Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021114.t1 | XP_013456116.1 | 98 | 447 | 9 | 0 | 1 | 447 | 1 | 447 | 2.10E-219 | 771.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021114.t1 | Q94B55 | 63.2 | 454 | 154 | 3 | 1 | 443 | 1 | 452 | 7.6e-138 | 491.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021114.t1 | A0A072UKA7 | 98.0 | 447 | 9 | 0 | 1 | 447 | 1 | 447 | 1.5e-219 | 771.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021114.t1 | MTR_4g063830 | 98.210 | 447 | 8 | 0 | 1 | 447 | 1 | 447 | 0.0 | 912 |
| MS.gene021114.t1 | MTR_2g096760 | 75.168 | 447 | 105 | 5 | 1 | 445 | 1 | 443 | 0.0 | 695 |
| MS.gene021114.t1 | MTR_4g021880 | 60.134 | 449 | 165 | 6 | 1 | 440 | 80 | 523 | 5.07e-180 | 513 |
| MS.gene021114.t1 | MTR_4g021880 | 60.651 | 338 | 126 | 3 | 1 | 331 | 80 | 417 | 7.03e-134 | 392 |
| MS.gene021114.t1 | MTR_0020s0130 | 33.499 | 403 | 206 | 13 | 1 | 372 | 1 | 372 | 7.54e-46 | 166 |
| MS.gene021114.t1 | MTR_1g100797 | 31.204 | 407 | 218 | 13 | 1 | 376 | 1 | 376 | 5.93e-41 | 153 |
| MS.gene021114.t1 | MTR_4g129470 | 30.303 | 396 | 221 | 9 | 6 | 376 | 11 | 376 | 1.91e-37 | 143 |
| MS.gene021114.t1 | MTR_4g129470 | 29.968 | 317 | 168 | 8 | 85 | 376 | 1 | 288 | 3.64e-24 | 104 |
| MS.gene021114.t1 | MTR_1g100797 | 29.412 | 306 | 164 | 11 | 81 | 376 | 9 | 272 | 8.08e-23 | 100 |
| MS.gene021114.t1 | MTR_1g115575 | 31.731 | 208 | 121 | 8 | 13 | 216 | 132 | 322 | 3.24e-16 | 81.3 |
| MS.gene021114.t1 | MTR_7g100390 | 30.000 | 210 | 126 | 6 | 11 | 216 | 48 | 240 | 1.57e-15 | 79.0 |
| MS.gene021114.t1 | MTR_7g117620 | 30.603 | 232 | 139 | 6 | 13 | 239 | 82 | 296 | 1.41e-14 | 76.3 |
| MS.gene021114.t1 | MTR_1g112830 | 26.383 | 235 | 153 | 5 | 1 | 232 | 124 | 341 | 3.34e-14 | 75.1 |
| MS.gene021114.t1 | MTR_2g096190 | 28.019 | 207 | 130 | 5 | 13 | 216 | 67 | 257 | 6.88e-14 | 73.9 |
| MS.gene021114.t1 | MTR_5g043640 | 31.818 | 220 | 130 | 4 | 13 | 229 | 20 | 222 | 9.28e-14 | 71.2 |
| MS.gene021114.t1 | MTR_4g062100 | 23.263 | 331 | 222 | 8 | 13 | 330 | 71 | 382 | 2.04e-12 | 69.3 |
| MS.gene021114.t1 | MTR_6g027840 | 29.000 | 200 | 126 | 4 | 51 | 250 | 181 | 364 | 1.57e-11 | 66.6 |
| MS.gene021114.t1 | MTR_7g115280 | 27.076 | 277 | 165 | 8 | 51 | 296 | 59 | 329 | 5.19e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021114.t1 | AT2G28840 | 68.053 | 457 | 132 | 5 | 1 | 446 | 1 | 454 | 0.0 | 629 |
| MS.gene021114.t1 | AT2G28840 | 70.207 | 386 | 102 | 4 | 72 | 446 | 57 | 440 | 0.0 | 554 |
| MS.gene021114.t1 | AT5G07270 | 31.707 | 410 | 229 | 10 | 1 | 388 | 1 | 381 | 3.13e-43 | 159 |
| MS.gene021114.t1 | AT5G57740 | 29.695 | 394 | 221 | 10 | 6 | 372 | 11 | 375 | 1.39e-31 | 127 |
| MS.gene021114.t1 | AT5G02620 | 27.381 | 336 | 200 | 12 | 11 | 328 | 55 | 364 | 2.03e-19 | 91.3 |
| MS.gene021114.t1 | AT5G02620 | 27.381 | 336 | 200 | 12 | 11 | 328 | 55 | 364 | 2.03e-19 | 91.3 |
| MS.gene021114.t1 | AT5G02620 | 27.381 | 336 | 200 | 12 | 11 | 328 | 55 | 364 | 2.03e-19 | 91.3 |
| MS.gene021114.t1 | AT5G60070 | 26.786 | 336 | 207 | 12 | 13 | 330 | 74 | 388 | 3.85e-18 | 87.4 |
| MS.gene021114.t1 | AT5G60070 | 29.187 | 209 | 127 | 4 | 16 | 216 | 36 | 231 | 8.69e-13 | 70.9 |
| MS.gene021114.t1 | AT5G02620 | 30.583 | 206 | 122 | 5 | 11 | 212 | 55 | 243 | 8.55e-18 | 86.3 |
| MS.gene021114.t1 | AT5G02620 | 30.583 | 206 | 122 | 5 | 11 | 212 | 55 | 243 | 8.55e-18 | 86.3 |
| MS.gene021114.t1 | AT3G12360 | 31.674 | 221 | 127 | 10 | 13 | 226 | 118 | 321 | 1.84e-15 | 79.0 |
| MS.gene021114.t1 | AT3G12360 | 31.674 | 221 | 127 | 10 | 13 | 226 | 130 | 333 | 1.85e-15 | 79.0 |
| MS.gene021114.t1 | AT1G07710 | 26.409 | 337 | 207 | 12 | 11 | 330 | 65 | 377 | 6.57e-15 | 77.4 |
| MS.gene021114.t1 | AT1G07710 | 26.409 | 337 | 207 | 12 | 11 | 330 | 65 | 377 | 6.57e-15 | 77.4 |
| MS.gene021114.t1 | AT5G20350 | 26.613 | 248 | 159 | 6 | 7 | 248 | 22 | 252 | 2.48e-14 | 75.5 |
| MS.gene021114.t1 | AT3G04710 | 32.093 | 215 | 103 | 6 | 51 | 236 | 59 | 259 | 2.59e-14 | 75.1 |
| MS.gene021114.t1 | AT3G04710 | 32.093 | 215 | 103 | 6 | 51 | 236 | 283 | 483 | 3.61e-14 | 75.1 |
| MS.gene021114.t1 | AT3G04710 | 28.625 | 269 | 137 | 7 | 51 | 290 | 59 | 301 | 2.04e-13 | 72.4 |
| MS.gene021114.t1 | AT5G13530 | 25.592 | 211 | 133 | 5 | 16 | 216 | 472 | 668 | 1.76e-12 | 70.5 |
| MS.gene021114.t1 | AT5G13530 | 25.592 | 211 | 133 | 5 | 16 | 216 | 472 | 668 | 1.80e-12 | 70.5 |
| MS.gene021114.t1 | AT2G31820 | 26.749 | 243 | 162 | 6 | 13 | 253 | 190 | 418 | 3.09e-12 | 69.3 |
| MS.gene021114.t1 | AT3G24530 | 32.895 | 152 | 88 | 4 | 23 | 169 | 26 | 168 | 6.03e-12 | 67.8 |
Find 104 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTAGAGCAGGCCTTAT+TGG | 0.254482 | 4.4:-42213413 | MS.gene021114:CDS |
| CTAGTCCCGTGGCTGCTTCT+TGG | 0.292776 | 4.4:-42214587 | MS.gene021114:intron |
| AAAATGAGCGGCCGTAGTTC+CGG | 0.300237 | 4.4:-42212252 | MS.gene021114:CDS |
| TGTGCTTCAACTAGCAGATA+TGG | 0.305279 | 4.4:-42214335 | MS.gene021114:CDS |
| TTCCCTGTTCGCGTCCAATA+AGG | 0.329855 | 4.4:+42213399 | None:intergenic |
| CGTCTCCAACGTGATGCATC+TGG | 0.332475 | 4.4:-42214124 | MS.gene021114:CDS |
| TGGTCATTCTTCTTGCCTTA+AGG | 0.368140 | 4.4:-42214631 | MS.gene021114:CDS |
| AGGCCTTATTGGACGCGAAC+AGG | 0.370869 | 4.4:-42213402 | MS.gene021114:CDS |
| GATAACCATCAGTTTAGATA+TGG | 0.374202 | 4.4:+42212416 | None:intergenic |
| TGTGGAGATGGAAGAGAGTA+AGG | 0.374735 | 4.4:+42213349 | None:intergenic |
| AAATGAGCGGCCGTAGTTCC+GGG | 0.375798 | 4.4:-42212251 | MS.gene021114:CDS |
| CGAAATTTCCTTGATTTGCT+TGG | 0.378282 | 4.4:+42212336 | None:intergenic |
| TTGCATTATGCTGCTTACTA+TGG | 0.392266 | 4.4:-42214651 | MS.gene021114:CDS |
| TACTTCAAAGCAACCACATA+TGG | 0.395193 | 4.4:+42213541 | None:intergenic |
| AACAGAATGTGCACACATTC+AGG | 0.420204 | 4.4:+42214377 | None:intergenic |
| CATCTGCACAGCCTCTTGTA+TGG | 0.420700 | 4.4:-42213483 | MS.gene021114:CDS |
| TTGTCCAATGTAAATTCATT+CGG | 0.426931 | 4.4:-42212276 | MS.gene021114:CDS |
| CCTCTTCATTTAGCAGCTAA+AGG | 0.427567 | 4.4:-42214193 | MS.gene021114:CDS |
| CTGATTATCTTCAATGATGA+TGG | 0.429013 | 4.4:+42213460 | None:intergenic |
| GGGTAGCAGCAGCAGTTTCA+AGG | 0.445286 | 4.4:-42212301 | MS.gene021114:CDS |
| AGGTGCTACACCATTGCATC+TGG | 0.451079 | 4.4:-42214417 | MS.gene021114:CDS |
| TGATTGCTTCCGAAAATGAA+TGG | 0.451396 | 4.4:-42212227 | MS.gene021114:CDS |
| ACATCTGGTGGCCACAGTCT+TGG | 0.456216 | 4.4:+42212532 | None:intergenic |
| TCTAATAAAACTTTAGCCTC+TGG | 0.458151 | 4.4:+42213427 | None:intergenic |
| TGCTATATTTGCAGATGTCC+TGG | 0.458321 | 4.4:-42214223 | MS.gene021114:intron |
| ATCTAAACTGATGGTTATCA+AGG | 0.465152 | 4.4:-42212412 | MS.gene021114:CDS |
| GTGTGCATTGTGCACACATC+TGG | 0.471356 | 4.4:+42212517 | None:intergenic |
| GATATGGCGCTTCGACAGAA+TGG | 0.471448 | 4.4:+42212432 | None:intergenic |
| GTTTCAAGCCAAGCAAATCA+AGG | 0.478084 | 4.4:-42212344 | MS.gene021114:CDS |
| GTGCTTCAACTAGCAGATAT+GGG | 0.478560 | 4.4:-42214334 | MS.gene021114:intron |
| CTTCATATTGCTGCTGCCAA+TGG | 0.485862 | 4.4:-42215329 | MS.gene021114:CDS |
| TATTGGACGCGAACAGGGAA+AGG | 0.487813 | 4.4:-42213396 | MS.gene021114:CDS |
| CAGCAGAAAGTATTGCCTTA+AGG | 0.490386 | 4.4:+42214616 | None:intergenic |
| TGCTGCCAATGGTCAGATCC+AGG | 0.493489 | 4.4:-42215318 | MS.gene021114:intron |
| TGCATTGCTGCCAACATAAG+TGG | 0.493653 | 4.4:+42214850 | None:intergenic |
| GGTAGCAGCAGCAGTTTCAA+GGG | 0.499150 | 4.4:-42212300 | MS.gene021114:CDS |
| GCTATATTTGCAGATGTCCT+GGG | 0.514636 | 4.4:-42214222 | MS.gene021114:intron |
| CATCCGCGAATTATTAGCAT+GGG | 0.514704 | 4.4:-42214155 | MS.gene021114:CDS |
| CTCTTTCGTGCTGTTCAACA+TGG | 0.515412 | 4.4:-42215434 | MS.gene021114:CDS |
| TGTGTTGAATCGACAAAAGC+AGG | 0.516759 | 4.4:-42215012 | MS.gene021114:intron |
| ATCTCCACACTCTGATCGAA+TGG | 0.518796 | 4.4:-42213335 | MS.gene021114:CDS |
| ATGCAGGCGGATACCATATG+TGG | 0.519878 | 4.4:-42213554 | MS.gene021114:intron |
| GTCTCCAACGTGATGCATCT+GGG | 0.525701 | 4.4:-42214123 | MS.gene021114:intron |
| AATGGACAGATGGGTGGGGT+GGG | 0.525799 | 4.4:+42212450 | None:intergenic |
| ATGCTGCATCTGCTTTGAGC+AGG | 0.528277 | 4.4:-42212571 | MS.gene021114:CDS |
| GACAGAATGGACAGATGGGT+GGG | 0.529180 | 4.4:+42212445 | None:intergenic |
| CACCCCATGCTAATAATTCG+CGG | 0.532650 | 4.4:+42214152 | None:intergenic |
| ATTCGATCAGAGTGTGGAGA+TGG | 0.534607 | 4.4:+42213337 | None:intergenic |
| GAATGGACAGATGGGTGGGG+TGG | 0.536558 | 4.4:+42212449 | None:intergenic |
| GTAGTACGATTGAGAAGAGA+AGG | 0.541763 | 4.4:+42215374 | None:intergenic |
| AATTCAGACCCCACTTATGT+TGG | 0.543384 | 4.4:-42214860 | MS.gene021114:intron |
| CTTATGTTGGCAGCAATGCA+TGG | 0.544992 | 4.4:-42214847 | MS.gene021114:CDS |
| CAAAGTGGTCTTAGTTGTAG+AGG | 0.545298 | 4.4:-42215473 | MS.gene021114:CDS |
| CCTTTAGCTGCTAAATGAAG+AGG | 0.547668 | 4.4:+42214193 | None:intergenic |
| GACTAACCAAGAAGCAGCCA+CGG | 0.550497 | 4.4:+42214581 | None:intergenic |
| GATTGCTTCCGAAAATGAAT+GGG | 0.551989 | 4.4:-42212226 | MS.gene021114:CDS |
| GCATTGCTGCCAACATAAGT+GGG | 0.556318 | 4.4:+42214851 | None:intergenic |
| AAGCAATCATCCCGGAACTA+CGG | 0.559960 | 4.4:+42212241 | None:intergenic |
| GGCCTTATTGGACGCGAACA+GGG | 0.567914 | 4.4:-42213401 | MS.gene021114:CDS |
| GTGAATATTAGAGACGGTAG+AGG | 0.570533 | 4.4:-42214437 | MS.gene021114:CDS |
| GTGGAAAAGTTGCTTGAAGC+TGG | 0.573507 | 4.4:-42214811 | MS.gene021114:CDS |
| ATTGGACGCGAACAGGGAAA+GGG | 0.577168 | 4.4:-42213395 | MS.gene021114:CDS |
| TTAATGTTTGATGTGTGTCA+TGG | 0.578777 | 4.4:-42214684 | MS.gene021114:CDS |
| GCTTCGACAGAATGGACAGA+TGG | 0.579479 | 4.4:+42212440 | None:intergenic |
| ACAGAATGGACAGATGGGTG+GGG | 0.584465 | 4.4:+42212446 | None:intergenic |
| TTGAACCTGGATCTGACCAT+TGG | 0.585236 | 4.4:+42215313 | None:intergenic |
| GGTAGAAACTCACGAAGACA+TGG | 0.587372 | 4.4:-42212391 | MS.gene021114:CDS |
| TGGCAGCAGCAATATGAAGA+GGG | 0.588977 | 4.4:+42215333 | None:intergenic |
| CGACAGAATGGACAGATGGG+TGG | 0.592181 | 4.4:+42212444 | None:intergenic |
| ATCTGGCAGCTCGTCAAAGA+CGG | 0.594811 | 4.4:-42214400 | MS.gene021114:CDS |
| AAGCGCCATATCTAAACTGA+TGG | 0.601000 | 4.4:-42212421 | MS.gene021114:CDS |
| TGACGAGCTGCCAGATGCAA+TGG | 0.602034 | 4.4:+42214407 | None:intergenic |
| GTGCACATTCTGTTGTGTAG+TGG | 0.607255 | 4.4:-42214368 | MS.gene021114:CDS |
| AATGATGATGGCCATACAAG+AGG | 0.608678 | 4.4:+42213472 | None:intergenic |
| GCATGGAAAGATTGAATGTG+TGG | 0.610223 | 4.4:-42214830 | MS.gene021114:CDS |
| GCATCCGCGAATTATTAGCA+TGG | 0.610332 | 4.4:-42214156 | MS.gene021114:CDS |
| CGAATTATTAGCATGGGGTG+CGG | 0.613204 | 4.4:-42214149 | MS.gene021114:CDS |
| GGGATGCGAAGTTGAAGTGT+TGG | 0.613230 | 4.4:+42212470 | None:intergenic |
| CTTCATTTAGCAGCTAAAGG+AGG | 0.613756 | 4.4:-42214190 | MS.gene021114:CDS |
| AAATGAAGAGGAGTACTCCC+AGG | 0.616255 | 4.4:+42214205 | None:intergenic |
| CTTCGACAGAATGGACAGAT+GGG | 0.616676 | 4.4:+42212441 | None:intergenic |
| TTGGCAGCAGCAATATGAAG+AGG | 0.619663 | 4.4:+42215332 | None:intergenic |
| TGCTGCGCAATCTAGTCCCG+TGG | 0.624672 | 4.4:-42214598 | MS.gene021114:CDS |
| ACTAACCAAGAAGCAGCCAC+GGG | 0.627620 | 4.4:+42214582 | None:intergenic |
| AACACTCTGCTGTCACAACA+AGG | 0.631175 | 4.4:-42212493 | MS.gene021114:CDS |
| TGTAGAGGTAGTCATGAACA+TGG | 0.643863 | 4.4:-42215458 | MS.gene021114:CDS |
| CGGTTTGTGAATATTAGAGA+CGG | 0.645981 | 4.4:-42214443 | MS.gene021114:CDS |
| TCATCCATTCGATCAGAGTG+TGG | 0.646169 | 4.4:+42213331 | None:intergenic |
| TGCATTGTGCACACATCTGG+TGG | 0.649232 | 4.4:+42212520 | None:intergenic |
| TAGTACGATTGAGAAGAGAA+GGG | 0.656985 | 4.4:+42215375 | None:intergenic |
| TGGAGAAGGATGGGTCAAAG+TGG | 0.658025 | 4.4:-42215488 | None:intergenic |
| AATCAGTGAACTTAATCCAG+AGG | 0.659408 | 4.4:-42213443 | MS.gene021114:CDS |
| GGCAGCAGCAATATGAAGAG+GGG | 0.664522 | 4.4:+42215334 | None:intergenic |
| CACGAAGACATGGATCTAGA+CGG | 0.665249 | 4.4:-42212381 | MS.gene021114:CDS |
| TTTGCTTGGCTTGAAACAAG+TGG | 0.668168 | 4.4:+42212350 | None:intergenic |
| AACAGGTGTCAACATCATTG+TGG | 0.669290 | 4.4:+42212192 | None:intergenic |
| TGTACCCAGATGCATCACGT+TGG | 0.686205 | 4.4:+42214119 | None:intergenic |
| ATCCGCGAATTATTAGCATG+GGG | 0.692205 | 4.4:-42214154 | MS.gene021114:CDS |
| GTTGCTTTGAAGTACAAACA+TGG | 0.699828 | 4.4:-42213532 | MS.gene021114:CDS |
| AAATTTCGTAACATGAACGA+GGG | 0.699839 | 4.4:-42212321 | MS.gene021114:CDS |
| GAAATTTCGTAACATGAACG+AGG | 0.700659 | 4.4:-42212322 | MS.gene021114:CDS |
| CATTGCTGCCAACATAAGTG+GGG | 0.709787 | 4.4:+42214852 | None:intergenic |
| AATGGATGACAATATCTCTG+AGG | 0.711499 | 4.4:-42213317 | MS.gene021114:intron |
| ACAATTGAAGTCCAAGACTG+TGG | 0.711764 | 4.4:-42212543 | MS.gene021114:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTATGAAAAATTATC+AGG | - | chr4.4:42212976-42212995 | MS.gene021114:intron | 10.0% |
| !! | TATAAATTTAATAAGTTTGT+AGG | + | chr4.4:42214483-42214502 | None:intergenic | 10.0% |
| !!! | AATTTGATTTTTTTTTCTTT+CGG | - | chr4.4:42212602-42212621 | MS.gene021114:intron | 10.0% |
| !!! | GATTATATTTTTCAAATTAT+AGG | + | chr4.4:42213927-42213946 | None:intergenic | 10.0% |
| !!! | TATCTTTAATTGTATTTTTT+TGG | - | chr4.4:42212799-42212818 | MS.gene021114:intron | 10.0% |
| !! | AAACTTATTAAATTTATAGC+AGG | - | chr4.4:42214485-42214504 | MS.gene021114:intron | 15.0% |
| !! | AAATATGTAAACCTATTATT+TGG | - | chr4.4:42213858-42213877 | MS.gene021114:intron | 15.0% |
| !! | TCATAAAATTGAAATAAACA+TGG | + | chr4.4:42212924-42212943 | None:intergenic | 15.0% |
| !!! | AAAAATATAATCACTTGTTT+TGG | - | chr4.4:42213935-42213954 | MS.gene021114:intron | 15.0% |
| !!! | ATTTGATTTTTTTTTCTTTC+GGG | - | chr4.4:42212603-42212622 | MS.gene021114:intron | 15.0% |
| !!! | CTAATTATTTGGATATTTTT+CGG | - | chr4.4:42214512-42214531 | MS.gene021114:intron | 15.0% |
| !!! | GATTTTAAAACATTTAACAA+TGG | - | chr4.4:42213187-42213206 | MS.gene021114:intron | 15.0% |
| !!! | TTTGAATTTTGATTTGAATT+TGG | - | chr4.4:42212712-42212731 | MS.gene021114:intron | 15.0% |
| !! | AAAATTGAAATAAACATGGA+GGG | + | chr4.4:42212920-42212939 | None:intergenic | 20.0% |
| !! | ATTAAAATGAAAAACCCAAT+TGG | + | chr4.4:42212541-42212560 | None:intergenic | 20.0% |
| !! | TAAAATTGAAATAAACATGG+AGG | + | chr4.4:42212921-42212940 | None:intergenic | 20.0% |
| !! | TCATTAATTTCTTTCCTAAT+TGG | - | chr4.4:42213140-42213159 | MS.gene021114:intron | 20.0% |
| !! | TTAAAATGAAAAACCCAATT+GGG | + | chr4.4:42212540-42212559 | None:intergenic | 20.0% |
| !! | TTTAACTGATCAAAATTAGA+AGG | + | chr4.4:42214579-42214598 | None:intergenic | 20.0% |
| !!! | ATTTAAGAAATTTTCAGACT+TGG | + | chr4.4:42214090-42214109 | None:intergenic | 20.0% |
| !!! | GATTTGAATTTGGATTTTAA+TGG | - | chr4.4:42212722-42212741 | MS.gene021114:intron | 20.0% |
| !!! | GGTTTTTCATTTTAATTTCT+GGG | - | chr4.4:42212545-42212564 | MS.gene021114:CDS | 20.0% |
| !!! | TGTTTGCTATTTTTCAATTT+AGG | - | chr4.4:42213980-42213999 | MS.gene021114:intron | 20.0% |
| ! | AACACGAAAAAAGAATGTAA+AGG | + | chr4.4:42212405-42212424 | None:intergenic | 25.0% |
| ! | AAGGATACAATTATATTGCA+GGG | - | chr4.4:42213211-42213230 | MS.gene021114:intron | 25.0% |
| ! | AAGTAGTAAATTCAAATGGT+TGG | + | chr4.4:42214419-42214438 | None:intergenic | 25.0% |
| ! | AATTAATGACAAAACCGAAA+AGG | + | chr4.4:42213129-42213148 | None:intergenic | 25.0% |
| ! | ACACGAAAAAAGAATGTAAA+GGG | + | chr4.4:42212404-42212423 | None:intergenic | 25.0% |
| ! | AGCAAAGTAGTAAATTCAAA+TGG | + | chr4.4:42214423-42214442 | None:intergenic | 25.0% |
| ! | AGTTGTAGTAGTAAAATGTA+AGG | - | chr4.4:42213885-42213904 | MS.gene021114:intron | 25.0% |
| ! | GAATCATAACAATGTTTCTT+GGG | + | chr4.4:42214017-42214036 | None:intergenic | 25.0% |
| ! | GAATTTACTACTTTGCTTAT+AGG | - | chr4.4:42214426-42214445 | MS.gene021114:CDS | 25.0% |
| ! | TAAAACATTTAACAATGGCA+AGG | - | chr4.4:42213192-42213211 | MS.gene021114:intron | 25.0% |
| ! | TAAAATGAAAAACCCAATTG+GGG | + | chr4.4:42212539-42212558 | None:intergenic | 25.0% |
| ! | TACAACTAATGCCAAATAAT+AGG | + | chr4.4:42213872-42213891 | None:intergenic | 25.0% |
| ! | TGAATCATAACAATGTTTCT+TGG | + | chr4.4:42214018-42214037 | None:intergenic | 25.0% |
| ! | TTATTATGAAACGTCTTAGA+TGG | - | chr4.4:42212487-42212506 | MS.gene021114:CDS | 25.0% |
| ! | TTGTATGATCTATCAATTGT+GGG | + | chr4.4:42213840-42213859 | None:intergenic | 25.0% |
| ! | TTGTCCAATGTAAATTCATT+CGG | - | chr4.4:42215409-42215428 | MS.gene021114:CDS | 25.0% |
| ! | TTTGTATGATCTATCAATTG+TGG | + | chr4.4:42213841-42213860 | None:intergenic | 25.0% |
| !! | AAAGAGATGATAGTTTTCTA+AGG | + | chr4.4:42214732-42214751 | None:intergenic | 25.0% |
| !! | GTTTTATCTAAGCTTTTAGA+TGG | - | chr4.4:42212635-42212654 | MS.gene021114:intron | 25.0% |
| !! | TTTTCCGAATGAATTTACAT+TGG | + | chr4.4:42215416-42215435 | None:intergenic | 25.0% |
| !!! | ATATAATCACTTGTTTTGGT+TGG | - | chr4.4:42213939-42213958 | MS.gene021114:intron | 25.0% |
| !!! | GGGTTTTTCATTTTAATTTC+TGG | - | chr4.4:42212544-42212563 | MS.gene021114:CDS | 25.0% |
| !!! | TCCATTATACATTCACTTTT+GGG | - | chr4.4:42214925-42214944 | MS.gene021114:intron | 25.0% |
| !!! | TGTTGAATCATTTTGTTTTG+TGG | - | chr4.4:42213429-42213448 | MS.gene021114:CDS | 25.0% |
| !!! | TTTCATTTTAATTTCTGGGT+CGG | - | chr4.4:42212549-42212568 | MS.gene021114:CDS | 25.0% |
| AAATTTCGTAACATGAACGA+GGG | - | chr4.4:42215364-42215383 | MS.gene021114:CDS | 30.0% | |
| AATTCATTCGGAAAAATGAG+CGG | - | chr4.4:42215421-42215440 | MS.gene021114:CDS | 30.0% | |
| ACTGTATCATCTCAAGTTAA+CGG | + | chr4.4:42213709-42213728 | None:intergenic | 30.0% | |
| ACTTGGAAGTTGAATAAAAC+AGG | + | chr4.4:42214073-42214092 | None:intergenic | 30.0% | |
| AGGATACAATTATATTGCAG+GGG | - | chr4.4:42213212-42213231 | MS.gene021114:intron | 30.0% | |
| AGGGAGAAAAACATATTGAA+AGG | - | chr4.4:42214309-42214328 | MS.gene021114:intron | 30.0% | |
| ATCTAAACTGATGGTTATCA+AGG | - | chr4.4:42215273-42215292 | MS.gene021114:intron | 30.0% | |
| CAAGGATACAATTATATTGC+AGG | - | chr4.4:42213210-42213229 | MS.gene021114:intron | 30.0% | |
| CTGATTATCTTCAATGATGA+TGG | + | chr4.4:42214228-42214247 | None:intergenic | 30.0% | |
| GATAACCATCAGTTTAGATA+TGG | + | chr4.4:42215272-42215291 | None:intergenic | 30.0% | |
| TAAGTATATAGTGTGGTTCA+AGG | + | chr4.4:42215052-42215071 | None:intergenic | 30.0% | |
| TACAGCAATGCAAATGTAAA+GGG | + | chr4.4:42214993-42215012 | None:intergenic | 30.0% | |
| TAGCAGGAAGTCTAATTATT+TGG | - | chr4.4:42214501-42214520 | MS.gene021114:intron | 30.0% | |
| TCTAATAAAACTTTAGCCTC+TGG | + | chr4.4:42214261-42214280 | None:intergenic | 30.0% | |
| TTAATGTTTGATGTGTGTCA+TGG | - | chr4.4:42213001-42213020 | MS.gene021114:intron | 30.0% | |
| TTACAGCAATGCAAATGTAA+AGG | + | chr4.4:42214994-42215013 | None:intergenic | 30.0% | |
| ! | AAAGAGTAGAAACAGTTTTC+AGG | + | chr4.4:42212280-42212299 | None:intergenic | 30.0% |
| ! | ATCATCAACCCATTCATTTT+CGG | + | chr4.4:42215470-42215489 | None:intergenic | 30.0% |
| ! | CGAGATCTAATGTAATTTTC+AGG | - | chr4.4:42215075-42215094 | MS.gene021114:intron | 30.0% |
| ! | CTTTCCTAATTGGTTCATAT+CGG | - | chr4.4:42213150-42213169 | MS.gene021114:intron | 30.0% |
| ! | GTCCATTATACATTCACTTT+TGG | - | chr4.4:42214924-42214943 | MS.gene021114:intron | 30.0% |
| !! | AATGGTTGGTAAGAAATCAA+AGG | + | chr4.4:42214405-42214424 | None:intergenic | 30.0% |
| !! | ATGGTTGGTAAGAAATCAAA+GGG | + | chr4.4:42214404-42214423 | None:intergenic | 30.0% |
| !! | CCATTATACATTCACTTTTG+GGG | - | chr4.4:42214926-42214945 | MS.gene021114:intron | 30.0% |
| !! | TGAAGATTTTTATTTCTCGC+TGG | + | chr4.4:42215021-42215040 | None:intergenic | 30.0% |
| AAAATGTAAGGCAGTCTCTA+AGG | - | chr4.4:42213897-42213916 | MS.gene021114:intron | 35.0% | |
| AACTCTGAGCTATTTGTCTT+TGG | - | chr4.4:42214617-42214636 | MS.gene021114:CDS | 35.0% | |
| AACTTGAGATTGAACTGTTG+AGG | - | chr4.4:42213775-42213794 | MS.gene021114:intron | 35.0% | |
| AATCAGTGAACTTAATCCAG+AGG | - | chr4.4:42214242-42214261 | MS.gene021114:intron | 35.0% | |
| AATGGATGACAATATCTCTG+AGG | - | chr4.4:42214368-42214387 | MS.gene021114:CDS | 35.0% | |
| ACATAGATTACAAGTCAGAG+AGG | + | chr4.4:42214967-42214986 | None:intergenic | 35.0% | |
| ACTCCGAATTATCAGATGAA+CGG | + | chr4.4:42212434-42212453 | None:intergenic | 35.0% | |
| ATCACCGATATGAACCAATT+AGG | + | chr4.4:42213157-42213176 | None:intergenic | 35.0% | |
| ATCATCTCTTTACCATCTGT+AGG | - | chr4.4:42214741-42214760 | MS.gene021114:intron | 35.0% | |
| ATCTCACCAATGATGATCAA+TGG | - | chr4.4:42213627-42213646 | MS.gene021114:intron | 35.0% | |
| ATTGGTGAGATCTTATCAAG+TGG | + | chr4.4:42213618-42213637 | None:intergenic | 35.0% | |
| CCAAATCCATTGATCATCAT+TGG | + | chr4.4:42213636-42213655 | None:intergenic | 35.0% | |
| CCCCAAAAGTGAATGTATAA+TGG | + | chr4.4:42214929-42214948 | None:intergenic | 35.0% | |
| CGGTTTGTGAATATTAGAGA+CGG | - | chr4.4:42213242-42213261 | MS.gene021114:intron | 35.0% | |
| CTCGCAATAAGTATATAGTG+TGG | + | chr4.4:42215059-42215078 | None:intergenic | 35.0% | |
| GAAATTTCGTAACATGAACG+AGG | - | chr4.4:42215363-42215382 | MS.gene021114:CDS | 35.0% | |
| GAGTTTATGCATAATTCGAC+AGG | + | chr4.4:42214602-42214621 | None:intergenic | 35.0% | |
| GATCTATCAATTGTGGGATT+TGG | + | chr4.4:42213834-42213853 | None:intergenic | 35.0% | |
| GATTGCTTCCGAAAATGAAT+GGG | - | chr4.4:42215459-42215478 | MS.gene021114:CDS | 35.0% | |
| GCATAAAACACACAGTTTGA+AGG | + | chr4.4:42214115-42214134 | None:intergenic | 35.0% | |
| GGATACAATTATATTGCAGG+GGG | - | chr4.4:42213213-42213232 | MS.gene021114:intron | 35.0% | |
| GGTGCAGTTGAATTGAATTA+TGG | - | chr4.4:42214447-42214466 | MS.gene021114:CDS | 35.0% | |
| TAAAGGGAAAAGATTGAACC+TGG | + | chr4.4:42212388-42212407 | None:intergenic | 35.0% | |
| TAACAATGTTTCTTGGGACA+AGG | + | chr4.4:42214011-42214030 | None:intergenic | 35.0% | |
| TACTTCAAAGCAACCACATA+TGG | + | chr4.4:42214147-42214166 | None:intergenic | 35.0% | |
| TAGTACGATTGAGAAGAGAA+GGG | + | chr4.4:42212313-42212332 | None:intergenic | 35.0% | |
| TCTAAGCCTAAAAGGTAAGT+GGG | + | chr4.4:42214678-42214697 | None:intergenic | 35.0% | |
| TCTCCGTTCATCTGATAATT+CGG | - | chr4.4:42212428-42212447 | MS.gene021114:CDS | 35.0% | |
| TGATTGCTTCCGAAAATGAA+TGG | - | chr4.4:42215458-42215477 | MS.gene021114:CDS | 35.0% | |
| TGGAAAGAATTGAATGTGTG+TGG | - | chr4.4:42212742-42212761 | MS.gene021114:intron | 35.0% | |
| ! | AAACAAGAGCACAATAGGAA+AGG | + | chr4.4:42213965-42213984 | None:intergenic | 35.0% |
| ! | ATAGCAAACAAGAGCACAAT+AGG | + | chr4.4:42213970-42213989 | None:intergenic | 35.0% |
| ! | CAATGGATTTGGATTTCCTA+TGG | - | chr4.4:42213644-42213663 | MS.gene021114:intron | 35.0% |
| ! | CCAATGATGATCAATGGATT+TGG | - | chr4.4:42213633-42213652 | MS.gene021114:intron | 35.0% |
| ! | TCAAACTGTGTGTTTTATGC+AGG | - | chr4.4:42214115-42214134 | MS.gene021114:intron | 35.0% |
| ! | TTGCATTATGCTGCTTACTA+TGG | - | chr4.4:42213034-42213053 | MS.gene021114:intron | 35.0% |
| ! | TTTATTAGAGCAGGCCTTAT+TGG | - | chr4.4:42214272-42214291 | MS.gene021114:intron | 35.0% |
| ! | TTTTTCTTTCGGGAATTTGC+AGG | - | chr4.4:42212613-42212632 | MS.gene021114:intron | 35.0% |
| !! | CGAAATTTCCTTGATTTGCT+TGG | + | chr4.4:42215352-42215371 | None:intergenic | 35.0% |
| !! | GACAATATCTCTGAGGTAAT+TGG | - | chr4.4:42214375-42214394 | MS.gene021114:CDS | 35.0% |
| !! | GTTGCTTTGAAGTACAAACA+TGG | - | chr4.4:42214153-42214172 | MS.gene021114:CDS | 35.0% |
| !!! | GGCTAAAGTTTTATTAGAGC+AGG | - | chr4.4:42214263-42214282 | MS.gene021114:intron | 35.0% |
| !!! | TAATTTTCAGGTTAGCGAGA+CGG | - | chr4.4:42215087-42215106 | MS.gene021114:intron | 35.0% |
| !!! | TTTTGTCGATTCAACACATC+TGG | + | chr4.4:42212671-42212690 | None:intergenic | 35.0% |
| AAAAACCCAATTGGGGAACT+TGG | + | chr4.4:42212532-42212551 | None:intergenic | 40.0% | |
| AAAACCCAATTGGGGAACTT+GGG | + | chr4.4:42212531-42212550 | None:intergenic | 40.0% | |
| AACAGAATGTGCACACATTC+AGG | + | chr4.4:42213311-42213330 | None:intergenic | 40.0% | |
| AACGATGAGTCTGATAAGCT+TGG | - | chr4.4:42213394-42213413 | MS.gene021114:CDS | 40.0% | |
| AAGCGCCATATCTAAACTGA+TGG | - | chr4.4:42215264-42215283 | MS.gene021114:intron | 40.0% | |
| AATTCAGACCCCACTTATGT+TGG | - | chr4.4:42212825-42212844 | MS.gene021114:intron | 40.0% | |
| ACAATTGAAGTCCAAGACTG+TGG | - | chr4.4:42215142-42215161 | MS.gene021114:intron | 40.0% | |
| ATCCGCGAATTATTAGCATG+GGG | - | chr4.4:42213531-42213550 | MS.gene021114:CDS | 40.0% | |
| CATCCGCGAATTATTAGCAT+GGG | - | chr4.4:42213530-42213549 | MS.gene021114:CDS | 40.0% | |
| CCTCTTCATTTAGCAGCTAA+AGG | - | chr4.4:42213492-42213511 | MS.gene021114:CDS | 40.0% | |
| CCTTTAGCTGCTAAATGAAG+AGG | + | chr4.4:42213495-42213514 | None:intergenic | 40.0% | |
| CGATCATCATCATGTCAAAC+AGG | - | chr4.4:42214799-42214818 | MS.gene021114:intron | 40.0% | |
| CTCTAAGCCTAAAAGGTAAG+TGG | + | chr4.4:42214679-42214698 | None:intergenic | 40.0% | |
| CTTCATTTAGCAGCTAAAGG+AGG | - | chr4.4:42213495-42213514 | MS.gene021114:CDS | 40.0% | |
| GCATGGAAAGATTGAATGTG+TGG | - | chr4.4:42212855-42212874 | MS.gene021114:intron | 40.0% | |
| GCTATATTTGCAGATGTCCT+GGG | - | chr4.4:42213463-42213482 | MS.gene021114:CDS | 40.0% | |
| GGTAACTTCTAACCTACAGA+TGG | + | chr4.4:42214756-42214775 | None:intergenic | 40.0% | |
| GTAGTACGATTGAGAAGAGA+AGG | + | chr4.4:42212314-42212333 | None:intergenic | 40.0% | |
| GTGAATATTAGAGACGGTAG+AGG | - | chr4.4:42213248-42213267 | MS.gene021114:intron | 40.0% | |
| GTGCTTCAACTAGCAGATAT+GGG | - | chr4.4:42213351-42213370 | MS.gene021114:CDS | 40.0% | |
| GTTTCAAGCCAAGCAAATCA+AGG | - | chr4.4:42215341-42215360 | MS.gene021114:CDS | 40.0% | |
| TAGATTACAAGTCAGAGAGG+CGG | + | chr4.4:42214964-42214983 | None:intergenic | 40.0% | |
| TGCTATATTTGCAGATGTCC+TGG | - | chr4.4:42213462-42213481 | MS.gene021114:CDS | 40.0% | |
| TGGATTTGGATTTCCTATGG+AGG | - | chr4.4:42213647-42213666 | MS.gene021114:intron | 40.0% | |
| TGGTCATTCTTCTTGCCTTA+AGG | - | chr4.4:42213054-42213073 | MS.gene021114:intron | 40.0% | |
| TGTAGAGGTAGTCATGAACA+TGG | - | chr4.4:42212227-42212246 | MS.gene021114:CDS | 40.0% | |
| TGTGCTTCAACTAGCAGATA+TGG | - | chr4.4:42213350-42213369 | MS.gene021114:CDS | 40.0% | |
| TGTGTTGAATCGACAAAAGC+AGG | - | chr4.4:42212673-42212692 | MS.gene021114:intron | 40.0% | |
| ! | AACTGTGTGTTTTATGCAGG+CGG | - | chr4.4:42214118-42214137 | MS.gene021114:intron | 40.0% |
| ! | ACATGATGATGATCGCTTGA+TGG | + | chr4.4:42214794-42214813 | None:intergenic | 40.0% |
| ! | ATTTTCGGAAGCAATCATCC+CGG | + | chr4.4:42215455-42215474 | None:intergenic | 40.0% |
| ! | CAAAGTGGTCTTAGTTGTAG+AGG | - | chr4.4:42212212-42212231 | MS.gene021114:CDS | 40.0% |
| ! | CATGATGATGATCGCTTGAT+GGG | + | chr4.4:42214793-42214812 | None:intergenic | 40.0% |
| ! | TACCTTTTAGGCTTAGAGCT+CGG | - | chr4.4:42214681-42214700 | MS.gene021114:CDS | 40.0% |
| ! | TTTGCTTGGCTTGAAACAAG+TGG | + | chr4.4:42215338-42215357 | None:intergenic | 40.0% |
| !! | AATGATGATGGCCATACAAG+AGG | + | chr4.4:42214216-42214235 | None:intergenic | 40.0% |
| !! | CAGCAGAAAGTATTGCCTTA+AGG | + | chr4.4:42213072-42213091 | None:intergenic | 40.0% |
| !! | GCTTCTTGGTTAGTCCTTTT+CGG | - | chr4.4:42213112-42213131 | MS.gene021114:intron | 40.0% |
| !!! | AGTTTTCTAAGGTAGCTCGT+TGG | + | chr4.4:42214721-42214740 | None:intergenic | 40.0% |
| !!! | GTTTTCTAAGGTAGCTCGTT+GGG | + | chr4.4:42214720-42214739 | None:intergenic | 40.0% |
| AACACTCTGCTGTCACAACA+AGG | - | chr4.4:42215192-42215211 | MS.gene021114:intron | 45.0% | |
| AAGCAATCATCCCGGAACTA+CGG | + | chr4.4:42215447-42215466 | None:intergenic | 45.0% | |
| ATCTCCACACTCTGATCGAA+TGG | - | chr4.4:42214350-42214369 | MS.gene021114:CDS | 45.0% | |
| ATTCGATCAGAGTGTGGAGA+TGG | + | chr4.4:42214351-42214370 | None:intergenic | 45.0% | |
| CACCCCATGCTAATAATTCG+CGG | + | chr4.4:42213536-42213555 | None:intergenic | 45.0% | |
| CACGAAGACATGGATCTAGA+CGG | - | chr4.4:42215304-42215323 | MS.gene021114:intron | 45.0% | |
| CATTGCTGCCAACATAAGTG+GGG | + | chr4.4:42212836-42212855 | None:intergenic | 45.0% | |
| CGAATTATTAGCATGGGGTG+CGG | - | chr4.4:42213536-42213555 | MS.gene021114:CDS | 45.0% | |
| CTTATGTTGGCAGCAATGCA+TGG | - | chr4.4:42212838-42212857 | MS.gene021114:intron | 45.0% | |
| CTTCATATTGCTGCTGCCAA+TGG | - | chr4.4:42212356-42212375 | MS.gene021114:CDS | 45.0% | |
| CTTCGACAGAATGGACAGAT+GGG | + | chr4.4:42215247-42215266 | None:intergenic | 45.0% | |
| GAAGTTACCAATGCGTGTAG+CGG | - | chr4.4:42214767-42214786 | MS.gene021114:intron | 45.0% | |
| GCATCCGCGAATTATTAGCA+TGG | - | chr4.4:42213529-42213548 | MS.gene021114:CDS | 45.0% | |
| GCATTGCTGCCAACATAAGT+GGG | + | chr4.4:42212837-42212856 | None:intergenic | 45.0% | |
| GGTAGAAACTCACGAAGACA+TGG | - | chr4.4:42215294-42215313 | MS.gene021114:intron | 45.0% | |
| GTGCACATTCTGTTGTGTAG+TGG | - | chr4.4:42213317-42213336 | MS.gene021114:intron | 45.0% | |
| GTGGAAAAGTTGCTTGAAGC+TGG | - | chr4.4:42212874-42212893 | MS.gene021114:intron | 45.0% | |
| TATATTGCAGGGGGTTTGCA+CGG | - | chr4.4:42213222-42213241 | MS.gene021114:intron | 45.0% | |
| TCATCCATTCGATCAGAGTG+TGG | + | chr4.4:42214357-42214376 | None:intergenic | 45.0% | |
| TGCATTGCTGCCAACATAAG+TGG | + | chr4.4:42212838-42212857 | None:intergenic | 45.0% | |
| TGGCAGCAGCAATATGAAGA+GGG | + | chr4.4:42212355-42212374 | None:intergenic | 45.0% | |
| TGTGGAGATGGAAGAGAGTA+AGG | + | chr4.4:42214339-42214358 | None:intergenic | 45.0% | |
| TTGAACCTGGATCTGACCAT+TGG | + | chr4.4:42212375-42212394 | None:intergenic | 45.0% | |
| TTGGCAGCAGCAATATGAAG+AGG | + | chr4.4:42212356-42212375 | None:intergenic | 45.0% | |
| ! | ACCTTTTAGGCTTAGAGCTC+GGG | - | chr4.4:42214682-42214701 | MS.gene021114:CDS | 45.0% |
| ! | CTCTTTCGTGCTGTTCAACA+TGG | - | chr4.4:42212251-42212270 | MS.gene021114:CDS | 45.0% |
| ! | GTCAAGCCCACTTACCTTTT+AGG | - | chr4.4:42214669-42214688 | MS.gene021114:CDS | 45.0% |
| !! | AAATGAAGAGGAGTACTCCC+AGG | + | chr4.4:42213483-42213502 | None:intergenic | 45.0% |
| AAAATGAGCGGCCGTAGTTC+CGG | - | chr4.4:42215433-42215452 | MS.gene021114:CDS | 50.0% | |
| ACAGAATGGACAGATGGGTG+GGG | + | chr4.4:42215242-42215261 | None:intergenic | 50.0% | |
| ACTAACCAAGAAGCAGCCAC+GGG | + | chr4.4:42213106-42213125 | None:intergenic | 50.0% | |
| ATCTGGCAGCTCGTCAAAGA+CGG | - | chr4.4:42213285-42213304 | MS.gene021114:intron | 50.0% | |
| ATGCAGGCGGATACCATATG+TGG | - | chr4.4:42214131-42214150 | MS.gene021114:CDS | 50.0% | |
| ATTGGACGCGAACAGGGAAA+GGG | - | chr4.4:42214290-42214309 | MS.gene021114:intron | 50.0% | |
| CATCTGCACAGCCTCTTGTA+TGG | - | chr4.4:42214202-42214221 | MS.gene021114:CDS | 50.0% | |
| GACAGAATGGACAGATGGGT+GGG | + | chr4.4:42215243-42215262 | None:intergenic | 50.0% | |
| GACTAACCAAGAAGCAGCCA+CGG | + | chr4.4:42213107-42213126 | None:intergenic | 50.0% | |
| GATATGGCGCTTCGACAGAA+TGG | + | chr4.4:42215256-42215275 | None:intergenic | 50.0% | |
| GCTTCGACAGAATGGACAGA+TGG | + | chr4.4:42215248-42215267 | None:intergenic | 50.0% | |
| GGCAGCAGCAATATGAAGAG+GGG | + | chr4.4:42212354-42212373 | None:intergenic | 50.0% | |
| GGCTTGACTAAGTCGTTACC+CGG | + | chr4.4:42214657-42214676 | None:intergenic | 50.0% | |
| GGGATGCGAAGTTGAAGTGT+TGG | + | chr4.4:42215218-42215237 | None:intergenic | 50.0% | |
| GGTAGCAGCAGCAGTTTCAA+GGG | - | chr4.4:42215385-42215404 | MS.gene021114:CDS | 50.0% | |
| GTCTCCAACGTGATGCATCT+GGG | - | chr4.4:42213562-42213581 | MS.gene021114:intron | 50.0% | |
| GTGTGCATTGTGCACACATC+TGG | + | chr4.4:42215171-42215190 | None:intergenic | 50.0% | |
| TATTGGACGCGAACAGGGAA+AGG | - | chr4.4:42214289-42214308 | MS.gene021114:intron | 50.0% | |
| TGAGCCCAAGTTCCCCAATT+GGG | - | chr4.4:42212524-42212543 | MS.gene021114:CDS | 50.0% | |
| TGCATTGTGCACACATCTGG+TGG | + | chr4.4:42215168-42215187 | None:intergenic | 50.0% | |
| TGTACCCAGATGCATCACGT+TGG | + | chr4.4:42213569-42213588 | None:intergenic | 50.0% | |
| TTCCCTGTTCGCGTCCAATA+AGG | + | chr4.4:42214289-42214308 | None:intergenic | 50.0% | |
| TTGAGCCCAAGTTCCCCAAT+TGG | - | chr4.4:42212523-42212542 | MS.gene021114:CDS | 50.0% | |
| TTGGGGAACTTGGGCTCAAA+TGG | + | chr4.4:42212522-42212541 | None:intergenic | 50.0% | |
| ! | AGGTGCTACACCATTGCATC+TGG | - | chr4.4:42213268-42213287 | MS.gene021114:intron | 50.0% |
| ! | ATGCTGCATCTGCTTTGAGC+AGG | - | chr4.4:42215114-42215133 | MS.gene021114:intron | 50.0% |
| ! | CCTTTTAGGCTTAGAGCTCG+GGG | - | chr4.4:42214683-42214702 | MS.gene021114:CDS | 50.0% |
| ! | TCTAAGGTAGCTCGTTGGGA+TGG | + | chr4.4:42214716-42214735 | None:intergenic | 50.0% |
| !!! | CAGCGTGCTTTTTCCTCCAT+AGG | + | chr4.4:42213663-42213682 | None:intergenic | 50.0% |
| AAATGAGCGGCCGTAGTTCC+GGG | - | chr4.4:42215434-42215453 | MS.gene021114:CDS | 55.0% | |
| AATGGACAGATGGGTGGGGT+GGG | + | chr4.4:42215238-42215257 | None:intergenic | 55.0% | |
| ACATCTGGTGGCCACAGTCT+TGG | + | chr4.4:42215156-42215175 | None:intergenic | 55.0% | |
| CGACAGAATGGACAGATGGG+TGG | + | chr4.4:42215244-42215263 | None:intergenic | 55.0% | |
| CGTCTCCAACGTGATGCATC+TGG | - | chr4.4:42213561-42213580 | MS.gene021114:intron | 55.0% | |
| GACTAAGTCGTTACCCGGCT+GGG | + | chr4.4:42214652-42214671 | None:intergenic | 55.0% | |
| GGGTAGCAGCAGCAGTTTCA+AGG | - | chr4.4:42215384-42215403 | MS.gene021114:CDS | 55.0% | |
| TGACGAGCTGCCAGATGCAA+TGG | + | chr4.4:42213281-42213300 | None:intergenic | 55.0% | |
| TGACTAAGTCGTTACCCGGC+TGG | + | chr4.4:42214653-42214672 | None:intergenic | 55.0% | |
| TGCTGCCAATGGTCAGATCC+AGG | - | chr4.4:42212367-42212386 | MS.gene021114:CDS | 55.0% | |
| !! | AGGCCTTATTGGACGCGAAC+AGG | - | chr4.4:42214283-42214302 | MS.gene021114:intron | 55.0% |
| !! | CCCCGAGCTCTAAGCCTAAA+AGG | + | chr4.4:42214686-42214705 | None:intergenic | 55.0% |
| !! | GGCCTTATTGGACGCGAACA+GGG | - | chr4.4:42214284-42214303 | MS.gene021114:intron | 55.0% |
| CTAGTCCCGTGGCTGCTTCT+TGG | - | chr4.4:42213098-42213117 | MS.gene021114:intron | 60.0% | |
| GAATGGACAGATGGGTGGGG+TGG | + | chr4.4:42215239-42215258 | None:intergenic | 60.0% | |
| TGCTGCGCAATCTAGTCCCG+TGG | - | chr4.4:42213087-42213106 | MS.gene021114:intron | 60.0% | |
| ! | TGATGGGCCGCTACACGCAT+TGG | + | chr4.4:42214777-42214796 | None:intergenic | 60.0% |
| !! | TTTGGCTCTGCTGTCCCAGC+CGG | - | chr4.4:42214635-42214654 | MS.gene021114:CDS | 60.0% |
| !! | TTGGCTCTGCTGTCCCAGCC+GGG | - | chr4.4:42214636-42214655 | MS.gene021114:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 42212206 | 42215501 | 42212206 | ID=MS.gene021114 |
| chr4.4 | mRNA | 42212206 | 42215501 | 42212206 | ID=MS.gene021114.t1;Parent=MS.gene021114 |
| chr4.4 | exon | 42215319 | 42215501 | 42215319 | ID=MS.gene021114.t1.exon1;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42215319 | 42215501 | 42215319 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| chr4.4 | exon | 42215013 | 42215072 | 42215013 | ID=MS.gene021114.t1.exon2;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42215013 | 42215072 | 42215013 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| chr4.4 | exon | 42214804 | 42214875 | 42214804 | ID=MS.gene021114.t1.exon3;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42214804 | 42214875 | 42214804 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| chr4.4 | exon | 42214588 | 42214709 | 42214588 | ID=MS.gene021114.t1.exon4;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42214588 | 42214709 | 42214588 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| chr4.4 | exon | 42214335 | 42214475 | 42214335 | ID=MS.gene021114.t1.exon5;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42214335 | 42214475 | 42214335 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| chr4.4 | exon | 42214124 | 42214231 | 42214124 | ID=MS.gene021114.t1.exon6;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42214124 | 42214231 | 42214124 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| chr4.4 | exon | 42213318 | 42213570 | 42213318 | ID=MS.gene021114.t1.exon7;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42213318 | 42213570 | 42213318 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| chr4.4 | exon | 42212206 | 42212610 | 42212206 | ID=MS.gene021114.t1.exon8;Parent=MS.gene021114.t1 |
| chr4.4 | CDS | 42212206 | 42212610 | 42212206 | ID=cds.MS.gene021114.t1;Parent=MS.gene021114.t1 |
| Gene Sequence |
| Protein sequence |
