.1:-36675425 | MS.gene41176:CDS |
| TAATTATCAGGTTAGCGAGA+CGG | 0.611739 | 4.1:-36673865 | MS.gene41176:intron |
| AAGCGCCATATCTAGACTGA+TGG | 0.612134 | 4.1:-36673688 | MS.gene41176:CDS |
| CGAATTATTAGCATGGGGTG+CGG | 0.613204 | 4.1:-36675418 | MS.gene41176:CDS |
| GGGATGCGAAGTTGAAGTGT+TGG | 0.613230 | 4.1:+36673737 | None:intergenic |
| CTTCATTTAGCAGCTAAAGG+AGG | 0.613756 | 4.1:-36675459 | MS.gene41176:CDS |
| AAATGAAGAGGAGTACTCCC+AGG | 0.616255 | 4.1:+36675474 | None:intergenic |
| CTTCGACAGAATGGACAGAT+GGG | 0.616676 | 4.1:+36673708 | None:intergenic |
| TTGGCAGCAGCAATATGAAG+AGG | 0.619663 | 4.1:+36676599 | None:intergenic |
| ACTAACCAAGAAGCAGCCAC+GGG | 0.627620 | 4.1:+36675851 | None:intergenic |
| AACACTCTGCTGTCACAACA+AGG | 0.631175 | 4.1:-36673760 | MS.gene41176:CDS |
| TGTAGAGGTAGTCATGAACA+TGG | 0.643863 | 4.1:-36676725 | MS.gene41176:CDS |
| CGGTTTGTGAATATTAGAGA+CGG | 0.645981 | 4.1:-36675712 | MS.gene41176:CDS |
| TCATCCATTCGATCAGAGTG+TGG | 0.646169 | 4.1:+36674598 | None:intergenic |
| TGCATTGTGCACACATCTGG+TGG | 0.649232 | 4.1:+36673787 | None:intergenic |
| AACAGGTGTCGACATCATTG+TGG | 0.652268 | 4.1:+36673459 | None:intergenic |
| TAGTACGATTGAGAAGAGAA+GGG | 0.656985 | 4.1:+36676642 | None:intergenic |
| TGGAGAAGGATGGGTCAAAG+TGG | 0.658025 | 4.1:-36676755 | None:intergenic |
| AATCAGTGAACTTAATCCAG+AGG | 0.659408 | 4.1:-36674710 | MS.gene41176:CDS |
| GGCAGCAGCAATATGAAGAG+GGG | 0.664522 | 4.1:+36676601 | None:intergenic |
| CACGAAGACATGGATCTAGA+CGG | 0.665249 | 4.1:-36673648 | MS.gene41176:CDS |
| TTTGCTTGGCTTGAAACAAG+TGG | 0.668168 | 4.1:+36673617 | None:intergenic |
| TGTACCCAGATGCATCACGT+TGG | 0.686205 | 4.1:+36675388 | None:intergenic |
| ATCCGCGAATTATTAGCATG+GGG | 0.692205 | 4.1:-36675423 | MS.gene41176:CDS |
| GTTGCTTTGAAGTACAAACA+TGG | 0.699828 | 4.1:-36674799 | MS.gene41176:CDS |
| AAATTTCGTAACATGAACGA+GGG | 0.699839 | 4.1:-36673588 | MS.gene41176:CDS |
| GAAATTTCGTAACATGAACG+AGG | 0.700659 | 4.1:-36673589 | MS.gene41176:CDS |
| CATTGCTGCCAACATAAGTG+GGG | 0.709787 | 4.1:+36676121 | None:intergenic |
| AATGGATGACAATATCTCTG+AGG | 0.711499 | 4.1:-36674584 | MS.gene41176:intron |
| ACAATTGAAGTCCAAGACTG+TGG | 0.711764 | 4.1:-36673810 | MS.gene41176:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTATGAAAAATTATC+AGG | - | chr4.1:36674241-36674260 | MS.gene41176:intron | 10.0% |
| !! | TATAAATTTAATAAGTTTGT+AGG | + | chr4.1:36675750-36675769 | None:intergenic | 10.0% |
| !!! | AATTTGATTTTTTTTTTTGT+TGG | - | chr4.1:36673867-36673886 | MS.gene41176:intron | 10.0% |
| !!! | ATTTGATTTTTTTTTTTGTT+GGG | - | chr4.1:36673868-36673887 | MS.gene41176:intron | 10.0% |
| !!! | GATTATATTTTTCAAATTAT+AGG | + | chr4.1:36675192-36675211 | None:intergenic | 10.0% |
| !!! | TATCTTTAATTGTATTTTTT+TGG | - | chr4.1:36674064-36674083 | MS.gene41176:intron | 10.0% |
| !! | AAACTTATTAAATTTATAGC+AGG | - | chr4.1:36675752-36675771 | MS.gene41176:intron | 15.0% |
| !! | TAATATGTAAACCTATTATT+TGG | - | chr4.1:36675123-36675142 | MS.gene41176:intron | 15.0% |
| !! | TCATAAAATTGAAATAAACA+TGG | + | chr4.1:36674189-36674208 | None:intergenic | 15.0% |
| !!! | AAAAATATAATCACTTGTTT+TGG | - | chr4.1:36675200-36675219 | MS.gene41176:intron | 15.0% |
| !!! | CTAATTATTTGGATATTTTT+CGG | - | chr4.1:36675779-36675798 | MS.gene41176:intron | 15.0% |
| !!! | GATTTTAAAACATTTAACAA+TGG | - | chr4.1:36674452-36674471 | MS.gene41176:intron | 15.0% |
| !!! | TATGAATTTTGATTTGAATT+TGG | - | chr4.1:36673977-36673996 | MS.gene41176:intron | 15.0% |
| !! | AAAATTGAAATAAACATGGA+GGG | + | chr4.1:36674185-36674204 | None:intergenic | 20.0% |
| !! | AAGAATACAATTATATTGCA+GGG | - | chr4.1:36674476-36674495 | MS.gene41176:intron | 20.0% |
| !! | ATTAAAATGAAAAACCCAAT+TGG | + | chr4.1:36673808-36673827 | None:intergenic | 20.0% |
| !! | TAAAATTGAAATAAACATGG+AGG | + | chr4.1:36674186-36674205 | None:intergenic | 20.0% |
| !! | TCATTAATTTCTTTCCTAAT+TGG | - | chr4.1:36674405-36674424 | MS.gene41176:intron | 20.0% |
| !! | TTAAAATGAAAAACCCAATT+GGG | + | chr4.1:36673807-36673826 | None:intergenic | 20.0% |
| !! | TTTAACTGATCAAAATTAGA+AGG | + | chr4.1:36675846-36675865 | None:intergenic | 20.0% |
| !!! | GATTTGAATTTGGATTTTAA+TGG | - | chr4.1:36673987-36674006 | MS.gene41176:intron | 20.0% |
| !!! | GGTTTTTCATTTTAATTTCT+GGG | - | chr4.1:36673812-36673831 | MS.gene41176:CDS | 20.0% |
| !!! | TGTTTGCTATTTTTCAATTT+AGG | - | chr4.1:36675245-36675264 | MS.gene41176:intron | 20.0% |
| ! | AACACGAAAAAAGAATGTAA+AGG | + | chr4.1:36673672-36673691 | None:intergenic | 25.0% |
| ! | AAGTAGTAAATTCAAATGGT+TGG | + | chr4.1:36675686-36675705 | None:intergenic | 25.0% |
| ! | AATTAATGACAAAACCGAAA+AGG | + | chr4.1:36674394-36674413 | None:intergenic | 25.0% |
| ! | ACACGAAAAAAGAATGTAAA+GGG | + | chr4.1:36673671-36673690 | None:intergenic | 25.0% |
| ! | ACTTGAAAGTTGAATAAAAC+AGG | + | chr4.1:36675338-36675357 | None:intergenic | 25.0% |
| ! | AGAATACAATTATATTGCAG+GGG | - | chr4.1:36674477-36674496 | MS.gene41176:intron | 25.0% |
| ! | AGCAAAGTAGTAAATTCAAA+TGG | + | chr4.1:36675690-36675709 | None:intergenic | 25.0% |
| ! | AGTTGTAGTAGTAAAATGTA+AGG | - | chr4.1:36675150-36675169 | MS.gene41176:intron | 25.0% |
| ! | CAAGAATACAATTATATTGC+AGG | - | chr4.1:36674475-36674494 | MS.gene41176:intron | 25.0% |
| ! | GAATCATAACAATGTTTCTT+GGG | + | chr4.1:36675282-36675301 | None:intergenic | 25.0% |
| ! | TAAAATGAAAAACCCAATTG+GGG | + | chr4.1:36673806-36673825 | None:intergenic | 25.0% |
| ! | TACAACTAATGCCAAATAAT+AGG | + | chr4.1:36675137-36675156 | None:intergenic | 25.0% |
| ! | TGAATCATAACAATGTTTCT+TGG | + | chr4.1:36675283-36675302 | None:intergenic | 25.0% |
| ! | TTAGTATGATCTATCAATTG+TGG | + | chr4.1:36675106-36675125 | None:intergenic | 25.0% |
| ! | TTATTATGAAACGTCTTAGA+TGG | - | chr4.1:36673754-36673773 | MS.gene41176:CDS | 25.0% |
| ! | TTGTCCAATGTAAATTCATT+CGG | - | chr4.1:36676676-36676695 | MS.gene41176:CDS | 25.0% |
| !! | AAAGAGATGATAGTTTTCTA+AGG | + | chr4.1:36675999-36676018 | None:intergenic | 25.0% |
| !! | GTTTTATCTAAGCTTTTAGA+TGG | - | chr4.1:36673900-36673919 | MS.gene41176:intron | 25.0% |
| !! | TTTTCCGAATGAATTTACAT+TGG | + | chr4.1:36676683-36676702 | None:intergenic | 25.0% |
| !!! | ATATAATCACTTGTTTTGGT+AGG | - | chr4.1:36675204-36675223 | MS.gene41176:intron | 25.0% |
| !!! | GGGTTTTTCATTTTAATTTC+TGG | - | chr4.1:36673811-36673830 | MS.gene41176:CDS | 25.0% |
| !!! | TCCATTATACATTCACTTTT+GGG | - | chr4.1:36676192-36676211 | MS.gene41176:intron | 25.0% |
| !!! | TGTTGAATCATTTTGTTTTG+TGG | - | chr4.1:36674694-36674713 | MS.gene41176:CDS | 25.0% |
| !!! | TTTCATTTTAATTTCTGGGT+CGG | - | chr4.1:36673816-36673835 | MS.gene41176:CDS | 25.0% |
| AAAATGTAAGGAAGTCTCTA+AGG | - | chr4.1:36675162-36675181 | MS.gene41176:intron | 30.0% | |
| AAATTTCGTAACATGAACGA+GGG | - | chr4.1:36676631-36676650 | MS.gene41176:CDS | 30.0% | |
| AATTCATTCGGAAAAATGAG+CGG | - | chr4.1:36676688-36676707 | MS.gene41176:CDS | 30.0% | |
| AGGGAGAAAAACATATTGAA+AGG | - | chr4.1:36675576-36675595 | MS.gene41176:intron | 30.0% | |
| ATAAAACACACACAGTTTGA+AGG | + | chr4.1:36675380-36675399 | None:intergenic | 30.0% | |
| CGAGATCTAATGTAATTATC+AGG | - | chr4.1:36676342-36676361 | MS.gene41176:intron | 30.0% | |
| CTGATTATCTTCAATGATGA+TGG | + | chr4.1:36675495-36675514 | None:intergenic | 30.0% | |
| GATCTATCAATTGTGGAAAT+TGG | + | chr4.1:36675099-36675118 | None:intergenic | 30.0% | |
| TAACAATGTTTCTTGGGATA+AGG | + | chr4.1:36675276-36675295 | None:intergenic | 30.0% | |
| TACAGCAATGCAAATGTAAA+GGG | + | chr4.1:36676260-36676279 | None:intergenic | 30.0% | |
| TAGCAGGAAGTCTAATTATT+TGG | - | chr4.1:36675768-36675787 | MS.gene41176:intron | 30.0% | |
| TCTAATAAAACTTTAGCCTC+TGG | + | chr4.1:36675528-36675547 | None:intergenic | 30.0% | |
| TGTGCAGTTGAATTGAATTA+TGG | - | chr4.1:36675714-36675733 | MS.gene41176:CDS | 30.0% | |
| TTAATGTTTGATGTGTGTCA+TGG | - | chr4.1:36674266-36674285 | MS.gene41176:intron | 30.0% | |
| TTACAGCAATGCAAATGTAA+AGG | + | chr4.1:36676261-36676280 | None:intergenic | 30.0% | |
| ! | AAAGAGTAGAAACAGTTTTC+AGG | + | chr4.1:36673547-36673566 | None:intergenic | 30.0% |
| ! | ATCATCAACCCATTCATTTT+CGG | + | chr4.1:36676737-36676756 | None:intergenic | 30.0% |
| ! | CTTTCCTAATTGGTTCATAT+CGG | - | chr4.1:36674415-36674434 | MS.gene41176:intron | 30.0% |
| ! | GTCCATTATACATTCACTTT+TGG | - | chr4.1:36676191-36676210 | MS.gene41176:intron | 30.0% |
| !! | AATGGTTGGTAAGAAATCAA+AGG | + | chr4.1:36675672-36675691 | None:intergenic | 30.0% |
| !! | ATGGTTGGTAAGAAATCAAA+GGG | + | chr4.1:36675671-36675690 | None:intergenic | 30.0% |
| !! | CCATTATACATTCACTTTTG+GGG | - | chr4.1:36676193-36676212 | MS.gene41176:intron | 30.0% |
| !! | TGAAGATTTTTATTTCTCGC+TGG | + | chr4.1:36676288-36676307 | None:intergenic | 30.0% |
| !!! | TTTTTTTGTTGGGAATTTGC+AGG | - | chr4.1:36673878-36673897 | MS.gene41176:intron | 30.0% |
| AACTCTGAGCTATTTGTCTT+TGG | - | chr4.1:36675884-36675903 | MS.gene41176:CDS | 35.0% | |
| AACTTGAGATTGAACTGTTG+AGG | - | chr4.1:36675040-36675059 | MS.gene41176:intron | 35.0% | |
| AATCAGTGAACTTAATCCAG+AGG | - | chr4.1:36675509-36675528 | MS.gene41176:intron | 35.0% | |
| AATGGATGACAATATCTCTG+AGG | - | chr4.1:36675635-36675654 | MS.gene41176:CDS | 35.0% | |
| ACATAGATTACAAGTCAGAG+AGG | + | chr4.1:36676234-36676253 | None:intergenic | 35.0% | |
| ATCACCGATATGAACCAATT+AGG | + | chr4.1:36674422-36674441 | None:intergenic | 35.0% | |
| ATCATCTCTTTACCATCTGT+AGG | - | chr4.1:36676008-36676027 | MS.gene41176:intron | 35.0% | |
| ATCTAGACTGATGGTTATCA+AGG | - | chr4.1:36676540-36676559 | MS.gene41176:intron | 35.0% | |
| ATCTCACCAATGATGATCAA+TGG | - | chr4.1:36674892-36674911 | MS.gene41176:intron | 35.0% | |
| ATTGGTGAGATCTTATCAAG+TGG | + | chr4.1:36674883-36674902 | None:intergenic | 35.0% | |
| CCAAATCCATTGATCATCAT+TGG | + | chr4.1:36674901-36674920 | None:intergenic | 35.0% | |
| CCCCAAAAGTGAATGTATAA+TGG | + | chr4.1:36676196-36676215 | None:intergenic | 35.0% | |
| CGGTTTGTGAATATTAGAGA+CGG | - | chr4.1:36674507-36674526 | MS.gene41176:intron | 35.0% | |
| CTCGCAATAAGTATATAGTG+TGG | + | chr4.1:36676326-36676345 | None:intergenic | 35.0% | |
| GAAATTTCGTAACATGAACG+AGG | - | chr4.1:36676630-36676649 | MS.gene41176:CDS | 35.0% | |
| GAGTTTATGCATAATTCGAC+AGG | + | chr4.1:36675869-36675888 | None:intergenic | 35.0% | |
| GATAACCATCAGTCTAGATA+TGG | + | chr4.1:36676539-36676558 | None:intergenic | 35.0% | |
| GATTGCTTCCGAAAATGAAT+GGG | - | chr4.1:36676726-36676745 | MS.gene41176:CDS | 35.0% | |
| TAAAGGGAAAAGATTGAACC+TGG | + | chr4.1:36673655-36673674 | None:intergenic | 35.0% | |
| TAATTATCAGGTTAGCGAGA+CGG | - | chr4.1:36676354-36676373 | MS.gene41176:intron | 35.0% | |
| TACTTCAAAGCAACCACATA+TGG | + | chr4.1:36675414-36675433 | None:intergenic | 35.0% | |
| TAGTACGATTGAGAAGAGAA+GGG | + | chr4.1:36673580-36673599 | None:intergenic | 35.0% | |
| TCTAAGCCTAAAAGGTAAGT+GGG | + | chr4.1:36675945-36675964 | None:intergenic | 35.0% | |
| TGATTGCTTCCGAAAATGAA+TGG | - | chr4.1:36676725-36676744 | MS.gene41176:CDS | 35.0% | |
| TGGAAAGAATTGAATGTGTG+TGG | - | chr4.1:36674007-36674026 | MS.gene41176:intron | 35.0% | |
| ! | AAACTGTGTGTGTTTTATGC+AGG | - | chr4.1:36675382-36675401 | MS.gene41176:intron | 35.0% |
| ! | ATAGCAAACAAGAGCACAAT+AGG | + | chr4.1:36675235-36675254 | None:intergenic | 35.0% |
| ! | CAATGGATTTGGATTTCCTA+TGG | - | chr4.1:36674909-36674928 | MS.gene41176:intron | 35.0% |
| ! | CCAATGATGATCAATGGATT+TGG | - | chr4.1:36674898-36674917 | MS.gene41176:intron | 35.0% |
| ! | TTGCATTATGCTGCTTACTA+TGG | - | chr4.1:36674299-36674318 | MS.gene41176:intron | 35.0% |
| ! | TTTATTAGAGCAGGCCTTAT+TGG | - | chr4.1:36675539-36675558 | MS.gene41176:intron | 35.0% |
| !! | CGAAATTTCCTTGATTTGCT+TGG | + | chr4.1:36676619-36676638 | None:intergenic | 35.0% |
| !! | GACAATATCTCTGAGGTAAT+TGG | - | chr4.1:36675642-36675661 | MS.gene41176:CDS | 35.0% |
| !! | GTTGCTTTGAAGTACAAACA+TGG | - | chr4.1:36675420-36675439 | MS.gene41176:CDS | 35.0% |
| !!! | GGCTAAAGTTTTATTAGAGC+AGG | - | chr4.1:36675530-36675549 | MS.gene41176:intron | 35.0% |
| !!! | TTTTGTCGATTCAACACATC+TGG | + | chr4.1:36673936-36673955 | None:intergenic | 35.0% |
| AAAAACCCAATTGGGGAACT+TGG | + | chr4.1:36673799-36673818 | None:intergenic | 40.0% | |
| AAAACCCAATTGGGGAACTT+GGG | + | chr4.1:36673798-36673817 | None:intergenic | 40.0% | |
| AACAGAATGTGCACACATTC+AGG | + | chr4.1:36674576-36674595 | None:intergenic | 40.0% | |
| AACGATGAGTCTGATAAGCT+TGG | - | chr4.1:36674659-36674678 | MS.gene41176:CDS | 40.0% | |
| AATCTGAACTGTATCATCCC+AGG | + | chr4.1:36674981-36675000 | None:intergenic | 40.0% | |
| AATTCAGACCCCACTTATGT+TGG | - | chr4.1:36674090-36674109 | MS.gene41176:intron | 40.0% | |
| ACAATTGAAGTCCAAGACTG+TGG | - | chr4.1:36676409-36676428 | MS.gene41176:intron | 40.0% | |
| ACTCCGAATTATGAGATGGA+CGG | + | chr4.1:36673701-36673720 | None:intergenic | 40.0% | |
| ACTGTATCATCCCAGGTTAA+CGG | + | chr4.1:36674974-36674993 | None:intergenic | 40.0% | |
| ATCCGCGAATTATTAGCATG+GGG | - | chr4.1:36674796-36674815 | MS.gene41176:CDS | 40.0% | |
| CATCCGCGAATTATTAGCAT+GGG | - | chr4.1:36674795-36674814 | MS.gene41176:CDS | 40.0% | |
| CCTCTTCATTTAGCAGCTAA+AGG | - | chr4.1:36674757-36674776 | MS.gene41176:CDS | 40.0% | |
| CCTTTAGCTGCTAAATGAAG+AGG | + | chr4.1:36674760-36674779 | None:intergenic | 40.0% | |
| CGATCATCATCATGTCAAAC+AGG | - | chr4.1:36676066-36676085 | MS.gene41176:intron | 40.0% | |
| CTCATAATTCGGAGTTCAGT+CGG | - | chr4.1:36673706-36673725 | MS.gene41176:CDS | 40.0% | |
| CTCTAAGCCTAAAAGGTAAG+TGG | + | chr4.1:36675946-36675965 | None:intergenic | 40.0% | |
| CTGAACTCCGAATTATGAGA+TGG | + | chr4.1:36673705-36673724 | None:intergenic | 40.0% | |
| CTTCATTTAGCAGCTAAAGG+AGG | - | chr4.1:36674760-36674779 | MS.gene41176:CDS | 40.0% | |
| GCATGGAAAGATTGAATGTG+TGG | - | chr4.1:36674120-36674139 | MS.gene41176:intron | 40.0% | |
| GCTATATTTGCAGATGTCCT+GGG | - | chr4.1:36674728-36674747 | MS.gene41176:CDS | 40.0% | |
| GGTAACTTCTAACCTACAGA+TGG | + | chr4.1:36676023-36676042 | None:intergenic | 40.0% | |
| GTAGTACGATTGAGAAGAGA+AGG | + | chr4.1:36673581-36673600 | None:intergenic | 40.0% | |
| GTGAATATTAGAGACGGTAG+AGG | - | chr4.1:36674513-36674532 | MS.gene41176:intron | 40.0% | |
| GTGCTTCAACTAGCAGATAT+GGG | - | chr4.1:36674616-36674635 | MS.gene41176:CDS | 40.0% | |
| GTTTCAAGCCAAGCAAATCA+AGG | - | chr4.1:36676608-36676627 | MS.gene41176:CDS | 40.0% | |
| TAGATTACAAGTCAGAGAGG+CGG | + | chr4.1:36676231-36676250 | None:intergenic | 40.0% | |
| TGCTATATTTGCAGATGTCC+TGG | - | chr4.1:36674727-36674746 | MS.gene41176:CDS | 40.0% | |
| TGGATTTGGATTTCCTATGG+AGG | - | chr4.1:36674912-36674931 | MS.gene41176:intron | 40.0% | |
| TGGTCATTCTTCTTGCCTTA+AGG | - | chr4.1:36674319-36674338 | MS.gene41176:intron | 40.0% | |
| TGTAGAGGTAGTCATGAACA+TGG | - | chr4.1:36673494-36673513 | MS.gene41176:CDS | 40.0% | |
| TGTGCTTCAACTAGCAGATA+TGG | - | chr4.1:36674615-36674634 | MS.gene41176:CDS | 40.0% | |
| TGTGTTGAATCGACAAAAGC+AGG | - | chr4.1:36673938-36673957 | MS.gene41176:intron | 40.0% | |
| TTGATCTCAACCGTTAACCT+GGG | - | chr4.1:36674961-36674980 | MS.gene41176:intron | 40.0% | |
| TTTGATCTCAACCGTTAACC+TGG | - | chr4.1:36674960-36674979 | MS.gene41176:intron | 40.0% | |
| ! | ACATGATGATGATCGCTTGA+TGG | + | chr4.1:36676061-36676080 | None:intergenic | 40.0% |
| ! | ATTTTCGGAAGCAATCATCC+CGG | + | chr4.1:36676722-36676741 | None:intergenic | 40.0% |
| ! | CAAAGTGGTCTTAGTTGTAG+AGG | - | chr4.1:36673479-36673498 | MS.gene41176:CDS | 40.0% |
| ! | CATGATGATGATCGCTTGAT+GGG | + | chr4.1:36676060-36676079 | None:intergenic | 40.0% |
| ! | TACCTTTTAGGCTTAGAGCT+CGG | - | chr4.1:36675948-36675967 | MS.gene41176:CDS | 40.0% |
| ! | TTTGCTTGGCTTGAAACAAG+TGG | + | chr4.1:36676605-36676624 | None:intergenic | 40.0% |
| !! | AATGATGATGGCCATACAAG+AGG | + | chr4.1:36675483-36675502 | None:intergenic | 40.0% |
| !! | CAGCAGAAAGTATTGCCTTA+AGG | + | chr4.1:36674337-36674356 | None:intergenic | 40.0% |
| !! | GCTTCTTGGTTAGTCCTTTT+CGG | - | chr4.1:36674377-36674396 | MS.gene41176:intron | 40.0% |
| !!! | AGTTTTCTAAGGTAGCTCGT+TGG | + | chr4.1:36675988-36676007 | None:intergenic | 40.0% |
| !!! | GTTTTCTAAGGTAGCTCGTT+GGG | + | chr4.1:36675987-36676006 | None:intergenic | 40.0% |
| AACACTCTGCTGTCACAACA+AGG | - | chr4.1:36676459-36676478 | MS.gene41176:intron | 45.0% | |
| AAGCAATCATCCCGGAACTA+CGG | + | chr4.1:36676714-36676733 | None:intergenic | 45.0% | |
| AAGCGCCATATCTAGACTGA+TGG | - | chr4.1:36676531-36676550 | MS.gene41176:intron | 45.0% | |
| ATCTCCACACTCTGATCGAA+TGG | - | chr4.1:36675617-36675636 | MS.gene41176:CDS | 45.0% | |
| ATTCGATCAGAGTGTGGAGA+TGG | + | chr4.1:36675618-36675637 | None:intergenic | 45.0% | |
| CACCCCATGCTAATAATTCG+CGG | + | chr4.1:36674801-36674820 | None:intergenic | 45.0% | |
| CACGAAGACATGGATCTAGA+CGG | - | chr4.1:36676571-36676590 | MS.gene41176:intron | 45.0% | |
| CATTGCTGCCAACATAAGTG+GGG | + | chr4.1:36674101-36674120 | None:intergenic | 45.0% | |
| CCTCCGTCCATCTCATAATT+CGG | - | chr4.1:36673695-36673714 | MS.gene41176:CDS | 45.0% | |
| CGAATTATTAGCATGGGGTG+CGG | - | chr4.1:36674801-36674820 | MS.gene41176:CDS | 45.0% | |
| CTTATGTTGGCAGCAATGCA+TGG | - | chr4.1:36674103-36674122 | MS.gene41176:intron | 45.0% | |
| CTTCATATTGCTGCTGCCAA+TGG | - | chr4.1:36673623-36673642 | MS.gene41176:CDS | 45.0% | |
| CTTCGACAGAATGGACAGAT+GGG | + | chr4.1:36676514-36676533 | None:intergenic | 45.0% | |
| GAAGTTACCAATGCGTGTAG+CGG | - | chr4.1:36676034-36676053 | MS.gene41176:intron | 45.0% | |
| GCATCCGCGAATTATTAGCA+TGG | - | chr4.1:36674794-36674813 | MS.gene41176:CDS | 45.0% | |
| GCATTGCTGCCAACATAAGT+GGG | + | chr4.1:36674102-36674121 | None:intergenic | 45.0% | |
| GGTAGAAACTCACGAAGACA+TGG | - | chr4.1:36676561-36676580 | MS.gene41176:intron | 45.0% | |
| GTGCACATTCTGTTGTGTAG+TGG | - | chr4.1:36674582-36674601 | MS.gene41176:intron | 45.0% | |
| GTGGAAAAGTTGCTTGAAGC+TGG | - | chr4.1:36674139-36674158 | MS.gene41176:intron | 45.0% | |
| TATATTGCAGGGGCTTTGCA+CGG | - | chr4.1:36674487-36674506 | MS.gene41176:intron | 45.0% | |
| TCATCCATTCGATCAGAGTG+TGG | + | chr4.1:36675624-36675643 | None:intergenic | 45.0% | |
| TGCATTGCTGCCAACATAAG+TGG | + | chr4.1:36674103-36674122 | None:intergenic | 45.0% | |
| TGGCAGCAGCAATATGAAGA+GGG | + | chr4.1:36673622-36673641 | None:intergenic | 45.0% | |
| TGTGGAGATGGAAGAGAGTA+AGG | + | chr4.1:36675606-36675625 | None:intergenic | 45.0% | |
| TTGAACCTGGATCTGACCAT+TGG | + | chr4.1:36673642-36673661 | None:intergenic | 45.0% | |
| TTGGCAGCAGCAATATGAAG+AGG | + | chr4.1:36673623-36673642 | None:intergenic | 45.0% | |
| ! | ACCTTTTAGGCTTAGAGCTC+GGG | - | chr4.1:36675949-36675968 | MS.gene41176:CDS | 45.0% |
| ! | CTCTTTCGTGCTGTTCAACA+TGG | - | chr4.1:36673518-36673537 | MS.gene41176:CDS | 45.0% |
| ! | CTGTGTGTGTTTTATGCAGG+CGG | - | chr4.1:36675385-36675404 | MS.gene41176:intron | 45.0% |
| ! | GTCAAGCCCACTTACCTTTT+AGG | - | chr4.1:36675936-36675955 | MS.gene41176:CDS | 45.0% |
| !! | AAATGAAGAGGAGTACTCCC+AGG | + | chr4.1:36674748-36674767 | None:intergenic | 45.0% |
| AAAATGAGCGGCCGTAGTTC+CGG | - | chr4.1:36676700-36676719 | MS.gene41176:CDS | 50.0% | |
| ACAGAATGGACAGATGGGTG+GGG | + | chr4.1:36676509-36676528 | None:intergenic | 50.0% | |
| ACTAACCAAGAAGCAGCCAC+GGG | + | chr4.1:36674371-36674390 | None:intergenic | 50.0% | |
| ATCTGGCAGCTCGTCAAAGA+CGG | - | chr4.1:36674550-36674569 | MS.gene41176:intron | 50.0% | |
| ATGCAGGCGGATACCATATG+TGG | - | chr4.1:36675398-36675417 | MS.gene41176:CDS | 50.0% | |
| ATTGGACGCGAACAGGGAAA+GGG | - | chr4.1:36675557-36675576 | MS.gene41176:intron | 50.0% | |
| CATCTGCACAGCCTCTTGTA+TGG | - | chr4.1:36675469-36675488 | MS.gene41176:CDS | 50.0% | |
| CCGAATTATGAGATGGACGG+AGG | + | chr4.1:36673698-36673717 | None:intergenic | 50.0% | |
| GACAGAATGGACAGATGGGT+GGG | + | chr4.1:36676510-36676529 | None:intergenic | 50.0% | |
| GACTAACCAAGAAGCAGCCA+CGG | + | chr4.1:36674372-36674391 | None:intergenic | 50.0% | |
| GATATGGCGCTTCGACAGAA+TGG | + | chr4.1:36676523-36676542 | None:intergenic | 50.0% | |
| GCTTCGACAGAATGGACAGA+TGG | + | chr4.1:36676515-36676534 | None:intergenic | 50.0% | |
| GGCAGCAGCAATATGAAGAG+GGG | + | chr4.1:36673621-36673640 | None:intergenic | 50.0% | |
| GGCTTGACTAAGTCGTTACC+CGG | + | chr4.1:36675924-36675943 | None:intergenic | 50.0% | |
| GGGATGCGAAGTTGAAGTGT+TGG | + | chr4.1:36676485-36676504 | None:intergenic | 50.0% | |
| GGTAGCAGCAGCAGTTTCAA+GGG | - | chr4.1:36676652-36676671 | MS.gene41176:CDS | 50.0% | |
| GTCTCCAACGTGATGCATCT+GGG | - | chr4.1:36674827-36674846 | MS.gene41176:intron | 50.0% | |
| GTGTGCATTGTGCACACATC+TGG | + | chr4.1:36676438-36676457 | None:intergenic | 50.0% | |
| TATTGGACGCGAACAGGGAA+AGG | - | chr4.1:36675556-36675575 | MS.gene41176:intron | 50.0% | |
| TGAGCCCAAGTTCCCCAATT+GGG | - | chr4.1:36673791-36673810 | MS.gene41176:CDS | 50.0% | |
| TGCATTGTGCACACATCTGG+TGG | + | chr4.1:36676435-36676454 | None:intergenic | 50.0% | |
| TGTACCCAGATGCATCACGT+TGG | + | chr4.1:36674834-36674853 | None:intergenic | 50.0% | |
| TTCCCTGTTCGCGTCCAATA+AGG | + | chr4.1:36675556-36675575 | None:intergenic | 50.0% | |
| TTGAGCCCAAGTTCCCCAAT+TGG | - | chr4.1:36673790-36673809 | MS.gene41176:CDS | 50.0% | |
| TTGGGGAACTTGGGCTCAAA+TGG | + | chr4.1:36673789-36673808 | None:intergenic | 50.0% | |
| ! | AGGTGCTACACCATTGCATC+TGG | - | chr4.1:36674533-36674552 | MS.gene41176:intron | 50.0% |
| ! | ATGCTGCATCTGCTTTGAGC+AGG | - | chr4.1:36676381-36676400 | MS.gene41176:intron | 50.0% |
| ! | CCTTTTAGGCTTAGAGCTCG+GGG | - | chr4.1:36675950-36675969 | MS.gene41176:CDS | 50.0% |
| ! | TCTAAGGTAGCTCGTTGGGA+TGG | + | chr4.1:36675983-36676002 | None:intergenic | 50.0% |
| !!! | CAGCGTGCTTTTTCCTCCAT+AGG | + | chr4.1:36674928-36674947 | None:intergenic | 50.0% |
| AAATGAGCGGCCGTAGTTCC+GGG | - | chr4.1:36676701-36676720 | MS.gene41176:CDS | 55.0% | |
| AATGGACAGATGGGTGGGGT+GGG | + | chr4.1:36676505-36676524 | None:intergenic | 55.0% | |
| ACATCTGGTGGCCACAGTCT+TGG | + | chr4.1:36676423-36676442 | None:intergenic | 55.0% | |
| CGACAGAATGGACAGATGGG+TGG | + | chr4.1:36676511-36676530 | None:intergenic | 55.0% | |
| CGTCTCCAACGTGATGCATC+TGG | - | chr4.1:36674826-36674845 | MS.gene41176:intron | 55.0% | |
| GACTAAGTCGTTACCCGGCT+GGG | + | chr4.1:36675919-36675938 | None:intergenic | 55.0% | |
| GGGTAGCAGCAGCAGTTTCA+AGG | - | chr4.1:36676651-36676670 | MS.gene41176:CDS | 55.0% | |
| TGACGAGCTGCCAGATGCAA+TGG | + | chr4.1:36674546-36674565 | None:intergenic | 55.0% | |
| TGACTAAGTCGTTACCCGGC+TGG | + | chr4.1:36675920-36675939 | None:intergenic | 55.0% | |
| TGCTGCCAATGGTCAGATCC+AGG | - | chr4.1:36673634-36673653 | MS.gene41176:CDS | 55.0% | |
| TGCTGCTCAATCTAGTCCCG+TGG | - | chr4.1:36674352-36674371 | MS.gene41176:intron | 55.0% | |
| !! | AGGCCTTATTGGACGCGAAC+AGG | - | chr4.1:36675550-36675569 | MS.gene41176:intron | 55.0% |
| !! | CCCCGAGCTCTAAGCCTAAA+AGG | + | chr4.1:36675953-36675972 | None:intergenic | 55.0% |
| !! | GGCCTTATTGGACGCGAACA+GGG | - | chr4.1:36675551-36675570 | MS.gene41176:intron | 55.0% |
| CTAGTCCCGTGGCTGCTTCT+TGG | - | chr4.1:36674363-36674382 | MS.gene41176:intron | 60.0% | |
| GAATGGACAGATGGGTGGGG+TGG | + | chr4.1:36676506-36676525 | None:intergenic | 60.0% | |
| ! | TGATGGGCCGCTACACGCAT+TGG | + | chr4.1:36676044-36676063 | None:intergenic | 60.0% |
| !! | TTTGGCTCTGCTGTCCCAGC+CGG | - | chr4.1:36675902-36675921 | MS.gene41176:CDS | 60.0% |
| !! | TTGGCTCTGCTGTCCCAGCC+GGG | - | chr4.1:36675903-36675922 | MS.gene41176:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 36673473 | 36676768 | 36673473 | ID=MS.gene41176 |
| chr4.1 | mRNA | 36673473 | 36676768 | 36673473 | ID=MS.gene41176.t1;Parent=MS.gene41176 |
| chr4.1 | exon | 36676586 | 36676768 | 36676586 | ID=MS.gene41176.t1.exon1;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36676586 | 36676768 | 36676586 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| chr4.1 | exon | 36676282 | 36676341 | 36676282 | ID=MS.gene41176.t1.exon2;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36676282 | 36676341 | 36676282 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| chr4.1 | exon | 36676073 | 36676144 | 36676073 | ID=MS.gene41176.t1.exon3;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36676073 | 36676144 | 36676073 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| chr4.1 | exon | 36675857 | 36675978 | 36675857 | ID=MS.gene41176.t1.exon4;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36675857 | 36675978 | 36675857 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| chr4.1 | exon | 36675604 | 36675744 | 36675604 | ID=MS.gene41176.t1.exon5;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36675604 | 36675744 | 36675604 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| chr4.1 | exon | 36675393 | 36675500 | 36675393 | ID=MS.gene41176.t1.exon6;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36675393 | 36675500 | 36675393 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| chr4.1 | exon | 36674585 | 36674837 | 36674585 | ID=MS.gene41176.t1.exon7;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36674585 | 36674837 | 36674585 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| chr4.1 | exon | 36673473 | 36673877 | 36673473 | ID=MS.gene41176.t1.exon8;Parent=MS.gene41176.t1 |
| chr4.1 | CDS | 36673473 | 36673877 | 36673473 | ID=cds.MS.gene41176.t1;Parent=MS.gene41176.t1 |
| Gene Sequence |
| Protein sequence |
