Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001874.t1 | XP_003622019.1 | 100 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 2.80E-217 | 764.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001874.t1 | P53496 | 97.6 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 2.6e-216 | 752.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001874.t1 | G7L017 | 100.0 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 2.0e-217 | 764.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001874.t1 | MTR_7g026230 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 784 |
MS.gene001874.t1 | MTR_6g004000 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
MS.gene001874.t1 | MTR_0015s0130 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
MS.gene001874.t1 | MTR_2g096840 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
MS.gene001874.t1 | MTR_3g095530 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene001874.t1 | MTR_7g093260 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
MS.gene001874.t1 | MTR_2g008050 | 93.899 | 377 | 23 | 0 | 1 | 377 | 1 | 377 | 0.0 | 751 |
MS.gene001874.t1 | MTR_7g027185 | 43.272 | 379 | 201 | 3 | 10 | 374 | 7 | 385 | 3.00e-120 | 353 |
MS.gene001874.t1 | MTR_7g027185 | 44.507 | 355 | 184 | 2 | 10 | 351 | 7 | 361 | 1.13e-117 | 346 |
MS.gene001874.t1 | MTR_7g027185 | 47.557 | 307 | 159 | 1 | 10 | 314 | 7 | 313 | 5.71e-110 | 324 |
MS.gene001874.t1 | MTR_5g066400 | 37.360 | 447 | 206 | 12 | 1 | 376 | 1 | 444 | 1.22e-90 | 280 |
MS.gene001874.t1 | MTR_8g464900 | 36.574 | 432 | 201 | 11 | 1 | 362 | 1 | 429 | 4.02e-84 | 262 |
MS.gene001874.t1 | MTR_5g066400 | 34.753 | 446 | 191 | 12 | 1 | 376 | 1 | 416 | 5.74e-78 | 246 |
MS.gene001874.t1 | MTR_8g089630 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.86e-72 | 232 |
MS.gene001874.t1 | MTR_3g030550 | 38.158 | 380 | 209 | 9 | 7 | 377 | 1 | 363 | 3.11e-70 | 224 |
MS.gene001874.t1 | MTR_5g066400 | 34.250 | 400 | 192 | 11 | 1 | 332 | 1 | 397 | 1.14e-66 | 217 |
MS.gene001874.t1 | MTR_2g445210 | 29.314 | 423 | 233 | 8 | 8 | 366 | 6 | 426 | 1.04e-57 | 194 |
MS.gene001874.t1 | MTR_8g007440 | 32.955 | 264 | 150 | 5 | 77 | 319 | 9 | 266 | 8.37e-44 | 153 |
MS.gene001874.t1 | MTR_2g445210 | 27.957 | 372 | 202 | 8 | 8 | 315 | 6 | 375 | 9.38e-44 | 155 |
MS.gene001874.t1 | MTR_3g010170 | 31.313 | 297 | 180 | 9 | 91 | 371 | 179 | 467 | 4.85e-42 | 153 |
MS.gene001874.t1 | MTR_8g070520 | 31.741 | 293 | 173 | 10 | 91 | 366 | 187 | 469 | 1.40e-37 | 141 |
MS.gene001874.t1 | MTR_8g070520 | 31.295 | 278 | 165 | 9 | 91 | 352 | 187 | 454 | 2.86e-34 | 132 |
MS.gene001874.t1 | MTR_3g067945 | 29.365 | 252 | 159 | 7 | 9 | 245 | 21 | 268 | 4.16e-23 | 101 |
MS.gene001874.t1 | MTR_3g067945 | 33.607 | 122 | 78 | 2 | 250 | 368 | 586 | 707 | 2.57e-15 | 77.8 |
MS.gene001874.t1 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 340 | 376 | 41 | 77 | 4.15e-13 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001874.t1 | AT3G12110 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 770 |
MS.gene001874.t1 | AT3G53750 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene001874.t1 | AT3G53750 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene001874.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene001874.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene001874.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene001874.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene001874.t1 | AT3G46520 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
MS.gene001874.t1 | AT3G46520 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
MS.gene001874.t1 | AT5G09810 | 95.225 | 377 | 18 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
MS.gene001874.t1 | AT5G59370 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
MS.gene001874.t1 | AT5G59370 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
MS.gene001874.t1 | AT1G49240 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
MS.gene001874.t1 | AT3G18780 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
MS.gene001874.t1 | AT3G18780 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
MS.gene001874.t1 | AT3G18780 | 91.643 | 359 | 30 | 0 | 1 | 359 | 1 | 359 | 0.0 | 702 |
MS.gene001874.t1 | AT2G42100 | 84.783 | 368 | 56 | 0 | 10 | 377 | 11 | 378 | 0.0 | 677 |
MS.gene001874.t1 | AT2G42090 | 70.541 | 370 | 104 | 1 | 7 | 376 | 1 | 365 | 0.0 | 568 |
MS.gene001874.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
MS.gene001874.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
MS.gene001874.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
MS.gene001874.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
MS.gene001874.t1 | AT2G42170 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 4.65e-132 | 377 |
MS.gene001874.t1 | AT3G27000 | 43.536 | 379 | 200 | 3 | 10 | 374 | 7 | 385 | 1.01e-121 | 357 |
MS.gene001874.t1 | AT1G18450 | 37.020 | 443 | 209 | 9 | 1 | 376 | 1 | 440 | 1.03e-93 | 287 |
MS.gene001874.t1 | AT1G13180 | 34.223 | 412 | 219 | 9 | 10 | 372 | 9 | 417 | 1.10e-72 | 233 |
MS.gene001874.t1 | AT3G60830 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.06e-67 | 218 |
MS.gene001874.t1 | AT3G33520 | 30.879 | 421 | 233 | 7 | 10 | 377 | 5 | 420 | 4.81e-61 | 202 |
MS.gene001874.t1 | AT5G56180 | 32.394 | 284 | 167 | 9 | 91 | 358 | 50 | 324 | 5.98e-37 | 137 |
MS.gene001874.t1 | AT5G56180 | 32.394 | 284 | 167 | 9 | 91 | 358 | 182 | 456 | 3.36e-36 | 137 |
MS.gene001874.t1 | AT3G12380 | 31.008 | 258 | 153 | 9 | 9 | 245 | 21 | 274 | 3.63e-26 | 110 |
MS.gene001874.t1 | AT3G12380 | 33.103 | 145 | 93 | 2 | 228 | 368 | 572 | 716 | 4.69e-16 | 80.5 |
MS.gene001874.t1 | AT3G12380 | 30.859 | 256 | 150 | 9 | 9 | 245 | 21 | 268 | 1.87e-25 | 108 |
MS.gene001874.t1 | AT3G12380 | 33.103 | 145 | 93 | 2 | 228 | 368 | 566 | 710 | 4.93e-16 | 80.1 |
MS.gene001874.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
MS.gene001874.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
MS.gene001874.t1 | AT5G56180 | 33.663 | 202 | 111 | 8 | 91 | 281 | 182 | 371 | 6.16e-21 | 93.6 |
MS.gene001874.t1 | AT1G73910 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.54e-12 | 65.1 |
Find 118 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACGGTAACATTGTGCTTTC+AGG | 0.144297 | 7.3:-73559262 | MS.gene001874:CDS |
AAAAGCACTGGGTGTTCTTC+TGG | 0.181767 | 7.3:+73560298 | None:intergenic |
TGCTATGTATGTTGCTATTC+AGG | 0.269599 | 7.3:-73560200 | MS.gene001874:CDS |
GCAGGTATTGTGTTGGATTC+TGG | 0.277388 | 7.3:-73559697 | MS.gene001874:intron |
CACTTTCTGTGGACAATTGA+TGG | 0.320963 | 7.3:+73558538 | None:intergenic |
ACCTTGATCTTCATGCTACT+TGG | 0.331858 | 7.3:+73559178 | None:intergenic |
CTCATTCTGTCAGCAATGCC+TGG | 0.344924 | 7.3:+73559223 | None:intergenic |
ATCTTCTCACGATTGGCCTT+AGG | 0.347633 | 7.3:+73560256 | None:intergenic |
GCTGTGTTTCCCAGCATTGT+AGG | 0.369101 | 7.3:-73560505 | MS.gene001874:CDS |
GAGCAAGGAAATTTCTGCTT+TGG | 0.374975 | 7.3:-73559203 | MS.gene001874:CDS |
AACATGGAATCGTTAGCAAC+TGG | 0.386131 | 7.3:-73560375 | MS.gene001874:CDS |
GCTTCCATTCCTATCATAGA+TGG | 0.387544 | 7.3:+73559352 | None:intergenic |
AGGGCATAACCCTCGTAGAT+AGG | 0.389103 | 7.3:+73559652 | None:intergenic |
CCTTGATCTTCATGCTACTT+GGG | 0.389144 | 7.3:+73559179 | None:intergenic |
AAAGCACTGGGTGTTCTTCT+GGG | 0.391378 | 7.3:+73560299 | None:intergenic |
CTTGTTTGTGACAATGGAAC+TGG | 0.397675 | 7.3:-73561101 | MS.gene001874:CDS |
CTGAGAGAAAATACAGTGTC+TGG | 0.408420 | 7.3:-73559144 | MS.gene001874:CDS |
TCTTCTCACGATTGGCCTTA+GGG | 0.411910 | 7.3:+73560257 | None:intergenic |
CAAAATCTTCATCAAGAAAT+CGG | 0.413590 | 7.3:+73559585 | None:intergenic |
TGCCATCCTTCGTCTTGATC+TGG | 0.418422 | 7.3:-73559623 | MS.gene001874:CDS |
CTGGATTGGAGGTTCCATCT+TGG | 0.418962 | 7.3:-73559125 | MS.gene001874:CDS |
CTGTTCCAACCATCTATGAT+AGG | 0.420168 | 7.3:-73559361 | MS.gene001874:CDS |
TGAAGTGCGATGTTGATATC+AGG | 0.420318 | 7.3:-73559294 | MS.gene001874:CDS |
GGGACGACATGGAAAAGATT+TGG | 0.423131 | 7.3:-73560354 | MS.gene001874:CDS |
CTAACGATTCCATGTTCAAT+GGG | 0.426897 | 7.3:+73560382 | None:intergenic |
TTGAGTCATCTTCTCACGAT+TGG | 0.438247 | 7.3:+73560249 | None:intergenic |
ATCTCTTAGCACCTTCCAGC+AGG | 0.441982 | 7.3:-73559101 | MS.gene001874:intron |
CACTGGTGTGATGGTTGGCA+TGG | 0.445024 | 7.3:-73560470 | MS.gene001874:CDS |
CAACCTCTTGTTTGTGACAA+TGG | 0.449997 | 7.3:-73561107 | MS.gene001874:CDS |
CAATGGAACTGGAATGGTTA+AGG | 0.450612 | 7.3:-73561090 | MS.gene001874:intron |
CCTCGTAGATAGGGACAGTA+TGG | 0.450826 | 7.3:+73559662 | None:intergenic |
CTCGACGGATGAGCTGGTCC+TGG | 0.454464 | 7.3:+73559453 | None:intergenic |
GAGAGTCAAAATACCCCTCT+TGG | 0.454876 | 7.3:+73560411 | None:intergenic |
TCTCTATGCAGGTATTGTGT+TGG | 0.455001 | 7.3:-73559704 | MS.gene001874:intron |
CTACGAATTGCCTGATGGAC+AGG | 0.461381 | 7.3:-73559425 | MS.gene001874:CDS |
AGCAAGAGCTGGAGACAGCC+AGG | 0.471536 | 7.3:-73559471 | MS.gene001874:CDS |
GCTAACGATTCCATGTTCAA+TGG | 0.473865 | 7.3:+73560381 | None:intergenic |
ATGGTGATCACCTGTCCATC+AGG | 0.477697 | 7.3:+73559415 | None:intergenic |
GGAGCCTCAGTTAAAAGCAC+TGG | 0.477920 | 7.3:+73560286 | None:intergenic |
AACACGAAGCTCATTGTAGA+AGG | 0.478617 | 7.3:+73560324 | None:intergenic |
AGAAAATACAGTGTCTGGAT+TGG | 0.479498 | 7.3:-73559139 | MS.gene001874:CDS |
AAGGCAGAATATGATGAATC+TGG | 0.482638 | 7.3:-73558562 | MS.gene001874:CDS |
CTATCATAGATGGTTGGAAC+AGG | 0.482778 | 7.3:+73559362 | None:intergenic |
CTCAAATACCCCATTGAACA+TGG | 0.487849 | 7.3:-73560391 | MS.gene001874:CDS |
AAATACAGTGTCTGGATTGG+AGG | 0.490757 | 7.3:-73559136 | MS.gene001874:CDS |
ATCCTTCGTCTTGATCTGGC+TGG | 0.494460 | 7.3:-73559619 | MS.gene001874:CDS |
TGAATAGCAACATACATAGC+AGG | 0.510580 | 7.3:+73560202 | None:intergenic |
GCTCTTCTCGACGGATGAGC+TGG | 0.511637 | 7.3:+73559447 | None:intergenic |
ACGAGGACGACCTACAATGC+TGG | 0.512907 | 7.3:+73560495 | None:intergenic |
AGACGAGCGTTTCAGATGTC+CGG | 0.524785 | 7.3:-73559389 | MS.gene001874:CDS |
CTTGATCTTCATGCTACTTG+GGG | 0.525749 | 7.3:+73559180 | None:intergenic |
GACGAAGGATGGCATGTGGA+AGG | 0.532459 | 7.3:+73559632 | None:intergenic |
TCTGAAACGCTCGTCTCCGA+TGG | 0.533062 | 7.3:+73559396 | None:intergenic |
TCCTCGTCACACTGGTGTGA+TGG | 0.533985 | 7.3:-73560479 | MS.gene001874:CDS |
ATTGTGTTGGATTCTGGTGA+TGG | 0.535950 | 7.3:-73559691 | MS.gene001874:CDS |
GTCAGCAATGCCTGGGAACA+TGG | 0.536051 | 7.3:+73559231 | None:intergenic |
CGTTAGCAACTGGGACGACA+TGG | 0.537257 | 7.3:-73560365 | MS.gene001874:CDS |
GGGCATAACCCTCGTAGATA+GGG | 0.538631 | 7.3:+73559653 | None:intergenic |
AACAATTTCACGCTCTGCTG+AGG | 0.540758 | 7.3:+73559537 | None:intergenic |
CCAGCTCTTGCTCATAGTCA+AGG | 0.540763 | 7.3:+73559482 | None:intergenic |
CTTACCGGTGGTACGACCAC+TGG | 0.540927 | 7.3:+73560159 | None:intergenic |
CCCAAGTAGCATGAAGATCA+AGG | 0.546192 | 7.3:-73559179 | MS.gene001874:CDS |
CCATTCCTATCATAGATGGT+TGG | 0.552199 | 7.3:+73559356 | None:intergenic |
CGAGGACGACCTACAATGCT+GGG | 0.552606 | 7.3:+73560496 | None:intergenic |
AGCCAGATCAAGACGAAGGA+TGG | 0.553433 | 7.3:+73559621 | None:intergenic |
ATCAACATCGCACTTCATGA+TGG | 0.558200 | 7.3:+73559300 | None:intergenic |
ATGATAGGAATGGAAGCAGC+AGG | 0.559211 | 7.3:-73559346 | MS.gene001874:CDS |
CCAACCATCTATGATAGGAA+TGG | 0.569599 | 7.3:-73559356 | MS.gene001874:CDS |
TCATTCTGTCAGCAATGCCT+GGG | 0.569632 | 7.3:+73559224 | None:intergenic |
GGAGGAACAACCATGTTCCC+AGG | 0.570238 | 7.3:-73559241 | MS.gene001874:CDS |
ACATGGAATCGTTAGCAACT+GGG | 0.574134 | 7.3:-73560374 | MS.gene001874:CDS |
AAGCACTGGGTGTTCTTCTG+GGG | 0.574143 | 7.3:+73560300 | None:intergenic |
CAGCTTAGAAGCACTTTCTG+TGG | 0.575188 | 7.3:+73558527 | None:intergenic |
GAATAGCAACATACATAGCA+GGG | 0.577899 | 7.3:+73560203 | None:intergenic |
AATTTCACGCTCTGCTGAGG+TGG | 0.580226 | 7.3:+73559540 | None:intergenic |
CGATTGGCCTTAGGGTTGAG+AGG | 0.589725 | 7.3:+73560265 | None:intergenic |
ACGAAGGATGGCATGTGGAA+GGG | 0.591719 | 7.3:+73559633 | None:intergenic |
GGTGCTAAGAGATGCCAAGA+TGG | 0.593241 | 7.3:+73559111 | None:intergenic |
GATGGTTGGAACAGGACCTC+CGG | 0.593491 | 7.3:+73559370 | None:intergenic |
AAGAGCTACGAATTGCCTGA+TGG | 0.595436 | 7.3:-73559430 | MS.gene001874:CDS |
TGAGGCTCCTCTCAACCCTA+AGG | 0.595543 | 7.3:-73560272 | MS.gene001874:CDS |
CGTCACACTGGTGTGATGGT+TGG | 0.597543 | 7.3:-73560475 | MS.gene001874:CDS |
ACTGGTGTGATGGTTGGCAT+GGG | 0.600381 | 7.3:-73560469 | MS.gene001874:CDS |
GATATCAGGAAAGACTTGTA+CGG | 0.601211 | 7.3:-73559280 | MS.gene001874:CDS |
GATGGACAGGTGATCACCAT+CGG | 0.601892 | 7.3:-73559412 | MS.gene001874:CDS |
TACGCCAGTGGTCGTACCAC+CGG | 0.602745 | 7.3:-73560163 | MS.gene001874:intron |
TTGTGACAATGGAACTGGAA+TGG | 0.606936 | 7.3:-73561096 | MS.gene001874:CDS |
CAGCTCTTGCTCATAGTCAA+GGG | 0.607358 | 7.3:+73559483 | None:intergenic |
CCTTGACTATGAGCAAGAGC+TGG | 0.608691 | 7.3:-73559482 | MS.gene001874:CDS |
GTTCCATTGTCACAAACAAG+AGG | 0.610975 | 7.3:+73561104 | None:intergenic |
TCTTCATCAAGAAATCGGTA+AGG | 0.614013 | 7.3:+73559590 | None:intergenic |
AACAAAACAAACCTGCTGGA+AGG | 0.616042 | 7.3:+73559090 | None:intergenic |
GAGCCTCAGTTAAAAGCACT+GGG | 0.616759 | 7.3:+73560287 | None:intergenic |
CTTCATGATGGAGTTGTATG+TGG | 0.618935 | 7.3:+73559312 | None:intergenic |
TGATGAGGCACAGTCCAAGA+GGG | 0.621032 | 7.3:-73560425 | MS.gene001874:CDS |
CATTGCTGACAGAATGAGCA+AGG | 0.623432 | 7.3:-73559218 | MS.gene001874:CDS |
ATGCTGGGAAACACAGCACG+AGG | 0.626971 | 7.3:+73560511 | None:intergenic |
AGTACAGATGTGGATTGCAA+AGG | 0.627417 | 7.3:-73558581 | MS.gene001874:intron |
GTAGGTCGTCCTCGTCACAC+TGG | 0.629317 | 7.3:-73560487 | MS.gene001874:CDS |
GGTAACATTGTGCTTTCAGG+AGG | 0.633227 | 7.3:-73559259 | MS.gene001874:CDS |
GCTGGGAAACACAGCACGAG+GGG | 0.634384 | 7.3:+73560513 | None:intergenic |
GTTCTTTCACTGTACGCCAG+TGG | 0.634859 | 7.3:-73560175 | MS.gene001874:CDS |
TGCTGGGAAACACAGCACGA+GGG | 0.642727 | 7.3:+73560512 | None:intergenic |
GTGATGAGGCACAGTCCAAG+AGG | 0.652823 | 7.3:-73560426 | MS.gene001874:CDS |
ACTGGCGTACAGTGAAAGAA+CGG | 0.656927 | 7.3:+73560177 | None:intergenic |
TCAAGACGAAGGATGGCATG+TGG | 0.658783 | 7.3:+73559628 | None:intergenic |
ACCATCACACCAGTGTGACG+AGG | 0.660573 | 7.3:+73560478 | None:intergenic |
AGATGCATATGTTGGTGATG+AGG | 0.661651 | 7.3:-73560440 | MS.gene001874:CDS |
CCATACTGTCCCTATCTACG+AGG | 0.672368 | 7.3:-73559662 | MS.gene001874:CDS |
CAATTCGTAGCTCTTCTCGA+CGG | 0.674512 | 7.3:+73559438 | None:intergenic |
GATGAGGCACAGTCCAAGAG+GGG | 0.682041 | 7.3:-73560424 | MS.gene001874:CDS |
GTAGACGATGGCAGACGCTG+AGG | 0.683003 | 7.3:-73561135 | None:intergenic |
AATAGCAACATACATAGCAG+GGG | 0.691158 | 7.3:+73560204 | None:intergenic |
CGAGCGTTTCAGATGTCCGG+AGG | 0.696555 | 7.3:-73559386 | MS.gene001874:CDS |
GACCAGCCAGATCAAGACGA+AGG | 0.700093 | 7.3:+73559617 | None:intergenic |
CATACTGTCCCTATCTACGA+GGG | 0.714771 | 7.3:-73559661 | MS.gene001874:CDS |
TAACGATTCCATGTTCAATG+GGG | 0.715992 | 7.3:+73560383 | None:intergenic |
AAGTAGCATGAAGATCAAGG+TGG | 0.766332 | 7.3:-73559176 | MS.gene001874:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTATATATAATGTTATTATA+TGG | - | chr7.3:73560614-73560633 | MS.gene001874:intron | 10.0% |
!!! | AAAACTTAATAAGCTATTTT+TGG | - | chr7.3:73560761-73560780 | MS.gene001874:intron | 15.0% |
!!! | ATTGAGAATTTTCAAATTTA+GGG | + | chr7.3:73560683-73560702 | None:intergenic | 15.0% |
!!! | GATTAGATTTTTTATTATGT+GGG | - | chr7.3:73559540-73559559 | MS.gene001874:CDS | 15.0% |
!!! | TATTAGCTTATAATTTTGTT+AGG | - | chr7.3:73558910-73558929 | MS.gene001874:intron | 15.0% |
!!! | TGATTAGATTTTTTATTATG+TGG | - | chr7.3:73559539-73559558 | MS.gene001874:CDS | 15.0% |
!! | AAATGTTGTTAGAAAGTAAA+CGG | - | chr7.3:73559765-73559784 | MS.gene001874:intron | 20.0% |
!! | AACACAAAACAAAACAATTT+AGG | + | chr7.3:73559793-73559812 | None:intergenic | 20.0% |
!! | ATTAAGCTATTTATTCAAAG+AGG | - | chr7.3:73560924-73560943 | MS.gene001874:intron | 20.0% |
!! | TTAAGCTATTTATTCAAAGA+GGG | - | chr7.3:73560925-73560944 | MS.gene001874:intron | 20.0% |
!!! | AGAAATGATCTTATTGTTTT+TGG | - | chr7.3:73558595-73558614 | MS.gene001874:intron | 20.0% |
!!! | CTATTTTCTCAAATTCAATT+AGG | + | chr7.3:73559084-73559103 | None:intergenic | 20.0% |
!!! | GATTGAGAATTTTCAAATTT+AGG | + | chr7.3:73560684-73560703 | None:intergenic | 20.0% |
!!! | TTTATAAATTCCGAGTTTTA+GGG | + | chr7.3:73560655-73560674 | None:intergenic | 20.0% |
!!! | TTTCATTTGCAAATTTTACT+TGG | + | chr7.3:73559747-73559766 | None:intergenic | 20.0% |
!!! | TTTTATAAATTCCGAGTTTT+AGG | + | chr7.3:73560656-73560675 | None:intergenic | 20.0% |
! | AAAAGGACTAATATGATAGA+AGG | - | chr7.3:73560964-73560983 | MS.gene001874:intron | 25.0% |
! | AATAGAGATTCATATCAATC+GGG | + | chr7.3:73558681-73558700 | None:intergenic | 25.0% |
! | AATGTTGTTAGAAAGTAAAC+GGG | - | chr7.3:73559766-73559785 | MS.gene001874:intron | 25.0% |
! | AGACTCAATATATATTCCAT+TGG | - | chr7.3:73561032-73561051 | MS.gene001874:intron | 25.0% |
! | ATTCTCTATCATAATTGAAG+AGG | - | chr7.3:73559683-73559702 | MS.gene001874:CDS | 25.0% |
! | CAAAATCTTCATCAAGAAAT+CGG | + | chr7.3:73560077-73560096 | None:intergenic | 25.0% |
! | CAATAGAGATTCATATCAAT+CGG | + | chr7.3:73558682-73558701 | None:intergenic | 25.0% |
! | GTCATAAATCAAATGACAAA+TGG | + | chr7.3:73558854-73558873 | None:intergenic | 25.0% |
! | TAACTTATACATAAGCGTTA+TGG | - | chr7.3:73560877-73560896 | MS.gene001874:intron | 25.0% |
! | TATTGAGTCTATGAAATTGT+AGG | + | chr7.3:73561022-73561041 | None:intergenic | 25.0% |
!! | ACTAAGTTGACAAAAACAAA+AGG | + | chr7.3:73558823-73558842 | None:intergenic | 25.0% |
!! | TTCTATCATATTAGTCCTTT+TGG | + | chr7.3:73560965-73560984 | None:intergenic | 25.0% |
!!! | TTATAAATTCCGAGTTTTAG+GGG | + | chr7.3:73560654-73560673 | None:intergenic | 25.0% |
AGTTGACAAAAACAAAAGGT+TGG | + | chr7.3:73558819-73558838 | None:intergenic | 30.0% | |
ATTATATGGCATTGCTAACT+AGG | - | chr7.3:73560628-73560647 | MS.gene001874:intron | 30.0% | |
CTTATTTCCATAAGTTCTCT+AGG | - | chr7.3:73560784-73560803 | MS.gene001874:intron | 30.0% | |
GAGATTCTTCATAGAGAATT+GGG | + | chr7.3:73558758-73558777 | None:intergenic | 30.0% | |
GCAGTTAAAAAATGACTTAC+CGG | + | chr7.3:73559518-73559537 | None:intergenic | 30.0% | |
TAGTTATCCTAGAGAACTTA+TGG | + | chr7.3:73560794-73560813 | None:intergenic | 30.0% | |
TCATAATGCAGTACTTTAGT+TGG | - | chr7.3:73559029-73559048 | MS.gene001874:intron | 30.0% | |
! | AAAGTTTGTGTCATTACCAA+TGG | + | chr7.3:73561051-73561070 | None:intergenic | 30.0% |
! | CACTGACTGTTAAAATGAAT+GGG | - | chr7.3:73559822-73559841 | MS.gene001874:intron | 30.0% |
! | TATATTTTCTGTCTCTATGC+AGG | - | chr7.3:73559944-73559963 | MS.gene001874:intron | 30.0% |
! | TCACTGACTGTTAAAATGAA+TGG | - | chr7.3:73559821-73559840 | MS.gene001874:intron | 30.0% |
! | TTTTCTTATGAGTACAGATG+TGG | - | chr7.3:73561068-73561087 | MS.gene001874:intron | 30.0% |
!! | AAGTTCTCTAGGATAACTTA+CGG | - | chr7.3:73560736-73560755 | MS.gene001874:intron | 30.0% |
!!! | TGATCTTATTGTTTTTGGCA+TGG | - | chr7.3:73558600-73558619 | MS.gene001874:intron | 30.0% |
AAGGCAGAATATGATGAATC+TGG | - | chr7.3:73561097-73561116 | MS.gene001874:CDS | 35.0% | |
AATAGCAACATACATAGCAG+GGG | + | chr7.3:73559458-73559477 | None:intergenic | 35.0% | |
AGAAAATACAGTGTCTGGAT+TGG | - | chr7.3:73560520-73560539 | MS.gene001874:CDS | 35.0% | |
CGAGATTCTTCATAGAGAAT+TGG | + | chr7.3:73558759-73558778 | None:intergenic | 35.0% | |
CTAACGATTCCATGTTCAAT+GGG | + | chr7.3:73559280-73559299 | None:intergenic | 35.0% | |
GAATAGCAACATACATAGCA+GGG | + | chr7.3:73559459-73559478 | None:intergenic | 35.0% | |
GAGAAAGCGATAAACAAGAA+AGG | + | chr7.3:73560595-73560614 | None:intergenic | 35.0% | |
GAGGAAAATCTACAACCAAA+TGG | - | chr7.3:73559702-73559721 | MS.gene001874:intron | 35.0% | |
GATATCAGGAAAGACTTGTA+CGG | - | chr7.3:73560379-73560398 | MS.gene001874:CDS | 35.0% | |
GGTCAAAAAGATGCATATGT+TGG | - | chr7.3:73559211-73559230 | MS.gene001874:CDS | 35.0% | |
GTAAGTTATCCTAGAGAACT+TGG | + | chr7.3:73560737-73560756 | None:intergenic | 35.0% | |
GTATTCAGAAGCTATGATTG+TGG | - | chr7.3:73559870-73559889 | MS.gene001874:intron | 35.0% | |
GTTAAAAAATGACTTACCGG+TGG | + | chr7.3:73559515-73559534 | None:intergenic | 35.0% | |
TAACGATTCCATGTTCAATG+GGG | + | chr7.3:73559279-73559298 | None:intergenic | 35.0% | |
TCTTCATCAAGAAATCGGTA+AGG | + | chr7.3:73560072-73560091 | None:intergenic | 35.0% | |
TGAATAGCAACATACATAGC+AGG | + | chr7.3:73559460-73559479 | None:intergenic | 35.0% | |
TGGGATTCATCGTAATGAAT+CGG | + | chr7.3:73558739-73558758 | None:intergenic | 35.0% | |
TTCATGATATGATCTCGAGT+TGG | - | chr7.3:73558967-73558986 | MS.gene001874:intron | 35.0% | |
! | AATTTTACTTGGCAAGTCTG+TGG | + | chr7.3:73559736-73559755 | None:intergenic | 35.0% |
! | ACACTAGAGAGAATGCATTT+TGG | + | chr7.3:73559653-73559672 | None:intergenic | 35.0% |
! | AGATTCCGATTTCTCTTTTC+AGG | - | chr7.3:73559102-73559121 | MS.gene001874:CDS | 35.0% |
! | TCCTTTTGGATCAGTCATTT+AGG | + | chr7.3:73560951-73560970 | None:intergenic | 35.0% |
! | TGCTATGTATGTTGCTATTC+AGG | - | chr7.3:73559459-73559478 | MS.gene001874:CDS | 35.0% |
!!! | ATGAAGATTTTGACTGAACG+TGG | - | chr7.3:73560085-73560104 | MS.gene001874:intron | 35.0% |
AACAAAACAAACCTGCTGGA+AGG | + | chr7.3:73560572-73560591 | None:intergenic | 40.0% | |
AACACGAAGCTCATTGTAGA+AGG | + | chr7.3:73559338-73559357 | None:intergenic | 40.0% | |
AACATGGAATCGTTAGCAAC+TGG | - | chr7.3:73559284-73559303 | MS.gene001874:CDS | 40.0% | |
AAGGAACAAAACAAACCTGC+TGG | + | chr7.3:73560576-73560595 | None:intergenic | 40.0% | |
AAGTAGCATGAAGATCAAGG+TGG | - | chr7.3:73560483-73560502 | MS.gene001874:CDS | 40.0% | |
AAGTAGCTTCTGTGAGAAGT+AGG | - | chr7.3:73559845-73559864 | MS.gene001874:intron | 40.0% | |
ACATGGAATCGTTAGCAACT+GGG | - | chr7.3:73559285-73559304 | MS.gene001874:CDS | 40.0% | |
ACCTTGATCTTCATGCTACT+TGG | + | chr7.3:73560484-73560503 | None:intergenic | 40.0% | |
ATCAACATCGCACTTCATGA+TGG | + | chr7.3:73560362-73560381 | None:intergenic | 40.0% | |
ATTGTGTTGGATTCTGGTGA+TGG | - | chr7.3:73559968-73559987 | MS.gene001874:intron | 40.0% | |
CAATGGAACTGGAATGGTTA+AGG | - | chr7.3:73558569-73558588 | MS.gene001874:CDS | 40.0% | |
CACTTTCTGTGGACAATTGA+TGG | + | chr7.3:73561124-73561143 | None:intergenic | 40.0% | |
CCAACCATCTATGATAGGAA+TGG | - | chr7.3:73560303-73560322 | MS.gene001874:CDS | 40.0% | |
CCATTCCTATCATAGATGGT+TGG | + | chr7.3:73560306-73560325 | None:intergenic | 40.0% | |
CTATCATAGATGGTTGGAAC+AGG | + | chr7.3:73560300-73560319 | None:intergenic | 40.0% | |
CTCAAATACCCCATTGAACA+TGG | - | chr7.3:73559268-73559287 | MS.gene001874:CDS | 40.0% | |
CTGAGAGAAAATACAGTGTC+TGG | - | chr7.3:73560515-73560534 | MS.gene001874:CDS | 40.0% | |
CTGTTCCAACCATCTATGAT+AGG | - | chr7.3:73560298-73560317 | MS.gene001874:CDS | 40.0% | |
CTTGTTTGTGACAATGGAAC+TGG | - | chr7.3:73558558-73558577 | MS.gene001874:CDS | 40.0% | |
GACACGCTAAGTTTAGGTAA+TGG | + | chr7.3:73558797-73558816 | None:intergenic | 40.0% | |
GAGCAAGGAAATTTCTGCTT+TGG | - | chr7.3:73560456-73560475 | MS.gene001874:CDS | 40.0% | |
GCCTAAATGACTGATCCAAA+AGG | - | chr7.3:73560947-73560966 | MS.gene001874:intron | 40.0% | |
GCTAACGATTCCATGTTCAA+TGG | + | chr7.3:73559281-73559300 | None:intergenic | 40.0% | |
GCTTCCATTCCTATCATAGA+TGG | + | chr7.3:73560310-73560329 | None:intergenic | 40.0% | |
GGATTCATCGTAATGAATCG+GGG | + | chr7.3:73558737-73558756 | None:intergenic | 40.0% | |
GGGATTCATCGTAATGAATC+GGG | + | chr7.3:73558738-73558757 | None:intergenic | 40.0% | |
GTTCCATTGTCACAAACAAG+AGG | + | chr7.3:73558558-73558577 | None:intergenic | 40.0% | |
TACGGTAACATTGTGCTTTC+AGG | - | chr7.3:73560397-73560416 | MS.gene001874:CDS | 40.0% | |
TCCAGCCTGAAAAGAGAAAT+CGG | + | chr7.3:73559110-73559129 | None:intergenic | 40.0% | |
TGAAGTGCGATGTTGATATC+AGG | - | chr7.3:73560365-73560384 | MS.gene001874:CDS | 40.0% | |
TTGAGTCATCTTCTCACGAT+TGG | + | chr7.3:73559413-73559432 | None:intergenic | 40.0% | |
TTGTGACAATGGAACTGGAA+TGG | - | chr7.3:73558563-73558582 | MS.gene001874:CDS | 40.0% | |
TTTCAGAGACCAAGTTCTCT+AGG | - | chr7.3:73560725-73560744 | MS.gene001874:intron | 40.0% | |
! | AAATACAGTGTCTGGATTGG+AGG | - | chr7.3:73560523-73560542 | MS.gene001874:CDS | 40.0% |
! | ACACTGTATTTTCTCTCAGG+TGG | + | chr7.3:73560514-73560533 | None:intergenic | 40.0% |
! | AGTACAGATGTGGATTGCAA+AGG | - | chr7.3:73561078-73561097 | MS.gene001874:intron | 40.0% |
! | CAACCTCTTGTTTGTGACAA+TGG | - | chr7.3:73558552-73558571 | MS.gene001874:CDS | 40.0% |
! | CAGACACTGTATTTTCTCTC+AGG | + | chr7.3:73560517-73560536 | None:intergenic | 40.0% |
! | CCTTGATCTTCATGCTACTT+GGG | + | chr7.3:73560483-73560502 | None:intergenic | 40.0% |
! | CTTCATGATGGAGTTGTATG+TGG | + | chr7.3:73560350-73560369 | None:intergenic | 40.0% |
! | CTTGATCTTCATGCTACTTG+GGG | + | chr7.3:73560482-73560501 | None:intergenic | 40.0% |
! | TCTCTATGCAGGTATTGTGT+TGG | - | chr7.3:73559955-73559974 | MS.gene001874:intron | 40.0% |
!! | AGATGCATATGTTGGTGATG+AGG | - | chr7.3:73559219-73559238 | MS.gene001874:CDS | 40.0% |
AACAATTTCACGCTCTGCTG+AGG | + | chr7.3:73560125-73560144 | None:intergenic | 45.0% | |
AAGAGCTACGAATTGCCTGA+TGG | - | chr7.3:73560229-73560248 | MS.gene001874:CDS | 45.0% | |
ACTGGCGTACAGTGAAAGAA+CGG | + | chr7.3:73559485-73559504 | None:intergenic | 45.0% | |
AGGTTGGACACGCTAAGTTT+AGG | + | chr7.3:73558803-73558822 | None:intergenic | 45.0% | |
ATGATAGGAATGGAAGCAGC+AGG | - | chr7.3:73560313-73560332 | MS.gene001874:CDS | 45.0% | |
CAATTCGTAGCTCTTCTCGA+CGG | + | chr7.3:73560224-73560243 | None:intergenic | 45.0% | |
CAGCTCTTGCTCATAGTCAA+GGG | + | chr7.3:73560179-73560198 | None:intergenic | 45.0% | |
CATACTGTCCCTATCTACGA+GGG | - | chr7.3:73559998-73560017 | MS.gene001874:intron | 45.0% | |
CATTGCTGACAGAATGAGCA+AGG | - | chr7.3:73560441-73560460 | MS.gene001874:CDS | 45.0% | |
CCCAAGTAGCATGAAGATCA+AGG | - | chr7.3:73560480-73560499 | MS.gene001874:CDS | 45.0% | |
CTAACTAGGCCCCTAAAACT+CGG | - | chr7.3:73560642-73560661 | MS.gene001874:intron | 45.0% | |
GAGAGTCAAAATACCCCTCT+TGG | + | chr7.3:73559251-73559270 | None:intergenic | 45.0% | |
GGGACGACATGGAAAAGATT+TGG | - | chr7.3:73559305-73559324 | MS.gene001874:CDS | 45.0% | |
GGTAACATTGTGCTTTCAGG+AGG | - | chr7.3:73560400-73560419 | MS.gene001874:CDS | 45.0% | |
TCATTCTGTCAGCAATGCCT+GGG | + | chr7.3:73560438-73560457 | None:intergenic | 45.0% | |
! | GCAGGTATTGTGTTGGATTC+TGG | - | chr7.3:73559962-73559981 | MS.gene001874:intron | 45.0% |
!! | AAAAGCACTGGGTGTTCTTC+TGG | + | chr7.3:73559364-73559383 | None:intergenic | 45.0% |
!! | AAAGCACTGGGTGTTCTTCT+GGG | + | chr7.3:73559363-73559382 | None:intergenic | 45.0% |
!! | ACACCCAGTGCTTTTAACTG+AGG | - | chr7.3:73559369-73559388 | MS.gene001874:CDS | 45.0% |
!! | ATCTTCTCACGATTGGCCTT+AGG | + | chr7.3:73559406-73559425 | None:intergenic | 45.0% |
!! | GAGCCTCAGTTAAAAGCACT+GGG | + | chr7.3:73559375-73559394 | None:intergenic | 45.0% |
!! | TCCGATTTCTCTTTTCAGGC+TGG | - | chr7.3:73559106-73559125 | MS.gene001874:CDS | 45.0% |
!! | TCTTCTCACGATTGGCCTTA+GGG | + | chr7.3:73559405-73559424 | None:intergenic | 45.0% |
!! | TCTTTTCAGGCTGGATTTGC+TGG | - | chr7.3:73559115-73559134 | MS.gene001874:CDS | 45.0% |
!! | TGATCTCGAGTTGGTAAGCA+TGG | - | chr7.3:73558976-73558995 | MS.gene001874:intron | 45.0% |
AATTTCACGCTCTGCTGAGG+TGG | + | chr7.3:73560122-73560141 | None:intergenic | 50.0% | |
ACGAAGGATGGCATGTGGAA+GGG | + | chr7.3:73560029-73560048 | None:intergenic | 50.0% | |
ACTGGTGTGATGGTTGGCAT+GGG | - | chr7.3:73559190-73559209 | MS.gene001874:CDS | 50.0% | |
AGACGAGCGTTTCAGATGTC+CGG | - | chr7.3:73560270-73560289 | MS.gene001874:CDS | 50.0% | |
AGCCAGATCAAGACGAAGGA+TGG | + | chr7.3:73560041-73560060 | None:intergenic | 50.0% | |
AGGGCATAACCCTCGTAGAT+AGG | + | chr7.3:73560010-73560029 | None:intergenic | 50.0% | |
ATCCTTCGTCTTGATCTGGC+TGG | - | chr7.3:73560040-73560059 | MS.gene001874:intron | 50.0% | |
ATCTCTTAGCACCTTCCAGC+AGG | - | chr7.3:73560558-73560577 | MS.gene001874:intron | 50.0% | |
ATGGTGATCACCTGTCCATC+AGG | + | chr7.3:73560247-73560266 | None:intergenic | 50.0% | |
CCAGCTCTTGCTCATAGTCA+AGG | + | chr7.3:73560180-73560199 | None:intergenic | 50.0% | |
CCATACTGTCCCTATCTACG+AGG | - | chr7.3:73559997-73560016 | MS.gene001874:intron | 50.0% | |
CCTCGTAGATAGGGACAGTA+TGG | + | chr7.3:73560000-73560019 | None:intergenic | 50.0% | |
CCTTGACTATGAGCAAGAGC+TGG | - | chr7.3:73560177-73560196 | MS.gene001874:CDS | 50.0% | |
CTCATTCTGTCAGCAATGCC+TGG | + | chr7.3:73560439-73560458 | None:intergenic | 50.0% | |
GATGGACAGGTGATCACCAT+CGG | - | chr7.3:73560247-73560266 | MS.gene001874:CDS | 50.0% | |
GCTGTGTTTCCCAGCATTGT+AGG | - | chr7.3:73559154-73559173 | MS.gene001874:CDS | 50.0% | |
GGGCATAACCCTCGTAGATA+GGG | + | chr7.3:73560009-73560028 | None:intergenic | 50.0% | |
GGTGCTAAGAGATGCCAAGA+TGG | + | chr7.3:73560551-73560570 | None:intergenic | 50.0% | |
GTTCTTTCACTGTACGCCAG+TGG | - | chr7.3:73559484-73559503 | MS.gene001874:CDS | 50.0% | |
TCAAGACGAAGGATGGCATG+TGG | + | chr7.3:73560034-73560053 | None:intergenic | 50.0% | |
TCTGTGGCTGGAATGCCATT+TGG | + | chr7.3:73559720-73559739 | None:intergenic | 50.0% | |
TGATGAGGCACAGTCCAAGA+GGG | - | chr7.3:73559234-73559253 | MS.gene001874:CDS | 50.0% | |
TGCCATCCTTCGTCTTGATC+TGG | - | chr7.3:73560036-73560055 | MS.gene001874:intron | 50.0% | |
TTACTTGGCAAGTCTGTGGC+TGG | + | chr7.3:73559732-73559751 | None:intergenic | 50.0% | |
! | CTACGAATTGCCTGATGGAC+AGG | - | chr7.3:73560234-73560253 | MS.gene001874:CDS | 50.0% |
! | CTGGATTGGAGGTTCCATCT+TGG | - | chr7.3:73560534-73560553 | MS.gene001874:CDS | 50.0% |
! | GGAGCCTCAGTTAAAAGCAC+TGG | + | chr7.3:73559376-73559395 | None:intergenic | 50.0% |
!! | AAGCACTGGGTGTTCTTCTG+GGG | + | chr7.3:73559362-73559381 | None:intergenic | 50.0% |
ACCATCACACCAGTGTGACG+AGG | + | chr7.3:73559184-73559203 | None:intergenic | 55.0% | |
ACGAGGACGACCTACAATGC+TGG | + | chr7.3:73559167-73559186 | None:intergenic | 55.0% | |
ATGCTGGGAAACACAGCACG+AGG | + | chr7.3:73559151-73559170 | None:intergenic | 55.0% | |
CACTGGTGTGATGGTTGGCA+TGG | - | chr7.3:73559189-73559208 | MS.gene001874:CDS | 55.0% | |
CGAGGACGACCTACAATGCT+GGG | + | chr7.3:73559166-73559185 | None:intergenic | 55.0% | |
CGTCACACTGGTGTGATGGT+TGG | - | chr7.3:73559184-73559203 | MS.gene001874:CDS | 55.0% | |
CGTTAGCAACTGGGACGACA+TGG | - | chr7.3:73559294-73559313 | MS.gene001874:CDS | 55.0% | |
GACCAGCCAGATCAAGACGA+AGG | + | chr7.3:73560045-73560064 | None:intergenic | 55.0% | |
GACGAAGGATGGCATGTGGA+AGG | + | chr7.3:73560030-73560049 | None:intergenic | 55.0% | |
GATGAGGCACAGTCCAAGAG+GGG | - | chr7.3:73559235-73559254 | MS.gene001874:CDS | 55.0% | |
GATGGTTGGAACAGGACCTC+CGG | + | chr7.3:73560292-73560311 | None:intergenic | 55.0% | |
GGAGGAACAACCATGTTCCC+AGG | - | chr7.3:73560418-73560437 | MS.gene001874:CDS | 55.0% | |
GTCAGCAATGCCTGGGAACA+TGG | + | chr7.3:73560431-73560450 | None:intergenic | 55.0% | |
GTGATGAGGCACAGTCCAAG+AGG | - | chr7.3:73559233-73559252 | MS.gene001874:CDS | 55.0% | |
TCCTCGTCACACTGGTGTGA+TGG | - | chr7.3:73559180-73559199 | MS.gene001874:CDS | 55.0% | |
TGAGGCTCCTCTCAACCCTA+AGG | - | chr7.3:73559387-73559406 | MS.gene001874:CDS | 55.0% | |
TGCTGGGAAACACAGCACGA+GGG | + | chr7.3:73559150-73559169 | None:intergenic | 55.0% | |
! | TCTGAAACGCTCGTCTCCGA+TGG | + | chr7.3:73560266-73560285 | None:intergenic | 55.0% |
!! | CGATTGGCCTTAGGGTTGAG+AGG | + | chr7.3:73559397-73559416 | None:intergenic | 55.0% |
AGCAAGAGCTGGAGACAGCC+AGG | - | chr7.3:73560188-73560207 | MS.gene001874:CDS | 60.0% | |
CGAGCGTTTCAGATGTCCGG+AGG | - | chr7.3:73560273-73560292 | MS.gene001874:CDS | 60.0% | |
CTTACCGGTGGTACGACCAC+TGG | + | chr7.3:73559503-73559522 | None:intergenic | 60.0% | |
GCTCTTCTCGACGGATGAGC+TGG | + | chr7.3:73560215-73560234 | None:intergenic | 60.0% | |
GCTGGGAAACACAGCACGAG+GGG | + | chr7.3:73559149-73559168 | None:intergenic | 60.0% | |
GTAGGTCGTCCTCGTCACAC+TGG | - | chr7.3:73559172-73559191 | MS.gene001874:CDS | 60.0% | |
TACGCCAGTGGTCGTACCAC+CGG | - | chr7.3:73559496-73559515 | MS.gene001874:CDS | 60.0% | |
CTCGACGGATGAGCTGGTCC+TGG | + | chr7.3:73560209-73560228 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 73558531 | 73561150 | 73558531 | ID=MS.gene001874 |
chr7.3 | mRNA | 73558531 | 73561150 | 73558531 | ID=MS.gene001874.t1;Parent=MS.gene001874 |
chr7.3 | exon | 73561091 | 73561150 | 73561091 | ID=MS.gene001874.t1.exon1;Parent=MS.gene001874.t1 |
chr7.3 | CDS | 73561091 | 73561150 | 73561091 | ID=cds.MS.gene001874.t1;Parent=MS.gene001874.t1 |
chr7.3 | exon | 73560164 | 73560557 | 73560164 | ID=MS.gene001874.t1.exon2;Parent=MS.gene001874.t1 |
chr7.3 | CDS | 73560164 | 73560557 | 73560164 | ID=cds.MS.gene001874.t1;Parent=MS.gene001874.t1 |
chr7.3 | exon | 73559102 | 73559715 | 73559102 | ID=MS.gene001874.t1.exon3;Parent=MS.gene001874.t1 |
chr7.3 | CDS | 73559102 | 73559715 | 73559102 | ID=cds.MS.gene001874.t1;Parent=MS.gene001874.t1 |
chr7.3 | exon | 73558531 | 73558596 | 73558531 | ID=MS.gene001874.t1.exon4;Parent=MS.gene001874.t1 |
chr7.3 | CDS | 73558531 | 73558596 | 73558531 | ID=cds.MS.gene001874.t1;Parent=MS.gene001874.t1 |
Gene Sequence |
Protein sequence |