Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071169.t1 | XP_013456116.1 | 97.8 | 414 | 9 | 0 | 1 | 414 | 34 | 447 | 3.80E-199 | 704.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071169.t1 | Q94B55 | 64.4 | 421 | 138 | 2 | 1 | 410 | 33 | 452 | 7.8e-129 | 461.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071169.t1 | A0A072UKA7 | 97.8 | 414 | 9 | 0 | 1 | 414 | 34 | 447 | 2.7e-199 | 704.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057669 | MS.gene071169 | 0.810259 | 1.26E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071169.t1 | MTR_4g063830 | 98.068 | 414 | 8 | 0 | 1 | 414 | 34 | 447 | 0.0 | 844 |
| MS.gene071169.t1 | MTR_2g096760 | 75.728 | 412 | 95 | 4 | 3 | 412 | 35 | 443 | 0.0 | 649 |
| MS.gene071169.t1 | MTR_4g021880 | 63.547 | 406 | 140 | 4 | 5 | 407 | 123 | 523 | 2.26e-174 | 498 |
| MS.gene071169.t1 | MTR_4g021880 | 66.443 | 298 | 98 | 1 | 5 | 302 | 123 | 418 | 2.17e-129 | 379 |
| MS.gene071169.t1 | MTR_0020s0130 | 32.791 | 369 | 188 | 11 | 2 | 339 | 33 | 372 | 1.02e-40 | 151 |
| MS.gene071169.t1 | MTR_1g100797 | 30.563 | 373 | 199 | 11 | 2 | 343 | 33 | 376 | 2.45e-36 | 139 |
| MS.gene071169.t1 | MTR_4g129470 | 30.270 | 370 | 198 | 8 | 2 | 343 | 39 | 376 | 5.57e-34 | 132 |
| MS.gene071169.t1 | MTR_4g129470 | 29.968 | 317 | 168 | 8 | 52 | 343 | 1 | 288 | 1.04e-24 | 105 |
| MS.gene071169.t1 | MTR_1g100797 | 29.412 | 306 | 164 | 11 | 48 | 343 | 9 | 272 | 1.26e-22 | 99.4 |
| MS.gene071169.t1 | MTR_7g117620 | 32.487 | 197 | 111 | 6 | 15 | 206 | 117 | 296 | 1.42e-14 | 75.9 |
| MS.gene071169.t1 | MTR_1g115575 | 30.357 | 168 | 102 | 4 | 17 | 183 | 169 | 322 | 4.49e-14 | 74.3 |
| MS.gene071169.t1 | MTR_2g096190 | 30.769 | 169 | 98 | 5 | 18 | 183 | 105 | 257 | 1.52e-12 | 69.7 |
| MS.gene071169.t1 | MTR_7g100390 | 31.176 | 170 | 96 | 6 | 18 | 183 | 88 | 240 | 2.61e-12 | 68.9 |
| MS.gene071169.t1 | MTR_6g027840 | 29.000 | 200 | 126 | 4 | 18 | 217 | 181 | 364 | 1.35e-11 | 66.6 |
| MS.gene071169.t1 | MTR_5g043640 | 32.620 | 187 | 106 | 4 | 13 | 196 | 53 | 222 | 2.62e-11 | 63.9 |
| MS.gene071169.t1 | MTR_7g115280 | 27.076 | 277 | 165 | 8 | 18 | 263 | 59 | 329 | 4.14e-11 | 65.1 |
| MS.gene071169.t1 | MTR_4g062100 | 29.341 | 167 | 103 | 4 | 18 | 183 | 109 | 261 | 5.27e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071169.t1 | AT2G28840 | 69.575 | 424 | 116 | 4 | 1 | 413 | 33 | 454 | 0.0 | 599 |
| MS.gene071169.t1 | AT2G28840 | 69.948 | 386 | 103 | 4 | 39 | 413 | 57 | 440 | 0.0 | 552 |
| MS.gene071169.t1 | AT5G07270 | 31.117 | 376 | 210 | 8 | 2 | 355 | 33 | 381 | 7.28e-39 | 146 |
| MS.gene071169.t1 | AT5G57740 | 29.041 | 365 | 204 | 9 | 2 | 339 | 39 | 375 | 6.56e-27 | 112 |
| MS.gene071169.t1 | AT5G02620 | 27.331 | 311 | 182 | 12 | 4 | 296 | 81 | 365 | 1.53e-16 | 82.0 |
| MS.gene071169.t1 | AT5G02620 | 27.331 | 311 | 182 | 12 | 4 | 296 | 81 | 365 | 1.53e-16 | 82.0 |
| MS.gene071169.t1 | AT5G02620 | 27.331 | 311 | 182 | 12 | 4 | 296 | 81 | 365 | 1.53e-16 | 82.0 |
| MS.gene071169.t1 | AT5G02620 | 31.111 | 180 | 103 | 5 | 4 | 179 | 81 | 243 | 6.35e-15 | 77.0 |
| MS.gene071169.t1 | AT5G02620 | 31.111 | 180 | 103 | 5 | 4 | 179 | 81 | 243 | 6.35e-15 | 77.0 |
| MS.gene071169.t1 | AT3G04710 | 32.093 | 215 | 103 | 6 | 18 | 203 | 59 | 259 | 2.04e-14 | 75.1 |
| MS.gene071169.t1 | AT5G60070 | 27.090 | 299 | 179 | 12 | 17 | 297 | 111 | 388 | 2.11e-14 | 75.5 |
| MS.gene071169.t1 | AT5G60070 | 30.000 | 170 | 104 | 3 | 16 | 183 | 75 | 231 | 1.03e-11 | 67.0 |
| MS.gene071169.t1 | AT3G04710 | 32.093 | 215 | 103 | 6 | 18 | 203 | 283 | 483 | 2.58e-14 | 75.5 |
| MS.gene071169.t1 | AT3G12360 | 31.694 | 183 | 107 | 7 | 15 | 193 | 153 | 321 | 6.76e-14 | 73.9 |
| MS.gene071169.t1 | AT3G12360 | 31.694 | 183 | 107 | 7 | 15 | 193 | 165 | 333 | 7.72e-14 | 73.9 |
| MS.gene071169.t1 | AT3G04710 | 28.625 | 269 | 137 | 7 | 18 | 257 | 59 | 301 | 1.63e-13 | 72.4 |
| MS.gene071169.t1 | AT5G20350 | 28.000 | 200 | 126 | 4 | 18 | 215 | 69 | 252 | 2.66e-12 | 68.9 |
| MS.gene071169.t1 | AT2G31820 | 28.641 | 206 | 131 | 6 | 17 | 220 | 227 | 418 | 3.62e-12 | 68.6 |
| MS.gene071169.t1 | AT1G07710 | 32.544 | 169 | 97 | 5 | 18 | 184 | 105 | 258 | 1.25e-11 | 66.6 |
| MS.gene071169.t1 | AT1G07710 | 32.544 | 169 | 97 | 5 | 18 | 184 | 105 | 258 | 1.25e-11 | 66.6 |
| MS.gene071169.t1 | AT5G13530 | 26.590 | 173 | 111 | 4 | 13 | 183 | 510 | 668 | 3.83e-11 | 65.9 |
| MS.gene071169.t1 | AT5G13530 | 26.590 | 173 | 111 | 4 | 13 | 183 | 510 | 668 | 3.93e-11 | 65.9 |
Find 99 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTAGAGCAGGCATTAT+TGG | 0.246425 | 4.2:+41332309 | MS.gene071169:CDS |
| CTAGTCCCGTGGCTGCTTCT+TGG | 0.292776 | 4.2:+41331133 | MS.gene071169:CDS |
| AAAATGAGCGGCCGTAGTTC+CGG | 0.300237 | 4.2:+41333470 | MS.gene071169:CDS |
| TGTGCTTCAACTAGCAGATA+TGG | 0.305279 | 4.2:+41331385 | MS.gene071169:CDS |
| CGTCTCCAACGTGATGCATC+TGG | 0.332475 | 4.2:+41331596 | MS.gene071169:CDS |
| TGGTCATTCTTCTTGCCTTA+AGG | 0.368140 | 4.2:+41331089 | MS.gene071169:CDS |
| AGGCATTATTGGACGCGAAC+AGG | 0.370869 | 4.2:+41332320 | MS.gene071169:CDS |
| GATAACCATCAGTTTAGATA+TGG | 0.374202 | 4.2:-41333306 | None:intergenic |
| TGTGGAGATGGAAGAGAGTA+AGG | 0.374735 | 4.2:-41332373 | None:intergenic |
| AAATGAGCGGCCGTAGTTCC+GGG | 0.375798 | 4.2:+41333471 | MS.gene071169:CDS |
| CGAAATTTCCTTGATTTGCT+TGG | 0.378282 | 4.2:-41333386 | None:intergenic |
| TTGCATTATGCTGCTTACTA+TGG | 0.392266 | 4.2:+41331069 | MS.gene071169:CDS |
| TACTTCAAAGCAACCACATA+TGG | 0.395193 | 4.2:-41332181 | None:intergenic |
| AACAGAATGTGCACACATTC+AGG | 0.420204 | 4.2:-41331343 | None:intergenic |
| CATCTGCACAGCCTCTTGTA+TGG | 0.420700 | 4.2:+41332239 | MS.gene071169:CDS |
| TTGTCCAATGTAAATTCATT+CGG | 0.426931 | 4.2:+41333446 | MS.gene071169:CDS |
| CCTCTTCATTTAGCAGCTAA+AGG | 0.427567 | 4.2:+41331527 | MS.gene071169:CDS |
| CTGATTATCTTCAATGATGA+TGG | 0.429013 | 4.2:-41332262 | None:intergenic |
| GGGTAGCAGCAGCAGTTTCA+AGG | 0.445286 | 4.2:+41333421 | MS.gene071169:CDS |
| AGGTGCTACACCATTGCATC+TGG | 0.451079 | 4.2:+41331303 | MS.gene071169:CDS |
| TGATTGCTTCCGAAAATGAA+TGG | 0.451396 | 4.2:+41333495 | MS.gene071169:CDS |
| ACATCTGGTGGCCACAGTCT+TGG | 0.456216 | 4.2:-41333190 | None:intergenic |
| TCTAATAAAACTTTAGCCTC+TGG | 0.458151 | 4.2:-41332295 | None:intergenic |
| TGCTATATTTGCAGATGTCC+TGG | 0.458321 | 4.2:+41331497 | MS.gene071169:intron |
| ATCTAAACTGATGGTTATCA+AGG | 0.465152 | 4.2:+41333310 | MS.gene071169:CDS |
| GTGTGCATTGTGCACACATC+TGG | 0.471356 | 4.2:-41333205 | None:intergenic |
| GATATGGCGCTTCGACAGAA+TGG | 0.471448 | 4.2:-41333290 | None:intergenic |
| GTTTCAAGCCAAGCAAATCA+AGG | 0.478084 | 4.2:+41333378 | MS.gene071169:CDS |
| GTGCTTCAACTAGCAGATAT+GGG | 0.478560 | 4.2:+41331386 | MS.gene071169:CDS |
| CTTCATATTGCTGCTGCCAA+TGG | 0.485862 | 4.2:+41330422 | MS.gene071169:CDS |
| TATTGGACGCGAACAGGGAA+AGG | 0.487813 | 4.2:+41332326 | MS.gene071169:CDS |
| TGCTGCCAATGGTCAGATCC+AGG | 0.493489 | 4.2:+41330433 | MS.gene071169:CDS |
| TGCATTGCTGCCAACATAAG+TGG | 0.493653 | 4.2:-41330866 | None:intergenic |
| CAGCAGAAAGTATTGCCTTA+AGG | 0.496959 | 4.2:-41331104 | None:intergenic |
| GGTAGCAGCAGCAGTTTCAA+GGG | 0.499150 | 4.2:+41333422 | MS.gene071169:CDS |
| GCTATATTTGCAGATGTCCT+GGG | 0.514636 | 4.2:+41331498 | MS.gene071169:intron |
| CATCCGCGAATTATTAGCAT+GGG | 0.514704 | 4.2:+41331565 | MS.gene071169:CDS |
| TGTGTTGAATCGACAAAAGC+AGG | 0.516759 | 4.2:+41330704 | MS.gene071169:CDS |
| ATCTCCACACTCTGATCGAA+TGG | 0.518796 | 4.2:+41332387 | MS.gene071169:CDS |
| ATGCAGGCGGATACCATATG+TGG | 0.519878 | 4.2:+41332168 | MS.gene071169:intron |
| GTCTCCAACGTGATGCATCT+GGG | 0.525701 | 4.2:+41331597 | MS.gene071169:CDS |
| AATGGACAGATGGGTGGGGT+GGG | 0.525799 | 4.2:-41333272 | None:intergenic |
| ATGCTGCATCTGCTTTGAGC+AGG | 0.528277 | 4.2:+41333151 | MS.gene071169:CDS |
| GACAGAATGGACAGATGGGT+GGG | 0.529180 | 4.2:-41333277 | None:intergenic |
| CACCCCATGCTAATAATTCG+CGG | 0.532650 | 4.2:-41331568 | None:intergenic |
| ATTCGATCAGAGTGTGGAGA+TGG | 0.534607 | 4.2:-41332385 | None:intergenic |
| GAATGGACAGATGGGTGGGG+TGG | 0.536558 | 4.2:-41333273 | None:intergenic |
| GTAGTACGATTGAGAAGAGA+AGG | 0.541763 | 4.2:-41330377 | None:intergenic |
| GGCATTATTGGACGCGAACA+GGG | 0.542709 | 4.2:+41332321 | MS.gene071169:CDS |
| AATTCAGACCCCACTTATGT+TGG | 0.543384 | 4.2:+41330856 | MS.gene071169:intron |
| CTTATGTTGGCAGCAATGCA+TGG | 0.544992 | 4.2:+41330869 | MS.gene071169:CDS |
| CCTTTAGCTGCTAAATGAAG+AGG | 0.547668 | 4.2:-41331527 | None:intergenic |
| GACTAACCAAGAAGCAGCCA+CGG | 0.550497 | 4.2:-41331139 | None:intergenic |
| GATTGCTTCCGAAAATGAAT+GGG | 0.551989 | 4.2:+41333496 | MS.gene071169:CDS |
| GCATTGCTGCCAACATAAGT+GGG | 0.556318 | 4.2:-41330865 | None:intergenic |
| AAGCAATCATCCCGGAACTA+CGG | 0.559960 | 4.2:-41333481 | None:intergenic |
| GTGAATATTAGAGACGGTAG+AGG | 0.570533 | 4.2:+41331283 | MS.gene071169:CDS |
| GTGGAAAAGTTGCTTGAAGC+TGG | 0.573507 | 4.2:+41330905 | MS.gene071169:CDS |
| ATTGGACGCGAACAGGGAAA+GGG | 0.577168 | 4.2:+41332327 | MS.gene071169:CDS |
| TTAATGTTTGATGTGTGTCA+TGG | 0.578777 | 4.2:+41331036 | MS.gene071169:CDS |
| GCTTCGACAGAATGGACAGA+TGG | 0.579479 | 4.2:-41333282 | None:intergenic |
| ACAGAATGGACAGATGGGTG+GGG | 0.584465 | 4.2:-41333276 | None:intergenic |
| TTGAACCTGGATCTGACCAT+TGG | 0.585236 | 4.2:-41330438 | None:intergenic |
| GGTAGAAACTCACGAAGACA+TGG | 0.587372 | 4.2:+41333331 | MS.gene071169:CDS |
| TGGCAGCAGCAATATGAAGA+GGG | 0.588977 | 4.2:-41330418 | None:intergenic |
| CGACAGAATGGACAGATGGG+TGG | 0.592181 | 4.2:-41333278 | None:intergenic |
| ATCTGGCAGCTCGTCAAAGA+CGG | 0.594811 | 4.2:+41331320 | MS.gene071169:CDS |
| AAGCGCCATATCTAAACTGA+TGG | 0.601000 | 4.2:+41333301 | MS.gene071169:CDS |
| TGACGAGCTGCCAGATGCAA+TGG | 0.602034 | 4.2:-41331313 | None:intergenic |
| GTGCACATTCTGTTGTGTAG+TGG | 0.607255 | 4.2:+41331352 | MS.gene071169:CDS |
| AATGATGATGGCCATACAAG+AGG | 0.608678 | 4.2:-41332250 | None:intergenic |
| TGCTGCTCAATCTAGTCCCG+TGG | 0.608978 | 4.2:+41331122 | MS.gene071169:CDS |
| GCATGGAAAGATTGAATGTG+TGG | 0.610223 | 4.2:+41330886 | MS.gene071169:CDS |
| GCATCCGCGAATTATTAGCA+TGG | 0.610332 | 4.2:+41331564 | MS.gene071169:CDS |
| CGAATTATTAGCATGGGGTG+CGG | 0.613204 | 4.2:+41331571 | MS.gene071169:CDS |
| GGGATGCGAAGTTGAAGTGT+TGG | 0.613230 | 4.2:-41333252 | None:intergenic |
| CTTCATTTAGCAGCTAAAGG+AGG | 0.613756 | 4.2:+41331530 | MS.gene071169:CDS |
| AAATGAAGAGGAGTACTCCC+AGG | 0.616255 | 4.2:-41331515 | None:intergenic |
| CTTCGACAGAATGGACAGAT+GGG | 0.616676 | 4.2:-41333281 | None:intergenic |
| TTGGCAGCAGCAATATGAAG+AGG | 0.619663 | 4.2:-41330419 | None:intergenic |
| ACTAACCAAGAAGCAGCCAC+GGG | 0.627620 | 4.2:-41331138 | None:intergenic |
| AACACTCTGCTGTCACAACA+AGG | 0.631175 | 4.2:+41333229 | MS.gene071169:CDS |
| CGGTTTGTGAATATTAGAGA+CGG | 0.645981 | 4.2:+41331277 | MS.gene071169:CDS |
| TCATCCATTCGATCAGAGTG+TGG | 0.646169 | 4.2:-41332391 | None:intergenic |
| TGCATTGTGCACACATCTGG+TGG | 0.649232 | 4.2:-41333202 | None:intergenic |
| AACAGGTGTCGACATCATTG+TGG | 0.652268 | 4.2:-41333530 | None:intergenic |
| TAGTACGATTGAGAAGAGAA+GGG | 0.656985 | 4.2:-41330376 | None:intergenic |
| AATCAGTGAACTTAATCCAG+AGG | 0.659408 | 4.2:+41332279 | MS.gene071169:CDS |
| GGCAGCAGCAATATGAAGAG+GGG | 0.664522 | 4.2:-41330417 | None:intergenic |
| CACGAAGACATGGATCTAGA+CGG | 0.665249 | 4.2:+41333341 | MS.gene071169:CDS |
| TTTGCTTGGCTTGAAACAAG+TGG | 0.668168 | 4.2:-41333372 | None:intergenic |
| TGTACCCAGATGCATCACGT+TGG | 0.686205 | 4.2:-41331601 | None:intergenic |
| ATCCGCGAATTATTAGCATG+GGG | 0.692205 | 4.2:+41331566 | MS.gene071169:CDS |
| GTTGCTTTGAAGTACAAACA+TGG | 0.699828 | 4.2:+41332190 | MS.gene071169:CDS |
| AAATTTCGTAACATGAACGA+GGG | 0.699839 | 4.2:+41333401 | MS.gene071169:CDS |
| GAAATTTCGTAACATGAACG+AGG | 0.700659 | 4.2:+41333400 | MS.gene071169:CDS |
| CATTGCTGCCAACATAAGTG+GGG | 0.709787 | 4.2:-41330864 | None:intergenic |
| AATGGATGACAACATCTCTG+AGG | 0.710530 | 4.2:+41332405 | MS.gene071169:CDS |
| ATAATTGAAGTCCAAGACTG+TGG | 0.721086 | 4.2:+41333179 | MS.gene071169:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTATGAAAAATTATC+AGG | + | chr4.2:41331011-41331030 | MS.gene071169:intron | 10.0% |
| !! | TATAAATTTAATAAGTTTGT+AGG | - | chr4.2:41332520-41332539 | None:intergenic | 10.0% |
| !!! | GATTATATTTTTCAAATTAT+AGG | - | chr4.2:41331962-41331981 | None:intergenic | 10.0% |
| !!! | TATCTTTAATTGTATTTTTT+TGG | + | chr4.2:41330830-41330849 | MS.gene071169:intron | 10.0% |
| !! | AAAAATATAATCACTTGTTT+CGG | + | chr4.2:41331970-41331989 | MS.gene071169:intron | 15.0% |
| !! | AAACTTATTAAATTTATAGC+AGG | + | chr4.2:41332522-41332541 | MS.gene071169:intron | 15.0% |
| !! | AAATATGTAAACCTATTATT+TGG | + | chr4.2:41331893-41331912 | MS.gene071169:intron | 15.0% |
| !! | TCATAAAATTGAAATAAACA+TGG | - | chr4.2:41330955-41330974 | None:intergenic | 15.0% |
| !!! | CTAATTATTTGGATATTTTT+CGG | + | chr4.2:41332549-41332568 | MS.gene071169:intron | 15.0% |
| !!! | GATTTTAAAACATTTAACAA+TGG | + | chr4.2:41331222-41331241 | MS.gene071169:intron | 15.0% |
| !! | AAAAAATTTCAAAACCCAAT+TGG | - | chr4.2:41330598-41330617 | None:intergenic | 20.0% |
| !! | AAAAATTTCAAAACCCAATT+GGG | - | chr4.2:41330597-41330616 | None:intergenic | 20.0% |
| !! | AAAATTGAAATAAACATGGA+GGG | - | chr4.2:41330951-41330970 | None:intergenic | 20.0% |
| !! | AAGAATACAATTATATTGCA+GGG | + | chr4.2:41331246-41331265 | MS.gene071169:intron | 20.0% |
| !! | TAAAATTGAAATAAACATGG+AGG | - | chr4.2:41330952-41330971 | None:intergenic | 20.0% |
| !! | TCATTAATTTCTTTCCTAAT+TGG | + | chr4.2:41331175-41331194 | MS.gene071169:intron | 20.0% |
| !! | TTTAACTGATCAAAATTAGA+AGG | - | chr4.2:41332616-41332635 | None:intergenic | 20.0% |
| !!! | GATTTGAATTTGGATTTTAA+TGG | + | chr4.2:41330753-41330772 | MS.gene071169:intron | 20.0% |
| !!! | TGTTTGCTATTTTTCAATTT+AGG | + | chr4.2:41332015-41332034 | MS.gene071169:intron | 20.0% |
| !!! | TTTGGATTTTGATTTGAATT+TGG | + | chr4.2:41330743-41330762 | MS.gene071169:intron | 20.0% |
| ! | AAAATTTCAAAACCCAATTG+GGG | - | chr4.2:41330596-41330615 | None:intergenic | 25.0% |
| ! | AACACGAAAAAAGAATGTAA+AGG | - | chr4.2:41330471-41330490 | None:intergenic | 25.0% |
| ! | AAGTAGTAAATTCAAATGGT+TGG | - | chr4.2:41332456-41332475 | None:intergenic | 25.0% |
| ! | AATTAATGACAAAACCGAAA+AGG | - | chr4.2:41331164-41331183 | None:intergenic | 25.0% |
| ! | ACACGAAAAAAGAATGTAAA+GGG | - | chr4.2:41330470-41330489 | None:intergenic | 25.0% |
| ! | ACTTGAAAGTTGAATAAAAC+AGG | - | chr4.2:41332108-41332127 | None:intergenic | 25.0% |
| ! | AGAATACAATTATATTGCAG+GGG | + | chr4.2:41331247-41331266 | MS.gene071169:intron | 25.0% |
| ! | AGCAAAGTAGTAAATTCAAA+TGG | - | chr4.2:41332460-41332479 | None:intergenic | 25.0% |
| ! | AGTTGTAGTAGTAAAATGTA+AGG | + | chr4.2:41331920-41331939 | MS.gene071169:intron | 25.0% |
| ! | CAAGAATACAATTATATTGC+AGG | + | chr4.2:41331245-41331264 | MS.gene071169:intron | 25.0% |
| ! | GAATCATAACAATGTTTCTT+GGG | - | chr4.2:41332052-41332071 | None:intergenic | 25.0% |
| ! | GAATTTACTACTTTGCTTAT+AGG | + | chr4.2:41332463-41332482 | MS.gene071169:intron | 25.0% |
| ! | TACAACTAATGCCAAATAAT+AGG | - | chr4.2:41331907-41331926 | None:intergenic | 25.0% |
| ! | TGAATCATAACAATGTTTCT+TGG | - | chr4.2:41332053-41332072 | None:intergenic | 25.0% |
| ! | TTGTATGATCTATCAATTGT+GGG | - | chr4.2:41331875-41331894 | None:intergenic | 25.0% |
| ! | TTGTCCAATGTAAATTCATT+CGG | + | chr4.2:41333446-41333465 | MS.gene071169:CDS | 25.0% |
| ! | TTTGTATGATCTATCAATTG+TGG | - | chr4.2:41331876-41331895 | None:intergenic | 25.0% |
| !! | AAAGAGATGATAGTTTTCTA+AGG | - | chr4.2:41332769-41332788 | None:intergenic | 25.0% |
| !! | AGACGTTTCGTAATAATTTT+TGG | - | chr4.2:41330540-41330559 | None:intergenic | 25.0% |
| !! | GTTTTATCTAAGCTTTTAGA+TGG | + | chr4.2:41330666-41330685 | MS.gene071169:CDS | 25.0% |
| !! | TTTTCCGAATGAATTTACAT+TGG | - | chr4.2:41333453-41333472 | None:intergenic | 25.0% |
| !!! | GGTGATTTGTTAATGTTATT+TGG | + | chr4.2:41330725-41330744 | MS.gene071169:intron | 25.0% |
| !!! | TCCATTATACATTCACTTTT+GGG | + | chr4.2:41332962-41332981 | MS.gene071169:intron | 25.0% |
| !!! | TGTTGAATCATTTTGTTTTG+TGG | + | chr4.2:41331464-41331483 | MS.gene071169:intron | 25.0% |
| !!! | TTTTTTTTTTGGGAATTTGC+AGG | + | chr4.2:41330644-41330663 | MS.gene071169:intron | 25.0% |
| AAAATGTAAGGAAGTCTCTA+AGG | + | chr4.2:41331932-41331951 | MS.gene071169:intron | 30.0% | |
| AAATTTCGTAACATGAACGA+GGG | + | chr4.2:41333401-41333420 | MS.gene071169:CDS | 30.0% | |
| AATTCATTCGGAAAAATGAG+CGG | + | chr4.2:41333458-41333477 | MS.gene071169:CDS | 30.0% | |
| ACTGTATCATCTCAAGTTAA+CGG | - | chr4.2:41331744-41331763 | None:intergenic | 30.0% | |
| AGGGAGAAAAACATATTGAA+AGG | + | chr4.2:41332346-41332365 | MS.gene071169:CDS | 30.0% | |
| ATAAAACACACACAGTTTGA+AGG | - | chr4.2:41332150-41332169 | None:intergenic | 30.0% | |
| ATATAATCACTTGTTTCGGT+AGG | + | chr4.2:41331974-41331993 | MS.gene071169:intron | 30.0% | |
| ATCTAAACTGATGGTTATCA+AGG | + | chr4.2:41333310-41333329 | MS.gene071169:CDS | 30.0% | |
| CTGATTATCTTCAATGATGA+TGG | - | chr4.2:41332265-41332284 | None:intergenic | 30.0% | |
| GAATACAATTATATTGCAGG+GGG | + | chr4.2:41331248-41331267 | MS.gene071169:intron | 30.0% | |
| GATAACCATCAGTTTAGATA+TGG | - | chr4.2:41333309-41333328 | None:intergenic | 30.0% | |
| TAACAATGTTTCTTGGGATA+AGG | - | chr4.2:41332046-41332065 | None:intergenic | 30.0% | |
| TACAGCAATGCAAATGTAAA+GGG | - | chr4.2:41333030-41333049 | None:intergenic | 30.0% | |
| TAGCAGGAAGTCTAATTATT+TGG | + | chr4.2:41332538-41332557 | MS.gene071169:intron | 30.0% | |
| TCTAATAAAACTTTAGCCTC+TGG | - | chr4.2:41332298-41332317 | None:intergenic | 30.0% | |
| TTAATGTTTGATGTGTGTCA+TGG | + | chr4.2:41331036-41331055 | MS.gene071169:CDS | 30.0% | |
| TTACAGCAATGCAAATGTAA+AGG | - | chr4.2:41333031-41333050 | None:intergenic | 30.0% | |
| TTATTACGAAACGTCTTAGA+TGG | + | chr4.2:41330544-41330563 | MS.gene071169:intron | 30.0% | |
| TTTATTAGAGCAGGCATTAT+TGG | + | chr4.2:41332309-41332328 | MS.gene071169:CDS | 30.0% | |
| ! | ATCATCAACCCATTCATTTT+CGG | - | chr4.2:41333507-41333526 | None:intergenic | 30.0% |
| ! | CGAGATCTAATGTAATTTTC+AGG | + | chr4.2:41333112-41333131 | MS.gene071169:intron | 30.0% |
| ! | CTTTCCTAATTGGTTCATAT+CGG | + | chr4.2:41331185-41331204 | MS.gene071169:intron | 30.0% |
| ! | GTCCATTATACATTCACTTT+TGG | + | chr4.2:41332961-41332980 | MS.gene071169:intron | 30.0% |
| !! | AATGGTTGGTAAGAAATCAA+AGG | - | chr4.2:41332442-41332461 | None:intergenic | 30.0% |
| !! | ATGGTTGGTAAGAAATCAAA+GGG | - | chr4.2:41332441-41332460 | None:intergenic | 30.0% |
| !! | CCATTATACATTCACTTTTG+GGG | + | chr4.2:41332963-41332982 | MS.gene071169:intron | 30.0% |
| !! | TGAAGATTTTTATTTCTCGC+TGG | - | chr4.2:41333058-41333077 | None:intergenic | 30.0% |
| AACTCTGAGCTATTTGTCTT+TGG | + | chr4.2:41332654-41332673 | MS.gene071169:intron | 35.0% | |
| AACTTGAGATTGAACTGTTG+AGG | + | chr4.2:41331810-41331829 | MS.gene071169:intron | 35.0% | |
| AATCAGTGAACTTAATCCAG+AGG | + | chr4.2:41332279-41332298 | MS.gene071169:CDS | 35.0% | |
| ACATAGATTACAAGTCAGAG+AGG | - | chr4.2:41333004-41333023 | None:intergenic | 35.0% | |
| ATAATTGAAGTCCAAGACTG+TGG | + | chr4.2:41333179-41333198 | MS.gene071169:CDS | 35.0% | |
| ATCACCGATATGAACCAATT+AGG | - | chr4.2:41331192-41331211 | None:intergenic | 35.0% | |
| ATCATCTCCGAATTATCAGA+TGG | - | chr4.2:41330504-41330523 | None:intergenic | 35.0% | |
| ATCATCTCTTTACCATCTGT+AGG | + | chr4.2:41332778-41332797 | MS.gene071169:intron | 35.0% | |
| ATCTCACCAATGATGATCAA+TGG | + | chr4.2:41331662-41331681 | MS.gene071169:intron | 35.0% | |
| ATTGGTGAGATCTTATCAAG+TGG | - | chr4.2:41331653-41331672 | None:intergenic | 35.0% | |
| CCAAATCCATTGATCATCAT+TGG | - | chr4.2:41331671-41331690 | None:intergenic | 35.0% | |
| CCCCAAAAGTGAATGTATAA+TGG | - | chr4.2:41332966-41332985 | None:intergenic | 35.0% | |
| CGGTTTGTGAATATTAGAGA+CGG | + | chr4.2:41331277-41331296 | MS.gene071169:CDS | 35.0% | |
| CTCGCAATAAGTATATAGTG+TGG | - | chr4.2:41333096-41333115 | None:intergenic | 35.0% | |
| GAAATTTCGTAACATGAACG+AGG | + | chr4.2:41333400-41333419 | MS.gene071169:CDS | 35.0% | |
| GAGTTTATGCATAATTCGAC+AGG | - | chr4.2:41332639-41332658 | None:intergenic | 35.0% | |
| GATCTATCAATTGTGGGATT+TGG | - | chr4.2:41331869-41331888 | None:intergenic | 35.0% | |
| GATTGCTTCCGAAAATGAAT+GGG | + | chr4.2:41333496-41333515 | MS.gene071169:CDS | 35.0% | |
| GGTGCAGTTGAATTGAATTA+TGG | + | chr4.2:41332484-41332503 | MS.gene071169:intron | 35.0% | |
| TAAAGGGAAAAGATTGAACC+TGG | - | chr4.2:41330454-41330473 | None:intergenic | 35.0% | |
| TACTTCAAAGCAACCACATA+TGG | - | chr4.2:41332184-41332203 | None:intergenic | 35.0% | |
| TAGTACGATTGAGAAGAGAA+GGG | - | chr4.2:41330379-41330398 | None:intergenic | 35.0% | |
| TCTAAGCCTAAAAGGTAAGT+GGG | - | chr4.2:41332715-41332734 | None:intergenic | 35.0% | |
| TGATTGCTTCCGAAAATGAA+TGG | + | chr4.2:41333495-41333514 | MS.gene071169:CDS | 35.0% | |
| TGGAAAGAATTGAATGTGTG+TGG | + | chr4.2:41330773-41330792 | MS.gene071169:intron | 35.0% | |
| TGGATTTGGATTTCCTATGA+AGG | + | chr4.2:41331682-41331701 | MS.gene071169:intron | 35.0% | |
| ! | AAACAAGAGCACAATAGGAA+AGG | - | chr4.2:41332000-41332019 | None:intergenic | 35.0% |
| ! | AAACTGTGTGTGTTTTATGC+AGG | + | chr4.2:41332152-41332171 | MS.gene071169:intron | 35.0% |
| ! | ATAGCAAACAAGAGCACAAT+AGG | - | chr4.2:41332005-41332024 | None:intergenic | 35.0% |
| ! | CCAATGATGATCAATGGATT+TGG | + | chr4.2:41331668-41331687 | MS.gene071169:intron | 35.0% |
| ! | TTGCATTATGCTGCTTACTA+TGG | + | chr4.2:41331069-41331088 | MS.gene071169:CDS | 35.0% |
| !! | CGAAATTTCCTTGATTTGCT+TGG | - | chr4.2:41333389-41333408 | None:intergenic | 35.0% |
| !! | GTTGCTTTGAAGTACAAACA+TGG | + | chr4.2:41332190-41332209 | MS.gene071169:CDS | 35.0% |
| !!! | GGCTAAAGTTTTATTAGAGC+AGG | + | chr4.2:41332300-41332319 | MS.gene071169:CDS | 35.0% |
| !!! | TAATTTTCAGGTTAGCGAGA+CGG | + | chr4.2:41333124-41333143 | MS.gene071169:intron | 35.0% |
| !!! | TTTTGTCGATTCAACACATC+TGG | - | chr4.2:41330702-41330721 | None:intergenic | 35.0% |
| AAAACCCAATTGGGGAACTT+GGG | - | chr4.2:41330588-41330607 | None:intergenic | 40.0% | |
| AACAGAATGTGCACACATTC+AGG | - | chr4.2:41331346-41331365 | None:intergenic | 40.0% | |
| AACGATGAGTCTGATAAGCT+TGG | + | chr4.2:41331429-41331448 | MS.gene071169:intron | 40.0% | |
| AAGCGCCATATCTAAACTGA+TGG | + | chr4.2:41333301-41333320 | MS.gene071169:CDS | 40.0% | |
| AATGGATGACAACATCTCTG+AGG | + | chr4.2:41332405-41332424 | MS.gene071169:CDS | 40.0% | |
| AATTCAGACCCCACTTATGT+TGG | + | chr4.2:41330856-41330875 | MS.gene071169:intron | 40.0% | |
| ATCCGCGAATTATTAGCATG+GGG | + | chr4.2:41331566-41331585 | MS.gene071169:CDS | 40.0% | |
| CATCCGCGAATTATTAGCAT+GGG | + | chr4.2:41331565-41331584 | MS.gene071169:CDS | 40.0% | |
| CCTCTTCATTTAGCAGCTAA+AGG | + | chr4.2:41331527-41331546 | MS.gene071169:CDS | 40.0% | |
| CCTTTAGCTGCTAAATGAAG+AGG | - | chr4.2:41331530-41331549 | None:intergenic | 40.0% | |
| CGATCATCATCATGTCAAAC+AGG | + | chr4.2:41332836-41332855 | MS.gene071169:intron | 40.0% | |
| CTCTAAGCCTAAAAGGTAAG+TGG | - | chr4.2:41332716-41332735 | None:intergenic | 40.0% | |
| CTTCATTTAGCAGCTAAAGG+AGG | + | chr4.2:41331530-41331549 | MS.gene071169:CDS | 40.0% | |
| GCATGGAAAGATTGAATGTG+TGG | + | chr4.2:41330886-41330905 | MS.gene071169:CDS | 40.0% | |
| GCTATATTTGCAGATGTCCT+GGG | + | chr4.2:41331498-41331517 | MS.gene071169:intron | 40.0% | |
| GGTAACTTCTAACCTACAGA+TGG | - | chr4.2:41332793-41332812 | None:intergenic | 40.0% | |
| GTAGTACGATTGAGAAGAGA+AGG | - | chr4.2:41330380-41330399 | None:intergenic | 40.0% | |
| GTGAATATTAGAGACGGTAG+AGG | + | chr4.2:41331283-41331302 | MS.gene071169:CDS | 40.0% | |
| GTGCTTCAACTAGCAGATAT+GGG | + | chr4.2:41331386-41331405 | MS.gene071169:CDS | 40.0% | |
| GTTTCAAGCCAAGCAAATCA+AGG | + | chr4.2:41333378-41333397 | MS.gene071169:CDS | 40.0% | |
| TAGATTACAAGTCAGAGAGG+CGG | - | chr4.2:41333001-41333020 | None:intergenic | 40.0% | |
| TCTCCGAATTATCAGATGGA+CGG | - | chr4.2:41330500-41330519 | None:intergenic | 40.0% | |
| TGCTATATTTGCAGATGTCC+TGG | + | chr4.2:41331497-41331516 | MS.gene071169:intron | 40.0% | |
| TGGTCATTCTTCTTGCCTTA+AGG | + | chr4.2:41331089-41331108 | MS.gene071169:CDS | 40.0% | |
| TGTGCTTCAACTAGCAGATA+TGG | + | chr4.2:41331385-41331404 | MS.gene071169:CDS | 40.0% | |
| TGTGTTGAATCGACAAAAGC+AGG | + | chr4.2:41330704-41330723 | MS.gene071169:CDS | 40.0% | |
| ! | ACATGATGATGATCGCTTGA+TGG | - | chr4.2:41332831-41332850 | None:intergenic | 40.0% |
| ! | ATTTTCGGAAGCAATCATCC+CGG | - | chr4.2:41333492-41333511 | None:intergenic | 40.0% |
| ! | CATGATGATGATCGCTTGAT+GGG | - | chr4.2:41332830-41332849 | None:intergenic | 40.0% |
| ! | TACCTTTTAGGCTTAGAGCT+CGG | + | chr4.2:41332718-41332737 | MS.gene071169:intron | 40.0% |
| ! | TTTGCTTGGCTTGAAACAAG+TGG | - | chr4.2:41333375-41333394 | None:intergenic | 40.0% |
| !! | AATGATGATGGCCATACAAG+AGG | - | chr4.2:41332253-41332272 | None:intergenic | 40.0% |
| !! | CAGCAGAAAGTATTGCCTTA+AGG | - | chr4.2:41331107-41331126 | None:intergenic | 40.0% |
| !! | GACAACATCTCTGAGGTAAT+TGG | + | chr4.2:41332412-41332431 | MS.gene071169:intron | 40.0% |
| !! | GCTTCTTGGTTAGTCCTTTT+CGG | + | chr4.2:41331147-41331166 | MS.gene071169:intron | 40.0% |
| AACACTCTGCTGTCACAACA+AGG | + | chr4.2:41333229-41333248 | MS.gene071169:CDS | 45.0% | |
| AAGCAATCATCCCGGAACTA+CGG | - | chr4.2:41333484-41333503 | None:intergenic | 45.0% | |
| ATCTCCACACTCTGATCGAA+TGG | + | chr4.2:41332387-41332406 | MS.gene071169:CDS | 45.0% | |
| ATTCGATCAGAGTGTGGAGA+TGG | - | chr4.2:41332388-41332407 | None:intergenic | 45.0% | |
| CAAAACCCAATTGGGGAACT+TGG | - | chr4.2:41330589-41330608 | None:intergenic | 45.0% | |
| CACCCCATGCTAATAATTCG+CGG | - | chr4.2:41331571-41331590 | None:intergenic | 45.0% | |
| CACGAAGACATGGATCTAGA+CGG | + | chr4.2:41333341-41333360 | MS.gene071169:CDS | 45.0% | |
| CATTGCTGCCAACATAAGTG+GGG | - | chr4.2:41330867-41330886 | None:intergenic | 45.0% | |
| CCTCCGTCCATCTGATAATT+CGG | + | chr4.2:41330494-41330513 | MS.gene071169:intron | 45.0% | |
| CGAATTATTAGCATGGGGTG+CGG | + | chr4.2:41331571-41331590 | MS.gene071169:CDS | 45.0% | |
| CTTATGTTGGCAGCAATGCA+TGG | + | chr4.2:41330869-41330888 | MS.gene071169:CDS | 45.0% | |
| CTTCATATTGCTGCTGCCAA+TGG | + | chr4.2:41330422-41330441 | MS.gene071169:CDS | 45.0% | |
| CTTCGACAGAATGGACAGAT+GGG | - | chr4.2:41333284-41333303 | None:intergenic | 45.0% | |
| GAAGTTACCAATGCGTGTAG+CGG | + | chr4.2:41332804-41332823 | MS.gene071169:intron | 45.0% | |
| GCATCCGCGAATTATTAGCA+TGG | + | chr4.2:41331564-41331583 | MS.gene071169:CDS | 45.0% | |
| GCATTGCTGCCAACATAAGT+GGG | - | chr4.2:41330868-41330887 | None:intergenic | 45.0% | |
| GGTAGAAACTCACGAAGACA+TGG | + | chr4.2:41333331-41333350 | MS.gene071169:CDS | 45.0% | |
| GTGCACATTCTGTTGTGTAG+TGG | + | chr4.2:41331352-41331371 | MS.gene071169:CDS | 45.0% | |
| GTGGAAAAGTTGCTTGAAGC+TGG | + | chr4.2:41330905-41330924 | MS.gene071169:CDS | 45.0% | |
| TATATTGCAGGGGGTTTGCA+CGG | + | chr4.2:41331257-41331276 | MS.gene071169:intron | 45.0% | |
| TCATCCATTCGATCAGAGTG+TGG | - | chr4.2:41332394-41332413 | None:intergenic | 45.0% | |
| TGCATTGCTGCCAACATAAG+TGG | - | chr4.2:41330869-41330888 | None:intergenic | 45.0% | |
| TGGCAGCAGCAATATGAAGA+GGG | - | chr4.2:41330421-41330440 | None:intergenic | 45.0% | |
| TGTGGAGATGGAAGAGAGTA+AGG | - | chr4.2:41332376-41332395 | None:intergenic | 45.0% | |
| TTGAACCTGGATCTGACCAT+TGG | - | chr4.2:41330441-41330460 | None:intergenic | 45.0% | |
| TTGGCAGCAGCAATATGAAG+AGG | - | chr4.2:41330422-41330441 | None:intergenic | 45.0% | |
| ! | ACCTTTTAGGCTTAGAGCTC+GGG | + | chr4.2:41332719-41332738 | MS.gene071169:intron | 45.0% |
| ! | CTGTGTGTGTTTTATGCAGG+CGG | + | chr4.2:41332155-41332174 | MS.gene071169:intron | 45.0% |
| ! | GTCAAGCCCACTTACCTTTT+AGG | + | chr4.2:41332706-41332725 | MS.gene071169:intron | 45.0% |
| ! | TCTAAGGTAGCTCGTTGAGA+TGG | - | chr4.2:41332753-41332772 | None:intergenic | 45.0% |
| !! | AAATGAAGAGGAGTACTCCC+AGG | - | chr4.2:41331518-41331537 | None:intergenic | 45.0% |
| !!! | CAGCGTGCTTTTTCCTTCAT+AGG | - | chr4.2:41331698-41331717 | None:intergenic | 45.0% |
| !!! | AAAATTTGATTTTTTTTTTT+TGG | + | chr4.2:41330633-41330652 | MS.gene071169:intron | 5.0% |
| !!! | AAATTTGATTTTTTTTTTTT+GGG | + | chr4.2:41330634-41330653 | MS.gene071169:intron | 5.0% |
| AAAATGAGCGGCCGTAGTTC+CGG | + | chr4.2:41333470-41333489 | MS.gene071169:CDS | 50.0% | |
| ACAGAATGGACAGATGGGTG+GGG | - | chr4.2:41333279-41333298 | None:intergenic | 50.0% | |
| ACTAACCAAGAAGCAGCCAC+GGG | - | chr4.2:41331141-41331160 | None:intergenic | 50.0% | |
| AGGCATTATTGGACGCGAAC+AGG | + | chr4.2:41332320-41332339 | MS.gene071169:CDS | 50.0% | |
| ATCTGGCAGCTCGTCAAAGA+CGG | + | chr4.2:41331320-41331339 | MS.gene071169:CDS | 50.0% | |
| ATGCAGGCGGATACCATATG+TGG | + | chr4.2:41332168-41332187 | MS.gene071169:intron | 50.0% | |
| ATTGGACGCGAACAGGGAAA+GGG | + | chr4.2:41332327-41332346 | MS.gene071169:CDS | 50.0% | |
| CATCTGCACAGCCTCTTGTA+TGG | + | chr4.2:41332239-41332258 | MS.gene071169:CDS | 50.0% | |
| CCGAATTATCAGATGGACGG+AGG | - | chr4.2:41330497-41330516 | None:intergenic | 50.0% | |
| GACAGAATGGACAGATGGGT+GGG | - | chr4.2:41333280-41333299 | None:intergenic | 50.0% | |
| GACTAACCAAGAAGCAGCCA+CGG | - | chr4.2:41331142-41331161 | None:intergenic | 50.0% | |
| GATATGGCGCTTCGACAGAA+TGG | - | chr4.2:41333293-41333312 | None:intergenic | 50.0% | |
| GCTTCGACAGAATGGACAGA+TGG | - | chr4.2:41333285-41333304 | None:intergenic | 50.0% | |
| GGCAGCAGCAATATGAAGAG+GGG | - | chr4.2:41330420-41330439 | None:intergenic | 50.0% | |
| GGCATTATTGGACGCGAACA+GGG | + | chr4.2:41332321-41332340 | MS.gene071169:CDS | 50.0% | |
| GGCTTGACTAAGTCGTTACC+CGG | - | chr4.2:41332694-41332713 | None:intergenic | 50.0% | |
| GGGATGCGAAGTTGAAGTGT+TGG | - | chr4.2:41333255-41333274 | None:intergenic | 50.0% | |
| GGTAGCAGCAGCAGTTTCAA+GGG | + | chr4.2:41333422-41333441 | MS.gene071169:CDS | 50.0% | |
| GTCTCCAACGTGATGCATCT+GGG | + | chr4.2:41331597-41331616 | MS.gene071169:CDS | 50.0% | |
| GTGTGCATTGTGCACACATC+TGG | - | chr4.2:41333208-41333227 | None:intergenic | 50.0% | |
| TATTGGACGCGAACAGGGAA+AGG | + | chr4.2:41332326-41332345 | MS.gene071169:CDS | 50.0% | |
| TGAGCCCAAGTTCCCCAATT+GGG | + | chr4.2:41330581-41330600 | MS.gene071169:intron | 50.0% | |
| TGCATTGTGCACACATCTGG+TGG | - | chr4.2:41333205-41333224 | None:intergenic | 50.0% | |
| TGTACCCAGATGCATCACGT+TGG | - | chr4.2:41331604-41331623 | None:intergenic | 50.0% | |
| TTGAGCCCAAGTTCCCCAAT+TGG | + | chr4.2:41330580-41330599 | MS.gene071169:intron | 50.0% | |
| TTGGGGAACTTGGGCTCAAA+TGG | - | chr4.2:41330579-41330598 | None:intergenic | 50.0% | |
| ! | AGGTGCTACACCATTGCATC+TGG | + | chr4.2:41331303-41331322 | MS.gene071169:CDS | 50.0% |
| ! | ATGCTGCATCTGCTTTGAGC+AGG | + | chr4.2:41333151-41333170 | MS.gene071169:CDS | 50.0% |
| ! | CCTTTTAGGCTTAGAGCTCG+GGG | + | chr4.2:41332720-41332739 | MS.gene071169:intron | 50.0% |
| AAATGAGCGGCCGTAGTTCC+GGG | + | chr4.2:41333471-41333490 | MS.gene071169:CDS | 55.0% | |
| AATGGACAGATGGGTGGGGT+GGG | - | chr4.2:41333275-41333294 | None:intergenic | 55.0% | |
| ACATCTGGTGGCCACAGTCT+TGG | - | chr4.2:41333193-41333212 | None:intergenic | 55.0% | |
| CGACAGAATGGACAGATGGG+TGG | - | chr4.2:41333281-41333300 | None:intergenic | 55.0% | |
| CGTCTCCAACGTGATGCATC+TGG | + | chr4.2:41331596-41331615 | MS.gene071169:CDS | 55.0% | |
| GACTAAGTCGTTACCCGGCT+GGG | - | chr4.2:41332689-41332708 | None:intergenic | 55.0% | |
| GGGTAGCAGCAGCAGTTTCA+AGG | + | chr4.2:41333421-41333440 | MS.gene071169:CDS | 55.0% | |
| TGACGAGCTGCCAGATGCAA+TGG | - | chr4.2:41331316-41331335 | None:intergenic | 55.0% | |
| TGACTAAGTCGTTACCCGGC+TGG | - | chr4.2:41332690-41332709 | None:intergenic | 55.0% | |
| TGCTGCCAATGGTCAGATCC+AGG | + | chr4.2:41330433-41330452 | MS.gene071169:CDS | 55.0% | |
| TGCTGCTCAATCTAGTCCCG+TGG | + | chr4.2:41331122-41331141 | MS.gene071169:CDS | 55.0% | |
| !! | CCCCGAGCTCTAAGCCTAAA+AGG | - | chr4.2:41332723-41332742 | None:intergenic | 55.0% |
| CTAGTCCCGTGGCTGCTTCT+TGG | + | chr4.2:41331133-41331152 | MS.gene071169:CDS | 60.0% | |
| GAATGGACAGATGGGTGGGG+TGG | - | chr4.2:41333276-41333295 | None:intergenic | 60.0% | |
| ! | TGATGGGCCGCTACACGCAT+TGG | - | chr4.2:41332814-41332833 | None:intergenic | 60.0% |
| !! | TTTGGCTCTGCTGTCCCAGC+CGG | + | chr4.2:41332672-41332691 | MS.gene071169:intron | 60.0% |
| !! | TTGGCTCTGCTGTCCCAGCC+GGG | + | chr4.2:41332673-41332692 | MS.gene071169:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 41330371 | 41333538 | 41330371 | ID=MS.gene071169 |
| chr4.2 | mRNA | 41330371 | 41333538 | 41330371 | ID=MS.gene071169.t1;Parent=MS.gene071169 |
| chr4.2 | exon | 41330371 | 41330454 | 41330371 | ID=MS.gene071169.t1.exon1;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41330371 | 41330454 | 41330371 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| chr4.2 | exon | 41330666 | 41330725 | 41330666 | ID=MS.gene071169.t1.exon2;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41330666 | 41330725 | 41330666 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| chr4.2 | exon | 41330863 | 41330934 | 41330863 | ID=MS.gene071169.t1.exon3;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41330863 | 41330934 | 41330863 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| chr4.2 | exon | 41331033 | 41331154 | 41331033 | ID=MS.gene071169.t1.exon4;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41331033 | 41331154 | 41331033 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| chr4.2 | exon | 41331267 | 41331407 | 41331267 | ID=MS.gene071169.t1.exon5;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41331267 | 41331407 | 41331267 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| chr4.2 | exon | 41331511 | 41331618 | 41331511 | ID=MS.gene071169.t1.exon6;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41331511 | 41331618 | 41331511 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| chr4.2 | exon | 41332174 | 41332426 | 41332174 | ID=MS.gene071169.t1.exon7;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41332174 | 41332426 | 41332174 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| chr4.2 | exon | 41333134 | 41333538 | 41333134 | ID=MS.gene071169.t1.exon8;Parent=MS.gene071169.t1 |
| chr4.2 | CDS | 41333134 | 41333538 | 41333134 | ID=cds.MS.gene071169.t1;Parent=MS.gene071169.t1 |
| Gene Sequence |
| Protein sequence |
