Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044849.t1 | XP_003622019.1 | 100 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 2.80E-217 | 764.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044849.t1 | P53496 | 97.6 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 2.6e-216 | 752.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044849.t1 | G7L017 | 100.0 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 2.0e-217 | 764.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044849.t1 | MTR_7g026230 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 784 |
MS.gene044849.t1 | MTR_6g004000 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
MS.gene044849.t1 | MTR_0015s0130 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
MS.gene044849.t1 | MTR_2g096840 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
MS.gene044849.t1 | MTR_3g095530 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene044849.t1 | MTR_7g093260 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
MS.gene044849.t1 | MTR_2g008050 | 93.899 | 377 | 23 | 0 | 1 | 377 | 1 | 377 | 0.0 | 751 |
MS.gene044849.t1 | MTR_7g027185 | 43.272 | 379 | 201 | 3 | 10 | 374 | 7 | 385 | 3.00e-120 | 353 |
MS.gene044849.t1 | MTR_7g027185 | 44.507 | 355 | 184 | 2 | 10 | 351 | 7 | 361 | 1.13e-117 | 346 |
MS.gene044849.t1 | MTR_7g027185 | 47.557 | 307 | 159 | 1 | 10 | 314 | 7 | 313 | 5.71e-110 | 324 |
MS.gene044849.t1 | MTR_5g066400 | 37.360 | 447 | 206 | 12 | 1 | 376 | 1 | 444 | 1.22e-90 | 280 |
MS.gene044849.t1 | MTR_8g464900 | 36.574 | 432 | 201 | 11 | 1 | 362 | 1 | 429 | 4.02e-84 | 262 |
MS.gene044849.t1 | MTR_5g066400 | 34.753 | 446 | 191 | 12 | 1 | 376 | 1 | 416 | 5.74e-78 | 246 |
MS.gene044849.t1 | MTR_8g089630 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.86e-72 | 232 |
MS.gene044849.t1 | MTR_3g030550 | 38.158 | 380 | 209 | 9 | 7 | 377 | 1 | 363 | 3.11e-70 | 224 |
MS.gene044849.t1 | MTR_5g066400 | 34.250 | 400 | 192 | 11 | 1 | 332 | 1 | 397 | 1.14e-66 | 217 |
MS.gene044849.t1 | MTR_2g445210 | 29.314 | 423 | 233 | 8 | 8 | 366 | 6 | 426 | 1.04e-57 | 194 |
MS.gene044849.t1 | MTR_8g007440 | 32.955 | 264 | 150 | 5 | 77 | 319 | 9 | 266 | 8.37e-44 | 153 |
MS.gene044849.t1 | MTR_2g445210 | 27.957 | 372 | 202 | 8 | 8 | 315 | 6 | 375 | 9.38e-44 | 155 |
MS.gene044849.t1 | MTR_3g010170 | 31.313 | 297 | 180 | 9 | 91 | 371 | 179 | 467 | 4.85e-42 | 153 |
MS.gene044849.t1 | MTR_8g070520 | 31.741 | 293 | 173 | 10 | 91 | 366 | 187 | 469 | 1.40e-37 | 141 |
MS.gene044849.t1 | MTR_8g070520 | 31.295 | 278 | 165 | 9 | 91 | 352 | 187 | 454 | 2.86e-34 | 132 |
MS.gene044849.t1 | MTR_3g067945 | 29.365 | 252 | 159 | 7 | 9 | 245 | 21 | 268 | 4.16e-23 | 101 |
MS.gene044849.t1 | MTR_3g067945 | 33.607 | 122 | 78 | 2 | 250 | 368 | 586 | 707 | 2.57e-15 | 77.8 |
MS.gene044849.t1 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 340 | 376 | 41 | 77 | 4.15e-13 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044849.t1 | AT3G12110 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 770 |
MS.gene044849.t1 | AT3G53750 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene044849.t1 | AT3G53750 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene044849.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene044849.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene044849.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene044849.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene044849.t1 | AT3G46520 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
MS.gene044849.t1 | AT3G46520 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
MS.gene044849.t1 | AT5G09810 | 95.225 | 377 | 18 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
MS.gene044849.t1 | AT5G59370 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
MS.gene044849.t1 | AT5G59370 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
MS.gene044849.t1 | AT1G49240 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
MS.gene044849.t1 | AT3G18780 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
MS.gene044849.t1 | AT3G18780 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
MS.gene044849.t1 | AT3G18780 | 91.643 | 359 | 30 | 0 | 1 | 359 | 1 | 359 | 0.0 | 702 |
MS.gene044849.t1 | AT2G42100 | 84.783 | 368 | 56 | 0 | 10 | 377 | 11 | 378 | 0.0 | 677 |
MS.gene044849.t1 | AT2G42090 | 70.541 | 370 | 104 | 1 | 7 | 376 | 1 | 365 | 0.0 | 568 |
MS.gene044849.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
MS.gene044849.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
MS.gene044849.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
MS.gene044849.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
MS.gene044849.t1 | AT2G42170 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 4.65e-132 | 377 |
MS.gene044849.t1 | AT3G27000 | 43.536 | 379 | 200 | 3 | 10 | 374 | 7 | 385 | 1.01e-121 | 357 |
MS.gene044849.t1 | AT1G18450 | 37.020 | 443 | 209 | 9 | 1 | 376 | 1 | 440 | 1.03e-93 | 287 |
MS.gene044849.t1 | AT1G13180 | 34.223 | 412 | 219 | 9 | 10 | 372 | 9 | 417 | 1.10e-72 | 233 |
MS.gene044849.t1 | AT3G60830 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.06e-67 | 218 |
MS.gene044849.t1 | AT3G33520 | 30.879 | 421 | 233 | 7 | 10 | 377 | 5 | 420 | 4.81e-61 | 202 |
MS.gene044849.t1 | AT5G56180 | 32.394 | 284 | 167 | 9 | 91 | 358 | 50 | 324 | 5.98e-37 | 137 |
MS.gene044849.t1 | AT5G56180 | 32.394 | 284 | 167 | 9 | 91 | 358 | 182 | 456 | 3.36e-36 | 137 |
MS.gene044849.t1 | AT3G12380 | 31.008 | 258 | 153 | 9 | 9 | 245 | 21 | 274 | 3.63e-26 | 110 |
MS.gene044849.t1 | AT3G12380 | 33.103 | 145 | 93 | 2 | 228 | 368 | 572 | 716 | 4.69e-16 | 80.5 |
MS.gene044849.t1 | AT3G12380 | 30.859 | 256 | 150 | 9 | 9 | 245 | 21 | 268 | 1.87e-25 | 108 |
MS.gene044849.t1 | AT3G12380 | 33.103 | 145 | 93 | 2 | 228 | 368 | 566 | 710 | 4.93e-16 | 80.1 |
MS.gene044849.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
MS.gene044849.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
MS.gene044849.t1 | AT5G56180 | 33.663 | 202 | 111 | 8 | 91 | 281 | 182 | 371 | 6.16e-21 | 93.6 |
MS.gene044849.t1 | AT1G73910 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.54e-12 | 65.1 |
Find 118 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACGGTAACATTGTGCTTTC+AGG | 0.144297 | 7.1:-70804717 | MS.gene044849:CDS |
AAAAGCACTGGGTGTTCTTC+TGG | 0.181767 | 7.1:+70805753 | None:intergenic |
TGCTATGTATGTTGCTATTC+AGG | 0.269599 | 7.1:-70805655 | MS.gene044849:CDS |
GCAGGTATTGTGTTGGATTC+TGG | 0.277388 | 7.1:-70805152 | MS.gene044849:intron |
CACTTTCTGTGGACAATTGA+TGG | 0.320963 | 7.1:+70803992 | None:intergenic |
ACCTTGATCTTCATGCTACT+TGG | 0.331858 | 7.1:+70804633 | None:intergenic |
ATCTTCTCACGATTGGCCTT+AGG | 0.347633 | 7.1:+70805711 | None:intergenic |
GCTGTGTTTCCCAGCATTGT+AGG | 0.369101 | 7.1:-70805960 | MS.gene044849:CDS |
GAGCAAGGAAATTTCTGCTT+TGG | 0.374975 | 7.1:-70804658 | MS.gene044849:CDS |
CTCATTCTGTCAGCAATACC+TGG | 0.381011 | 7.1:+70804678 | None:intergenic |
AACATGGAATCGTTAGCAAC+TGG | 0.386131 | 7.1:-70805830 | MS.gene044849:CDS |
AGGGCATAACCCTCGTAGAT+AGG | 0.389103 | 7.1:+70805107 | None:intergenic |
CCTTGATCTTCATGCTACTT+GGG | 0.389144 | 7.1:+70804634 | None:intergenic |
TGCTGCTTCCATTCCTATCA+TGG | 0.390401 | 7.1:+70804803 | None:intergenic |
AAAGCACTGGGTGTTCTTCT+GGG | 0.391378 | 7.1:+70805754 | None:intergenic |
CTTGTTTGTGACAATGGAAC+TGG | 0.397675 | 7.1:-70806556 | MS.gene044849:CDS |
CTGAGAGAAAATACAGTGTC+TGG | 0.408420 | 7.1:-70804599 | MS.gene044849:CDS |
TCTTCTCACGATTGGCCTTA+GGG | 0.411910 | 7.1:+70805712 | None:intergenic |
CAAAATCTTCATCAAGAAAT+CGG | 0.413590 | 7.1:+70805040 | None:intergenic |
TGCCATCCTTCGTCTTGATC+TGG | 0.418422 | 7.1:-70805078 | MS.gene044849:CDS |
CTGGATTGGAGGTTCCATCT+TGG | 0.418962 | 7.1:-70804580 | MS.gene044849:CDS |
TGAAGTGCGATGTTGATATC+AGG | 0.420318 | 7.1:-70804749 | MS.gene044849:CDS |
GGGACGACATGGAAAAGATT+TGG | 0.423131 | 7.1:-70805809 | MS.gene044849:CDS |
CTAACGATTCCATGTTCAAT+GGG | 0.426897 | 7.1:+70805837 | None:intergenic |
CTGTTCCAACCATCCATGAT+AGG | 0.431004 | 7.1:-70804816 | MS.gene044849:CDS |
TTGAGTCATCTTCTCACGAT+TGG | 0.438247 | 7.1:+70805704 | None:intergenic |
ATCTCTTAGCACCTTCCAGC+AGG | 0.441982 | 7.1:-70804556 | MS.gene044849:intron |
CACTGGTGTGATGGTTGGCA+TGG | 0.445024 | 7.1:-70805925 | MS.gene044849:CDS |
CAACCTCTTGTTTGTGACAA+TGG | 0.449997 | 7.1:-70806562 | MS.gene044849:CDS |
CAATGGAACTGGAATGGTTA+AGG | 0.450612 | 7.1:-70806545 | MS.gene044849:intron |
CCTCGTAGATAGGGACAGTA+TGG | 0.450826 | 7.1:+70805117 | None:intergenic |
GATGGTTGGAACAGGACTTC+CGG | 0.453423 | 7.1:+70804825 | None:intergenic |
CTCGACGGATGAGCTGGTCC+TGG | 0.454464 | 7.1:+70804908 | None:intergenic |
GAGAGTCAAAATACCCCTCT+TGG | 0.454876 | 7.1:+70805866 | None:intergenic |
TCTCTATGCAGGTATTGTGT+TGG | 0.455001 | 7.1:-70805159 | MS.gene044849:intron |
CTACGAATTGCCTGATGGAC+AGG | 0.461381 | 7.1:-70804880 | MS.gene044849:CDS |
CTATCATGGATGGTTGGAAC+AGG | 0.471756 | 7.1:+70804817 | None:intergenic |
GCTAACGATTCCATGTTCAA+TGG | 0.473865 | 7.1:+70805836 | None:intergenic |
ATGGTGATCACCTGTCCATC+AGG | 0.477697 | 7.1:+70804870 | None:intergenic |
GGAGCCTCAGTTAAAAGCAC+TGG | 0.477920 | 7.1:+70805741 | None:intergenic |
AACACGAAGCTCATTGTAGA+AGG | 0.478617 | 7.1:+70805779 | None:intergenic |
AGAAAATACAGTGTCTGGAT+TGG | 0.479498 | 7.1:-70804594 | MS.gene044849:CDS |
AAGGCAGAATATGATGAATC+TGG | 0.482638 | 7.1:-70804016 | MS.gene044849:CDS |
AGCAAGAGCTCGAGACAGCC+AGG | 0.483315 | 7.1:-70804926 | MS.gene044849:CDS |
CTCAAATACCCCATTGAACA+TGG | 0.487849 | 7.1:-70805846 | MS.gene044849:CDS |
ACGCTCTGCTGAGGTGGTAA+AGG | 0.489245 | 7.1:+70805001 | None:intergenic |
AAATACAGTGTCTGGATTGG+AGG | 0.490757 | 7.1:-70804591 | MS.gene044849:CDS |
ATCCTTCGTCTTGATCTGGC+TGG | 0.494460 | 7.1:-70805074 | MS.gene044849:CDS |
TGAATAGCAACATACATAGC+AGG | 0.510580 | 7.1:+70805657 | None:intergenic |
AGACGAGCGTTTCAGATGTC+CGG | 0.510844 | 7.1:-70804844 | MS.gene044849:CDS |
GCTCTTCTCGACGGATGAGC+TGG | 0.511637 | 7.1:+70804902 | None:intergenic |
ACGAGGACGACCTACAATGC+TGG | 0.512907 | 7.1:+70805950 | None:intergenic |
GCTTCCATTCCTATCATGGA+TGG | 0.517343 | 7.1:+70804807 | None:intergenic |
CTTGATCTTCATGCTACTTG+GGG | 0.525749 | 7.1:+70804635 | None:intergenic |
GACGAAGGATGGCATGTGGA+AGG | 0.532459 | 7.1:+70805087 | None:intergenic |
TCTGAAACGCTCGTCTCCGA+TGG | 0.533062 | 7.1:+70804851 | None:intergenic |
TCCTCGTCACACTGGTGTGA+TGG | 0.533985 | 7.1:-70805934 | MS.gene044849:CDS |
ATTGTGTTGGATTCTGGTGA+TGG | 0.535950 | 7.1:-70805146 | MS.gene044849:CDS |
CGTTAGCAACTGGGACGACA+TGG | 0.537257 | 7.1:-70805820 | MS.gene044849:CDS |
GGGCATAACCCTCGTAGATA+GGG | 0.538631 | 7.1:+70805108 | None:intergenic |
AACAATTTCACGCTCTGCTG+AGG | 0.540758 | 7.1:+70804992 | None:intergenic |
CTTACCGGTGGTACGACCAC+TGG | 0.540927 | 7.1:+70805614 | None:intergenic |
CCCAAGTAGCATGAAGATCA+AGG | 0.546192 | 7.1:-70804634 | MS.gene044849:CDS |
CGAGCTCTTGCTCATAGTCA+AGG | 0.546253 | 7.1:+70804937 | None:intergenic |
GTCAGCAATACCTGGGAACA+TGG | 0.547298 | 7.1:+70804686 | None:intergenic |
CCATTCCTATCATGGATGGT+TGG | 0.548146 | 7.1:+70804811 | None:intergenic |
CGAGGACGACCTACAATGCT+GGG | 0.552606 | 7.1:+70805951 | None:intergenic |
AGCCAGATCAAGACGAAGGA+TGG | 0.553433 | 7.1:+70805076 | None:intergenic |
ATCAACATCGCACTTCATGA+TGG | 0.558200 | 7.1:+70804755 | None:intergenic |
ATGATAGGAATGGAAGCAGC+AGG | 0.559211 | 7.1:-70804801 | MS.gene044849:CDS |
CCAACCATCCATGATAGGAA+TGG | 0.569599 | 7.1:-70804811 | MS.gene044849:CDS |
ACATGGAATCGTTAGCAACT+GGG | 0.574134 | 7.1:-70805829 | MS.gene044849:CDS |
AAGCACTGGGTGTTCTTCTG+GGG | 0.574143 | 7.1:+70805755 | None:intergenic |
GAATAGCAACATACATAGCA+GGG | 0.577899 | 7.1:+70805658 | None:intergenic |
AATTTCACGCTCTGCTGAGG+TGG | 0.580226 | 7.1:+70804995 | None:intergenic |
GGAGGAACAACCATGTTCCC+AGG | 0.580274 | 7.1:-70804696 | MS.gene044849:CDS |
CAGCTTAGAAGCACTTTCTG+TGG | 0.581853 | 7.1:+70803981 | None:intergenic |
CGATTGGCCTTAGGGTTGAG+AGG | 0.589725 | 7.1:+70805720 | None:intergenic |
ACGAAGGATGGCATGTGGAA+GGG | 0.591719 | 7.1:+70805088 | None:intergenic |
GGTGCTAAGAGATGCCAAGA+TGG | 0.593241 | 7.1:+70804566 | None:intergenic |
AAGAGCTACGAATTGCCTGA+TGG | 0.595436 | 7.1:-70804885 | MS.gene044849:CDS |
TGAGGCTCCTCTCAACCCTA+AGG | 0.595543 | 7.1:-70805727 | MS.gene044849:CDS |
CGTCACACTGGTGTGATGGT+TGG | 0.597543 | 7.1:-70805930 | MS.gene044849:CDS |
ACTGGTGTGATGGTTGGCAT+GGG | 0.600381 | 7.1:-70805924 | MS.gene044849:CDS |
GATATCAGGAAAGACTTGTA+CGG | 0.601211 | 7.1:-70804735 | MS.gene044849:CDS |
GATGGACAGGTGATCACCAT+CGG | 0.601892 | 7.1:-70804867 | MS.gene044849:CDS |
TACGCCAGTGGTCGTACCAC+CGG | 0.602745 | 7.1:-70805618 | MS.gene044849:intron |
TTGTGACAATGGAACTGGAA+TGG | 0.606936 | 7.1:-70806551 | MS.gene044849:CDS |
GTTCCATTGTCACAAACAAG+AGG | 0.610975 | 7.1:+70806559 | None:intergenic |
TCTTCATCAAGAAATCGGTA+AGG | 0.614013 | 7.1:+70805045 | None:intergenic |
AACAAAACAAACCTGCTGGA+AGG | 0.616042 | 7.1:+70804545 | None:intergenic |
GAGCCTCAGTTAAAAGCACT+GGG | 0.616759 | 7.1:+70805742 | None:intergenic |
CTTCATGATGGAGTTGTATG+TGG | 0.618935 | 7.1:+70804767 | None:intergenic |
TGATGAGGCACAGTCCAAGA+GGG | 0.621032 | 7.1:-70805880 | MS.gene044849:CDS |
ATGCTGGGAAACACAGCACG+AGG | 0.626971 | 7.1:+70805966 | None:intergenic |
GAGCTCTTGCTCATAGTCAA+GGG | 0.628126 | 7.1:+70804938 | None:intergenic |
GTAGGTCGTCCTCGTCACAC+TGG | 0.629317 | 7.1:-70805942 | MS.gene044849:CDS |
GGTAACATTGTGCTTTCAGG+AGG | 0.633227 | 7.1:-70804714 | MS.gene044849:CDS |
GCTGGGAAACACAGCACGAG+GGG | 0.634384 | 7.1:+70805968 | None:intergenic |
GTTCTTTCACTGTACGCCAG+TGG | 0.634859 | 7.1:-70805630 | MS.gene044849:CDS |
TATTGCTGACAGAATGAGCA+AGG | 0.635482 | 7.1:-70804673 | MS.gene044849:CDS |
TGCTGGGAAACACAGCACGA+GGG | 0.642727 | 7.1:+70805967 | None:intergenic |
GTGATGAGGCACAGTCCAAG+AGG | 0.652823 | 7.1:-70805881 | MS.gene044849:CDS |
ACTGGCGTACAGTGAAAGAA+CGG | 0.656927 | 7.1:+70805632 | None:intergenic |
TCAAGACGAAGGATGGCATG+TGG | 0.658783 | 7.1:+70805083 | None:intergenic |
ACCATCACACCAGTGTGACG+AGG | 0.660573 | 7.1:+70805933 | None:intergenic |
AGATGCATATGTTGGTGATG+AGG | 0.661651 | 7.1:-70805895 | MS.gene044849:CDS |
TCATTCTGTCAGCAATACCT+GGG | 0.667942 | 7.1:+70804679 | None:intergenic |
CCATACTGTCCCTATCTACG+AGG | 0.672368 | 7.1:-70805117 | MS.gene044849:CDS |
CAATTCGTAGCTCTTCTCGA+CGG | 0.674512 | 7.1:+70804893 | None:intergenic |
GATGAGGCACAGTCCAAGAG+GGG | 0.682041 | 7.1:-70805879 | MS.gene044849:CDS |
GTAGACGATGGCAGACGCTG+AGG | 0.683003 | 7.1:-70806590 | None:intergenic |
GACCAGCCAGATCAAGACGA+AGG | 0.686380 | 7.1:+70805072 | None:intergenic |
AATAGCAACATACATAGCAG+GGG | 0.691158 | 7.1:+70805659 | None:intergenic |
AGTGCAGATGTGGATTGCAA+AGG | 0.699053 | 7.1:-70804035 | MS.gene044849:intron |
CATACTGTCCCTATCTACGA+GGG | 0.714771 | 7.1:-70805116 | MS.gene044849:CDS |
TAACGATTCCATGTTCAATG+GGG | 0.715992 | 7.1:+70805838 | None:intergenic |
AAGTAGCATGAAGATCAAGG+TGG | 0.766332 | 7.1:-70804631 | MS.gene044849:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTATATATAATGTTATTATA+TGG | - | chr7.1:70806069-70806088 | MS.gene044849:intron | 10.0% |
!! | AACATTATATATAGAGAAAA+AGG | + | chr7.1:70806063-70806082 | None:intergenic | 15.0% |
!!! | AAAACTTAATAAGCTATTTT+TGG | - | chr7.1:70806216-70806235 | MS.gene044849:intron | 15.0% |
!!! | GATTAGATTTTTTATTATGT+GGG | - | chr7.1:70804994-70805013 | MS.gene044849:CDS | 15.0% |
!!! | TATTAGCTTATAATTTTGTT+AGG | - | chr7.1:70804364-70804383 | MS.gene044849:intron | 15.0% |
!!! | TGATTAGATTTTTTATTATG+TGG | - | chr7.1:70804993-70805012 | MS.gene044849:CDS | 15.0% |
!!! | TTTATAAATTCCAAGTTTTA+GGG | + | chr7.1:70806110-70806129 | None:intergenic | 15.0% |
!!! | TTTTATAAATTCCAAGTTTT+AGG | + | chr7.1:70806111-70806130 | None:intergenic | 15.0% |
!! | AAATGTTGTTAGAAAGTAAA+CGG | - | chr7.1:70805219-70805238 | MS.gene044849:intron | 20.0% |
!! | AACACAAAACAAAACAATTT+AGG | + | chr7.1:70805247-70805266 | None:intergenic | 20.0% |
!! | ATTAAGCTATTTATTCAAAG+AGG | - | chr7.1:70806379-70806398 | MS.gene044849:intron | 20.0% |
!! | TTAAGCTATTTATTCAAAGA+GGG | - | chr7.1:70806380-70806399 | MS.gene044849:intron | 20.0% |
!!! | AGAAATGATCTTATTGTTTT+TGG | - | chr7.1:70804049-70804068 | MS.gene044849:intron | 20.0% |
!!! | ATTGAGAATTTTCAAATTCA+GGG | + | chr7.1:70806138-70806157 | None:intergenic | 20.0% |
!!! | CTATTTTCTCAAATTCAATT+AGG | + | chr7.1:70804538-70804557 | None:intergenic | 20.0% |
!!! | TTATAAATTCCAAGTTTTAG+GGG | + | chr7.1:70806109-70806128 | None:intergenic | 20.0% |
!!! | TTTCATTTGCAAATTTTACT+TGG | + | chr7.1:70805201-70805220 | None:intergenic | 20.0% |
! | AAAAGGACTAATATGATAGA+AGG | - | chr7.1:70806419-70806438 | MS.gene044849:intron | 25.0% |
! | AATAGAGATTCATATCAATC+GGG | + | chr7.1:70804135-70804154 | None:intergenic | 25.0% |
! | AATGTTGTTAGAAAGTAAAC+GGG | - | chr7.1:70805220-70805239 | MS.gene044849:intron | 25.0% |
! | AGACTCAATATATATTCCAT+TGG | - | chr7.1:70806487-70806506 | MS.gene044849:intron | 25.0% |
! | ATTATATGGCATTGTTAACT+AGG | - | chr7.1:70806083-70806102 | MS.gene044849:intron | 25.0% |
! | ATTCTCTATCATAATTGAAG+AGG | - | chr7.1:70805137-70805156 | MS.gene044849:CDS | 25.0% |
! | CAAAATCTTCATCAAGAAAT+CGG | + | chr7.1:70805531-70805550 | None:intergenic | 25.0% |
! | CAATAGAGATTCATATCAAT+CGG | + | chr7.1:70804136-70804155 | None:intergenic | 25.0% |
! | GTCATAAATCAAATGACAAA+TGG | + | chr7.1:70804308-70804327 | None:intergenic | 25.0% |
! | TAACTTATACATAAGCGTTA+TGG | - | chr7.1:70806332-70806351 | MS.gene044849:intron | 25.0% |
! | TATTGAGTCTATGAAATTGT+AGG | + | chr7.1:70806477-70806496 | None:intergenic | 25.0% |
!! | ACTAAGTTGACAAAAACAAA+AGG | + | chr7.1:70804277-70804296 | None:intergenic | 25.0% |
!! | GATTGAGAATTTTCAAATTC+AGG | + | chr7.1:70806139-70806158 | None:intergenic | 25.0% |
!! | TTCTATCATATTAGTCCTTT+TGG | + | chr7.1:70806420-70806439 | None:intergenic | 25.0% |
AAACTTAATGCTATCAACCA+TGG | + | chr7.1:70804450-70804469 | None:intergenic | 30.0% | |
AGTTGACAAAAACAAAAGGT+TGG | + | chr7.1:70804273-70804292 | None:intergenic | 30.0% | |
CTTATTTCCATAAGTTCTCT+AGG | - | chr7.1:70806239-70806258 | MS.gene044849:intron | 30.0% | |
GAGATTCTTCATAGAGAATT+GGG | + | chr7.1:70804212-70804231 | None:intergenic | 30.0% | |
GCAGTTAAAAAATGACTTAC+CGG | + | chr7.1:70804972-70804991 | None:intergenic | 30.0% | |
TAGTTATCCTAGAGAACTTA+TGG | + | chr7.1:70806249-70806268 | None:intergenic | 30.0% | |
TCATAATGCAGTACTTTAGT+TGG | - | chr7.1:70804483-70804502 | MS.gene044849:intron | 30.0% | |
! | AAAGTTTGTGTCATTACCAA+TGG | + | chr7.1:70806506-70806525 | None:intergenic | 30.0% |
! | CACTGACTGTTAAAATGAAT+GGG | - | chr7.1:70805276-70805295 | MS.gene044849:intron | 30.0% |
! | TATATTTTCTGTCTCTATGC+AGG | - | chr7.1:70805398-70805417 | MS.gene044849:intron | 30.0% |
! | TCACTGACTGTTAAAATGAA+TGG | - | chr7.1:70805275-70805294 | MS.gene044849:intron | 30.0% |
!! | AAGTTCTCTAGGATAACTTA+CGG | - | chr7.1:70806191-70806210 | MS.gene044849:intron | 30.0% |
!!! | TGATCTTATTGTTTTTGGCA+TGG | - | chr7.1:70804054-70804073 | MS.gene044849:intron | 30.0% |
AAGGCAGAATATGATGAATC+TGG | - | chr7.1:70806552-70806571 | MS.gene044849:CDS | 35.0% | |
AATAGCAACATACATAGCAG+GGG | + | chr7.1:70804912-70804931 | None:intergenic | 35.0% | |
AGAAAAAGGAGACACAAGAA+AGG | + | chr7.1:70806049-70806068 | None:intergenic | 35.0% | |
AGAAAATACAGTGTCTGGAT+TGG | - | chr7.1:70805974-70805993 | MS.gene044849:CDS | 35.0% | |
CGAGATTCTTCATAGAGAAT+TGG | + | chr7.1:70804213-70804232 | None:intergenic | 35.0% | |
CTAACGATTCCATGTTCAAT+GGG | + | chr7.1:70804734-70804753 | None:intergenic | 35.0% | |
GAATAGCAACATACATAGCA+GGG | + | chr7.1:70804913-70804932 | None:intergenic | 35.0% | |
GAGGAAAATCTACAACCAAA+TGG | - | chr7.1:70805156-70805175 | MS.gene044849:intron | 35.0% | |
GATATCAGGAAAGACTTGTA+CGG | - | chr7.1:70805833-70805852 | MS.gene044849:CDS | 35.0% | |
GGTCAAAAAGATGCATATGT+TGG | - | chr7.1:70804665-70804684 | MS.gene044849:CDS | 35.0% | |
GTAAGTTATCCTAGAGAACT+TGG | + | chr7.1:70806192-70806211 | None:intergenic | 35.0% | |
GTATTCAGAAGCTATGATTG+TGG | - | chr7.1:70805324-70805343 | MS.gene044849:intron | 35.0% | |
GTTAAAAAATGACTTACCGG+TGG | + | chr7.1:70804969-70804988 | None:intergenic | 35.0% | |
TAACGATTCCATGTTCAATG+GGG | + | chr7.1:70804733-70804752 | None:intergenic | 35.0% | |
TCTTCATCAAGAAATCGGTA+AGG | + | chr7.1:70805526-70805545 | None:intergenic | 35.0% | |
TGAATAGCAACATACATAGC+AGG | + | chr7.1:70804914-70804933 | None:intergenic | 35.0% | |
TGGGATTCATCGTAATGAAT+CGG | + | chr7.1:70804193-70804212 | None:intergenic | 35.0% | |
TTCATGATATGATCTCGAGT+TGG | - | chr7.1:70804421-70804440 | MS.gene044849:intron | 35.0% | |
! | AATTTTACTTGGCAAGTCTG+TGG | + | chr7.1:70805190-70805209 | None:intergenic | 35.0% |
! | ACACTAGAGAGAATGCATTT+TGG | + | chr7.1:70805107-70805126 | None:intergenic | 35.0% |
! | AGATTCCGATTTCTCTTTTC+AGG | - | chr7.1:70804556-70804575 | MS.gene044849:intron | 35.0% |
! | TCCTTTTGGATCAGTCATTT+AGG | + | chr7.1:70806406-70806425 | None:intergenic | 35.0% |
! | TGCTATGTATGTTGCTATTC+AGG | - | chr7.1:70804913-70804932 | MS.gene044849:CDS | 35.0% |
! | TTTTCTTATGAGTGCAGATG+TGG | - | chr7.1:70806523-70806542 | MS.gene044849:intron | 35.0% |
!!! | ATGAAGATTTTGACTGAACG+TGG | - | chr7.1:70805539-70805558 | MS.gene044849:intron | 35.0% |
AACAAAACAAACCTGCTGGA+AGG | + | chr7.1:70806026-70806045 | None:intergenic | 40.0% | |
AACACGAAGCTCATTGTAGA+AGG | + | chr7.1:70804792-70804811 | None:intergenic | 40.0% | |
AACATGGAATCGTTAGCAAC+TGG | - | chr7.1:70804738-70804757 | MS.gene044849:CDS | 40.0% | |
AAGGAACAAAACAAACCTGC+TGG | + | chr7.1:70806030-70806049 | None:intergenic | 40.0% | |
AAGTAGCATGAAGATCAAGG+TGG | - | chr7.1:70805937-70805956 | MS.gene044849:CDS | 40.0% | |
AAGTAGCTTCTGTGAGAAGT+AGG | - | chr7.1:70805299-70805318 | MS.gene044849:intron | 40.0% | |
ACATGGAATCGTTAGCAACT+GGG | - | chr7.1:70804739-70804758 | MS.gene044849:CDS | 40.0% | |
ACCTTGATCTTCATGCTACT+TGG | + | chr7.1:70805938-70805957 | None:intergenic | 40.0% | |
ATCAACATCGCACTTCATGA+TGG | + | chr7.1:70805816-70805835 | None:intergenic | 40.0% | |
ATTGTGTTGGATTCTGGTGA+TGG | - | chr7.1:70805422-70805441 | MS.gene044849:intron | 40.0% | |
CAATGGAACTGGAATGGTTA+AGG | - | chr7.1:70804023-70804042 | MS.gene044849:CDS | 40.0% | |
CACTTTCTGTGGACAATTGA+TGG | + | chr7.1:70806579-70806598 | None:intergenic | 40.0% | |
CTCAAATACCCCATTGAACA+TGG | - | chr7.1:70804722-70804741 | MS.gene044849:CDS | 40.0% | |
CTGAGAGAAAATACAGTGTC+TGG | - | chr7.1:70805969-70805988 | MS.gene044849:CDS | 40.0% | |
CTTGTTTGTGACAATGGAAC+TGG | - | chr7.1:70804012-70804031 | MS.gene044849:CDS | 40.0% | |
GACACGCTAAGTTTAGGTAA+TGG | + | chr7.1:70804251-70804270 | None:intergenic | 40.0% | |
GAGCAAGGAAATTTCTGCTT+TGG | - | chr7.1:70805910-70805929 | MS.gene044849:CDS | 40.0% | |
GCCTAAATGACTGATCCAAA+AGG | - | chr7.1:70806402-70806421 | MS.gene044849:intron | 40.0% | |
GCTAACGATTCCATGTTCAA+TGG | + | chr7.1:70804735-70804754 | None:intergenic | 40.0% | |
GGATTCATCGTAATGAATCG+GGG | + | chr7.1:70804191-70804210 | None:intergenic | 40.0% | |
GGGATTCATCGTAATGAATC+GGG | + | chr7.1:70804192-70804211 | None:intergenic | 40.0% | |
GTTCCATTGTCACAAACAAG+AGG | + | chr7.1:70804012-70804031 | None:intergenic | 40.0% | |
TACGGTAACATTGTGCTTTC+AGG | - | chr7.1:70805851-70805870 | MS.gene044849:CDS | 40.0% | |
TATTGCTGACAGAATGAGCA+AGG | - | chr7.1:70805895-70805914 | MS.gene044849:CDS | 40.0% | |
TCATTCTGTCAGCAATACCT+GGG | + | chr7.1:70805892-70805911 | None:intergenic | 40.0% | |
TCCAGCCTGAAAAGAGAAAT+CGG | + | chr7.1:70804564-70804583 | None:intergenic | 40.0% | |
TGAAGTGCGATGTTGATATC+AGG | - | chr7.1:70805819-70805838 | MS.gene044849:CDS | 40.0% | |
TTAACTAGGCCCCTAAAACT+TGG | - | chr7.1:70806097-70806116 | MS.gene044849:intron | 40.0% | |
TTGAGTCATCTTCTCACGAT+TGG | + | chr7.1:70804867-70804886 | None:intergenic | 40.0% | |
TTGTGACAATGGAACTGGAA+TGG | - | chr7.1:70804017-70804036 | MS.gene044849:CDS | 40.0% | |
TTTCAGAGACCAAGTTCTCT+AGG | - | chr7.1:70806180-70806199 | MS.gene044849:intron | 40.0% | |
! | AAATACAGTGTCTGGATTGG+AGG | - | chr7.1:70805977-70805996 | MS.gene044849:CDS | 40.0% |
! | ACACTGTATTTTCTCTCAGG+TGG | + | chr7.1:70805968-70805987 | None:intergenic | 40.0% |
! | CAACCTCTTGTTTGTGACAA+TGG | - | chr7.1:70804006-70804025 | MS.gene044849:CDS | 40.0% |
! | CAGACACTGTATTTTCTCTC+AGG | + | chr7.1:70805971-70805990 | None:intergenic | 40.0% |
! | CCTTGATCTTCATGCTACTT+GGG | + | chr7.1:70805937-70805956 | None:intergenic | 40.0% |
! | CTTCATGATGGAGTTGTATG+TGG | + | chr7.1:70805804-70805823 | None:intergenic | 40.0% |
! | CTTGATCTTCATGCTACTTG+GGG | + | chr7.1:70805936-70805955 | None:intergenic | 40.0% |
! | TCTCTATGCAGGTATTGTGT+TGG | - | chr7.1:70805409-70805428 | MS.gene044849:intron | 40.0% |
!! | AGATGCATATGTTGGTGATG+AGG | - | chr7.1:70804673-70804692 | MS.gene044849:CDS | 40.0% |
AACAATTTCACGCTCTGCTG+AGG | + | chr7.1:70805579-70805598 | None:intergenic | 45.0% | |
AAGAGCTACGAATTGCCTGA+TGG | - | chr7.1:70805683-70805702 | MS.gene044849:CDS | 45.0% | |
ACTGGCGTACAGTGAAAGAA+CGG | + | chr7.1:70804939-70804958 | None:intergenic | 45.0% | |
AGGTTGGACACGCTAAGTTT+AGG | + | chr7.1:70804257-70804276 | None:intergenic | 45.0% | |
ATGATAGGAATGGAAGCAGC+AGG | - | chr7.1:70805767-70805786 | MS.gene044849:CDS | 45.0% | |
CAATTCGTAGCTCTTCTCGA+CGG | + | chr7.1:70805678-70805697 | None:intergenic | 45.0% | |
CATACTGTCCCTATCTACGA+GGG | - | chr7.1:70805452-70805471 | MS.gene044849:intron | 45.0% | |
CCAACCATCCATGATAGGAA+TGG | - | chr7.1:70805757-70805776 | MS.gene044849:CDS | 45.0% | |
CCATTCCTATCATGGATGGT+TGG | + | chr7.1:70805760-70805779 | None:intergenic | 45.0% | |
CCCAAGTAGCATGAAGATCA+AGG | - | chr7.1:70805934-70805953 | MS.gene044849:CDS | 45.0% | |
CTATCATGGATGGTTGGAAC+AGG | + | chr7.1:70805754-70805773 | None:intergenic | 45.0% | |
CTCATTCTGTCAGCAATACC+TGG | + | chr7.1:70805893-70805912 | None:intergenic | 45.0% | |
CTGTTCCAACCATCCATGAT+AGG | - | chr7.1:70805752-70805771 | MS.gene044849:CDS | 45.0% | |
GAGAGTCAAAATACCCCTCT+TGG | + | chr7.1:70804705-70804724 | None:intergenic | 45.0% | |
GAGCTCTTGCTCATAGTCAA+GGG | + | chr7.1:70805633-70805652 | None:intergenic | 45.0% | |
GCTTCCATTCCTATCATGGA+TGG | + | chr7.1:70805764-70805783 | None:intergenic | 45.0% | |
GGGACGACATGGAAAAGATT+TGG | - | chr7.1:70804759-70804778 | MS.gene044849:CDS | 45.0% | |
GGTAACATTGTGCTTTCAGG+AGG | - | chr7.1:70805854-70805873 | MS.gene044849:CDS | 45.0% | |
! | AGTGCAGATGTGGATTGCAA+AGG | - | chr7.1:70806533-70806552 | MS.gene044849:intron | 45.0% |
! | GCAGGTATTGTGTTGGATTC+TGG | - | chr7.1:70805416-70805435 | MS.gene044849:intron | 45.0% |
! | TGCTGCTTCCATTCCTATCA+TGG | + | chr7.1:70805768-70805787 | None:intergenic | 45.0% |
!! | AAAAGCACTGGGTGTTCTTC+TGG | + | chr7.1:70804818-70804837 | None:intergenic | 45.0% |
!! | AAAGCACTGGGTGTTCTTCT+GGG | + | chr7.1:70804817-70804836 | None:intergenic | 45.0% |
!! | ACACCCAGTGCTTTTAACTG+AGG | - | chr7.1:70804823-70804842 | MS.gene044849:CDS | 45.0% |
!! | ATCTTCTCACGATTGGCCTT+AGG | + | chr7.1:70804860-70804879 | None:intergenic | 45.0% |
!! | GAGCCTCAGTTAAAAGCACT+GGG | + | chr7.1:70804829-70804848 | None:intergenic | 45.0% |
!! | TCCGATTTCTCTTTTCAGGC+TGG | - | chr7.1:70804560-70804579 | MS.gene044849:CDS | 45.0% |
!! | TCTTCTCACGATTGGCCTTA+GGG | + | chr7.1:70804859-70804878 | None:intergenic | 45.0% |
!! | TCTTTTCAGGCTGGATTTGC+TGG | - | chr7.1:70804569-70804588 | MS.gene044849:CDS | 45.0% |
!! | TGATCTCGAGTTGGTAACCA+TGG | - | chr7.1:70804430-70804449 | MS.gene044849:intron | 45.0% |
AATTTCACGCTCTGCTGAGG+TGG | + | chr7.1:70805576-70805595 | None:intergenic | 50.0% | |
ACGAAGGATGGCATGTGGAA+GGG | + | chr7.1:70805483-70805502 | None:intergenic | 50.0% | |
ACTGGTGTGATGGTTGGCAT+GGG | - | chr7.1:70804644-70804663 | MS.gene044849:CDS | 50.0% | |
AGACGAGCGTTTCAGATGTC+CGG | - | chr7.1:70805724-70805743 | MS.gene044849:CDS | 50.0% | |
AGCCAGATCAAGACGAAGGA+TGG | + | chr7.1:70805495-70805514 | None:intergenic | 50.0% | |
AGGGCATAACCCTCGTAGAT+AGG | + | chr7.1:70805464-70805483 | None:intergenic | 50.0% | |
ATCCTTCGTCTTGATCTGGC+TGG | - | chr7.1:70805494-70805513 | MS.gene044849:intron | 50.0% | |
ATCTCTTAGCACCTTCCAGC+AGG | - | chr7.1:70806012-70806031 | MS.gene044849:intron | 50.0% | |
ATGGTGATCACCTGTCCATC+AGG | + | chr7.1:70805701-70805720 | None:intergenic | 50.0% | |
CCATACTGTCCCTATCTACG+AGG | - | chr7.1:70805451-70805470 | MS.gene044849:intron | 50.0% | |
CCTCGTAGATAGGGACAGTA+TGG | + | chr7.1:70805454-70805473 | None:intergenic | 50.0% | |
CGAGCTCTTGCTCATAGTCA+AGG | + | chr7.1:70805634-70805653 | None:intergenic | 50.0% | |
GATGGACAGGTGATCACCAT+CGG | - | chr7.1:70805701-70805720 | MS.gene044849:CDS | 50.0% | |
GATGGTTGGAACAGGACTTC+CGG | + | chr7.1:70805746-70805765 | None:intergenic | 50.0% | |
GCTGTGTTTCCCAGCATTGT+AGG | - | chr7.1:70804608-70804627 | MS.gene044849:CDS | 50.0% | |
GGGCATAACCCTCGTAGATA+GGG | + | chr7.1:70805463-70805482 | None:intergenic | 50.0% | |
GGTGCTAAGAGATGCCAAGA+TGG | + | chr7.1:70806005-70806024 | None:intergenic | 50.0% | |
GTCAGCAATACCTGGGAACA+TGG | + | chr7.1:70805885-70805904 | None:intergenic | 50.0% | |
GTTCTTTCACTGTACGCCAG+TGG | - | chr7.1:70804938-70804957 | MS.gene044849:CDS | 50.0% | |
TCAAGACGAAGGATGGCATG+TGG | + | chr7.1:70805488-70805507 | None:intergenic | 50.0% | |
TCTGTGGCTGGAATGCCATT+TGG | + | chr7.1:70805174-70805193 | None:intergenic | 50.0% | |
TGATGAGGCACAGTCCAAGA+GGG | - | chr7.1:70804688-70804707 | MS.gene044849:CDS | 50.0% | |
TGCCATCCTTCGTCTTGATC+TGG | - | chr7.1:70805490-70805509 | MS.gene044849:intron | 50.0% | |
TTACTTGGCAAGTCTGTGGC+TGG | + | chr7.1:70805186-70805205 | None:intergenic | 50.0% | |
! | CTACGAATTGCCTGATGGAC+AGG | - | chr7.1:70805688-70805707 | MS.gene044849:CDS | 50.0% |
! | CTGGATTGGAGGTTCCATCT+TGG | - | chr7.1:70805988-70806007 | MS.gene044849:CDS | 50.0% |
! | GGAGCCTCAGTTAAAAGCAC+TGG | + | chr7.1:70804830-70804849 | None:intergenic | 50.0% |
!! | AAGCACTGGGTGTTCTTCTG+GGG | + | chr7.1:70804816-70804835 | None:intergenic | 50.0% |
ACCATCACACCAGTGTGACG+AGG | + | chr7.1:70804638-70804657 | None:intergenic | 55.0% | |
ACGAGGACGACCTACAATGC+TGG | + | chr7.1:70804621-70804640 | None:intergenic | 55.0% | |
ACGCTCTGCTGAGGTGGTAA+AGG | + | chr7.1:70805570-70805589 | None:intergenic | 55.0% | |
ATGCTGGGAAACACAGCACG+AGG | + | chr7.1:70804605-70804624 | None:intergenic | 55.0% | |
CACTGGTGTGATGGTTGGCA+TGG | - | chr7.1:70804643-70804662 | MS.gene044849:CDS | 55.0% | |
CGAGGACGACCTACAATGCT+GGG | + | chr7.1:70804620-70804639 | None:intergenic | 55.0% | |
CGTCACACTGGTGTGATGGT+TGG | - | chr7.1:70804638-70804657 | MS.gene044849:CDS | 55.0% | |
CGTTAGCAACTGGGACGACA+TGG | - | chr7.1:70804748-70804767 | MS.gene044849:CDS | 55.0% | |
GACCAGCCAGATCAAGACGA+AGG | + | chr7.1:70805499-70805518 | None:intergenic | 55.0% | |
GACGAAGGATGGCATGTGGA+AGG | + | chr7.1:70805484-70805503 | None:intergenic | 55.0% | |
GATGAGGCACAGTCCAAGAG+GGG | - | chr7.1:70804689-70804708 | MS.gene044849:CDS | 55.0% | |
GGAGGAACAACCATGTTCCC+AGG | - | chr7.1:70805872-70805891 | MS.gene044849:CDS | 55.0% | |
GTGATGAGGCACAGTCCAAG+AGG | - | chr7.1:70804687-70804706 | MS.gene044849:CDS | 55.0% | |
TCCTCGTCACACTGGTGTGA+TGG | - | chr7.1:70804634-70804653 | MS.gene044849:CDS | 55.0% | |
TGAGGCTCCTCTCAACCCTA+AGG | - | chr7.1:70804841-70804860 | MS.gene044849:CDS | 55.0% | |
TGCTGGGAAACACAGCACGA+GGG | + | chr7.1:70804604-70804623 | None:intergenic | 55.0% | |
! | TCTGAAACGCTCGTCTCCGA+TGG | + | chr7.1:70805720-70805739 | None:intergenic | 55.0% |
!! | CGATTGGCCTTAGGGTTGAG+AGG | + | chr7.1:70804851-70804870 | None:intergenic | 55.0% |
AGCAAGAGCTCGAGACAGCC+AGG | - | chr7.1:70805642-70805661 | MS.gene044849:CDS | 60.0% | |
CTTACCGGTGGTACGACCAC+TGG | + | chr7.1:70804957-70804976 | None:intergenic | 60.0% | |
GCTCTTCTCGACGGATGAGC+TGG | + | chr7.1:70805669-70805688 | None:intergenic | 60.0% | |
GCTGGGAAACACAGCACGAG+GGG | + | chr7.1:70804603-70804622 | None:intergenic | 60.0% | |
GTAGGTCGTCCTCGTCACAC+TGG | - | chr7.1:70804626-70804645 | MS.gene044849:CDS | 60.0% | |
TACGCCAGTGGTCGTACCAC+CGG | - | chr7.1:70804950-70804969 | MS.gene044849:CDS | 60.0% | |
CTCGACGGATGAGCTGGTCC+TGG | + | chr7.1:70805663-70805682 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 70803985 | 70806605 | 70803985 | ID=MS.gene044849 |
chr7.1 | mRNA | 70803985 | 70806605 | 70803985 | ID=MS.gene044849.t1;Parent=MS.gene044849 |
chr7.1 | exon | 70806546 | 70806605 | 70806546 | ID=MS.gene044849.t1.exon1;Parent=MS.gene044849.t1 |
chr7.1 | CDS | 70806546 | 70806605 | 70806546 | ID=cds.MS.gene044849.t1;Parent=MS.gene044849.t1 |
chr7.1 | exon | 70805619 | 70806012 | 70805619 | ID=MS.gene044849.t1.exon2;Parent=MS.gene044849.t1 |
chr7.1 | CDS | 70805619 | 70806012 | 70805619 | ID=cds.MS.gene044849.t1;Parent=MS.gene044849.t1 |
chr7.1 | exon | 70804557 | 70805170 | 70804557 | ID=MS.gene044849.t1.exon3;Parent=MS.gene044849.t1 |
chr7.1 | CDS | 70804557 | 70805170 | 70804557 | ID=cds.MS.gene044849.t1;Parent=MS.gene044849.t1 |
chr7.1 | exon | 70803985 | 70804050 | 70803985 | ID=MS.gene044849.t1.exon4;Parent=MS.gene044849.t1 |
chr7.1 | CDS | 70803985 | 70804050 | 70803985 | ID=cds.MS.gene044849.t1;Parent=MS.gene044849.t1 |
Gene Sequence |
Protein sequence |