Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79962.t1 | XP_003622019.1 | 100 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 2.80E-217 | 764.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79962.t1 | P53496 | 97.6 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 2.6e-216 | 752.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79962.t1 | G7L017 | 100.0 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 2.0e-217 | 764.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049757 | MS.gene79962 | -0.80255 | 5.32E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene79962 | -0.832813 | 7.63E-56 | -1.69E-46 |
| MS.gene050133 | MS.gene79962 | 0.851345 | 9.43E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene79962 | 0.846564 | 2.01E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene79962 | 0.808267 | 3.37E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene79962 | -0.814079 | 1.85E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene79962 | -0.811403 | 7.13E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene79962 | 0.802682 | 5.00E-49 | -1.69E-46 |
| MS.gene052469 | MS.gene79962 | -0.858149 | 1.00E-62 | -1.69E-46 |
| MS.gene053330 | MS.gene79962 | -0.819557 | 1.09E-52 | -1.69E-46 |
| MS.gene054107 | MS.gene79962 | -0.815542 | 8.77E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene79962 | 0.815896 | 7.31E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene79962 | -0.806802 | 6.89E-50 | -1.69E-46 |
| MS.gene05556 | MS.gene79962 | -0.838611 | 2.60E-57 | -1.69E-46 |
| MS.gene056233 | MS.gene79962 | -0.803093 | 4.11E-49 | -1.69E-46 |
| MS.gene056633 | MS.gene79962 | -0.801975 | 6.99E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene79962 | -0.803919 | 2.77E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79962.t1 | MTR_7g026230 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 784 |
| MS.gene79962.t1 | MTR_6g004000 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
| MS.gene79962.t1 | MTR_0015s0130 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
| MS.gene79962.t1 | MTR_2g096840 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
| MS.gene79962.t1 | MTR_3g095530 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene79962.t1 | MTR_7g093260 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| MS.gene79962.t1 | MTR_2g008050 | 93.899 | 377 | 23 | 0 | 1 | 377 | 1 | 377 | 0.0 | 751 |
| MS.gene79962.t1 | MTR_7g027185 | 43.272 | 379 | 201 | 3 | 10 | 374 | 7 | 385 | 3.00e-120 | 353 |
| MS.gene79962.t1 | MTR_7g027185 | 44.507 | 355 | 184 | 2 | 10 | 351 | 7 | 361 | 1.13e-117 | 346 |
| MS.gene79962.t1 | MTR_7g027185 | 47.557 | 307 | 159 | 1 | 10 | 314 | 7 | 313 | 5.71e-110 | 324 |
| MS.gene79962.t1 | MTR_5g066400 | 37.360 | 447 | 206 | 12 | 1 | 376 | 1 | 444 | 1.22e-90 | 280 |
| MS.gene79962.t1 | MTR_8g464900 | 36.574 | 432 | 201 | 11 | 1 | 362 | 1 | 429 | 4.02e-84 | 262 |
| MS.gene79962.t1 | MTR_5g066400 | 34.753 | 446 | 191 | 12 | 1 | 376 | 1 | 416 | 5.74e-78 | 246 |
| MS.gene79962.t1 | MTR_8g089630 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.86e-72 | 232 |
| MS.gene79962.t1 | MTR_3g030550 | 38.158 | 380 | 209 | 9 | 7 | 377 | 1 | 363 | 3.11e-70 | 224 |
| MS.gene79962.t1 | MTR_5g066400 | 34.250 | 400 | 192 | 11 | 1 | 332 | 1 | 397 | 1.14e-66 | 217 |
| MS.gene79962.t1 | MTR_2g445210 | 29.314 | 423 | 233 | 8 | 8 | 366 | 6 | 426 | 1.04e-57 | 194 |
| MS.gene79962.t1 | MTR_8g007440 | 32.955 | 264 | 150 | 5 | 77 | 319 | 9 | 266 | 8.37e-44 | 153 |
| MS.gene79962.t1 | MTR_2g445210 | 27.957 | 372 | 202 | 8 | 8 | 315 | 6 | 375 | 9.38e-44 | 155 |
| MS.gene79962.t1 | MTR_3g010170 | 31.313 | 297 | 180 | 9 | 91 | 371 | 179 | 467 | 4.85e-42 | 153 |
| MS.gene79962.t1 | MTR_8g070520 | 31.741 | 293 | 173 | 10 | 91 | 366 | 187 | 469 | 1.40e-37 | 141 |
| MS.gene79962.t1 | MTR_8g070520 | 31.295 | 278 | 165 | 9 | 91 | 352 | 187 | 454 | 2.86e-34 | 132 |
| MS.gene79962.t1 | MTR_3g067945 | 29.365 | 252 | 159 | 7 | 9 | 245 | 21 | 268 | 4.16e-23 | 101 |
| MS.gene79962.t1 | MTR_3g067945 | 33.607 | 122 | 78 | 2 | 250 | 368 | 586 | 707 | 2.57e-15 | 77.8 |
| MS.gene79962.t1 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 340 | 376 | 41 | 77 | 4.15e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79962.t1 | AT3G12110 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 770 |
| MS.gene79962.t1 | AT3G53750 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene79962.t1 | AT3G53750 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene79962.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene79962.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene79962.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene79962.t1 | AT2G37620 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene79962.t1 | AT3G46520 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
| MS.gene79962.t1 | AT3G46520 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
| MS.gene79962.t1 | AT5G09810 | 95.225 | 377 | 18 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
| MS.gene79962.t1 | AT5G59370 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
| MS.gene79962.t1 | AT5G59370 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
| MS.gene79962.t1 | AT1G49240 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
| MS.gene79962.t1 | AT3G18780 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
| MS.gene79962.t1 | AT3G18780 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
| MS.gene79962.t1 | AT3G18780 | 91.643 | 359 | 30 | 0 | 1 | 359 | 1 | 359 | 0.0 | 702 |
| MS.gene79962.t1 | AT2G42100 | 84.783 | 368 | 56 | 0 | 10 | 377 | 11 | 378 | 0.0 | 677 |
| MS.gene79962.t1 | AT2G42090 | 70.541 | 370 | 104 | 1 | 7 | 376 | 1 | 365 | 0.0 | 568 |
| MS.gene79962.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
| MS.gene79962.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
| MS.gene79962.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| MS.gene79962.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| MS.gene79962.t1 | AT2G42170 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 4.65e-132 | 377 |
| MS.gene79962.t1 | AT3G27000 | 43.536 | 379 | 200 | 3 | 10 | 374 | 7 | 385 | 1.01e-121 | 357 |
| MS.gene79962.t1 | AT1G18450 | 37.020 | 443 | 209 | 9 | 1 | 376 | 1 | 440 | 1.03e-93 | 287 |
| MS.gene79962.t1 | AT1G13180 | 34.223 | 412 | 219 | 9 | 10 | 372 | 9 | 417 | 1.10e-72 | 233 |
| MS.gene79962.t1 | AT3G60830 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.06e-67 | 218 |
| MS.gene79962.t1 | AT3G33520 | 30.879 | 421 | 233 | 7 | 10 | 377 | 5 | 420 | 4.81e-61 | 202 |
| MS.gene79962.t1 | AT5G56180 | 32.394 | 284 | 167 | 9 | 91 | 358 | 50 | 324 | 5.98e-37 | 137 |
| MS.gene79962.t1 | AT5G56180 | 32.394 | 284 | 167 | 9 | 91 | 358 | 182 | 456 | 3.36e-36 | 137 |
| MS.gene79962.t1 | AT3G12380 | 31.008 | 258 | 153 | 9 | 9 | 245 | 21 | 274 | 3.63e-26 | 110 |
| MS.gene79962.t1 | AT3G12380 | 33.103 | 145 | 93 | 2 | 228 | 368 | 572 | 716 | 4.69e-16 | 80.5 |
| MS.gene79962.t1 | AT3G12380 | 30.859 | 256 | 150 | 9 | 9 | 245 | 21 | 268 | 1.87e-25 | 108 |
| MS.gene79962.t1 | AT3G12380 | 33.103 | 145 | 93 | 2 | 228 | 368 | 566 | 710 | 4.93e-16 | 80.1 |
| MS.gene79962.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
| MS.gene79962.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
| MS.gene79962.t1 | AT5G56180 | 33.663 | 202 | 111 | 8 | 91 | 281 | 182 | 371 | 6.16e-21 | 93.6 |
| MS.gene79962.t1 | AT1G73910 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.54e-12 | 65.1 |
Find 116 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGGTAACATTGTGCTTTC+AGG | 0.144297 | 7.2:-73046087 | MS.gene79962:CDS |
| AAAAGCACTGGGTGTTCTTC+TGG | 0.181767 | 7.2:+73047126 | None:intergenic |
| TGCTATGTATGTTGCTATTC+AGG | 0.269599 | 7.2:-73047028 | MS.gene79962:CDS |
| GCAGGTATTGTGTTGGATTC+TGG | 0.277388 | 7.2:-73046522 | MS.gene79962:intron |
| CACTTTCTGTGGACAATTGA+TGG | 0.320963 | 7.2:+73045324 | None:intergenic |
| AACATGGAATTGTTAGCAAC+TGG | 0.331750 | 7.2:-73047203 | MS.gene79962:CDS |
| ACCTTGATCTTCATGCTACT+TGG | 0.331858 | 7.2:+73046003 | None:intergenic |
| CTCATTCTGTCAGCAATGCC+TGG | 0.344924 | 7.2:+73046048 | None:intergenic |
| ATCTTCTCACGATTGGCCTT+AGG | 0.347633 | 7.2:+73047084 | None:intergenic |
| GCTGTGTTTCCCAGCATTGT+AGG | 0.369101 | 7.2:-73047333 | MS.gene79962:CDS |
| GAGCAAGGAAATTTCTGCTT+TGG | 0.374975 | 7.2:-73046028 | MS.gene79962:CDS |
| GCTTCCATTCCTATCATAGA+TGG | 0.387544 | 7.2:+73046177 | None:intergenic |
| AGGGCATAACCCTCGTAGAT+AGG | 0.389103 | 7.2:+73046477 | None:intergenic |
| CCTTGATCTTCATGCTACTT+GGG | 0.389144 | 7.2:+73046004 | None:intergenic |
| AAAGCACTGGGTGTTCTTCT+GGG | 0.391378 | 7.2:+73047127 | None:intergenic |
| CTTGTTTGTGACAATGGAAC+TGG | 0.397675 | 7.2:-73047853 | MS.gene79962:CDS |
| CTAACAATTCCATGTTCAAT+GGG | 0.405021 | 7.2:+73047210 | None:intergenic |
| CTGAGAGAAAATACAGTGTC+TGG | 0.408420 | 7.2:-73045969 | MS.gene79962:CDS |
| TCTTCTCACGATTGGCCTTA+GGG | 0.411910 | 7.2:+73047085 | None:intergenic |
| GCTAACAATTCCATGTTCAA+TGG | 0.412844 | 7.2:+73047209 | None:intergenic |
| CAAAATCTTCATCAAGAAAT+CGG | 0.413590 | 7.2:+73046410 | None:intergenic |
| TGCCATCCTTCGTCTTGATC+TGG | 0.418422 | 7.2:-73046448 | MS.gene79962:CDS |
| CTGGATTGGAGGTTCCATCT+TGG | 0.418962 | 7.2:-73045950 | MS.gene79962:CDS |
| CTGTTCCAACCATCTATGAT+AGG | 0.420168 | 7.2:-73046186 | MS.gene79962:CDS |
| TGAAGTGCGATGTTGATATC+AGG | 0.420318 | 7.2:-73046119 | MS.gene79962:CDS |
| TTGAGTCATCTTCTCACGAT+TGG | 0.438247 | 7.2:+73047077 | None:intergenic |
| ATCTCTTAGCACCTTCCAGC+AGG | 0.441982 | 7.2:-73045926 | MS.gene79962:intron |
| CACTGGTGTGATGGTTGGCA+TGG | 0.445024 | 7.2:-73047298 | MS.gene79962:CDS |
| CAACCTCTTGTTTGTGACAA+TGG | 0.449997 | 7.2:-73047859 | MS.gene79962:CDS |
| CAATGGAACTGGAATGGTTA+AGG | 0.450612 | 7.2:-73047842 | MS.gene79962:intron |
| CCTCGTAGATAGGGACAGTA+TGG | 0.450826 | 7.2:+73046487 | None:intergenic |
| CTCGACGGATGAGCTGGTCC+TGG | 0.454464 | 7.2:+73046278 | None:intergenic |
| TCTCTATGCAGGTATTGTGT+TGG | 0.455001 | 7.2:-73046529 | MS.gene79962:intron |
| CTACGAATTGCCTGATGGAC+AGG | 0.461381 | 7.2:-73046250 | MS.gene79962:CDS |
| ATGGTGATCACCTGTCCATC+AGG | 0.477697 | 7.2:+73046240 | None:intergenic |
| GGAGCCTCAGTTAAAAGCAC+TGG | 0.477920 | 7.2:+73047114 | None:intergenic |
| AACACGAAGCTCATTGTAGA+AGG | 0.478617 | 7.2:+73047152 | None:intergenic |
| AGAAAATACAGTGTCTGGAT+TGG | 0.479498 | 7.2:-73045964 | MS.gene79962:CDS |
| AAGGCAGAATATGATGAATC+TGG | 0.482638 | 7.2:-73045348 | MS.gene79962:CDS |
| CTATCATAGATGGTTGGAAC+AGG | 0.482778 | 7.2:+73046187 | None:intergenic |
| AGCAAGAGCTCGAGACAGCC+AGG | 0.483315 | 7.2:-73046296 | MS.gene79962:CDS |
| AAATACAGTGTCTGGATTGG+AGG | 0.490757 | 7.2:-73045961 | MS.gene79962:CDS |
| ATCCTTCGTCTTGATCTGGC+TGG | 0.494460 | 7.2:-73046444 | MS.gene79962:CDS |
| CTTAAATACCCCATTGAACA+TGG | 0.504011 | 7.2:-73047219 | MS.gene79962:CDS |
| TGAATAGCAACATACATAGC+AGG | 0.510580 | 7.2:+73047030 | None:intergenic |
| GCTCTTCTCGACGGATGAGC+TGG | 0.511637 | 7.2:+73046272 | None:intergenic |
| ACGAGGACGACCTACAATGC+TGG | 0.512907 | 7.2:+73047323 | None:intergenic |
| GGGACGACATGGAAAAGATC+TGG | 0.518949 | 7.2:-73047182 | MS.gene79962:CDS |
| AGACGAGCGTTTCAGATGTC+CGG | 0.524785 | 7.2:-73046214 | MS.gene79962:CDS |
| CTTGATCTTCATGCTACTTG+GGG | 0.525749 | 7.2:+73046005 | None:intergenic |
| GACGAAGGATGGCATGTGGA+AGG | 0.532459 | 7.2:+73046457 | None:intergenic |
| TCTGAAACGCTCGTCTCCGA+TGG | 0.533062 | 7.2:+73046221 | None:intergenic |
| TCCTCGTCACACTGGTGTGA+TGG | 0.533985 | 7.2:-73047307 | MS.gene79962:CDS |
| ATTGTGTTGGATTCTGGTGA+TGG | 0.535950 | 7.2:-73046516 | MS.gene79962:CDS |
| GTCAGCAATGCCTGGGAACA+TGG | 0.536051 | 7.2:+73046056 | None:intergenic |
| GGGCATAACCCTCGTAGATA+GGG | 0.538631 | 7.2:+73046478 | None:intergenic |
| CTTACCGGTGGTACGACCAC+TGG | 0.540927 | 7.2:+73046987 | None:intergenic |
| CCCAAGTAGCATGAAGATCA+AGG | 0.546192 | 7.2:-73046004 | MS.gene79962:CDS |
| CGAGCTCTTGCTCATAGTCA+AGG | 0.546253 | 7.2:+73046307 | None:intergenic |
| CCATTCCTATCATAGATGGT+TGG | 0.552199 | 7.2:+73046181 | None:intergenic |
| CGAGGACGACCTACAATGCT+GGG | 0.552606 | 7.2:+73047324 | None:intergenic |
| AACAATTTCTCGCTCTGCTG+AGG | 0.553097 | 7.2:+73046362 | None:intergenic |
| GTGATGAGGCACAGTCTAAG+AGG | 0.553165 | 7.2:-73047254 | MS.gene79962:CDS |
| AGCCAGATCAAGACGAAGGA+TGG | 0.553433 | 7.2:+73046446 | None:intergenic |
| ATCAACATCGCACTTCATGA+TGG | 0.558200 | 7.2:+73046125 | None:intergenic |
| ATGATAGGAATGGAAGCAGC+AGG | 0.559211 | 7.2:-73046171 | MS.gene79962:CDS |
| CCAACCATCTATGATAGGAA+TGG | 0.569599 | 7.2:-73046181 | MS.gene79962:CDS |
| TCATTCTGTCAGCAATGCCT+GGG | 0.569632 | 7.2:+73046049 | None:intergenic |
| GGAGGAACAACCATGTTCCC+AGG | 0.570238 | 7.2:-73046066 | MS.gene79962:CDS |
| AAGCACTGGGTGTTCTTCTG+GGG | 0.574143 | 7.2:+73047128 | None:intergenic |
| AATTTCTCGCTCTGCTGAGG+TGG | 0.575717 | 7.2:+73046365 | None:intergenic |
| GAATAGCAACATACATAGCA+GGG | 0.577899 | 7.2:+73047031 | None:intergenic |
| TGATGAGGCACAGTCTAAGA+GGG | 0.579288 | 7.2:-73047253 | MS.gene79962:CDS |
| CAGCTTAGAAGCACTTTCTG+TGG | 0.581853 | 7.2:+73045313 | None:intergenic |
| TGTTAGCAACTGGGACGACA+TGG | 0.582086 | 7.2:-73047193 | MS.gene79962:CDS |
| CGATTGGCCTTAGGGTTGAG+AGG | 0.589725 | 7.2:+73047093 | None:intergenic |
| ACGAAGGATGGCATGTGGAA+GGG | 0.591719 | 7.2:+73046458 | None:intergenic |
| GGTGCTAAGAGATGCCAAGA+TGG | 0.593241 | 7.2:+73045936 | None:intergenic |
| GATGGTTGGAACAGGACCTC+CGG | 0.593491 | 7.2:+73046195 | None:intergenic |
| AAGAGCTACGAATTGCCTGA+TGG | 0.595436 | 7.2:-73046255 | MS.gene79962:CDS |
| TGAGGCTCCTCTCAACCCTA+AGG | 0.595543 | 7.2:-73047100 | MS.gene79962:CDS |
| CGTCACACTGGTGTGATGGT+TGG | 0.597543 | 7.2:-73047303 | MS.gene79962:CDS |
| ACTGGTGTGATGGTTGGCAT+GGG | 0.600381 | 7.2:-73047297 | MS.gene79962:CDS |
| GATATCAGGAAAGACTTGTA+CGG | 0.601211 | 7.2:-73046105 | MS.gene79962:CDS |
| GATGGACAGGTGATCACCAT+CGG | 0.601892 | 7.2:-73046237 | MS.gene79962:CDS |
| TACGCCAGTGGTCGTACCAC+CGG | 0.602745 | 7.2:-73046991 | MS.gene79962:intron |
| TTGTGACAATGGAACTGGAA+TGG | 0.606936 | 7.2:-73047848 | MS.gene79962:CDS |
| GTTCCATTGTCACAAACAAG+AGG | 0.610975 | 7.2:+73047856 | None:intergenic |
| ATAGTAGACGATGGCAGACG+CGG | 0.612637 | 7.2:-73047890 | None:intergenic |
| ACATGGAATTGTTAGCAACT+GGG | 0.615052 | 7.2:-73047202 | MS.gene79962:CDS |
| AACAAAACAAACCTGCTGGA+AGG | 0.616042 | 7.2:+73045915 | None:intergenic |
| GAGCCTCAGTTAAAAGCACT+GGG | 0.616759 | 7.2:+73047115 | None:intergenic |
| CTTCATGATGGAGTTGTATG+TGG | 0.618935 | 7.2:+73046137 | None:intergenic |
| CATTGCTGACAGAATGAGCA+AGG | 0.623432 | 7.2:-73046043 | MS.gene79962:CDS |
| ATGCTGGGAAACACAGCACG+AGG | 0.626971 | 7.2:+73047339 | None:intergenic |
| GAGCTCTTGCTCATAGTCAA+GGG | 0.628126 | 7.2:+73046308 | None:intergenic |
| GTAGGTCGTCCTCGTCACAC+TGG | 0.629317 | 7.2:-73047315 | MS.gene79962:CDS |
| GGTAACATTGTGCTTTCAGG+AGG | 0.633227 | 7.2:-73046084 | MS.gene79962:CDS |
| GCTGGGAAACACAGCACGAG+GGG | 0.634384 | 7.2:+73047341 | None:intergenic |
| GTTCTTTCACTGTACGCCAG+TGG | 0.634859 | 7.2:-73047003 | MS.gene79962:CDS |
| TGCTGGGAAACACAGCACGA+GGG | 0.642727 | 7.2:+73047340 | None:intergenic |
| GTAGACGATGGCAGACGCGG+AGG | 0.650281 | 7.2:-73047887 | None:intergenic |
| ACTGGCGTACAGTGAAAGAA+CGG | 0.656927 | 7.2:+73047005 | None:intergenic |
| TCAAGACGAAGGATGGCATG+TGG | 0.658783 | 7.2:+73046453 | None:intergenic |
| ACCATCACACCAGTGTGACG+AGG | 0.660573 | 7.2:+73047306 | None:intergenic |
| AGATGCATATGTTGGTGATG+AGG | 0.661651 | 7.2:-73047268 | MS.gene79962:CDS |
| CCATACTGTCCCTATCTACG+AGG | 0.672368 | 7.2:-73046487 | MS.gene79962:CDS |
| CAATTCGTAGCTCTTCTCGA+CGG | 0.674512 | 7.2:+73046263 | None:intergenic |
| GACCAGCCAGATCAAGACGA+AGG | 0.686380 | 7.2:+73046442 | None:intergenic |
| AATAGCAACATACATAGCAG+GGG | 0.691158 | 7.2:+73047032 | None:intergenic |
| CGAGCGTTTCAGATGTCCGG+AGG | 0.696555 | 7.2:-73046211 | MS.gene79962:CDS |
| AGTGCAGATGTGGATTGCAA+AGG | 0.699053 | 7.2:-73045367 | MS.gene79962:intron |
| GATGAGGCACAGTCTAAGAG+GGG | 0.706688 | 7.2:-73047252 | MS.gene79962:CDS |
| TAACAATTCCATGTTCAATG+GGG | 0.707657 | 7.2:+73047211 | None:intergenic |
| CATACTGTCCCTATCTACGA+GGG | 0.714771 | 7.2:-73046486 | MS.gene79962:CDS |
| AAGTAGCATGAAGATCAAGG+TGG | 0.766332 | 7.2:-73046001 | MS.gene79962:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATATATAATGTTATTATA+TGG | - | chr7.2:73047327-73047346 | MS.gene79962:CDS | 10.0% |
| !! | AATATAAAGCAAAACAATTT+AGG | + | chr7.2:73046503-73046522 | None:intergenic | 15.0% |
| !!! | AAAACTTAATAAGCTATTTT+TGG | - | chr7.2:73047515-73047534 | MS.gene79962:intron | 15.0% |
| !!! | ATTGAGAATTTTCAAATTTA+GGG | + | chr7.2:73047396-73047415 | None:intergenic | 15.0% |
| !!! | GATTAGATTTTTTATTATGT+GGG | - | chr7.2:73046250-73046269 | MS.gene79962:CDS | 15.0% |
| !!! | TATTAGCTTATAATTTTGTT+AGG | - | chr7.2:73045594-73045613 | MS.gene79962:intron | 15.0% |
| !!! | TGATTAGATTTTTTATTATG+TGG | - | chr7.2:73046249-73046268 | MS.gene79962:CDS | 15.0% |
| !! | AAAAGGATTAATATGATAGA+AGG | - | chr7.2:73047722-73047741 | MS.gene79962:intron | 20.0% |
| !! | AAGTTTAGGTAATAATTCAT+TGG | + | chr7.2:73045469-73045488 | None:intergenic | 20.0% |
| !! | ATTAAGCTAATTATTCAAAG+TGG | - | chr7.2:73047682-73047701 | MS.gene79962:intron | 20.0% |
| !! | TTAAGCTAATTATTCAAAGT+GGG | - | chr7.2:73047683-73047702 | MS.gene79962:intron | 20.0% |
| !! | TTGAAAATGAAAATGTTGTT+AGG | - | chr7.2:73046465-73046484 | MS.gene79962:CDS | 20.0% |
| !!! | AGAAATGATCTTATAGTTTT+TGG | - | chr7.2:73045381-73045400 | MS.gene79962:intron | 20.0% |
| !!! | GATTGAGAATTTTCAAATTT+AGG | + | chr7.2:73047397-73047416 | None:intergenic | 20.0% |
| !!! | TTCTATCATATTAATCCTTT+TGG | + | chr7.2:73047723-73047742 | None:intergenic | 20.0% |
| !!! | TTTATAAATTCCGAGTTTTA+GGG | + | chr7.2:73047368-73047387 | None:intergenic | 20.0% |
| !!! | TTTTATAAATTCCGAGTTTT+AGG | + | chr7.2:73047369-73047388 | None:intergenic | 20.0% |
| ! | AAATGTTGTTAGGAAGTAAA+TGG | - | chr7.2:73046475-73046494 | MS.gene79962:CDS | 25.0% |
| ! | AAGTGCTTGTATATAAGTTA+TGG | + | chr7.2:73047631-73047650 | None:intergenic | 25.0% |
| ! | AATGTTGTTAGGAAGTAAAT+GGG | - | chr7.2:73046476-73046495 | MS.gene79962:CDS | 25.0% |
| ! | AGACTCAATATATATTCCAT+TGG | - | chr7.2:73047788-73047807 | MS.gene79962:intron | 25.0% |
| ! | ATTCTCTATCATAATTGAAG+AGG | - | chr7.2:73046393-73046412 | MS.gene79962:CDS | 25.0% |
| ! | CAAAATCTTCATCAAGAAAT+CGG | + | chr7.2:73046790-73046809 | None:intergenic | 25.0% |
| ! | CTTATATACAAGCACTTATA+TGG | - | chr7.2:73047634-73047653 | MS.gene79962:intron | 25.0% |
| !! | TATATTGAGTCTGAAATTGT+AGG | + | chr7.2:73047780-73047799 | None:intergenic | 25.0% |
| !!! | AATTTCTCTAGGATAACTTA+TGG | - | chr7.2:73047490-73047509 | MS.gene79962:intron | 25.0% |
| !!! | CTTTTGTTTTTGTCAACTTT+GGG | - | chr7.2:73045505-73045524 | MS.gene79962:intron | 25.0% |
| !!! | TTATAAATTCCGAGTTTTAG+GGG | + | chr7.2:73047367-73047386 | None:intergenic | 25.0% |
| AAACTTAATGCTATCAACCA+TGG | + | chr7.2:73045705-73045724 | None:intergenic | 30.0% | |
| AAAGTTCATCACATGACATA+TGG | + | chr7.2:73046627-73046646 | None:intergenic | 30.0% | |
| AAGTTATCCTAGAGAACTTA+TGG | + | chr7.2:73047548-73047567 | None:intergenic | 30.0% | |
| AAGTTGACAAAAACAAAAGG+TGG | + | chr7.2:73045504-73045523 | None:intergenic | 30.0% | |
| AGTTGACAAAAACAAAAGGT+GGG | + | chr7.2:73045503-73045522 | None:intergenic | 30.0% | |
| ATTATATGGCATTGCTAACT+AGG | - | chr7.2:73047341-73047360 | MS.gene79962:CDS | 30.0% | |
| CCAAAGTTGACAAAAACAAA+AGG | + | chr7.2:73045507-73045526 | None:intergenic | 30.0% | |
| CCTAATTGAGTTTGAGAAAA+TGG | - | chr7.2:73045791-73045810 | MS.gene79962:intron | 30.0% | |
| CTAACAATTCCATGTTCAAT+GGG | + | chr7.2:73045990-73046009 | None:intergenic | 30.0% | |
| CTTATTTCCATAAGTTCTCT+AGG | - | chr7.2:73047538-73047557 | MS.gene79962:intron | 30.0% | |
| GAGAAAGAGATAAACAAGAA+AGG | + | chr7.2:73047308-73047327 | None:intergenic | 30.0% | |
| GCAGTTAAAAAATGACTTAC+CGG | + | chr7.2:73046228-73046247 | None:intergenic | 30.0% | |
| TAACAATTCCATGTTCAATG+GGG | + | chr7.2:73045989-73046008 | None:intergenic | 30.0% | |
| TAAGACAATTTCAGAGACTA+AGG | - | chr7.2:73047431-73047450 | MS.gene79962:intron | 30.0% | |
| TATCCTAGAGAAATTATGTC+AGG | + | chr7.2:73047485-73047504 | None:intergenic | 30.0% | |
| TCATAATGCAGTACTTTAGT+TGG | - | chr7.2:73045738-73045757 | MS.gene79962:intron | 30.0% | |
| TGTGAGAAGTAGGATTTATT+CGG | - | chr7.2:73046568-73046587 | MS.gene79962:intron | 30.0% | |
| TTACCTGACATAATTTCTCT+AGG | - | chr7.2:73047479-73047498 | MS.gene79962:intron | 30.0% | |
| ! | AGTTTTACTTAGTATGTCTG+TGG | + | chr7.2:73046446-73046465 | None:intergenic | 30.0% |
| ! | CCATTTTCTCAAACTCAATT+AGG | + | chr7.2:73045794-73045813 | None:intergenic | 30.0% |
| ! | GGATTCTGATTTATCTTTTC+AGG | - | chr7.2:73045812-73045831 | MS.gene79962:intron | 30.0% |
| !! | AAGAAAAGTGTCATTACCAA+TGG | + | chr7.2:73047807-73047826 | None:intergenic | 30.0% |
| !!! | CCTTTTGTTTTTGTCAACTT+TGG | - | chr7.2:73045504-73045523 | MS.gene79962:intron | 30.0% |
| !!! | TGATCTTATAGTTTTTGGCA+TGG | - | chr7.2:73045386-73045405 | MS.gene79962:intron | 30.0% |
| AACATGGAATTGTTAGCAAC+TGG | - | chr7.2:73045994-73046013 | MS.gene79962:CDS | 35.0% | |
| AAGGCAGAATATGATGAATC+TGG | - | chr7.2:73047849-73047868 | MS.gene79962:CDS | 35.0% | |
| AATAGCAACATACATAGCAG+GGG | + | chr7.2:73046168-73046187 | None:intergenic | 35.0% | |
| ACATGGAATTGTTAGCAACT+GGG | - | chr7.2:73045995-73046014 | MS.gene79962:CDS | 35.0% | |
| AGAAAATACAGTGTCTGGAT+TGG | - | chr7.2:73047233-73047252 | MS.gene79962:CDS | 35.0% | |
| CTTAAATACCCCATTGAACA+TGG | - | chr7.2:73045978-73045997 | MS.gene79962:CDS | 35.0% | |
| GAATAGCAACATACATAGCA+GGG | + | chr7.2:73046169-73046188 | None:intergenic | 35.0% | |
| GATATCAGGAAAGACTTGTA+CGG | - | chr7.2:73047092-73047111 | MS.gene79962:CDS | 35.0% | |
| GCTAACAATTCCATGTTCAA+TGG | + | chr7.2:73045991-73046010 | None:intergenic | 35.0% | |
| GGTCAAAAAGATGCATATGT+TGG | - | chr7.2:73045921-73045940 | MS.gene79962:intron | 35.0% | |
| GTTAAAAAATGACTTACCGG+TGG | + | chr7.2:73046225-73046244 | None:intergenic | 35.0% | |
| TGAATAGCAACATACATAGC+AGG | + | chr7.2:73046170-73046189 | None:intergenic | 35.0% | |
| ! | ACACTAGAGAGAATGCATTT+TGG | + | chr7.2:73046363-73046382 | None:intergenic | 35.0% |
| ! | CACTGACTGTTAAGATGAAT+GGG | - | chr7.2:73046532-73046551 | MS.gene79962:intron | 35.0% |
| ! | GATTCTCGATTTGATAACCA+TGG | - | chr7.2:73045685-73045704 | MS.gene79962:intron | 35.0% |
| ! | TATGTTTTCTGTCTCTATGC+AGG | - | chr7.2:73046657-73046676 | MS.gene79962:intron | 35.0% |
| ! | TCACTGACTGTTAAGATGAA+TGG | - | chr7.2:73046531-73046550 | MS.gene79962:intron | 35.0% |
| ! | TCCTTTTGGATCAGTCATTT+AGG | + | chr7.2:73047709-73047728 | None:intergenic | 35.0% |
| ! | TGCTATGTATGTTGCTATTC+AGG | - | chr7.2:73046169-73046188 | MS.gene79962:CDS | 35.0% |
| ! | TTTTCTTATGAGTGCAGATG+TGG | - | chr7.2:73047820-73047839 | MS.gene79962:intron | 35.0% |
| !! | TCTGATTTATCTTTTCAGGC+TGG | - | chr7.2:73045816-73045835 | MS.gene79962:intron | 35.0% |
| !!! | ATGAAGATTTTGACTGAACG+TGG | - | chr7.2:73046798-73046817 | MS.gene79962:intron | 35.0% |
| AACAAAACAAACCTGCTGGA+AGG | + | chr7.2:73047285-73047304 | None:intergenic | 40.0% | |
| AACACGAAGCTCATTGTAGA+AGG | + | chr7.2:73046048-73046067 | None:intergenic | 40.0% | |
| AAGGAACAAAACAAACCTGC+TGG | + | chr7.2:73047289-73047308 | None:intergenic | 40.0% | |
| AAGTAGCATGAAGATCAAGG+TGG | - | chr7.2:73047196-73047215 | MS.gene79962:CDS | 40.0% | |
| AAGTAGCTTCTGTGAGAAGT+AGG | - | chr7.2:73046558-73046577 | MS.gene79962:intron | 40.0% | |
| ACCTTGATCTTCATGCTACT+TGG | + | chr7.2:73047197-73047216 | None:intergenic | 40.0% | |
| ATCAACATCGCACTTCATGA+TGG | + | chr7.2:73047075-73047094 | None:intergenic | 40.0% | |
| ATTGTGTTGGATTCTGGTGA+TGG | - | chr7.2:73046681-73046700 | MS.gene79962:intron | 40.0% | |
| CAATGGAACTGGAATGGTTA+AGG | - | chr7.2:73045355-73045374 | MS.gene79962:CDS | 40.0% | |
| CACTTTCTGTGGACAATTGA+TGG | + | chr7.2:73047876-73047895 | None:intergenic | 40.0% | |
| CCAACCATCTATGATAGGAA+TGG | - | chr7.2:73047016-73047035 | MS.gene79962:CDS | 40.0% | |
| CCATTCCTATCATAGATGGT+TGG | + | chr7.2:73047019-73047038 | None:intergenic | 40.0% | |
| CTATCATAGATGGTTGGAAC+AGG | + | chr7.2:73047013-73047032 | None:intergenic | 40.0% | |
| CTGAGAGAAAATACAGTGTC+TGG | - | chr7.2:73047228-73047247 | MS.gene79962:CDS | 40.0% | |
| CTGTTCCAACCATCTATGAT+AGG | - | chr7.2:73047011-73047030 | MS.gene79962:CDS | 40.0% | |
| CTTGTTTGTGACAATGGAAC+TGG | - | chr7.2:73045344-73045363 | MS.gene79962:CDS | 40.0% | |
| GACAAAAACAAAAGGTGGGT+TGG | + | chr7.2:73045499-73045518 | None:intergenic | 40.0% | |
| GAGCAAGGAAATTTCTGCTT+TGG | - | chr7.2:73047169-73047188 | MS.gene79962:CDS | 40.0% | |
| GCCTAAATGACTGATCCAAA+AGG | - | chr7.2:73047705-73047724 | MS.gene79962:intron | 40.0% | |
| GCTTCCATTCCTATCATAGA+TGG | + | chr7.2:73047023-73047042 | None:intergenic | 40.0% | |
| GGGTTGGATACACTAAGTTT+AGG | + | chr7.2:73045483-73045502 | None:intergenic | 40.0% | |
| GTTCCATTGTCACAAACAAG+AGG | + | chr7.2:73045344-73045363 | None:intergenic | 40.0% | |
| TACGGTAACATTGTGCTTTC+AGG | - | chr7.2:73047110-73047129 | MS.gene79962:CDS | 40.0% | |
| TCTGTGGCTAGAATGACATT+TGG | + | chr7.2:73046430-73046449 | None:intergenic | 40.0% | |
| TGAAGTGCGATGTTGATATC+AGG | - | chr7.2:73047078-73047097 | MS.gene79962:CDS | 40.0% | |
| TTGAGTCATCTTCTCACGAT+TGG | + | chr7.2:73046123-73046142 | None:intergenic | 40.0% | |
| TTGTGACAATGGAACTGGAA+TGG | - | chr7.2:73045349-73045368 | MS.gene79962:CDS | 40.0% | |
| ! | AAATACAGTGTCTGGATTGG+AGG | - | chr7.2:73047236-73047255 | MS.gene79962:CDS | 40.0% |
| ! | ACACTGTATTTTCTCTCAGG+TGG | + | chr7.2:73047227-73047246 | None:intergenic | 40.0% |
| ! | CAACCTCTTGTTTGTGACAA+TGG | - | chr7.2:73045338-73045357 | MS.gene79962:CDS | 40.0% |
| ! | CAGACACTGTATTTTCTCTC+AGG | + | chr7.2:73047230-73047249 | None:intergenic | 40.0% |
| ! | CCTTGATCTTCATGCTACTT+GGG | + | chr7.2:73047196-73047215 | None:intergenic | 40.0% |
| ! | CTTCATGATGGAGTTGTATG+TGG | + | chr7.2:73047063-73047082 | None:intergenic | 40.0% |
| ! | CTTGATCTTCATGCTACTTG+GGG | + | chr7.2:73047195-73047214 | None:intergenic | 40.0% |
| ! | TCTCTATGCAGGTATTGTGT+TGG | - | chr7.2:73046668-73046687 | MS.gene79962:intron | 40.0% |
| !! | AGATGCATATGTTGGTGATG+AGG | - | chr7.2:73045929-73045948 | MS.gene79962:CDS | 40.0% |
| AACAATTTCTCGCTCTGCTG+AGG | + | chr7.2:73046838-73046857 | None:intergenic | 45.0% | |
| AAGAGCTACGAATTGCCTGA+TGG | - | chr7.2:73046942-73046961 | MS.gene79962:intron | 45.0% | |
| ACTGGCGTACAGTGAAAGAA+CGG | + | chr7.2:73046195-73046214 | None:intergenic | 45.0% | |
| ATGATAGGAATGGAAGCAGC+AGG | - | chr7.2:73047026-73047045 | MS.gene79962:CDS | 45.0% | |
| CAATTCGTAGCTCTTCTCGA+CGG | + | chr7.2:73046937-73046956 | None:intergenic | 45.0% | |
| CATACTGTCCCTATCTACGA+GGG | - | chr7.2:73046711-73046730 | MS.gene79962:intron | 45.0% | |
| CATTGCTGACAGAATGAGCA+AGG | - | chr7.2:73047154-73047173 | MS.gene79962:CDS | 45.0% | |
| CCCAAGTAGCATGAAGATCA+AGG | - | chr7.2:73047193-73047212 | MS.gene79962:CDS | 45.0% | |
| CTAACTAGGCCCCTAAAACT+CGG | - | chr7.2:73047355-73047374 | MS.gene79962:CDS | 45.0% | |
| GAGCTCTTGCTCATAGTCAA+GGG | + | chr7.2:73046892-73046911 | None:intergenic | 45.0% | |
| GGTAACATTGTGCTTTCAGG+AGG | - | chr7.2:73047113-73047132 | MS.gene79962:CDS | 45.0% | |
| TCATTCTGTCAGCAATGCCT+GGG | + | chr7.2:73047151-73047170 | None:intergenic | 45.0% | |
| TGATGAGGCACAGTCTAAGA+GGG | - | chr7.2:73045944-73045963 | MS.gene79962:CDS | 45.0% | |
| ! | AGTGCAGATGTGGATTGCAA+AGG | - | chr7.2:73047830-73047849 | MS.gene79962:intron | 45.0% |
| ! | GCAGGTATTGTGTTGGATTC+TGG | - | chr7.2:73046675-73046694 | MS.gene79962:intron | 45.0% |
| !! | AAAAGCACTGGGTGTTCTTC+TGG | + | chr7.2:73046074-73046093 | None:intergenic | 45.0% |
| !! | AAAGCACTGGGTGTTCTTCT+GGG | + | chr7.2:73046073-73046092 | None:intergenic | 45.0% |
| !! | ACACCCAGTGCTTTTAACTG+AGG | - | chr7.2:73046079-73046098 | MS.gene79962:CDS | 45.0% |
| !! | ATCTTCTCACGATTGGCCTT+AGG | + | chr7.2:73046116-73046135 | None:intergenic | 45.0% |
| !! | GAGCCTCAGTTAAAAGCACT+GGG | + | chr7.2:73046085-73046104 | None:intergenic | 45.0% |
| !! | TCTTCTCACGATTGGCCTTA+GGG | + | chr7.2:73046115-73046134 | None:intergenic | 45.0% |
| !! | TCTTTTCAGGCTGGATTTGC+TGG | - | chr7.2:73045825-73045844 | MS.gene79962:intron | 45.0% |
| AATTTCTCGCTCTGCTGAGG+TGG | + | chr7.2:73046835-73046854 | None:intergenic | 50.0% | |
| ACGAAGGATGGCATGTGGAA+GGG | + | chr7.2:73046742-73046761 | None:intergenic | 50.0% | |
| ACTGGTGTGATGGTTGGCAT+GGG | - | chr7.2:73045900-73045919 | MS.gene79962:intron | 50.0% | |
| AGACGAGCGTTTCAGATGTC+CGG | - | chr7.2:73046983-73047002 | MS.gene79962:intron | 50.0% | |
| AGCCAGATCAAGACGAAGGA+TGG | + | chr7.2:73046754-73046773 | None:intergenic | 50.0% | |
| AGGGCATAACCCTCGTAGAT+AGG | + | chr7.2:73046723-73046742 | None:intergenic | 50.0% | |
| ATCCTTCGTCTTGATCTGGC+TGG | - | chr7.2:73046753-73046772 | MS.gene79962:intron | 50.0% | |
| ATCTCTTAGCACCTTCCAGC+AGG | - | chr7.2:73047271-73047290 | MS.gene79962:CDS | 50.0% | |
| ATGGTGATCACCTGTCCATC+AGG | + | chr7.2:73046960-73046979 | None:intergenic | 50.0% | |
| CCATACTGTCCCTATCTACG+AGG | - | chr7.2:73046710-73046729 | MS.gene79962:intron | 50.0% | |
| CCTCGTAGATAGGGACAGTA+TGG | + | chr7.2:73046713-73046732 | None:intergenic | 50.0% | |
| CGAGCTCTTGCTCATAGTCA+AGG | + | chr7.2:73046893-73046912 | None:intergenic | 50.0% | |
| CTCATTCTGTCAGCAATGCC+TGG | + | chr7.2:73047152-73047171 | None:intergenic | 50.0% | |
| GATGAGGCACAGTCTAAGAG+GGG | - | chr7.2:73045945-73045964 | MS.gene79962:CDS | 50.0% | |
| GATGGACAGGTGATCACCAT+CGG | - | chr7.2:73046960-73046979 | MS.gene79962:intron | 50.0% | |
| GCTGTGTTTCCCAGCATTGT+AGG | - | chr7.2:73045864-73045883 | MS.gene79962:intron | 50.0% | |
| GGGACGACATGGAAAAGATC+TGG | - | chr7.2:73046015-73046034 | MS.gene79962:CDS | 50.0% | |
| GGGCATAACCCTCGTAGATA+GGG | + | chr7.2:73046722-73046741 | None:intergenic | 50.0% | |
| GGTGCTAAGAGATGCCAAGA+TGG | + | chr7.2:73047264-73047283 | None:intergenic | 50.0% | |
| GTGATGAGGCACAGTCTAAG+AGG | - | chr7.2:73045943-73045962 | MS.gene79962:CDS | 50.0% | |
| GTTCTTTCACTGTACGCCAG+TGG | - | chr7.2:73046194-73046213 | MS.gene79962:CDS | 50.0% | |
| TCAAGACGAAGGATGGCATG+TGG | + | chr7.2:73046747-73046766 | None:intergenic | 50.0% | |
| TGCCATCCTTCGTCTTGATC+TGG | - | chr7.2:73046749-73046768 | MS.gene79962:intron | 50.0% | |
| TGTTAGCAACTGGGACGACA+TGG | - | chr7.2:73046004-73046023 | MS.gene79962:CDS | 50.0% | |
| ! | CTACGAATTGCCTGATGGAC+AGG | - | chr7.2:73046947-73046966 | MS.gene79962:intron | 50.0% |
| ! | CTGGATTGGAGGTTCCATCT+TGG | - | chr7.2:73047247-73047266 | MS.gene79962:CDS | 50.0% |
| ! | GGAGCCTCAGTTAAAAGCAC+TGG | + | chr7.2:73046086-73046105 | None:intergenic | 50.0% |
| !! | AAGCACTGGGTGTTCTTCTG+GGG | + | chr7.2:73046072-73046091 | None:intergenic | 50.0% |
| ACCATCACACCAGTGTGACG+AGG | + | chr7.2:73045894-73045913 | None:intergenic | 55.0% | |
| ACGAGGACGACCTACAATGC+TGG | + | chr7.2:73045877-73045896 | None:intergenic | 55.0% | |
| ATGCTGGGAAACACAGCACG+AGG | + | chr7.2:73045861-73045880 | None:intergenic | 55.0% | |
| CACTGGTGTGATGGTTGGCA+TGG | - | chr7.2:73045899-73045918 | MS.gene79962:intron | 55.0% | |
| CGAGGACGACCTACAATGCT+GGG | + | chr7.2:73045876-73045895 | None:intergenic | 55.0% | |
| CGTCACACTGGTGTGATGGT+TGG | - | chr7.2:73045894-73045913 | MS.gene79962:intron | 55.0% | |
| GACCAGCCAGATCAAGACGA+AGG | + | chr7.2:73046758-73046777 | None:intergenic | 55.0% | |
| GACGAAGGATGGCATGTGGA+AGG | + | chr7.2:73046743-73046762 | None:intergenic | 55.0% | |
| GATGGTTGGAACAGGACCTC+CGG | + | chr7.2:73047005-73047024 | None:intergenic | 55.0% | |
| GGAGGAACAACCATGTTCCC+AGG | - | chr7.2:73047131-73047150 | MS.gene79962:CDS | 55.0% | |
| GTCAGCAATGCCTGGGAACA+TGG | + | chr7.2:73047144-73047163 | None:intergenic | 55.0% | |
| TCCTCGTCACACTGGTGTGA+TGG | - | chr7.2:73045890-73045909 | MS.gene79962:intron | 55.0% | |
| TGAGGCTCCTCTCAACCCTA+AGG | - | chr7.2:73046097-73046116 | MS.gene79962:CDS | 55.0% | |
| TGCTGGGAAACACAGCACGA+GGG | + | chr7.2:73045860-73045879 | None:intergenic | 55.0% | |
| ! | TCTGAAACGCTCGTCTCCGA+TGG | + | chr7.2:73046979-73046998 | None:intergenic | 55.0% |
| !! | CGATTGGCCTTAGGGTTGAG+AGG | + | chr7.2:73046107-73046126 | None:intergenic | 55.0% |
| AGCAAGAGCTCGAGACAGCC+AGG | - | chr7.2:73046901-73046920 | MS.gene79962:intron | 60.0% | |
| CGAGCGTTTCAGATGTCCGG+AGG | - | chr7.2:73046986-73047005 | MS.gene79962:intron | 60.0% | |
| CTTACCGGTGGTACGACCAC+TGG | + | chr7.2:73046213-73046232 | None:intergenic | 60.0% | |
| GCTCTTCTCGACGGATGAGC+TGG | + | chr7.2:73046928-73046947 | None:intergenic | 60.0% | |
| GCTGGGAAACACAGCACGAG+GGG | + | chr7.2:73045859-73045878 | None:intergenic | 60.0% | |
| GTAGGTCGTCCTCGTCACAC+TGG | - | chr7.2:73045882-73045901 | MS.gene79962:intron | 60.0% | |
| TACGCCAGTGGTCGTACCAC+CGG | - | chr7.2:73046206-73046225 | MS.gene79962:CDS | 60.0% | |
| CTCGACGGATGAGCTGGTCC+TGG | + | chr7.2:73046922-73046941 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 73045317 | 73047902 | 73045317 | ID=MS.gene79962 |
| chr7.2 | mRNA | 73045317 | 73047902 | 73045317 | ID=MS.gene79962.t1;Parent=MS.gene79962 |
| chr7.2 | exon | 73047843 | 73047902 | 73047843 | ID=MS.gene79962.t1.exon1;Parent=MS.gene79962.t1 |
| chr7.2 | CDS | 73047843 | 73047902 | 73047843 | ID=cds.MS.gene79962.t1;Parent=MS.gene79962.t1 |
| chr7.2 | exon | 73046992 | 73047385 | 73046992 | ID=MS.gene79962.t1.exon2;Parent=MS.gene79962.t1 |
| chr7.2 | CDS | 73046992 | 73047385 | 73046992 | ID=cds.MS.gene79962.t1;Parent=MS.gene79962.t1 |
| chr7.2 | exon | 73045927 | 73046540 | 73045927 | ID=MS.gene79962.t1.exon3;Parent=MS.gene79962.t1 |
| chr7.2 | CDS | 73045927 | 73046540 | 73045927 | ID=cds.MS.gene79962.t1;Parent=MS.gene79962.t1 |
| chr7.2 | exon | 73045317 | 73045382 | 73045317 | ID=MS.gene79962.t1.exon4;Parent=MS.gene79962.t1 |
| chr7.2 | CDS | 73045317 | 73045382 | 73045317 | ID=cds.MS.gene79962.t1;Parent=MS.gene79962.t1 |
| Gene Sequence |
| Protein sequence |
